Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0002911

Physical Location & Seq

Genomic Coordinates Forward (+)

11283601 .. 11287749

Gene Structure 4149 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG138800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1221 bp

ATGGCAGTGTCAACGCCGCAGCTTCACTCACTTACCAGTCTTGCTTCATTGACTCACCGCACTAAGGTCAAGTTTAACAGCGCCTGCTGCACAGCTCTGTTTCCCAATGCAAAGCAAACAAGCCCATCCACGCTTTGCAGTGCTGTGCAGAGTGCACAGTCCACTGTTTCTGAGAGATCAAACCCACCATTTACTTCCTTCAATGAGTTGATTGAGTCCTTGATTGATAAGGTGGATTTGTCGGAGTCCGAAGCCCAAGCTTCATTGGAGTTCTTGCTGAGTGATGCTAATGAGGCTTTGATTAGCGCCTTTCTTGTGTTGTTGAGAGCCAAAGGAGAGACTTATGAAGAAATTGTGGGATTAGCAAAGGCAATGATAAAGCACAGTTTGAAGATTGAGGGCTTGGATGACGCAGTTGACATTGTTGGAACTGGTGGTGACGGAGCAAACACAGTAAACATTTCAACCGGGGCTTCAATACTTGTTGCAGCCTGTGGTGCAAAAGTTGCAAAGCAAGGTAATCGTTCAAGTTCCTCTGCATGTGGAAGTGCAGATGTATTGGAAGCTTTGGGAATAATAATTGACTTGGACCCTGAGGGGGTCGCGAGATGTGTTAATGAAGTAGGCATTGGTTTTATGATGGCACCAAAGTATCATCCAGCAATGAATGTCGTTCGTCCAGTAAGGAAAAAGCTAAAAGTAAAGACTGTATTCAACATTTTGGGACCTATGTTGAATCCAGCTAGAGTTCCTTTTGCTGTTGTTGGTGTATACAAGGAAGAATTAGTCTTAAAGATGGCTAAAGCATTACAAAGCTTTGGCATGAAGAGAGCATTGGTTGTTCACTCGGAGGGCTTGGACGAAATGAGTCCCCTTGGACCTGGACATATCCTTAATGTGACTCCTGATAAGATTGAGAAGTTCTCCTTTGATCCATTGGATTTTGGAATTCCTCGATGCACTGTAGATGATTTGCGAGGTGGAGATCCAGAGTATAACGCTGAGGCATTAAGGCGTGTATTATCAGGAGAGAAAGGTTCCATTGCAGATGCGTTTATCCTAAATGCAGCAGCAGCTCTTTTAGTCAGCGGCCGTGTAAACACTTTGGCTGAAGGAGTTTCTTTGGCTCGTGAGACACAACTTTCAGGAAAAGCTATCAAGACGCTTGATCAATGGGTATCTCTCTCGAATACAATGAGGAAAGATACAGTTATTTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000162 GO:0003674 GO:0003824 GO:0004048 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0009987 GO:0016053 GO:0016740 GO:0016757 GO:0016763 GO:0018130 GO:0019438 GO:0019752 GO:0031967 GO:0031975 GO:0034641 GO:0042401 GO:0042430 GO:0042435 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046219 GO:0046394 GO:0046483 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

Glycos_trans_3N Glycos_transf_3

Protein Analysis

406

Amino Acids

43.13

Weight (kDa)

6.13

Isoelectric Point (pI)

