No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G01516 AT3G01516 AT5G14690 AT5G14690 |
| fragaria_vesca | FvH4_6g50860 |
| malus_domestica | MD09G1031300.v1.1 MD17G1033200.v1.1 |
| prunus_persica | Prupe.3G286300_v2.0.a1 |
| pyrus_communis | pycom111g02500 |
| rosa_chinensis | RchiOBHm_Chr2g0172251 |
| rosa_laevigata | RLG00000014670 |
| rosa_multiflora | Rmu_sc0009513.1_g000004 Rmu_sc0024549.1_g000007 Rmu_sc0041056.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00080030 Rroxscaffold_2G00082460 |
| rosa_rugosa | Rorug02G0558100 |
| rosa_samantha | Rh2CG613700 Rh2DG661600 Rh4DG100700 Rh5AG268800 Rh5AG346300 Rh5BG357000 Rh5DG372400 Rh7AG115100 Rh7CG120300 |
| rosa_wichuraiana | Rw2G052420 Rw5G032700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 229 |
| Acc36I | ACCTGC | 1 cut(s) | 229 |
| AccB1I | GGYRCC | 1 cut(s) | 217 |
| AclWI | GGATC | 2 cut(s) | 64, 239 |
| AcsI | RAATTY | 1 cut(s) | 37 |
| AluBI | AGCT | 1 cut(s) | 116 |
| AluI | AGCT | 1 cut(s) | 116 |
| AlwI | GGATC | 2 cut(s) | 64, 239 |
| AoxI | GGCC | 1 cut(s) | 80 |
| ApeKI | GCWGC | 1 cut(s) | 116 |
| ApoI | RAATTY | 1 cut(s) | 37 |
| AspS9I | GGNCC | 1 cut(s) | 80 |
| BanI | GGYRCC | 1 cut(s) | 217 |
| BbvCI | CCTCAGC | 1 cut(s) | 171 |
| BbvI | GCAGC | 1 cut(s) | 103 |
| BccI | CCATC | 3 cut(s) | 8, 46, 154 |
| BclI | TGATCA | 1 cut(s) | 67 |
| BfuAI | ACCTGC | 1 cut(s) | 229 |
| BisI | GCNGC | 1 cut(s) | 117 |
| BlsI | GCNGC | 1 cut(s) | 118 |
| BmgT120I | GGNCC | 1 cut(s) | 80 |
| BmiI | GGNNCC | 1 cut(s) | 219 |
| BmsI | GCATC | 2 cut(s) | 128, 200 |
| Bpu10I | CCTNAGC | 1 cut(s) | 171 |
| BsaBI | GATNNNNATC | 1 cut(s) | 66 |
| Bse1I | ACTGG | 1 cut(s) | 239 |
| Bse8I | GATNNNNATC | 1 cut(s) | 66 |
| BseJI | GATNNNNATC | 1 cut(s) | 66 |
| BseMII | CTCAG | 1 cut(s) | 162 |
| BseNI | ACTGG | 1 cut(s) | 239 |
| BseXI | GCAGC | 1 cut(s) | 103 |
| BshFI | GGCC | 1 cut(s) | 82 |
| BshNI | GGYRCC | 1 cut(s) | 217 |
| BsnI | GGCC | 1 cut(s) | 82 |
| Bsp143I | GATC | 3 cut(s) | 56, 67, 231 |
| BspANI | GGCC | 1 cut(s) | 82 |
| BspCNI | CTCAG | 1 cut(s) | 163 |
| BspLI | GGNNCC | 1 cut(s) | 219 |
| BspMI | ACCTGC | 1 cut(s) | 229 |
| BspPI | GGATC | 2 cut(s) | 64, 239 |
| BspT107I | GGYRCC | 1 cut(s) | 217 |
| BsrI | ACTGG | 1 cut(s) | 239 |
| BssMI | GATC | 3 cut(s) | 56, 67, 231 |
| Bst6I | CTCTTC | 1 cut(s) | 200 |
| BstDEI | CTNAG | 1 cut(s) | 171 |
| BstKTI | GATC | 3 cut(s) | 59, 70, 234 |
| BstMBI | GATC | 3 cut(s) | 56, 67, 231 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 244 |
| BstV1I | GCAGC | 1 cut(s) | 103 |
| BstX2I | RGATCY | 1 cut(s) | 56 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 110 |
| BstYI | RGATCY | 1 cut(s) | 56 |
| BsuRI | GGCC | 1 cut(s) | 82 |
| BtsIMutI | CAGTG | 1 cut(s) | 246 |
| BveI | ACCTGC | 1 cut(s) | 229 |
| Cfr13I | GGNCC | 1 cut(s) | 80 |
| CviAII | CATG | 1 cut(s) | 71 |
| CviJI | RGCY | 3 cut(s) | 82, 116, 238 |
