AT5G17990

anthranilate phosphoribosyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
5957080 .. 5960201
3122 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G17990.1

Sequence Viewer

Length: 1335 bp
ATGGTTATTGCGGTGGCGACGACGAGCTCCATTGTTTCCGGAATCAAGCTTTCAGGGATCTTAACTTCGTTCAACGCCGTAGATGATGCGTCCAGTAGTTGCGGAAGAAGCAACTTGACCGGAGTTAGAATTTTTCCGACATTGAGTCGGCGACGATTCTCATCGATCGGAGCTGTTTCCCCAATTCGTGGGGATGCTCAATCTTCCTTTAGTCGCAGCTCTTTCGCTTGCTCTCAGAATCTCGGTTTGAGCGGTGGATTTAGTGCAGCTGAAGCTCTGCCACCTGCTTGTGCAAATGCTAGCCCTTCTTCCATTAAATCTTTCAACCAGTTGATTGAAACCTTGATTGATCGGGTTGATCTATCTGAAACTGAGGCTGAATCATCTCTTGAGTTTTTGCTGAATGAGGCAAACGAGGCGCTGATCAGTGCCTTTCTAGTTCTTCTGAGAGCTAAAGGAGAGACATACGAAGAGATTGTGGGGTTAGCTAGGGCAATGATGAAGCATGCCAGGAAAGTGGAAGGATTAGTTGATGCTGTGGACATAGTTGGAACAGGTGGTGATGGAGCAAACACAGTCAATATATCAACTGGATCTTCAATACTTGCTGCAGCTTGTGGTGCAAAAGTAGCAAAGCAAGGGAATCGTTCAAGTTCTTCTGCTTGTGGAAGTGCTGATGTACTAGAGGCACTAGGAGTGGTTCTGGACTTGGGACCAGAGGGCATTAAAAGATGTGTTGAAGAAGGGGGGATCGGTTTTATGATGTCACCAATGTATCATCCAGCTATGAAGATCGTTGGTCCTGTTCGGAAAAAGCTTAAAATTAAAACTGTTTTTAACATATTGGGACCTATGCTTAATCCTGCTAGAGTTTCTTATGCTGTCGTTGGTGTATACCACAAAGATCTGGTTGTTAAGATGGCAAAGGCACTGCAACGATTTGGAATGAAAAGAGCACTGGTGGTTCATTCATGTGGTCTAGACGAAATGAGTCCGTTAGGAGGAGGACTAGTTTATGATGTAACTCCGGAAAAGATCGAAGAATTCTCATTCGACCCATTGGACTTTGGTATTCCTCGTTGTACTCTTGAGGATTTGCGAGGTGGAGGTCCAGACTACAATGCGGATGTGCTAAGACGTGTGCTTTCAGGGGAAAGTGGAGCAATTGCGGATTCATTGATCCTAAACGCAGCTGCAGCTCTTCTGGTTAGCAACCGAGTTCAAACGCTAGCTGAAGGAGTAACCGTGGCACGTGAAGTACAATCGTCTGGGAAAGCTATCAAGACGCTTGATTCTTGGATAAACATCTCAAACTTAGCTCAGAAATCTCAGTGA

Protein Analysis

444

Amino Acids

46.52

Weight (kDa)

6.91

Isoelectric Point (pI)

