AT5G19500

Tryptophan/tyrosine permease family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0004761
Physical Location & Seq
Forward (+)
6578890 .. 6581945
3056 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G19500.1

Sequence Viewer

Length: 1518 bp
ATGTCTGTGTCTCTAAGCTACACTTGTCTTCTTAGATTACCCACCTTTTCAGTTCCAACGAAACCCATTAGTTTCAATGGACCTCTCCCTTTTTATCTACCAAGATCTCATATTTCCTCATCTTGTTTTGGTTTCAAATCAAACCCATTCATAAGAACTCAGACCCCAAGATTCTTCAAGTGTTTGCCTCAGAGAGTGTCTGATGAACGCAGAGAAACACAAGTAACAACAGAAGAAGAAGAAGAAGATGAGGAAGAAAAGATTGTCGTATTTGAGAGGCTCTTCTCTAACCTGAATCAATCAACATTGAAGCGAGAATCCGGAAGTTTGTCCAGTGCAATTTTCTTGGTTGCTGGCACTACCGTAGGTGCAGGGATACTTGCGATTCCAGCTGTGACACAAGAATCAGGTTTTCTAGCCTCTGCAGTCGCCTGCATTCTCTGTTGGGCCTTCATGGTTGTGACAGGTTTGCTGGTTGCAGAAGTAAATGTCAACACCATGAGTGAACTAGGCTCTGGAGGCGTATCTCTTGTCTCAATGGCGAAGCGGACTCTTGGGTCTGTTGGAGTTCAAGTTGTTTCTTGGTCTTATCTTCTCATACATTACACCCTTCTTGTGGCTTACATTGCTCGGTCATCAGGCATCCTTACCAACTTCCTCGGCATTCCGATATGGGAGAGTGCAACTCTATTCTCACTGATCTTCGGAGGCCTTTGCTTCTTTGGAAGCCAGCGATTCATCGGTGCAGCCAATGGAGTTCTGGTGTTTGGAGTAATTGCATCGTTTGCAGCACTCGTGGCAGTTGCAAGTGGAGACTTACACTGGGAAGCTCTTCTCAAGGCTAACTTTGAGGCCGTTCCCATGAGTGTACCCATCATTGCTCTGTCATTTGTTTATCAGAATGTGGTGCCGGTTCTCTGCACAGATCTTGAAGGAGACTTGCCGAGAGTAAGAACCGCCATCGTTCTTGGCACAGCCATACCACTTGGCTTGTTTCTTGTGTGGGACGCTGTGATTCTTGGATCGTTTCCAGTAGATACTGGGGTGGCTGTTGAGAAGATGGTCGATCCTCTGCAACAATTGAGATCAAGTAGTGTCACTGTCGGTCCGTTTGTGGAAGCATTCTCTCTTTTTGCAATCGCAACATCTTATATAGGGTTTGTCTTAGGCCTCTCTGATTTCTTCTCTGACTTATTGAAGCTCCCGAGTGGCCAGAACAAGCCTCTTCTTTACTTGCTTACTCTCGTTCCACCGCTTGTTCTGTCCCTACTGGATCCAGAGATTTTCTTCAAGGCCTTAGATTTTGCCGGGACATATGGAGTTCTGGTATTGTTCGGAATCCTCCCAGCAGCAATGTCTTGGTCAGATAGGTACATAGTCTCATCATCAACAGTGACAAGATTACCTCAACTTGTTCCCGGAGGAAAACTCACCCTTTCTCTGGTTATGGGAGCTGCAGGATACGTAATTATTTCTGAAGTAATAGAGAATTTGTCAAAGTATCTAAATGTTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Trp_Tyr_perm

Protein Analysis

505

Amino Acids

54.36

Weight (kDa)

5.21

Isoelectric Point (pI)

