FvH4_5g05490

Anthranilate phosphoribosyltransferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
3229597 .. 3235077
5481 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g05490.t1

Sequence Viewer

Length: 1215 bp
ATGGCAGTGTCAACACATCTTCACTCTCTTACAAGTCTTGCTTCGTTGACTCACCGCACTAAGCTGTTCAACAGCTCATGCTGCACTTCCCTGTTTCCCAATGCAAAGCAAACAAGCCCATCAACGCTGTGCAGTGCTGTGCTCTCCGGACACTCCACTGTTTCCGCGGGATCAAAACCACCGTTTTCTTCCTTCAATGAGTTGATTGAGTCCCTGATTGATAAGAAGGATTTATCGGAGTCGGAATCGGAAGCTGCAATGGAGTTCTTGCTGAGTGATACTAATGAGGCTTTGATTAGCGCCTTTCTTGTGCTGTTGAGAGCCAAAGGAGAGACTTATGAAGAAATTGTGGGATTGGCAAAGGCAATGATGAAACACAGTTTACCGATTGAGGGATTGGATGATGCAGTTGACATTGTCGGAACTGGAGGTGATGGCGCAAACACAGTAAACATTTCCACAGGGGCTTCAATACTTGCTGCAGCATGTGGTGCTAAAGTTGCAAAGCAAGGTAATCGTTCAAGTTCTTCTGCATGTGGAAGTGCAGATGTATTGGAAGCTTTGGACATAGTCATTGAATTGGGCCCTCAGGAGGTCAAGAGATGTGTTAATGAAGTGGGCATTGGTTTTATGATGGCACCAAAGTATCATTCAGCAATGAGGATCGTTCGTCCTGTGAGGAAAAAACTAAAAGTAAAAACTGTATTCAACATTTTGGGACCTATGTTGAATCCGGCAAAAGTCCCTTTTGCCGTAGTTGGTGTATACACTGAAGATTTGGTCTTGAAGATGGCTGAAGCATTACAAAGCTTTGGCATGAAAAGAGCATTGGTTGTTCATTCTGAGGGACTGGACGAAATGAGTCCTCTCGGACCTGGACTTATCCTTGATGTGACTCCTAACAAGATTGAGAAGTTCTCCTTCGATCCATTGGACTTTGGAATTCCTCGATGCACTGTAGATGATTTGCGAGGTGGAGGTCCAGAGTATAATGCTGAGGCATTAAAGCGTGTACTGTCAGGAGAAAAAGGTTCCGTTGCAGATGCACTTATCCTAAATGCAGCAGCAGCTCTTTTAGTTAGCGGCCGTGTTACAAATTTAGCTGAAGGAGTTCTTTTGGCTCGTGATACACAACGTTCAGGGAAAGCTATCAAGACGCTCGATCATTGGGTATCTATCACAAAAACAATGAGGCCAGATTCAGTTGTTTATTAA

Protein Analysis

405

Amino Acids

42.8

Weight (kDa)

6.27

Isoelectric Point (pI)