52.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glycos_trans_3N PF02885 110 - 170 6.3e-16 Glycosyl transferase family, helical bundle domain
Glycos_transf_3 PF00591 178 - 426 3.4e-102 Glycosyl transferase family, a/b domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 292
Acc36I ACCTGC 1 cut(s) 292
AccB7I CCANNNNNTGG 1 cut(s) 188
AccBSI CCGCTC 1 cut(s) 252
AccI GTMKAC 1 cut(s) 894
AccIII TCCGGA 2 cut(s) 38, 1027
AciI CCGC 5 cut(s) 11, 102, 252, 1124, 1169
AclWI GGATC 4 cut(s) 65, 601, 758, 1174
AcsI RAATTY 2 cut(s) 129, 1043
AcuI CTGAAG 2 cut(s) 291, 1254
AcvI CACGTG 1 cut(s) 1253
AfaI GTAC 3 cut(s) 681, 1084, 1260
AfiI CCNNNNNNNGG 2 cut(s) 188, 1001
AflIII ACRYGT 1 cut(s) 1138
AgsI TTSAA 7 cut(s) 73, 325, 338, 600, 651, 740, 1223
AhdI GACNNNNNGTC 1 cut(s) 144
AhlI ACTAGT 1 cut(s) 1009
AjiI CACGTC 1 cut(s) 1139
AjnI CCWGG 1 cut(s) 509
Alw21I GWGCWC 2 cut(s) 29, 958
Alw26I GTCTC 1 cut(s) 455
AlwI GGATC 4 cut(s) 65, 601, 758, 1174
Aor13HI TCCGGA 2 cut(s) 38, 1027
ApeKI GCWGC 7 cut(s) 216, 266, 608, 611, 1190, 1193, 1196
ApoI RAATTY 2 cut(s) 129, 1043
AspLEI GCGC 1 cut(s) 421
AspS9I GGNCC 4 cut(s) 713, 800, 848, 1109
AsuHPI GGTGA 2 cut(s) 572, 759
AsuNHI GCTAGC 2 cut(s) 299, 1228
AvaII GGWCC 4 cut(s) 713, 800, 848, 1109
BaeI ACNNNNGTAYC 2 cut(s) 758, 791
BanII GRGCYC 1 cut(s) 29
BbrPI CACGTG 1 cut(s) 1253
Bbv12I GWGCWC 2 cut(s) 29, 958
BbvI GCAGC 7 cut(s) 228, 278, 595, 623, 1180, 1202, 1208
BccI CCATC 2 cut(s) 557, 913
BceAI ACGGC 1 cut(s) 62
BcgI CGANNNNNNTGC 4 cut(s) 205, 239, 626, 660
BciT130I CCWGG 1 cut(s) 511
BclI TGATCA 1 cut(s) 423
BcoDI GTCTC 1 cut(s) 455
BcuI ACTAGT 1 cut(s) 1009
BfaI CTAG 9 cut(s) 300, 437, 489, 683, 692, 867, 980, 1010, 1229
BfmI CTRYAG 2 cut(s) 609, 1194
BfoI RGCGCY 1 cut(s) 422
BfuAI ACCTGC 1 cut(s) 292
BglII AGATCT 1 cut(s) 904
BisI GCNGC 7 cut(s) 217, 267, 609, 612, 1191, 1194, 1197
BlsI GCNGC 7 cut(s) 218, 268, 610, 613, 1192, 1195, 1198
Bme1390I CCNGG 1 cut(s) 511
Bme18I GGWCC 4 cut(s) 713, 800, 848, 1109
BmeRI GACNNNNNGTC 1 cut(s) 144
BmgBI CACGTC 1 cut(s) 1139
BmgT120I GGNCC 4 cut(s) 713, 800, 848, 1109
BmiI GGNNCC 2 cut(s) 714, 849
