Rroxscaffold_7G00204770

Anthranilate phosphoribosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
54232041 .. 54236580
4540 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00204770.1

Sequence Viewer

Length: 1248 bp
ATGGCGGTGTCAACGCAACTTCACTCACTTACCACTCTTGCTTCATTGACTCACCGCACTAAGGTCAAGTTTAACGGCGCGCTGCGCAGCTCGTTTCCCAATGCAAAGCAAACAAGCCTATCCATGCTTTGCGGTGCTTGTGCGAGTGCACGATCCTTGTTTACGAGAGATCAAACCCACCATTTACTTCCTTCAATGAGTCCGAAGCCAAAGCTTCATTGGAGTTCTTCTTTGAGTGATGCTAATGAGGCTTTGATTAGCGCCTTTCTTGTGTTGTTGAGAGCCAAAGGAGAGACTTATGAAGAAATTGTGGGATTAGCAAAGGCAATGATAAAGCACAGTTTGAAGATTGAGGGCTTGGATGACGCAGTTGACATTGTTGGAACTGGTGGTGACGGAGCAAACACAGTAAACATTTCAACCGGGGCTTCAATACTTGCTGCAGCTTGTGGTGCAAAAGTTGCAAAGCAAGGTAATCGTTCAAGTTCCTCTGCATGTGGAAGTGCAGATGTATTGGAAGCTTTGGGAATAATAATTGACTTGGACCCCGAGGGGGTCGTGAGATGTGTTAATGAAGTAGGGTTTGGTTTTATGATGGCACCAAAGTATCATCCAGCAATGAATGTCGTTCGTCCTGTAAGGAAAAAGCTAAAAGTAAAGACTGTATTCAACATTTTGGGACCTATGTTGAATCCAGCTAGAGTTCCTTTTGCTGTTGTTGGTGTATACAAGGAAGAATTAGTCCTAAAGATGGCTAAAGCATTACAAAGCTTTGGCATGAAGAGAGCATTGGTTGTTCACTCGAAGGGCTTGGACGAAATGAGTCCCCTTGGACCTGGACATATCCTTAATGTGACTCCTAATAAGATTGAGAAGTTCTCCTTTGATCCATTGGACTTTGGAATTCCTCGATGGACTATAGATGATTTGCGAGGTGGAGATCCAGAGTATAACGCTGAGGCATTAAAGCGCGTATTATCAGGAGAGAAAGGTTCCATGGCAGATGCGTTTATCCTAAATGCAGCAGCAGCTCTTTTAGTCAGCGGCCGTGTAAACATTTTGGCTGAAGGAGTTTCTTTGGCTCGTGAGACACAACTTTCAGGAAAAGCTATCAAGACGCTTGATCAATGCGTATCTCTCTCGAATGTAAACAATGAGGAAAGATACAGTTATTTATTAAGGATGCTTCAGGAACTTTTGGATATCAAGTTTCAAGTTTTCAAGATGAAAGCCATGATTTTCACTTGA

Protein Analysis

415

Amino Acids

44.69

Weight (kDa)

9.23

Isoelectric Point (pI)