40.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glycos_trans_3N	PF02885	69 - 128	1.4e-15	Glycosyl transferase family, helical bundle domain
Glycos_transf_3	PF00591	136 - 385	6.4e-99	Glycosyl transferase family, a/b domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002911)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17990
fragaria_vesca	FvH4_5g05490
malus_domestica	MD06G1172000.v1.1 MD14G1177900.v1.1
prunus_persica	Prupe.5G171400_v2.0.a1
pyrus_communis	pycom06g15320 pycom14g14840
rosa_chinensis	RchiOBHm_Chr6g0263061 RchiOBHm_Chr6g0263071 RchiOBHm_Chr6g0263081 RchiOBHm_Chr7g0193331
rosa_laevigata	RLG00000004279 RLG00000014377 RLG00000014379 RLG00000014380 RLG00000014381 RLG00000014382 RLG00000020372
rosa_multiflora	Rmu_sc0013034.1_g000001 Rmu_ssc0000092.1_g000010
rosa_roxburghii	Rroxscaffold_3G00262210 Rroxscaffold_7G00204720 Rroxscaffold_7G00204730 Rroxscaffold_7G00204770
rosa_rugosa	Rorug06G0003300 Rorug06G0003400 Rorug07G0008900
rosa_samantha	Rh6BG115300 Rh6BG116400 Rh6BG116500 Rh6CG114000 Rh6CG114800 Rh7AG134700 Rh7CG138800 Rh7DG136800
rosa_wichuraiana	Rw6G010480 Rw6G010510 Rw7G011510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	643
AccI	GTMKAC	1 cut(s)	771
AccII	CGCG	1 cut(s)	605
AciI	CCGC	3 cut(s)	17, 58, 1089
AclWI	GGATC	2 cut(s)	926, 980
AcoI	YGGCCR	1 cut(s)	1090
AcsI	RAATTY	1 cut(s)	948
AcuI	CTGAAG	1 cut(s)	1131
AfiI	CCNNNNNNNGG	2 cut(s)	64, 598
AgsI	TTSAA	7 cut(s)	202, 391, 465, 477, 528, 715, 736
AjnI	CCWGG	1 cut(s)	880
AjuI	GAANNNNNNNTTGG	4 cut(s)	612, 644, 818, 850
AluBI	AGCT	9 cut(s)	22, 95, 260, 566, 694, 743, 816, 1076, 1154
AluI	AGCT	9 cut(s)	22, 95, 260, 566, 694, 743, 816, 1076, 1154
Alw21I	GWGCWC	1 cut(s)	157
Alw26I	GTCTC	2 cut(s)	332, 1127
Alw44I	GTGCAC	1 cut(s)	153
AlwI	GGATC	2 cut(s)	926, 980
AlwNI	CAGNNNCTG	1 cut(s)	84
AoxI	GGCC	1 cut(s)	1090
ApaLI	GTGCAC	1 cut(s)	153
ApeKI	GCWGC	6 cut(s)	19, 87, 488, 1067, 1070, 1073
ApoI	RAATTY	1 cut(s)	948
AspLEI	GCGC	2 cut(s)	83, 308
AspS9I	GGNCC	3 cut(s)	589, 725, 878
AsuC2I	CCSGG	1 cut(s)	469
AsuHPI	GGTGA	2 cut(s)	47, 449
AvaII	GGWCC	3 cut(s)	589, 725, 878