BmrFI CCNGG 1 cut(s) 511
BmsI GCATC 3 cut(s) 76, 184, 523
BmtI GCTAGC 2 cut(s) 303, 1232
BpuEI CTTGAG 2 cut(s) 410, 1109
Bsa29I ATCGAT 1 cut(s) 164
BsaAI YACGTR 1 cut(s) 1253
BsaBI GATNNNNATC 2 cut(s) 160, 1304
BsaJI CCNNGG 1 cut(s) 1245
BsaWI WCCGGW 3 cut(s) 38, 119, 1027
BsaXI ACNNNNNCTCC 4 cut(s) 996, 1026, 1230, 1260
Bsc4I CCNNNNNNNGG 2 cut(s) 188, 1001
Bse1I ACTGG 4 cut(s) 93, 328, 595, 963
Bse3DI GCAATG 1 cut(s) 501
Bse8I GATNNNNATC 2 cut(s) 160, 1304
BseAI TCCGGA 2 cut(s) 38, 1027
BseBI CCWGG 1 cut(s) 511
BseCI ATCGAT 1 cut(s) 164
BseDI CCNNGG 1 cut(s) 1245
BseGI GGATG 3 cut(s) 199, 778, 1132
BseJI GATNNNNATC 2 cut(s) 160, 1304
BseLI CCNNNNNNNGG 2 cut(s) 188, 1001
BseMI GCAATG 1 cut(s) 501
BseMII CTCAG 4 cut(s) 248, 363, 437, 1334
BseNI ACTGG 4 cut(s) 93, 328, 595, 963
BseRI GAGGAG 1 cut(s) 1017
BseXI GCAGC 7 cut(s) 228, 278, 595, 623, 1180, 1202, 1208
BsgI GTGCAG 1 cut(s) 285
Bsh1285I CGRYCG 1 cut(s) 168
BshVI ATCGAT 1 cut(s) 164
BsiEI CGRYCG 1 cut(s) 168
BsiHKAI GWGCWC 2 cut(s) 29, 958
BsiSI CCGG 3 cut(s) 39, 120, 1028
BslFI GGGAC 2 cut(s) 726, 861
BslI CCNNNNNNNGG 2 cut(s) 188, 1001
BsmAI GTCTC 1 cut(s) 455
BsmFI GGGAC 2 cut(s) 726, 861
Bsp1286I GDGCHC 2 cut(s) 29, 958
Bsp13I TCCGGA 2 cut(s) 38, 1027
BspACI CCGC 5 cut(s) 11, 102, 252, 1124, 1169
BspCNI CTCAG 4 cut(s) 247, 364, 438, 1333
BspDI ATCGAT 1 cut(s) 164
BspEI TCCGGA 2 cut(s) 38, 1027
BspLI GGNNCC 2 cut(s) 714, 849
BspMAI CTGCAG 2 cut(s) 613, 1198
BspMI ACCTGC 1 cut(s) 292
BspOI GCTAGC 2 cut(s) 303, 1232
BspPI GGATC 4 cut(s) 65, 601, 758, 1174
BspQI GCTCTTC 1 cut(s) 1206
BsrBI CCGCTC 1 cut(s) 252
BsrDI GCAATG 1 cut(s) 501
BsrI ACTGG 4 cut(s) 93, 328, 595, 963
BssECI CCNNGG 1 cut(s) 1245
BssNAI GTATAC 1 cut(s) 895
Bst1107I GTATAC 1 cut(s) 895
Bst2UI CCWGG 1 cut(s) 511
Bst4CI ACNGT 3 cut(s) 577, 832, 1246
Bst6I CTCTTC 2 cut(s) 465, 1206
BstBAI YACGTR 1 cut(s) 1253
BstC8I GCNNGC 4 cut(s) 229, 301, 507, 1230
BstDEI CTNAG 7 cut(s) 234, 372, 446, 1133, 1315, 1320, 1329
BstDSI CCRYGG 1 cut(s) 1245
BstF5I GGATG 3 cut(s) 199, 778, 1132
BstH2I RGCGCY 1 cut(s) 422
BstHHI GCGC 1 cut(s) 421
BstMAI GTCTC 1 cut(s) 455