40.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glycos_trans_3N PF02885 67 - 126 4.7e-17 Glycosyl transferase family, helical bundle domain
Glycos_transf_3 PF00591 134 - 383 1.6e-97 Glycosyl transferase family, a/b domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 637
AccI GTMKAC 1 cut(s) 765
AccII CGCG 1 cut(s) 167
AccIII TCCGGA 1 cut(s) 146
AciI CCGC 4 cut(s) 55, 165, 167, 1083
AclI AACGTT 1 cut(s) 1135
AclWI GGATC 3 cut(s) 178, 671, 920
AcoI YGGCCR 1 cut(s) 1084
AcsI RAATTY 2 cut(s) 942, 1096
AcuI CTGAAG 3 cut(s) 792, 816, 1125
AfaI GTAC 1 cut(s) 1014
AfiI CCNNNNNNNGG 2 cut(s) 392, 592
AgsI TTSAA 8 cut(s) 70, 196, 471, 522, 578, 709, 730, 787
AjnI CCWGG 1 cut(s) 874
AjuI GAANNNNNNNTTGG 6 cut(s) 606, 634, 638, 666, 812, 844
AluBI AGCT 8 cut(s) 64, 75, 254, 560, 810, 1070, 1103, 1148
AluI AGCT 8 cut(s) 64, 75, 254, 560, 810, 1070, 1103, 1148
Alw21I GWGCWC 1 cut(s) 144
Alw26I GTCTC 1 cut(s) 326
AlwI GGATC 3 cut(s) 178, 671, 920
Aor13HI TCCGGA 1 cut(s) 146
AoxI GGCC 3 cut(s) 583, 1084, 1193
ApaI GGGCCC 1 cut(s) 587
ApeKI GCWGC 7 cut(s) 81, 254, 479, 482, 1061, 1064, 1067
ApoI RAATTY 2 cut(s) 942, 1096
Asp700I GAANNNNTTC 1 cut(s) 1110
AspLEI GCGC 2 cut(s) 302, 440
AspS9I GGNCC 5 cut(s) 583, 584, 719, 872, 980
AsuHPI GGTGA 2 cut(s) 44, 443
AvaII GGWCC 3 cut(s) 719, 872, 980
AxyI CCTNAGG 1 cut(s) 588
BaeGI GKGCMC 1 cut(s) 587
BaeI ACNNNNGTAYC 2 cut(s) 629, 662
BanI GGYRCC 1 cut(s) 637
BanII GRGCYC 1 cut(s) 587
BauI CACGAG 1 cut(s) 1122
Bbv12I GWGCWC 1 cut(s) 144
BbvCI CCTCAGC 1 cut(s) 996
BbvI GCAGC 7 cut(s) 68, 241, 466, 494, 1073, 1076, 1079
BccI CCATC 4 cut(s) 127, 428, 628, 784
BceAI ACGGC 2 cut(s) 737, 1071
BcgI CGANNNNNNTGC 2 cut(s) 497, 531
BciT130I CCWGG 1 cut(s) 876
BcoDI GTCTC 1 cut(s) 326
BfmI CTRYAG 2 cut(s) 480, 957
BfoI RGCGCY 1 cut(s) 303
BisI GCNGC 8 cut(s) 82, 255, 480, 483, 1062, 1065, 1068, 1084
BlsI GCNGC 8 cut(s) 83, 256, 481, 484, 1063, 1066, 1069, 1085
Bme1390I CCNGG 1 cut(s) 876
Bme18I GGWCC 3 cut(s) 719, 872, 980
BmgT120I GGNCC 5 cut(s) 583, 584, 719, 872, 980
BmiI GGNNCC 4 cut(s) 585, 639, 720, 1033
BmrFI CCNGG 1 cut(s) 876
BmsI GCATC 3 cut(s) 394, 941, 1033
BplI GAGNNNNNCTC 2 cut(s) 902, 934
BpmI CTGGAG 1 cut(s) 447
Bpu10I CCTNAGC 1 cut(s) 996
BsaJI CCNNGG 1 cut(s) 165
BsaWI WCCGGW 1 cut(s) 146
Bsc4I CCNNNNNNNGG 2 cut(s) 392, 592
Bse1I ACTGG 2 cut(s) 430, 855
Bse21I CCTNAGG 1 cut(s) 588
Bse3DI GCAATG 3 cut(s) 264, 372, 663
BseAI TCCGGA 1 cut(s) 146
BseBI CCWGG 1 cut(s) 876
BseDI CCNNGG 1 cut(s) 165
BseGI GGATG 1 cut(s) 406