AxyI	CCTNAGG	1 cut(s)	594
BaeGI	GKGCMC	1 cut(s)	157
BaeI	ACNNNNGTAYC	2 cut(s)	635, 668
BanI	GGYRCC	1 cut(s)	643
BauI	CACGAG	1 cut(s)	1128
Bbv12I	GWGCWC	1 cut(s)	157
BbvCI	CCTCAGC	1 cut(s)	1002
BbvI	GCAGC	6 cut(s)	31, 74, 500, 1079, 1082, 1085
BccI	CCATC	3 cut(s)	133, 634, 790
BceAI	ACGGC	1 cut(s)	1077
BcgI	CGANNNNNNTGC	2 cut(s)	503, 537
BciT130I	CCWGG	1 cut(s)	882
BclI	TGATCA	1 cut(s)	1168
BcnI	CCSGG	1 cut(s)	469
BcoDI	GTCTC	2 cut(s)	332, 1127
BfaI	CTAG	1 cut(s)	744
BfmI	CTRYAG	1 cut(s)	963
BfoI	RGCGCY	2 cut(s)	84, 309
BisI	GCNGC	8 cut(s)	17, 20, 88, 489, 1068, 1071, 1074, 1090
BlsI	GCNGC	8 cut(s)	18, 21, 89, 490, 1069, 1072, 1075, 1091
Bme1390I	CCNGG	2 cut(s)	469, 882
Bme18I	GGWCC	3 cut(s)	589, 725, 878
BmgT120I	GGNCC	3 cut(s)	589, 725, 878
BmiI	GGNNCC	4 cut(s)	591, 645, 726, 1039
BmrFI	CCNGG	2 cut(s)	469, 882
BmsI	GCATC	3 cut(s)	274, 947, 1039
BplI	GAGNNNNNCTC	2 cut(s)	908, 940
Bpu10I	CCTNAGC	1 cut(s)	1002
BpuMI	CCSGG	1 cut(s)	469
BsaJI	CCNNGG	2 cut(s)	468, 874
Bsc4I	CCNNNNNNNGG	2 cut(s)	64, 598
Bse1I	ACTGG	3 cut(s)	36, 436, 680
Bse21I	CCTNAGG	1 cut(s)	594
Bse3DI	GCAATG	3 cut(s)	378, 669, 1041
BseBI	CCWGG	1 cut(s)	882
BseDI	CCNNGG	2 cut(s)	468, 874
BseGI	GGATG	3 cut(s)	125, 412, 655
BseLI	CCNNNNNNNGG	2 cut(s)	64, 598
BseMI	GCAATG	3 cut(s)	378, 669, 1041
BseMII	CTCAG	4 cut(s)	162, 269, 585, 993
BseNI	ACTGG	3 cut(s)	36, 436, 680
BseSI	GKGCMC	1 cut(s)	157
BseX3I	CGGCCG	1 cut(s)	1090
BseXI	GCAGC	6 cut(s)	31, 74, 500, 1079, 1082, 1085
BsgI	GTGCAG	3 cut(s)	73, 167, 570
Bsh1236I	CGCG	1 cut(s)	605
Bsh1285I	CGRYCG	1 cut(s)	1093
BshFI	GGCC	1 cut(s)	1092
BshNI	GGYRCC	1 cut(s)	643
BsiEI	CGRYCG	1 cut(s)	1093
BsiHKAI	GWGCWC	1 cut(s)	157
BsiSI	CCGG	1 cut(s)	468
BslFI	GGGAC	2 cut(s)	738, 855
BslI	CCNNNNNNNGG	2 cut(s)	64, 598
BsmAI	GTCTC	2 cut(s)	332, 1127
BsmFI	GGGAC	2 cut(s)	738, 855
BsnI	GGCC	1 cut(s)	1092
Bsp1286I	GDGCHC	1 cut(s)	157
Bsp143I	GATC	4 cut(s)	176, 931, 985, 1168
Bsp68I	TCGCGA	1 cut(s)	605
BspACI	CCGC	3 cut(s)	17, 58, 1089
BspANI	GGCC	1 cut(s)	1092
BspCNI	CTCAG	4 cut(s)	163, 270, 586, 994
BspFNI	CGCG	1 cut(s)	605
BspLI	GGNNCC	4 cut(s)	591, 645, 726, 1039