41.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Trp_Tyr_perm PF03222 109 - 491 1.6e-71 Tryptophan/tyrosine permease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 556
AccB1I GGYRCC 1 cut(s) 907
AccIII TCCGGA 1 cut(s) 320
AciI CCGC 3 cut(s) 547, 957, 1253
AclWI GGATC 4 cut(s) 1030, 1061, 1268, 1281
AcoI YGGCCR 1 cut(s) 1210
AcsI RAATTY 1 cut(s) 1489
AcuI CTGAAG 1 cut(s) 1497
AfaI GTAC 2 cut(s) 870, 1373
AfiI CCNNNNNNNGG 2 cut(s) 616, 1441
AgsI TTSAA 8 cut(s) 76, 136, 178, 310, 572, 932, 1198, 1291
AluBI AGCT 5 cut(s) 18, 392, 830, 1201, 1454
AluI AGCT 5 cut(s) 18, 392, 830, 1201, 1454
Alw26I GTCTC 5 cut(s) 15, 538, 807, 930, 1384
AlwI GGATC 4 cut(s) 1030, 1061, 1268, 1281
Ama87I CYCGRG 1 cut(s) 1204
Aor13HI TCCGGA 1 cut(s) 320
AoxI GGCC 6 cut(s) 447, 709, 852, 1168, 1210, 1293
ApeKI GCWGC 4 cut(s) 746, 788, 1349, 1454
ApoI RAATTY 1 cut(s) 1489
Asp700I GAANNNNTTC 1 cut(s) 831
AspS9I GGNCC 3 cut(s) 80, 447, 1106
AsuC2I CCSGG 2 cut(s) 1309, 1419
AsuHPI GGTGA 1 cut(s) 1423
AvaI CYCGRG 1 cut(s) 1204
AvaII GGWCC 2 cut(s) 80, 1106
BaeI ACNNNNGTAYC 2 cut(s) 1029, 1062
BalI TGGCCA 1 cut(s) 1212
BamHI GGATCC 1 cut(s) 1273
BanI GGYRCC 1 cut(s) 907
BauI CACGAG 1 cut(s) 794
BbsI GAAGAC 1 cut(s) 20
BbvI GCAGC 4 cut(s) 758, 800, 1361, 1441
BccI CCATC 3 cut(s) 881, 968, 1054
BceAI ACGGC 1 cut(s) 839
BciVI GTATCC 2 cut(s) 369, 1454
BcnI CCSGG 2 cut(s) 1309, 1419
BcoDI GTCTC 5 cut(s) 15, 538, 807, 930, 1384
BfaI CTAG 2 cut(s) 416, 509
BfmI CTRYAG 2 cut(s) 423, 1455
BfuI GTATCC 2 cut(s) 369, 1454
BglII AGATCT 2 cut(s) 104, 925
BisI GCNGC 4 cut(s) 747, 789, 1350, 1455
BlsI GCNGC 4 cut(s) 748, 790, 1351, 1456
Bme1390I CCNGG 2 cut(s) 1309, 1419
Bme18I GGWCC 2 cut(s) 80, 1106
BmeT110I CYCGRG 1 cut(s) 1204
BmgT120I GGNCC 3 cut(s) 80, 447, 1106
BmiI GGNNCC 2 cut(s) 909, 1275
BmrFI CCNGG 2 cut(s) 1309, 1419
BmrI ACTGGG 2 cut(s) 832, 1050
BmsI GCATC 2 cut(s) 651, 788
BmuI ACTGGG 2 cut(s) 832, 1050
BpiI GAAGAC 1 cut(s) 20
BplI GAGNNNNNCTC 4 cut(s) 670, 702, 1413, 1445
BpmI CTGGAG 1 cut(s) 537
BpuEI CTTGAG 1 cut(s) 821
BpuMI CCSGG 2 cut(s) 1309, 1419
BsaAI YACGTR 1 cut(s) 1465
BsaJI CCNNGG 1 cut(s) 658
BsaWI WCCGGW 1 cut(s) 320