BseLI CCNNNNNNNGG 2 cut(s) 392, 592
BseMI GCAATG 3 cut(s) 264, 372, 663
BseMII CTCAG 4 cut(s) 263, 602, 834, 987
BseNI ACTGG 2 cut(s) 430, 855
BseSI GKGCMC 1 cut(s) 587
BseX3I CGGCCG 1 cut(s) 1084
BseXI GCAGC 7 cut(s) 68, 241, 466, 494, 1073, 1076, 1079
BsgI GTGCAG 3 cut(s) 67, 151, 564
Bsh1236I CGCG 1 cut(s) 167
Bsh1285I CGRYCG 1 cut(s) 1087
BshFI GGCC 3 cut(s) 585, 1086, 1195
BshNI GGYRCC 1 cut(s) 637
BsiEI CGRYCG 1 cut(s) 1087
BsiHKAI GWGCWC 1 cut(s) 144
BsiSI CCGG 2 cut(s) 147, 734
BslFI GGGAC 4 cut(s) 196, 728, 732, 861
BslI CCNNNNNNNGG 2 cut(s) 392, 592
BsmAI GTCTC 1 cut(s) 326
BsmFI GGGAC 4 cut(s) 196, 728, 732, 861
BsnI GGCC 3 cut(s) 585, 1086, 1195
Bsp120I GGGCCC 1 cut(s) 583
Bsp1286I GDGCHC 2 cut(s) 144, 587
Bsp13I TCCGGA 1 cut(s) 146
Bsp143I GATC 4 cut(s) 170, 663, 925, 1162
BspACI CCGC 4 cut(s) 55, 165, 167, 1083
BspANI GGCC 3 cut(s) 585, 1086, 1195
BspCNI CTCAG 4 cut(s) 264, 601, 835, 988
BspEI TCCGGA 1 cut(s) 146
BspFNI CGCG 1 cut(s) 167
BspLI GGNNCC 4 cut(s) 585, 639, 720, 1033
BspMAI CTGCAG 1 cut(s) 484
BspPI GGATC 3 cut(s) 178, 671, 920
BspT107I GGYRCC 1 cut(s) 637
BsrDI GCAATG 3 cut(s) 264, 372, 663
BsrI ACTGG 2 cut(s) 430, 855
BssECI CCNNGG 1 cut(s) 165
BssMI GATC 4 cut(s) 170, 663, 925, 1162
BssNAI GTATAC 1 cut(s) 766
BssSI CACGAG 1 cut(s) 1122
Bst1107I GTATAC 1 cut(s) 766
Bst2BI CACGAG 1 cut(s) 1122
Bst2UI CCWGG 1 cut(s) 876
Bst4CI ACNGT 7 cut(s) 160, 183, 380, 448, 703, 958, 1017
BstAPI GCANNNNNTGC 1 cut(s) 491
BstDEI CTNAG 5 cut(s) 60, 272, 588, 843, 996
BstDSI CCRYGG 1 cut(s) 165
BstF5I GGATG 1 cut(s) 406
BstFNI CGCG 1 cut(s) 167
BstH2I RGCGCY 1 cut(s) 303
BstHHI GCGC 2 cut(s) 302, 440
BstKTI GATC 4 cut(s) 173, 666, 928, 1165
BstMAI GTCTC 1 cut(s) 326
BstMBI GATC 4 cut(s) 170, 663, 925, 1162
BstMCI CGRYCG 1 cut(s) 1087
BstMWI GCNNNNNNNGC 4 cut(s) 81, 491, 500, 1067
BstNI CCWGG 1 cut(s) 876
BstNSI RCATGY 2 cut(s) 489, 537
BstSCI CCNGG 1 cut(s) 874
BstSFI CTRYAG 2 cut(s) 480, 957
BstSLI GKGCMC 1 cut(s) 587
BstUI CGCG 1 cut(s) 167
BstV1I GCAGC 7 cut(s) 68, 241, 466, 494, 1073, 1076, 1079
BstZ17I GTATAC 1 cut(s) 766
BstZI CGGCCG 1 cut(s) 1084
Bsu36I CCTNAGG 1 cut(s) 588
BsuRI GGCC 3 cut(s) 585, 1086, 1195
BtgI CCRYGG 1 cut(s) 165
BtsCI GGATG 1 cut(s) 406
BtsI GCAGTG 2 cut(s) 12, 139
BtsIMutI CAGTG 5 cut(s) 12, 139, 156, 768, 954
CfoI GCGC 2 cut(s) 302, 440
Cfr13I GGNCC 5 cut(s) 583, 584, 719, 872, 980
Cfr42I CCGCGG 1 cut(s) 168
CseI GACGC 1 cut(s) 1165
Csp6I GTAC 1 cut(s) 1013
CviAII CATG 4 cut(s) 78, 486, 534, 817
