Rorug07G0008900

Anthranilate phosphoribosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
732515 .. 736065
3551 bp
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UTR
Exon/CDS
Intron
Rorug07G0008900.1

Sequence Viewer

Length: 321 bp
ATGTCTCAATGCTTGTCACAAGCACTTGAAGTTGCTTCTGGCCATCAATTAGCTGTGGCATATTGTGTACGATCACTTTGCACCGAGGAATATGAACCAAACTCAGAGAAAGTGTTTCAAGATATTCAGTCTGCCCTTGTTGTGTGGTCGAGCATTCCTACTTCAGATGGCTCCATGGTGCCTGAAAATATAATGAAGATACTTTATTCTGTAATTGATTTGTTATCCCTCAAGGTAGGGGTTATCCATGAAATACTGGGAAATGGAGCTGAGGCCGAATATTTTTTTGGATCGGGGAAAAAGTCTTTCCTGCTCACATAG

Protein Analysis

106

Amino Acids

11.56

Weight (kDa)

4.66

Isoelectric Point (pI)

47.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 178
AclWI GGATC 1 cut(s) 298
AcoI YGGCCR 1 cut(s) 40
AcuI CTGAAG 1 cut(s) 147
AfaI GTAC 1 cut(s) 69
AgsI TTSAA 2 cut(s) 29, 119
AjuI GAANNNNNNNTTGG 2 cut(s) 270, 302
AluBI AGCT 2 cut(s) 53, 269
AluI AGCT 2 cut(s) 53, 269
Alw26I GTCTC 1 cut(s) 9
AlwI GGATC 1 cut(s) 298
AoxI GGCC 2 cut(s) 40, 273
BalI TGGCCA 1 cut(s) 42
BanI GGYRCC 1 cut(s) 178
BbvCI CCTCAGC 1 cut(s) 270
BccI CCATC 2 cut(s) 51, 161
BcgI CGANNNNNNTGC 2 cut(s) 60, 94
BcoDI GTCTC 1 cut(s) 9
BmiI GGNNCC 2 cut(s) 172, 180
BmrI ACTGGG 1 cut(s) 266
BmuI ACTGGG 1 cut(s) 266
Bpu10I CCTNAGC 1 cut(s) 270
BpuEI CTTGAG 1 cut(s) 215
BsaJI CCNNGG 2 cut(s) 84, 174
Bse1I ACTGG 1 cut(s) 261
BseDI CCNNGG 2 cut(s) 84, 174
BseMII CTCAG 2 cut(s) 117, 261
BseNI ACTGG 1 cut(s) 261
BshFI GGCC 2 cut(s) 42, 275
BshNI GGYRCC 1 cut(s) 178
BsmAI GTCTC 1 cut(s) 9
BsmI GAATGC 1 cut(s) 153
BsnI GGCC 2 cut(s) 42, 275
Bsp143I GATC 2 cut(s) 71, 290
Bsp19I CCATGG 1 cut(s) 174
BspANI GGCC 2 cut(s) 42, 275
BspCNI CTCAG 2 cut(s) 116, 262
BspLI GGNNCC 2 cut(s) 172, 180
BspPI GGATC 1 cut(s) 298
BspT107I GGYRCC 1 cut(s) 178
BsrI ACTGG 1 cut(s) 261
BssECI CCNNGG 2 cut(s) 84, 174
BssMI GATC 2 cut(s) 71, 290
BssT1I CCWWGG 1 cut(s) 174
BstDEI CTNAG 2 cut(s) 103, 270
BstDSI CCRYGG 1 cut(s) 174
BstKTI GATC 2 cut(s) 74, 293
BstMAI GTCTC 1 cut(s) 9
BstMBI GATC 2 cut(s) 71, 290
BsuRI GGCC 2 cut(s) 42, 275
BtgI CCRYGG 1 cut(s) 174
Csp6I GTAC 1 cut(s) 68
CviAII CATG 2 cut(s) 175, 248
CviJI RGCY 5 cut(s) 42, 53, 171, 269, 275
CviKI_1 RGCY 5 cut(s) 42, 53, 171, 269, 275
CviQI GTAC 1 cut(s) 68
DdeI CTNAG 2 cut(s) 103, 270
DpnI GATC 2 cut(s) 73, 292
DpnII GATC 2 cut(s) 71, 290
EaeI YGGCCR 1 cut(s) 40
Eco130I CCWWGG 1 cut(s) 174
Eco57I CTGAAG 1 cut(s) 147
EcoT14I CCWWGG 1 cut(s) 174
ErhI CCWWGG 1 cut(s) 174
FaeI CATG 2 cut(s) 178, 251
FaiI YATR 6 cut(s) 61, 93, 176, 191, 249, 319
FatI CATG 2 cut(s) 174, 247
HaeIII GGCC 2 cut(s) 42, 275
Hin1II CATG 2 cut(s) 178, 251
Hpy166II GTNNAC 1 cut(s) 68
Hpy188I TCNGA 2 cut(s) 106, 166
Hpy188III TCNNGA 1 cut(s) 119
Hpy8I GTNNAC 1 cut(s) 68
HpyCH4V TGCA 1 cut(s) 81
HpyF3I CTNAG 2 cut(s) 103, 270
Hsp92II CATG 2 cut(s) 178, 251
Kzo9I GATC 2 cut(s) 71, 290
LmnI GCTCC 2 cut(s) 176, 266
LpnPI CCDG 3 cut(s) 24, 195, 242
MaeIII GTNAC 1 cut(s) 15
MalI GATC 2 cut(s) 73, 292
MboI GATC 2 cut(s) 71, 290
MboII GAAGA 1 cut(s) 208
MlsI TGGCCA 1 cut(s) 42
MluCI AATT 2 cut(s) 47, 213
MluNI TGGCCA 1 cut(s) 42
MnlI CCTC 3 cut(s) 79, 239, 265
Mox20I TGGCCA 1 cut(s) 42
MscI TGGCCA 1 cut(s) 42
Msp20I TGGCCA 1 cut(s) 42
Mva1269I GAATGC 1 cut(s) 153
NcoI CCATGG 1 cut(s) 174
NdeII GATC 2 cut(s) 71, 290
NlaIII CATG 2 cut(s) 178, 251
NlaIV GGNNCC 2 cut(s) 172, 180
NmuCI GTSAC 1 cut(s) 15
PctI GAATGC 1 cut(s) 153
PspN4I GGNNCC 2 cut(s) 172, 180
RsaI GTAC 1 cut(s) 69
RsaNI GTAC 1 cut(s) 68
Sau3AI GATC 2 cut(s) 71, 290
SetI ASST 3 cut(s) 55, 237, 271
SmlI CTYRAG 1 cut(s) 230
SmoI CTYRAG 1 cut(s) 230
Sse9I AATT 2 cut(s) 47, 213
SspI AATATT 1 cut(s) 281
StyI CCWWGG 1 cut(s) 174
TaqI TCGA 1 cut(s) 149
TasI AATT 2 cut(s) 47, 213
TseFI GTSAC 1 cut(s) 15
Tsp45I GTSAC 1 cut(s) 15
TspDTI ATGAA 3 cut(s) 108, 209, 264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.