41.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glycos_trans_3N PF02885 80 - 113 2.8e-10 Glycosyl transferase family, helical bundle domain
Glycos_transf_3 PF00591 121 - 370 1.1e-96 Glycosyl transferase family, a/b domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 86
AccB1I GGYRCC 1 cut(s) 598
AccI GTMKAC 1 cut(s) 726
AccII CGCG 2 cut(s) 80, 972
AciI CCGC 4 cut(s) 5, 55, 132, 1044
AclWI GGATC 3 cut(s) 147, 881, 935
AcoI YGGCCR 1 cut(s) 1045
AcsI RAATTY 1 cut(s) 903
AcuI CTGAAG 2 cut(s) 1086, 1172
AfiI CCNNNNNNNGG 3 cut(s) 61, 553, 751
AgsI TTSAA 9 cut(s) 195, 346, 420, 432, 483, 670, 691, 1214, 1222
AjnI CCWGG 1 cut(s) 835
AjuI GAANNNNNNNTTGG 4 cut(s) 567, 599, 773, 805
AluBI AGCT 9 cut(s) 90, 214, 446, 521, 649, 698, 771, 1031, 1109
AluI AGCT 9 cut(s) 90, 214, 446, 521, 649, 698, 771, 1031, 1109
Alw21I GWGCWC 1 cut(s) 151
Alw26I GTCTC 2 cut(s) 287, 1082
Alw44I GTGCAC 1 cut(s) 147
AlwI GGATC 3 cut(s) 147, 881, 935
Ama87I CYCGRG 1 cut(s) 548
AoxI GGCC 1 cut(s) 1045
ApaLI GTGCAC 1 cut(s) 147
ApeKI GCWGC 7 cut(s) 82, 87, 440, 443, 1022, 1025, 1028
ApoI RAATTY 1 cut(s) 903
AspLEI GCGC 5 cut(s) 80, 82, 87, 263, 972
AspS9I GGNCC 3 cut(s) 544, 680, 833
AsuC2I CCSGG 1 cut(s) 424
AsuHPI GGTGA 2 cut(s) 44, 404
AvaI CYCGRG 1 cut(s) 548
AvaII GGWCC 3 cut(s) 544, 680, 833
BaeGI GKGCMC 1 cut(s) 151
BaeI ACNNNNGTAYC 2 cut(s) 590, 623
BanI GGYRCC 1 cut(s) 598
BauI CACGAG 1 cut(s) 1083
Bbv12I GWGCWC 1 cut(s) 151
BbvCI CCTCAGC 1 cut(s) 957
BbvI GCAGC 7 cut(s) 69, 99, 427, 455, 1034, 1037, 1040
BccI CCATC 3 cut(s) 589, 745, 906
BceAI ACGGC 2 cut(s) 91, 1032
BcgI CGANNNNNNTGC 2 cut(s) 458, 492
BciT130I CCWGG 1 cut(s) 837
BclI TGATCA 1 cut(s) 1123
BcnI CCSGG 1 cut(s) 424
BcoDI GTCTC 2 cut(s) 287, 1082
BfaI CTAG 1 cut(s) 699
BfmI CTRYAG 2 cut(s) 441, 918
BfoI RGCGCY 1 cut(s) 264
BisI GCNGC 8 cut(s) 83, 88, 441, 444, 1023, 1026, 1029, 1045
BlsI GCNGC 8 cut(s) 84, 89, 442, 445, 1024, 1027, 1030, 1046
Bme1390I CCNGG 2 cut(s) 424, 837
Bme18I GGWCC 3 cut(s) 544, 680, 833
BmeT110I CYCGRG 1 cut(s) 548
BmgT120I GGNCC 3 cut(s) 544, 680, 833
BmiI GGNNCC 4 cut(s) 546, 600, 681, 994
BmrFI CCNGG 2 cut(s) 424, 837
BmsI GCATC 3 cut(s) 229, 994, 1173
BplI GAGNNNNNCTC 2 cut(s) 863, 895
Bpu10I CCTNAGC 1 cut(s) 957
BpuMI CCSGG 1 cut(s) 424
BsaJI CCNNGG 4 cut(s) 423, 549, 829, 996
Bsc4I CCNNNNNNNGG 3 cut(s) 61, 553, 751
Bse1I ACTGG 1 cut(s) 391
Bse3DI GCAATG 2 cut(s) 333, 624
BseBI CCWGG 1 cut(s) 837
BseDI CCNNGG 4 cut(s) 423, 549, 829, 996
BseGI GGATG 3 cut(s) 367, 610, 1188