CviQI GTAC 1 cut(s) 1013
DdeI CTNAG 5 cut(s) 60, 272, 588, 843, 996
DpnI GATC 4 cut(s) 172, 665, 927, 1164
DpnII GATC 4 cut(s) 170, 663, 925, 1162
EaeI YGGCCR 1 cut(s) 1084
EagI CGGCCG 1 cut(s) 1084
EclXI CGGCCG 1 cut(s) 1084
Eco24I GRGCYC 1 cut(s) 587
Eco47I GGWCC 3 cut(s) 719, 872, 980
Eco52I CGGCCG 1 cut(s) 1084
Eco57I CTGAAG 3 cut(s) 792, 816, 1125
Eco81I CCTNAGG 1 cut(s) 588
EcoO109I RGGNCCY 2 cut(s) 584, 719
EcoRI GAATTC 1 cut(s) 942
EcoRII CCWGG 1 cut(s) 874
EcoT38I GRGCYC 1 cut(s) 587
FaeI CATG 4 cut(s) 81, 489, 537, 820
FalI AAGNNNNNCTT 6 cut(s) 25, 57, 905, 937, 1098, 1130
FaqI GGGAC 4 cut(s) 196, 728, 732, 861
FatI CATG 4 cut(s) 77, 485, 533, 816
FauI CCCGC 1 cut(s) 160
FblI GTMKAC 1 cut(s) 765
Fnu4HI GCNGC 8 cut(s) 82, 255, 480, 483, 1062, 1065, 1068, 1084
FokI GGATG 1 cut(s) 413
FriOI GRGCYC 1 cut(s) 587
Fsp4HI GCNGC 8 cut(s) 82, 255, 480, 483, 1062, 1065, 1068, 1084
GlaI GCGC 2 cut(s) 301, 439
GluI GCNGC 8 cut(s) 82, 255, 480, 483, 1062, 1065, 1068, 1084
GsuI CTGGAG 1 cut(s) 447
HaeII RGCGCY 1 cut(s) 303
HaeIII GGCC 3 cut(s) 585, 1086, 1195
HapII CCGG 2 cut(s) 147, 734
HgaI GACGC 1 cut(s) 1165
HhaI GCGC 2 cut(s) 302, 440
Hin1II CATG 4 cut(s) 81, 489, 537, 820
Hin6I GCGC 2 cut(s) 300, 438
HinP1I GCGC 2 cut(s) 300, 438
HincII GTYRAC 3 cut(s) 12, 48, 412
HindII GTYRAC 3 cut(s) 12, 48, 412
HindIII AAGCTT 2 cut(s) 558, 808
HinfI GANTC 8 cut(s) 49, 209, 239, 245, 730, 862, 895, 1199
HpaII CCGG 2 cut(s) 147, 734
HphI GGTGA 2 cut(s) 44, 443
Hpy166II GTNNAC 7 cut(s) 12, 48, 383, 412, 451, 766, 1013
Hpy188I TCNGA 6 cut(s) 238, 244, 250, 422, 844, 872
Hpy188III TCNNGA 8 cut(s) 147, 590, 598, 784, 983, 1020, 1124, 1153
Hpy8I GTNNAC 7 cut(s) 12, 48, 383, 412, 451, 766, 1013
HpyAV CCTTC 4 cut(s) 202, 220, 931, 1100
HpyCH4III ACNGT 7 cut(s) 160, 183, 380, 448, 703, 958, 1017
HpyCH4IV ACGT 1 cut(s) 1135
HpyF10VI GCNNNNNNNGC 4 cut(s) 81, 491, 500, 1067
HpyF3I CTNAG 5 cut(s) 60, 272, 588, 843, 996
HpySE526I ACGT 1 cut(s) 1135
Hsp92II CATG 4 cut(s) 81, 489, 537, 820
HspAI GCGC 2 cut(s) 300, 438
Kpn2I TCCGGA 1 cut(s) 146
KspI CCGCGG 1 cut(s) 168
Kzo9I GATC 4 cut(s) 170, 663, 925, 1162
Lsp1109I GCAGC 7 cut(s) 68, 241, 466, 494, 1073, 1076, 1079
LweI GCATC 3 cut(s) 394, 941, 1033
MaeII ACGT 1 cut(s) 1135
MaeIII GTNAC 2 cut(s) 892, 1090
MalI GATC 4 cut(s) 172, 665, 927, 1164
MboI GATC 4 cut(s) 170, 663, 925, 1162
MboII GAAGA 6 cut(s) 11, 180, 353, 519, 785, 799
MhlI GDGCHC 2 cut(s) 144, 587
MluCI AATT 4 cut(s) 345, 578, 942, 1096
MlyI GAGTC 5 cut(s) 43, 218, 248, 871, 889