BstMCI CGRYCG 1 cut(s) 168
BstMWI GCNNNNNNNGC 6 cut(s) 108, 272, 416, 620, 629, 1196
BstNI CCWGG 1 cut(s) 511
BstNSI RCATGY 1 cut(s) 509
BstSCI CCNGG 1 cut(s) 509
BstSFI CTRYAG 2 cut(s) 609, 1194
BstV1I GCAGC 7 cut(s) 228, 278, 595, 623, 1180, 1202, 1208
BstX2I RGATCY 3 cut(s) 57, 593, 904
BstXI CCANNNNNNTGG 1 cut(s) 517
BstYI RGATCY 3 cut(s) 57, 593, 904
BstZ17I GTATAC 1 cut(s) 895
Bsu15I ATCGAT 1 cut(s) 164
BsuTUI ATCGAT 1 cut(s) 164
BtgI CCRYGG 1 cut(s) 1245
BtrI CACGTC 1 cut(s) 1139
BtsCI GGATG 3 cut(s) 199, 778, 1132
BtsI GCAGTG 1 cut(s) 929
BtsIMutI CAGTG 3 cut(s) 433, 929, 956
BveI ACCTGC 1 cut(s) 292
Cac8I GCNNGC 4 cut(s) 229, 301, 507, 1230
CfoI GCGC 1 cut(s) 421
Cfr13I GGNCC 4 cut(s) 713, 800, 848, 1109
ClaI ATCGAT 1 cut(s) 164
CseI GACGC 2 cut(s) 78, 1294
Csp6I GTAC 3 cut(s) 680, 1083, 1259
CviAII CATG 2 cut(s) 506, 972
CviQI GTAC 3 cut(s) 680, 1083, 1259
DdeI CTNAG 7 cut(s) 234, 372, 446, 1133, 1315, 1320, 1329
DriI GACNNNNNGTC 1 cut(s) 144
Eam1104I CTCTTC 2 cut(s) 465, 1206
Eam1105I GACNNNNNGTC 1 cut(s) 144
EarI CTCTTC 2 cut(s) 465, 1206
Ecl136II GAGCTC 1 cut(s) 27
Eco24I GRGCYC 1 cut(s) 29
Eco47I GGWCC 4 cut(s) 713, 800, 848, 1109
Eco53kI GAGCTC 1 cut(s) 27
Eco57I CTGAAG 2 cut(s) 291, 1254
Eco72I CACGTG 1 cut(s) 1253
EcoICRI GAGCTC 1 cut(s) 27
EcoO109I RGGNCCY 1 cut(s) 848
EcoRI GAATTC 1 cut(s) 1043
EcoRII CCWGG 1 cut(s) 509
EcoT38I GRGCYC 1 cut(s) 29
FaeI CATG 2 cut(s) 509, 975
FaqI GGGAC 2 cut(s) 726, 861
FatI CATG 2 cut(s) 505, 971
FbaI TGATCA 1 cut(s) 423
FblI GTMKAC 1 cut(s) 894
Fnu4HI GCNGC 7 cut(s) 217, 267, 609, 612, 1191, 1194, 1197
FokI GGATG 3 cut(s) 206, 765, 1139
FriOI GRGCYC 1 cut(s) 29
Fsp4HI GCNGC 7 cut(s) 217, 267, 609, 612, 1191, 1194, 1197
FspBI CTAG 9 cut(s) 300, 437, 489, 683, 692, 867, 980, 1010, 1229
GlaI GCGC 1 cut(s) 420
GluI GCNGC 7 cut(s) 217, 267, 609, 612, 1191, 1194, 1197
HaeII RGCGCY 1 cut(s) 422
HapII CCGG 3 cut(s) 39, 120, 1028
HgaI GACGC 2 cut(s) 78, 1294
HhaI GCGC 1 cut(s) 421
Hin1II CATG 2 cut(s) 509, 975
Hin6I GCGC 1 cut(s) 419
HinP1I GCGC 1 cut(s) 419
HindIII AAGCTT 2 cut(s) 47, 815
HinfI GANTC 9 cut(s) 42, 145, 156, 238, 380, 643, 991, 1172, 1292