BspPI	GGATC	2 cut(s)	926, 980
BspT107I	GGYRCC	1 cut(s)	643
BsrDI	GCAATG	3 cut(s)	378, 669, 1041
BsrI	ACTGG	3 cut(s)	36, 436, 680
BssECI	CCNNGG	2 cut(s)	468, 874
BssMI	GATC	4 cut(s)	176, 931, 985, 1168
BssNAI	GTATAC	1 cut(s)	772
BssSI	CACGAG	1 cut(s)	1128
BssT1I	CCWWGG	1 cut(s)	874
Bst1107I	GTATAC	1 cut(s)	772
Bst2BI	CACGAG	1 cut(s)	1128
Bst2UI	CCWGG	1 cut(s)	882
Bst4CI	ACNGT	7 cut(s)	159, 166, 386, 454, 709, 964, 1210
Bst6I	CTCTTC	1 cut(s)	821
BstAPI	GCANNNNNTGC	1 cut(s)	506
BstC8I	GCNNGC	1 cut(s)	85
BstDEI	CTNAG	5 cut(s)	63, 171, 278, 594, 1002
BstF5I	GGATG	3 cut(s)	125, 412, 655
BstFNI	CGCG	1 cut(s)	605
BstH2I	RGCGCY	2 cut(s)	84, 309
BstHHI	GCGC	2 cut(s)	83, 308
BstKTI	GATC	4 cut(s)	179, 934, 988, 1171
BstMAI	GTCTC	2 cut(s)	332, 1127
BstMBI	GATC	4 cut(s)	176, 931, 985, 1168
BstMCI	CGRYCG	1 cut(s)	1093
BstMWI	GCNNNNNNNGC	5 cut(s)	87, 293, 497, 506, 1073
BstNI	CCWGG	1 cut(s)	882
BstNSI	RCATGY	1 cut(s)	543
BstSCI	CCNGG	2 cut(s)	467, 880
BstSFI	CTRYAG	1 cut(s)	963
BstSLI	GKGCMC	1 cut(s)	157
BstUI	CGCG	1 cut(s)	605
BstV1I	GCAGC	6 cut(s)	31, 74, 500, 1079, 1082, 1085
BstX2I	RGATCY	1 cut(s)	985
BstYI	RGATCY	1 cut(s)	985
BstZ17I	GTATAC	1 cut(s)	772
BstZI	CGGCCG	1 cut(s)	1090
Bsu36I	CCTNAGG	1 cut(s)	594
BsuRI	GGCC	1 cut(s)	1092
BtsCI	GGATG	3 cut(s)	125, 412, 655
BtsI	GCAGTG	2 cut(s)	12, 145
BtsIMutI	CAGTG	4 cut(s)	12, 145, 162, 960
BtuMI	TCGCGA	1 cut(s)	605
Cac8I	GCNNGC	1 cut(s)	85
CaiI	CAGNNNCTG	1 cut(s)	84
CfoI	GCGC	2 cut(s)	83, 308
Cfr13I	GGNCC	3 cut(s)	589, 725, 878
CseI	GACGC	2 cut(s)	419, 1171
CviAII	CATG	2 cut(s)	540, 823
DdeI	CTNAG	5 cut(s)	63, 171, 278, 594, 1002
DpnI	GATC	4 cut(s)	178, 933, 987, 1170
DpnII	GATC	4 cut(s)	176, 931, 985, 1168
EaeI	YGGCCR	1 cut(s)	1090
EagI	CGGCCG	1 cut(s)	1090
Eam1104I	CTCTTC	1 cut(s)	821
EarI	CTCTTC	1 cut(s)	821
EclXI	CGGCCG	1 cut(s)	1090
Eco130I	CCWWGG	1 cut(s)	874
Eco47I	GGWCC	3 cut(s)	589, 725, 878
Eco52I	CGGCCG	1 cut(s)	1090
Eco57I	CTGAAG	1 cut(s)	1131
Eco81I	CCTNAGG	1 cut(s)	594
EcoO109I	RGGNCCY	1 cut(s)	725
EcoRI	GAATTC	1 cut(s)	948
EcoRII	CCWGG	1 cut(s)	880
EcoT14I	CCWWGG	1 cut(s)	874
ErhI	CCWWGG	1 cut(s)	874