BseLI CCNNNNNNNGG 3 cut(s) 61, 553, 751
BseMI GCAATG 2 cut(s) 333, 624
BseMII CTCAG 1 cut(s) 948
BseNI ACTGG 1 cut(s) 391
BsePI GCGCGC 1 cut(s) 78
BseSI GKGCMC 1 cut(s) 151
BseX3I CGGCCG 1 cut(s) 1045
BseXI GCAGC 7 cut(s) 69, 99, 427, 455, 1034, 1037, 1040
BsgI GTGCAG 1 cut(s) 525
Bsh1236I CGCG 2 cut(s) 80, 972
Bsh1285I CGRYCG 1 cut(s) 1048
BshFI GGCC 1 cut(s) 1047
BshNI GGYRCC 1 cut(s) 598
BsiEI CGRYCG 1 cut(s) 1048
BsiHKAI GWGCWC 1 cut(s) 151
BsiHKCI CYCGRG 1 cut(s) 548
BsiSI CCGG 1 cut(s) 423
BslFI GGGAC 2 cut(s) 693, 810
BslI CCNNNNNNNGG 3 cut(s) 61, 553, 751
BsmAI GTCTC 2 cut(s) 287, 1082
BsmFI GGGAC 2 cut(s) 693, 810
BsnI GGCC 1 cut(s) 1047
BsoBI CYCGRG 1 cut(s) 548
Bsp1286I GDGCHC 1 cut(s) 151
Bsp143I GATC 5 cut(s) 152, 169, 886, 940, 1123
Bsp19I CCATGG 1 cut(s) 996
BspACI CCGC 4 cut(s) 5, 55, 132, 1044
BspANI GGCC 1 cut(s) 1047
BspCNI CTCAG 1 cut(s) 949
BspFNI CGCG 2 cut(s) 80, 972
BspLI GGNNCC 4 cut(s) 546, 600, 681, 994
BspMAI CTGCAG 1 cut(s) 445
BspPI GGATC 3 cut(s) 147, 881, 935
BspT107I GGYRCC 1 cut(s) 598
BsrDI GCAATG 2 cut(s) 333, 624
BsrI ACTGG 1 cut(s) 391
BssECI CCNNGG 4 cut(s) 423, 549, 829, 996
BssHII GCGCGC 1 cut(s) 78
BssMI GATC 5 cut(s) 152, 169, 886, 940, 1123
BssNAI GTATAC 1 cut(s) 727
BssSI CACGAG 1 cut(s) 1083
BssT1I CCWWGG 2 cut(s) 829, 996
Bst1107I GTATAC 1 cut(s) 727
Bst2BI CACGAG 1 cut(s) 1083
Bst2UI CCWGG 1 cut(s) 837
Bst4CI ACNGT 4 cut(s) 341, 409, 664, 1169
Bst6I CTCTTC 1 cut(s) 776
BstAPI GCANNNNNTGC 1 cut(s) 461
BstC8I GCNNGC 1 cut(s) 80
BstDEI CTNAG 2 cut(s) 60, 957
BstDSI CCRYGG 1 cut(s) 996
BstF5I GGATG 3 cut(s) 367, 610, 1188
BstFNI CGCG 2 cut(s) 80, 972
BstH2I RGCGCY 1 cut(s) 264
BstHHI GCGC 5 cut(s) 80, 82, 87, 263, 972
BstKTI GATC 5 cut(s) 155, 172, 889, 943, 1126
BstMAI GTCTC 2 cut(s) 287, 1082
BstMBI GATC 5 cut(s) 152, 169, 886, 940, 1123
BstMCI CGRYCG 1 cut(s) 1048
BstMWI GCNNNNNNNGC 5 cut(s) 84, 248, 452, 461, 1028
BstNI CCWGG 1 cut(s) 837
BstNSI RCATGY 1 cut(s) 498
BstSCI CCNGG 2 cut(s) 422, 835
BstSFI CTRYAG 2 cut(s) 441, 918
BstSLI GKGCMC 1 cut(s) 151
BstUI CGCG 2 cut(s) 80, 972
BstV1I GCAGC 7 cut(s) 69, 99, 427, 455, 1034, 1037, 1040
BstX2I RGATCY 1 cut(s) 940
BstYI RGATCY 1 cut(s) 940
BstZ17I GTATAC 1 cut(s) 727
BstZI CGGCCG 1 cut(s) 1045
BsuRI GGCC 1 cut(s) 1047
BtgI CCRYGG 1 cut(s) 996
BtsCI GGATG 3 cut(s) 367, 610, 1188
Cac8I GCNNGC 1 cut(s) 80
CfoI GCGC 5 cut(s) 80, 82, 87, 263, 972
Cfr13I GGNCC 3 cut(s) 544, 680, 833
CseI GACGC 2 cut(s) 374, 1126
CviAII CATG 5 cut(s) 124, 495, 778, 997, 1234