HpaII CCGG 3 cut(s) 39, 120, 1028
HphI GGTGA 2 cut(s) 572, 759
Hpy166II GTNNAC 2 cut(s) 541, 895
Hpy188I TCNGA 7 cut(s) 138, 170, 237, 367, 447, 810, 1323
Hpy188III TCNNGA 8 cut(s) 39, 389, 704, 980, 1028, 1088, 1112, 1282
Hpy8I GTNNAC 2 cut(s) 541, 895
Hpy99I CGWCG 3 cut(s) 22, 25, 156
HpyAV CCTTC 4 cut(s) 315, 515, 737, 1229
HpyCH4III ACNGT 3 cut(s) 577, 832, 1246
HpyCH4IV ACGT 2 cut(s) 1138, 1252
HpyCH4V TGCA 6 cut(s) 266, 293, 611, 623, 934, 1196
HpyF10VI GCNNNNNNNGC 6 cut(s) 108, 272, 416, 620, 629, 1196
HpyF3I CTNAG 7 cut(s) 234, 372, 446, 1133, 1315, 1320, 1329
HpySE526I ACGT 2 cut(s) 1138, 1252
Hsp92II CATG 2 cut(s) 509, 975
HspAI GCGC 1 cut(s) 419
Kpn2I TCCGGA 2 cut(s) 38, 1027
Ksp22I TGATCA 1 cut(s) 423
LguI GCTCTTC 1 cut(s) 1206
LmnI GCTCC 4 cut(s) 32, 170, 566, 1160
Lsp1109I GCAGC 7 cut(s) 228, 278, 595, 623, 1180, 1202, 1208
LweI GCATC 3 cut(s) 76, 184, 523
MaeI CTAG 9 cut(s) 300, 437, 489, 683, 692, 867, 980, 1010, 1229
MaeII ACGT 2 cut(s) 1138, 1252
MaeIII GTNAC 3 cut(s) 765, 1021, 1240
MbiI CCGCTC 1 cut(s) 252
MfeI CAATTG 1 cut(s) 1164
MflI RGATCY 3 cut(s) 57, 593, 904
MhlI GDGCHC 2 cut(s) 29, 958
MluCI AATT 5 cut(s) 129, 183, 822, 1043, 1164
MlyI GAGTC 2 cut(s) 154, 1000
MmeI TCCRAC 2 cut(s) 161, 529
MroI TCCGGA 2 cut(s) 38, 1027
MseI TTAA 8 cut(s) 62, 315, 726, 819, 825, 837, 858, 915
MslI CAYNNNNRTG 1 cut(s) 972
MspA1I CMGCKG 2 cut(s) 269, 1193
MspI CCGG 3 cut(s) 39, 120, 1028
MspR9I CCNGG 1 cut(s) 511
MunI CAATTG 1 cut(s) 1164
MvaI CCWGG 1 cut(s) 511
MwoI GCNNNNNNNGC 6 cut(s) 108, 272, 416, 620, 629, 1196
NheI GCTAGC 2 cut(s) 299, 1228
NlaIII CATG 2 cut(s) 509, 975
NlaIV GGNNCC 2 cut(s) 714, 849
NmuCI GTSAC 1 cut(s) 765
NspI RCATGY 1 cut(s) 509
PaeI GCATGC 1 cut(s) 509
PaqCI CACCTGC 1 cut(s) 292
PciSI GCTCTTC 1 cut(s) 1206
PfeI GAWTC 7 cut(s) 42, 156, 238, 380, 643, 1172, 1292
PflMI CCANNNNNTGG 1 cut(s) 188
PkrI GCNGC 7 cut(s) 218, 268, 610, 613, 1192, 1195, 1198
Ple19I CGATCG 1 cut(s) 168
PleI GAGTC 2 cut(s) 153, 999
PmaCI CACGTG 1 cut(s) 1253
PmlI CACGTG 1 cut(s) 1253
PpsI GAGTC 2 cut(s) 153, 999
Ppu21I YACGTR 1 cut(s) 1253
PpuMI RGGWCCY 1 cut(s) 848