MmeI TCCRAC 2 cut(s) 222, 400
MroI TCCGGA 1 cut(s) 146
MroXI GAANNNNTTC 1 cut(s) 1110
MseI TTAA 3 cut(s) 609, 1004, 1213
MspA1I CMGCKG 1 cut(s) 167
MspI CCGG 2 cut(s) 147, 734
MspR9I CCNGG 1 cut(s) 876
MvaI CCWGG 1 cut(s) 876
MvnI CGCG 1 cut(s) 167
MwoI GCNNNNNNNGC 4 cut(s) 81, 491, 500, 1067
NdeII GATC 4 cut(s) 170, 663, 925, 1162
NlaIII CATG 4 cut(s) 81, 489, 537, 820
NlaIV GGNNCC 4 cut(s) 585, 639, 720, 1033
NmuCI GTSAC 1 cut(s) 892
NspI RCATGY 2 cut(s) 489, 537
PdmI GAANNNNTTC 1 cut(s) 1110
PfeI GAWTC 3 cut(s) 245, 730, 1199
PflFI GACNNNGTC 2 cut(s) 416, 569
PkrI GCNGC 8 cut(s) 83, 256, 481, 484, 1063, 1066, 1069, 1085
PleI GAGTC 5 cut(s) 43, 217, 247, 870, 889
PpsI GAGTC 5 cut(s) 43, 217, 247, 870, 889
PpuMI RGGWCCY 1 cut(s) 719
Psp1406I AACGTT 1 cut(s) 1135
Psp5II RGGWCCY 1 cut(s) 719
Psp6I CCWGG 1 cut(s) 874
PspGI CCWGG 1 cut(s) 874
PspN4I GGNNCC 4 cut(s) 585, 639, 720, 1033
PspOMI GGGCCC 1 cut(s) 583
PspPI GGNCC 5 cut(s) 583, 584, 719, 872, 980
PspPPI RGGWCCY 1 cut(s) 719
PstI CTGCAG 1 cut(s) 484
PsyI GACNNNGTC 2 cut(s) 416, 569
RsaI GTAC 1 cut(s) 1014
RsaNI GTAC 1 cut(s) 1013
SacII CCGCGG 1 cut(s) 168
SaqAI TTAA 3 cut(s) 609, 1004, 1213
SatI GCNGC 8 cut(s) 82, 255, 480, 483, 1062, 1065, 1068, 1084
Sau3AI GATC 4 cut(s) 170, 663, 925, 1162
Sau96I GGNCC 5 cut(s) 583, 584, 719, 872, 980
SchI GAGTC 5 cut(s) 43, 218, 248, 871, 889
ScrFI CCNGG 1 cut(s) 876
SduI GDGCHC 2 cut(s) 144, 587
SfaNI GCATC 3 cut(s) 394, 941, 1033
SfcI CTRYAG 2 cut(s) 480, 957
Sfr303I CCGCGG 1 cut(s) 168
SgrBI CCGCGG 1 cut(s) 168
SinI GGWCC 3 cut(s) 719, 872, 980
Sse9I AATT 4 cut(s) 345, 578, 942, 1096
SsiI CCGC 4 cut(s) 55, 165, 167, 1083
StyD4I CCNGG 1 cut(s) 874
TaaI ACNGT 7 cut(s) 160, 183, 380, 448, 703, 958, 1017
TaiI ACGT 1 cut(s) 1138
TaqI TCGA 3 cut(s) 924, 949, 1161
TasI AATT 4 cut(s) 345, 578, 942, 1096
TatI WGTACW 1 cut(s) 1012
TauI GCSGC 1 cut(s) 1086
TfiI GAWTC 3 cut(s) 245, 730, 1199
Tru1I TTAA 3 cut(s) 609, 1004, 1213
Tru9I TTAA 3 cut(s) 609, 1004, 1213
TscAI CASTG 5 cut(s) 12, 139, 163, 775, 961
TseFI GTSAC 1 cut(s) 892
TseI GCWGC 7 cut(s) 81, 254, 479, 482, 1061, 1064, 1067
Tsp45I GTSAC 1 cut(s) 892
TspDTI ATGAA 5 cut(s) 354, 386, 627, 827, 833
TspGWI ACGGA 1 cut(s) 1024
TspRI CASTG 5 cut(s) 12, 139, 163, 775, 961
Tth111I GACNNNGTC 2 cut(s) 416, 569
VpaK11BI GGWCC 3 cut(s) 719, 872, 980
XapI RAATTY 2 cut(s) 942, 1096
XceI RCATGY 2 cut(s) 489, 537
XmiI GTMKAC 1 cut(s) 765
XmnI GAANNNNTTC 1 cut(s) 1110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.