BsaXI ACNNNNNCTCC 6 cut(s) 558, 588, 747, 777, 1311, 1341
Bsc4I CCNNNNNNNGG 2 cut(s) 616, 1441
Bse118I RCCGGY 1 cut(s) 910
Bse1I ACTGG 5 cut(s) 333, 827, 1031, 1045, 1275
Bse3DI GCAATG 3 cut(s) 624, 876, 1359
BseAI TCCGGA 1 cut(s) 320
BseDI CCNNGG 1 cut(s) 658
BseGI GGATG 1 cut(s) 642
BseLI CCNNNNNNNGG 2 cut(s) 616, 1441
BseMI GCAATG 3 cut(s) 624, 876, 1359
BseMII CTCAG 2 cut(s) 173, 203
BseNI ACTGG 5 cut(s) 333, 827, 1031, 1045, 1275
BseXI GCAGC 4 cut(s) 758, 800, 1361, 1441
BseYI CCCAGC 1 cut(s) 1345
BsgI GTGCAG 3 cut(s) 390, 765, 904
BshFI GGCC 6 cut(s) 449, 711, 854, 1170, 1212, 1295
BshNI GGYRCC 1 cut(s) 907
BsiHKCI CYCGRG 1 cut(s) 1204
BsiSI CCGG 4 cut(s) 321, 911, 1308, 1419
BslFI GGGAC 3 cut(s) 1019, 1249, 1324
BslI CCNNNNNNNGG 2 cut(s) 616, 1441
BsmAI GTCTC 5 cut(s) 15, 538, 807, 930, 1384
BsmFI GGGAC 3 cut(s) 1019, 1249, 1324
BsmI GAATGC 3 cut(s) 435, 663, 1121
BsnI GGCC 6 cut(s) 449, 711, 854, 1170, 1212, 1295
BsoBI CYCGRG 1 cut(s) 1204
Bsp13I TCCGGA 1 cut(s) 320
Bsp143I GATC 7 cut(s) 104, 699, 925, 1022, 1066, 1085, 1273
BspACI CCGC 3 cut(s) 547, 957, 1253
BspANI GGCC 6 cut(s) 449, 711, 854, 1170, 1212, 1295
BspCNI CTCAG 2 cut(s) 172, 202
BspEI TCCGGA 1 cut(s) 320
BspLI GGNNCC 2 cut(s) 909, 1275
BspMAI CTGCAG 2 cut(s) 427, 1459
BspPI GGATC 4 cut(s) 1030, 1061, 1268, 1281
BspQI GCTCTTC 2 cut(s) 287, 837
BspT107I GGYRCC 1 cut(s) 907
BsrDI GCAATG 3 cut(s) 624, 876, 1359
BsrFI RCCGGY 1 cut(s) 910
BsrI ACTGG 5 cut(s) 333, 827, 1031, 1045, 1275
BssAI RCCGGY 1 cut(s) 910
BssECI CCNNGG 1 cut(s) 658
BssMI GATC 7 cut(s) 104, 699, 925, 1022, 1066, 1085, 1273
BssSI CACGAG 1 cut(s) 794
Bst2BI CACGAG 1 cut(s) 794
Bst4CI ACNGT 3 cut(s) 364, 1102, 1393
Bst6I CTCTTC 3 cut(s) 287, 837, 1230
BstAPI GCANNNNNTGC 1 cut(s) 785
BstBAI YACGTR 1 cut(s) 1465
BstC8I GCNNGC 3 cut(s) 355, 433, 731
BstDEI CTNAG 6 cut(s) 14, 32, 159, 189, 1165, 1297
BstF5I GGATG 1 cut(s) 642
BstKTI GATC 7 cut(s) 107, 702, 928, 1025, 1069, 1088, 1276
BstMAI GTCTC 5 cut(s) 15, 538, 807, 930, 1384
BstMBI GATC 7 cut(s) 104, 699, 925, 1022, 1066, 1085, 1273
BstMWI GCNNNNNNNGC 5 cut(s) 389, 519, 626, 785, 797
BstSCI CCNGG 2 cut(s) 1307, 1417
BstSFI CTRYAG 2 cut(s) 423, 1455
BstSNI TACGTA 1 cut(s) 1465