FaeI	CATG	2 cut(s)	543, 826
FaiI	YATR	8 cut(s)	345, 541, 638, 731, 772, 824, 888, 996
FalI	AAGNNNNNCTT	2 cut(s)	911, 943
FaqI	GGGAC	2 cut(s)	738, 855
FatI	CATG	2 cut(s)	539, 822
FbaI	TGATCA	1 cut(s)	1168
FblI	GTMKAC	1 cut(s)	771
Fnu4HI	GCNGC	8 cut(s)	17, 20, 88, 489, 1068, 1071, 1074, 1090
FokI	GGATG	3 cut(s)	112, 419, 642
Fsp4HI	GCNGC	8 cut(s)	17, 20, 88, 489, 1068, 1071, 1074, 1090
FspBI	CTAG	1 cut(s)	744
GlaI	GCGC	2 cut(s)	82, 307
GluI	GCNGC	8 cut(s)	17, 20, 88, 489, 1068, 1071, 1074, 1090
HaeII	RGCGCY	2 cut(s)	84, 309
HaeIII	GGCC	1 cut(s)	1092
HapII	CCGG	1 cut(s)	468
HgaI	GACGC	2 cut(s)	419, 1171
HhaI	GCGC	2 cut(s)	83, 308
Hin1II	CATG	2 cut(s)	543, 826
Hin6I	GCGC	2 cut(s)	81, 306
HinP1I	GCGC	2 cut(s)	81, 306
HincII	GTYRAC	2 cut(s)	12, 418
HindII	GTYRAC	2 cut(s)	12, 418
HindIII	AAGCTT	3 cut(s)	258, 564, 814
HinfI	GANTC	6 cut(s)	52, 215, 245, 736, 868, 901
HpaII	CCGG	1 cut(s)	468
HphI	GGTGA	2 cut(s)	47, 449
Hpy166II	GTNNAC	8 cut(s)	12, 155, 162, 418, 457, 772, 844, 1099
Hpy188I	TCNGA	4 cut(s)	172, 244, 250, 850
Hpy188III	TCNNGA	8 cut(s)	604, 905, 989, 1026, 1130, 1146, 1159, 1186
Hpy8I	GTNNAC	8 cut(s)	12, 155, 162, 418, 457, 772, 844, 1099
HpyAV	CCTTC	2 cut(s)	208, 1106
HpyCH4III	ACNGT	7 cut(s)	159, 166, 386, 454, 709, 964, 1210
HpyF10VI	GCNNNNNNNGC	5 cut(s)	87, 293, 497, 506, 1073
HpyF3I	CTNAG	5 cut(s)	63, 171, 278, 594, 1002
Hsp92II	CATG	2 cut(s)	543, 826
HspAI	GCGC	2 cut(s)	81, 306
Ksp22I	TGATCA	1 cut(s)	1168
Kzo9I	GATC	4 cut(s)	176, 931, 985, 1168
LmnI	GCTCC	1 cut(s)	443
Lsp1109I	GCAGC	6 cut(s)	31, 74, 500, 1079, 1082, 1085
LweI	GCATC	3 cut(s)	274, 947, 1039
MaeI	CTAG	1 cut(s)	744
MaeIII	GTNAC	2 cut(s)	437, 898
MalI	GATC	4 cut(s)	178, 933, 987, 1170
MboI	GATC	4 cut(s)	176, 931, 985, 1168
MboII	GAAGA	4 cut(s)	359, 403, 791, 838
MflI	RGATCY	1 cut(s)	985
MhlI	GDGCHC	1 cut(s)	157
MluCI	AATT	4 cut(s)	351, 579, 782, 948
MlyI	GAGTC	5 cut(s)	46, 224, 254, 877, 895
MmeI	TCCRAC	2 cut(s)	222, 406
MnlI	CCTC	9 cut(s)	286, 391, 544, 589, 844, 963, 971, 997, 1191
MseI	TTAA	6 cut(s)	75, 615, 791, 894, 1010, 1219
MspA1I	CMGCKG	1 cut(s)	1089
MspI	CCGG	1 cut(s)	468