DdeI CTNAG 2 cut(s) 60, 957
DpnI GATC 5 cut(s) 154, 171, 888, 942, 1125
DpnII GATC 5 cut(s) 152, 169, 886, 940, 1123
EaeI YGGCCR 1 cut(s) 1045
EagI CGGCCG 1 cut(s) 1045
Eam1104I CTCTTC 1 cut(s) 776
EarI CTCTTC 1 cut(s) 776
EclXI CGGCCG 1 cut(s) 1045
Eco130I CCWWGG 2 cut(s) 829, 996
Eco32I GATATC 1 cut(s) 1204
Eco47I GGWCC 3 cut(s) 544, 680, 833
Eco52I CGGCCG 1 cut(s) 1045
Eco57I CTGAAG 2 cut(s) 1086, 1172
Eco88I CYCGRG 1 cut(s) 548
EcoO109I RGGNCCY 1 cut(s) 680
EcoRI GAATTC 1 cut(s) 903
EcoRII CCWGG 1 cut(s) 835
EcoRV GATATC 1 cut(s) 1204
EcoT14I CCWWGG 2 cut(s) 829, 996
ErhI CCWWGG 2 cut(s) 829, 996
FaeI CATG 5 cut(s) 127, 498, 781, 1000, 1237
FalI AAGNNNNNCTT 2 cut(s) 866, 898
FaqI GGGAC 2 cut(s) 693, 810
FatI CATG 5 cut(s) 123, 494, 777, 996, 1233
FbaI TGATCA 1 cut(s) 1123
FblI GTMKAC 1 cut(s) 726
Fnu4HI GCNGC 8 cut(s) 83, 88, 441, 444, 1023, 1026, 1029, 1045
FokI GGATG 3 cut(s) 374, 597, 1195
Fsp4HI GCNGC 8 cut(s) 83, 88, 441, 444, 1023, 1026, 1029, 1045
FspBI CTAG 1 cut(s) 699
FspI TGCGCA 1 cut(s) 86
GlaI GCGC 5 cut(s) 79, 81, 86, 262, 971
GluI GCNGC 8 cut(s) 83, 88, 441, 444, 1023, 1026, 1029, 1045
HaeII RGCGCY 1 cut(s) 264
HaeIII GGCC 1 cut(s) 1047
HapII CCGG 1 cut(s) 423
HgaI GACGC 2 cut(s) 374, 1126
HhaI GCGC 5 cut(s) 80, 82, 87, 263, 972
Hin1II CATG 5 cut(s) 127, 498, 781, 1000, 1237
Hin6I GCGC 5 cut(s) 78, 80, 85, 261, 970
HinP1I GCGC 5 cut(s) 78, 80, 85, 261, 970
HincII GTYRAC 2 cut(s) 12, 373
HindII GTYRAC 2 cut(s) 12, 373
HindIII AAGCTT 3 cut(s) 212, 519, 769
HinfI GANTC 5 cut(s) 49, 199, 691, 823, 856
HpaII CCGG 1 cut(s) 423
HphI GGTGA 2 cut(s) 44, 404
Hpy166II GTNNAC 9 cut(s) 12, 149, 162, 373, 412, 727, 799, 1054, 1150
Hpy188I TCNGA 1 cut(s) 204
Hpy188III TCNNGA 9 cut(s) 559, 944, 981, 1085, 1101, 1114, 1141, 1190, 1222
Hpy8I GTNNAC 9 cut(s) 12, 149, 162, 373, 412, 727, 799, 1054, 1150
HpyAV CCTTC 3 cut(s) 201, 799, 1061
HpyCH4III ACNGT 4 cut(s) 341, 409, 664, 1169
HpyCH4V TGCA 8 cut(s) 104, 149, 443, 455, 464, 494, 506, 1022
HpyF10VI GCNNNNNNNGC 5 cut(s) 84, 248, 452, 461, 1028
HpyF3I CTNAG 2 cut(s) 60, 957
Hsp92II CATG 5 cut(s) 127, 498, 781, 1000, 1237
HspAI GCGC 5 cut(s) 78, 80, 85, 261, 970
Ksp22I TGATCA 1 cut(s) 1123
Kzo9I GATC 5 cut(s) 152, 169, 886, 940, 1123
LmnI GCTCC 1 cut(s) 398
Lsp1109I GCAGC 7 cut(s) 69, 99, 427, 455, 1034, 1037, 1040
LweI GCATC 3 cut(s) 229, 994, 1173
MaeI CTAG 1 cut(s) 699
MaeIII GTNAC 2 cut(s) 392, 853
MalI GATC 5 cut(s) 154, 171, 888, 942, 1125
MboI GATC 5 cut(s) 152, 169, 886, 940, 1123