BstV1I GCAGC 4 cut(s) 758, 800, 1361, 1441
BstV2I GAAGAC 1 cut(s) 20
BstX2I RGATCY 3 cut(s) 104, 925, 1273
BstYI RGATCY 3 cut(s) 104, 925, 1273
BsuI GTATCC 2 cut(s) 369, 1454
BsuRI GGCC 6 cut(s) 449, 711, 854, 1170, 1212, 1295
BtsCI GGATG 1 cut(s) 642
BtsIMutI CAGTG 5 cut(s) 340, 695, 820, 1098, 1398
Cac8I GCNNGC 3 cut(s) 355, 433, 731
Cfr10I RCCGGY 1 cut(s) 910
Cfr13I GGNCC 3 cut(s) 80, 447, 1106
CpoI CGGWCCG 1 cut(s) 1106
CseI GACGC 1 cut(s) 1016
Csp6I GTAC 2 cut(s) 869, 1372
CspCI CAANNNNNGTGG 2 cut(s) 972, 1007
CspI CGGWCCG 1 cut(s) 1106
CviAII CATG 3 cut(s) 454, 499, 862
CviQI GTAC 2 cut(s) 869, 1372
DdeI CTNAG 6 cut(s) 14, 32, 159, 189, 1165, 1297
DpnI GATC 7 cut(s) 106, 701, 927, 1024, 1068, 1087, 1275
DpnII GATC 7 cut(s) 104, 699, 925, 1022, 1066, 1085, 1273
DrdI GACNNNNNNGTC 1 cut(s) 556
DseDI GACNNNNNNGTC 1 cut(s) 556
EaeI YGGCCR 1 cut(s) 1210
Eam1104I CTCTTC 3 cut(s) 287, 837, 1230
EarI CTCTTC 3 cut(s) 287, 837, 1230
Eco105I TACGTA 1 cut(s) 1465
Eco147I AGGCCT 3 cut(s) 711, 1170, 1295
Eco47I GGWCC 2 cut(s) 80, 1106
Eco57I CTGAAG 1 cut(s) 1497
Eco88I CYCGRG 1 cut(s) 1204
FaeI CATG 3 cut(s) 457, 502, 865
FalI AAGNNNNNCTT 4 cut(s) 7, 39, 830, 862
FaqI GGGAC 3 cut(s) 1019, 1249, 1324
FatI CATG 3 cut(s) 453, 498, 861
FauNDI CATATG 1 cut(s) 1315
Fnu4HI GCNGC 4 cut(s) 747, 789, 1350, 1455
FokI GGATG 1 cut(s) 629
Fsp4HI GCNGC 4 cut(s) 747, 789, 1350, 1455
FspBI CTAG 2 cut(s) 416, 509
GluI GCNGC 4 cut(s) 747, 789, 1350, 1455
GsaI CCCAGC 1 cut(s) 1349
GsuI CTGGAG 1 cut(s) 537
HaeIII GGCC 6 cut(s) 449, 711, 854, 1170, 1212, 1295
HapII CCGG 4 cut(s) 321, 911, 1308, 1419
HgaI GACGC 1 cut(s) 1016
Hin1II CATG 3 cut(s) 457, 502, 865
HincII GTYRAC 1 cut(s) 493
HindII GTYRAC 1 cut(s) 493
HinfI GANTC 9 cut(s) 171, 295, 317, 385, 404, 550, 735, 1015, 1338
HpaII CCGG 4 cut(s) 321, 911, 1308, 1419
HphI GGTGA 1 cut(s) 1423
Hpy166II GTNNAC 3 cut(s) 493, 506, 869
Hpy188III TCNNGA 5 cut(s) 321, 516, 929, 1204, 1277
Hpy8I GTNNAC 3 cut(s) 493, 506, 869
HpyAV CCTTC 3 cut(s) 460, 620, 926
HpyCH4III ACNGT 3 cut(s) 364, 1102, 1393
HpyCH4IV ACGT 1 cut(s) 1464
HpyF10VI GCNNNNNNNGC 5 cut(s) 389, 519, 626, 785, 797
HpyF3I CTNAG 6 cut(s) 14, 32, 159, 189, 1165, 1297