Psp124BI GAGCTC 1 cut(s) 29
Psp5II RGGWCCY 1 cut(s) 848
Psp6I CCWGG 1 cut(s) 509
PspCI CACGTG 1 cut(s) 1253
PspGI CCWGG 1 cut(s) 509
PspN4I GGNNCC 2 cut(s) 714, 849
PspPI GGNCC 4 cut(s) 713, 800, 848, 1109
PspPPI RGGWCCY 1 cut(s) 848
PstI CTGCAG 2 cut(s) 613, 1198
PsuI RGATCY 3 cut(s) 57, 593, 904
PvuI CGATCG 1 cut(s) 168
PvuII CAGCTG 2 cut(s) 269, 1193
RsaI GTAC 3 cut(s) 681, 1084, 1260
RsaNI GTAC 3 cut(s) 680, 1083, 1259
RseI CAYNNNNRTG 1 cut(s) 972
SacI GAGCTC 1 cut(s) 29
SapI GCTCTTC 1 cut(s) 1206
SaqAI TTAA 8 cut(s) 62, 315, 726, 819, 825, 837, 858, 915
SatI GCNGC 7 cut(s) 217, 267, 609, 612, 1191, 1194, 1197
Sau96I GGNCC 4 cut(s) 713, 800, 848, 1109
SchI GAGTC 2 cut(s) 154, 1000
ScrFI CCNGG 1 cut(s) 511
SduI GDGCHC 2 cut(s) 29, 958
SfaNI GCATC 3 cut(s) 76, 184, 523
SfcI CTRYAG 2 cut(s) 609, 1194
SinI GGWCC 4 cut(s) 713, 800, 848, 1109
SmiMI CAYNNNNRTG 1 cut(s) 972
SmlI CTYRAG 2 cut(s) 389, 1088
SmoI CTYRAG 2 cut(s) 389, 1088
SpeI ACTAGT 1 cut(s) 1009
SphI GCATGC 1 cut(s) 509
Sse9I AATT 5 cut(s) 129, 183, 822, 1043, 1164
SsiI CCGC 5 cut(s) 11, 102, 252, 1124, 1169
SspMI CTAG 9 cut(s) 300, 437, 489, 683, 692, 867, 980, 1010, 1229
SstI GAGCTC 1 cut(s) 29
StyD4I CCNGG 1 cut(s) 509
TaaI ACNGT 3 cut(s) 577, 832, 1246
TaiI ACGT 2 cut(s) 1141, 1255
TaqI TCGA 3 cut(s) 164, 1038, 1053
TasI AATT 5 cut(s) 129, 183, 822, 1043, 1164
TatI WGTACW 3 cut(s) 679, 1082, 1258
TfiI GAWTC 7 cut(s) 42, 156, 238, 380, 643, 1172, 1292
Tru1I TTAA 8 cut(s) 62, 315, 726, 819, 825, 837, 858, 915
Tru9I TTAA 8 cut(s) 62, 315, 726, 819, 825, 837, 858, 915
TscAI CASTG 3 cut(s) 433, 936, 963
TseFI GTSAC 1 cut(s) 765
TseI GCWGC 7 cut(s) 216, 266, 608, 611, 1190, 1193, 1196
Tsp45I GTSAC 1 cut(s) 765
TspDTI ATGAA 6 cut(s) 515, 803, 956, 960, 962, 1164
TspGWI ACGGA 1 cut(s) 984
TspRI CASTG 3 cut(s) 433, 936, 963
Van91I CCANNNNNTGG 1 cut(s) 188
VpaK11BI GGWCC 4 cut(s) 713, 800, 848, 1109
XapI RAATTY 2 cut(s) 129, 1043
XbaI TCTAGA 1 cut(s) 979
XceI RCATGY 1 cut(s) 509
XmiI GTMKAC 1 cut(s) 894
XspI CTAG 9 cut(s) 300, 437, 489, 683, 692, 867, 980, 1010, 1229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.