MspR9I	CCNGG	2 cut(s)	469, 882
MvaI	CCWGG	1 cut(s)	882
MvnI	CGCG	1 cut(s)	605
MwoI	GCNNNNNNNGC	5 cut(s)	87, 293, 497, 506, 1073
NciI	CCSGG	1 cut(s)	469
NdeII	GATC	4 cut(s)	176, 931, 985, 1168
NlaIII	CATG	2 cut(s)	543, 826
NlaIV	GGNNCC	4 cut(s)	591, 645, 726, 1039
NmuCI	GTSAC	2 cut(s)	437, 898
NruI	TCGCGA	1 cut(s)	605
NspI	RCATGY	1 cut(s)	543
PfeI	GAWTC	1 cut(s)	736
PkrI	GCNGC	8 cut(s)	18, 21, 89, 490, 1069, 1072, 1075, 1091
PleI	GAGTC	5 cut(s)	46, 223, 253, 876, 895
PpsI	GAGTC	5 cut(s)	46, 223, 253, 876, 895
PpuMI	RGGWCCY	1 cut(s)	725
Psp5II	RGGWCCY	1 cut(s)	725
Psp6I	CCWGG	1 cut(s)	880
PspGI	CCWGG	1 cut(s)	880
PspN4I	GGNNCC	4 cut(s)	591, 645, 726, 1039
PspPI	GGNCC	3 cut(s)	589, 725, 878
PspPPI	RGGWCCY	1 cut(s)	725
PstNI	CAGNNNCTG	1 cut(s)	84
PsuI	RGATCY	1 cut(s)	985
RruI	TCGCGA	1 cut(s)	605
SaqAI	TTAA	6 cut(s)	75, 615, 791, 894, 1010, 1219
SatI	GCNGC	8 cut(s)	17, 20, 88, 489, 1068, 1071, 1074, 1090
Sau3AI	GATC	4 cut(s)	176, 931, 985, 1168
Sau96I	GGNCC	3 cut(s)	589, 725, 878
SchI	GAGTC	5 cut(s)	46, 224, 254, 877, 895
ScrFI	CCNGG	2 cut(s)	469, 882
SduI	GDGCHC	1 cut(s)	157
SfaNI	GCATC	3 cut(s)	274, 947, 1039
SfcI	CTRYAG	1 cut(s)	963
SinI	GGWCC	3 cut(s)	589, 725, 878
Sse9I	AATT	4 cut(s)	351, 579, 782, 948
SsiI	CCGC	3 cut(s)	17, 58, 1089
SspMI	CTAG	1 cut(s)	744
StyD4I	CCNGG	2 cut(s)	467, 880
StyI	CCWWGG	1 cut(s)	874
TaaI	ACNGT	7 cut(s)	159, 166, 386, 454, 709, 964, 1210
TaqI	TCGA	2 cut(s)	955, 1187
TasI	AATT	4 cut(s)	351, 579, 782, 948
TauI	GCSGC	2 cut(s)	19, 1092
TfiI	GAWTC	1 cut(s)	736
Tru1I	TTAA	6 cut(s)	75, 615, 791, 894, 1010, 1219
Tru9I	TTAA	6 cut(s)	75, 615, 791, 894, 1010, 1219
TscAI	CASTG	4 cut(s)	12, 145, 169, 967
TseFI	GTSAC	2 cut(s)	437, 898
TseI	GCWGC	6 cut(s)	19, 87, 488, 1067, 1070, 1073
Tsp45I	GTSAC	2 cut(s)	437, 898
TspDTI	ATGAA	6 cut(s)	36, 252, 360, 633, 680, 839
TspGWI	ACGGA	1 cut(s)	456
TspRI	CASTG	4 cut(s)	12, 145, 169, 967
VneI	GTGCAC	1 cut(s)	153
VpaK11BI	GGWCC	3 cut(s)	589, 725, 878
XapI	RAATTY	1 cut(s)	948
XceI	RCATGY	1 cut(s)	543
XmiI	GTMKAC	1 cut(s)	771
XspI	CTAG	1 cut(s)	744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.