MboII GAAGA 5 cut(s) 219, 314, 358, 746, 793
MflI RGATCY 1 cut(s) 940
MhlI GDGCHC 1 cut(s) 151
MluCI AATT 4 cut(s) 306, 534, 737, 903
MlyI GAGTC 4 cut(s) 43, 208, 832, 850
MmeI TCCRAC 1 cut(s) 361
MnlI CCTC 8 cut(s) 241, 346, 499, 544, 918, 926, 952, 1150
MseI TTAA 5 cut(s) 72, 570, 849, 965, 1178
MspA1I CMGCKG 1 cut(s) 1044
MspI CCGG 1 cut(s) 423
MspR9I CCNGG 2 cut(s) 424, 837
MteI GCGCNGCGC 1 cut(s) 83
MvaI CCWGG 1 cut(s) 837
MvnI CGCG 2 cut(s) 80, 972
MwoI GCNNNNNNNGC 5 cut(s) 84, 248, 452, 461, 1028
NciI CCSGG 1 cut(s) 424
NcoI CCATGG 1 cut(s) 996
NdeII GATC 5 cut(s) 152, 169, 886, 940, 1123
NlaIII CATG 5 cut(s) 127, 498, 781, 1000, 1237
NlaIV GGNNCC 4 cut(s) 546, 600, 681, 994
NmuCI GTSAC 2 cut(s) 392, 853
NsbI TGCGCA 1 cut(s) 86
NspI RCATGY 1 cut(s) 498
PauI GCGCGC 1 cut(s) 78
PfeI GAWTC 1 cut(s) 691
PkrI GCNGC 8 cut(s) 84, 89, 442, 445, 1024, 1027, 1030, 1046
PleI GAGTC 4 cut(s) 43, 207, 831, 850
PpsI GAGTC 4 cut(s) 43, 207, 831, 850
PpuMI RGGWCCY 1 cut(s) 680
Psp5II RGGWCCY 1 cut(s) 680
Psp6I CCWGG 1 cut(s) 835
PspGI CCWGG 1 cut(s) 835
PspN4I GGNNCC 4 cut(s) 546, 600, 681, 994
PspPI GGNCC 3 cut(s) 544, 680, 833
PspPPI RGGWCCY 1 cut(s) 680
PstI CTGCAG 1 cut(s) 445
PsuI RGATCY 1 cut(s) 940
PteI GCGCGC 1 cut(s) 78
SaqAI TTAA 5 cut(s) 72, 570, 849, 965, 1178
SatI GCNGC 8 cut(s) 83, 88, 441, 444, 1023, 1026, 1029, 1045
Sau3AI GATC 5 cut(s) 152, 169, 886, 940, 1123
Sau96I GGNCC 3 cut(s) 544, 680, 833
SchI GAGTC 4 cut(s) 43, 208, 832, 850
ScrFI CCNGG 2 cut(s) 424, 837
SduI GDGCHC 1 cut(s) 151
SfaNI GCATC 3 cut(s) 229, 994, 1173
SfcI CTRYAG 2 cut(s) 441, 918
SinI GGWCC 3 cut(s) 544, 680, 833
Sse9I AATT 4 cut(s) 306, 534, 737, 903
SsiI CCGC 4 cut(s) 5, 55, 132, 1044
SspMI CTAG 1 cut(s) 699
StyD4I CCNGG 2 cut(s) 422, 835
StyI CCWWGG 2 cut(s) 829, 996
TaaI ACNGT 4 cut(s) 341, 409, 664, 1169
TaqI TCGA 3 cut(s) 803, 910, 1142
TasI AATT 4 cut(s) 306, 534, 737, 903
TauI GCSGC 1 cut(s) 1047
TfiI GAWTC 1 cut(s) 691
Tru1I TTAA 5 cut(s) 72, 570, 849, 965, 1178
Tru9I TTAA 5 cut(s) 72, 570, 849, 965, 1178
TseFI GTSAC 2 cut(s) 392, 853
TseI GCWGC 7 cut(s) 82, 87, 440, 443, 1022, 1025, 1028
Tsp45I GTSAC 2 cut(s) 392, 853
TspDTI ATGAA 7 cut(s) 33, 206, 315, 588, 635, 794, 1241
TspGWI ACGGA 1 cut(s) 411
VneI GTGCAC 1 cut(s) 147
VpaK11BI GGWCC 3 cut(s) 544, 680, 833
XapI RAATTY 1 cut(s) 903
XceI RCATGY 1 cut(s) 498
XcmI CCANNNNNNNNNTGG 1 cut(s) 216
XmiI GTMKAC 1 cut(s) 726
XspI CTAG 1 cut(s) 699
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.