| CviKI_1 | RGCY | 3 cut(s) | 82, 116, 238 |
| DdeI | CTNAG | 1 cut(s) | 171 |
| DpnI | GATC | 3 cut(s) | 58, 69, 233 |
| DpnII | GATC | 3 cut(s) | 56, 67, 231 |
| DraI | TTTAAA | 1 cut(s) | 36 |
| Eam1104I | CTCTTC | 1 cut(s) | 200 |
| EarI | CTCTTC | 1 cut(s) | 200 |
| FaeI | CATG | 1 cut(s) | 74 |
| FaiI | YATR | 4 cut(s) | 72, 98, 168, 203 |
| FatI | CATG | 1 cut(s) | 70 |
| FbaI | TGATCA | 1 cut(s) | 67 |
| Fnu4HI | GCNGC | 1 cut(s) | 117 |
| Fsp4HI | GCNGC | 1 cut(s) | 117 |
| GluI | GCNGC | 1 cut(s) | 117 |
| HaeIII | GGCC | 1 cut(s) | 82 |
| Hin1II | CATG | 1 cut(s) | 74 |
| HinfI | GANTC | 1 cut(s) | 92 |
| Hpy188I | TCNGA | 1 cut(s) | 61 |
| HpyAV | CCTTC | 1 cut(s) | 222 |
| HpyCH4IV | ACGT | 1 cut(s) | 9 |
| HpyCH4V | TGCA | 4 cut(s) | 26, 119, 213, 224 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 244 |
| HpyF3I | CTNAG | 1 cut(s) | 171 |
| HpySE526I | ACGT | 1 cut(s) | 9 |
| Hsp92II | CATG | 1 cut(s) | 74 |
| Ksp22I | TGATCA | 1 cut(s) | 67 |
| Kzo9I | GATC | 3 cut(s) | 56, 67, 231 |
| LmnI | GCTCC | 1 cut(s) | 113 |
| LpnPI | CCDG | 1 cut(s) | 234 |
| Lsp1109I | GCAGC | 1 cut(s) | 103 |
| LweI | GCATC | 2 cut(s) | 128, 200 |
| MaeII | ACGT | 1 cut(s) | 9 |
| MaeIII | GTNAC | 1 cut(s) | 181 |
| MalI | GATC | 3 cut(s) | 58, 69, 233 |
| MboI | GATC | 3 cut(s) | 56, 67, 231 |
| MboII | GAAGA | 3 cut(s) | 169, 202, 217 |
| MfeI | CAATTG | 1 cut(s) | 45 |
| MflI | RGATCY | 1 cut(s) | 56 |
| MluCI | AATT | 2 cut(s) | 37, 45 |
| MlyI | GAGTC | 1 cut(s) | 86 |
| MnlI | CCTC | 1 cut(s) | 166 |
| MseI | TTAA | 3 cut(s) | 35, 75, 253 |
| MslI | CAYNNNNRTG | 1 cut(s) | 75 |
| MunI | CAATTG | 1 cut(s) | 45 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 244 |
| NdeII | GATC | 3 cut(s) | 56, 67, 231 |
| NlaIII | CATG | 1 cut(s) | 74 |
| NlaIV | GGNNCC | 1 cut(s) | 219 |
| PaqCI | CACCTGC | 1 cut(s) | 229 |
| PkrI | GCNGC | 1 cut(s) | 118 |
| PleI | GAGTC | 1 cut(s) | 86 |
| PpsI | GAGTC | 1 cut(s) | 86 |
| PspN4I | GGNNCC | 1 cut(s) | 219 |
| PspPI | GGNCC | 1 cut(s) | 80 |
| PsuI | RGATCY | 1 cut(s) | 56 |
| RseI | CAYNNNNRTG | 1 cut(s) | 75 |
| SaqAI | TTAA | 3 cut(s) | 35, 75, 253 |
| SatI | GCNGC | 1 cut(s) | 117 |
| Sau3AI | GATC | 3 cut(s) | 56, 67, 231 |
| Sau96I | GGNCC | 1 cut(s) | 80 |
| SchI | GAGTC | 1 cut(s) | 86 |
| SetI | ASST | 5 cut(s) | 12, 118, 177, 223, 253 |
| SfaNI | GCATC | 2 cut(s) | 128, 200 |
| SgeI | CNNG | 8 cut(s) | 41, 83, 116, 226, 233, 237, 247, 251 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 75 |
| Sse9I | AATT | 2 cut(s) | 37, 45 |
| TaiI | ACGT | 1 cut(s) | 12 |
| TasI | AATT | 2 cut(s) | 37, 45 |
| Tru1I | TTAA | 3 cut(s) | 35, 75, 253 |
| Tru9I | TTAA | 3 cut(s) | 35, 75, 253 |
| TscAI | CASTG | 1 cut(s) | 246 |
| TseI | GCWGC | 1 cut(s) | 116 |
| TspDTI | ATGAA | 2 cut(s) | 17, 218 |
| TspRI | CASTG | 1 cut(s) | 246 |
| XapI | RAATTY | 1 cut(s) | 37 |