HpySE526I ACGT 1 cut(s) 1464
Hsp92II CATG 3 cut(s) 457, 502, 865
Kpn2I TCCGGA 1 cut(s) 320
Kzo9I GATC 7 cut(s) 104, 699, 925, 1022, 1066, 1085, 1273
LguI GCTCTTC 2 cut(s) 287, 837
LmnI GCTCC 2 cut(s) 1206, 1451
Lsp1109I GCAGC 4 cut(s) 758, 800, 1361, 1441
LweI GCATC 2 cut(s) 651, 788
MaeI CTAG 2 cut(s) 416, 509
MaeII ACGT 1 cut(s) 1464
MaeIII GTNAC 5 cut(s) 223, 394, 460, 1096, 1393
MalI GATC 7 cut(s) 106, 701, 927, 1024, 1068, 1087, 1275
MboI GATC 7 cut(s) 104, 699, 925, 1022, 1066, 1085, 1273
MfeI CAATTG 1 cut(s) 1079
MflI RGATCY 3 cut(s) 104, 925, 1273
MlsI TGGCCA 1 cut(s) 1212
MluCI AATT 5 cut(s) 339, 774, 1079, 1467, 1489
MluNI TGGCCA 1 cut(s) 1212
MlyI GAGTC 1 cut(s) 544
MmeI TCCRAC 2 cut(s) 80, 544
Mox20I TGGCCA 1 cut(s) 1212
MroI TCCGGA 1 cut(s) 320
MroXI GAANNNNTTC 1 cut(s) 831
MscI TGGCCA 1 cut(s) 1212
MseI TTAA 1 cut(s) 1516
MslI CAYNNNNRTG 1 cut(s) 458
Msp20I TGGCCA 1 cut(s) 1212
MspA1I CMGCKG 1 cut(s) 392
MspI CCGG 4 cut(s) 321, 911, 1308, 1419
MspR9I CCNGG 2 cut(s) 1309, 1419
MunI CAATTG 1 cut(s) 1079
Mva1269I GAATGC 3 cut(s) 435, 663, 1121
MwoI GCNNNNNNNGC 5 cut(s) 389, 519, 626, 785, 797
NciI CCSGG 2 cut(s) 1309, 1419
NdeI CATATG 1 cut(s) 1315
NdeII GATC 7 cut(s) 104, 699, 925, 1022, 1066, 1085, 1273
NlaIII CATG 3 cut(s) 457, 502, 865
NlaIV GGNNCC 2 cut(s) 909, 1275
NmeAIII GCCGAG 2 cut(s) 639, 969
NmuCI GTSAC 4 cut(s) 394, 460, 1096, 1393
PceI AGGCCT 3 cut(s) 711, 1170, 1295
PciSI GCTCTTC 2 cut(s) 287, 837
PctI GAATGC 3 cut(s) 435, 663, 1121
PdmI GAANNNNTTC 1 cut(s) 831
PfeI GAWTC 8 cut(s) 171, 295, 317, 385, 404, 735, 1015, 1338
PfoI TCCNGGA 1 cut(s) 1417
PkrI GCNGC 4 cut(s) 748, 790, 1351, 1456
PleI GAGTC 1 cut(s) 544
PpsI GAGTC 1 cut(s) 544
Ppu21I YACGTR 1 cut(s) 1465
PspFI CCCAGC 1 cut(s) 1345
PspN4I GGNNCC 2 cut(s) 909, 1275
PspPI GGNCC 3 cut(s) 80, 447, 1106
PstI CTGCAG 2 cut(s) 427, 1459
PsuI RGATCY 3 cut(s) 104, 925, 1273
PvuII CAGCTG 1 cut(s) 392
RsaI GTAC 2 cut(s) 870, 1373
RsaNI GTAC 2 cut(s) 869, 1372
RseI CAYNNNNRTG 1 cut(s) 458
Rsr2I CGGWCCG 1 cut(s) 1106
RsrII CGGWCCG 1 cut(s) 1106
SapI GCTCTTC 2 cut(s) 287, 837
SaqAI TTAA 1 cut(s) 1516
SatI GCNGC 4 cut(s) 747, 789, 1350, 1455
Sau3AI GATC 7 cut(s) 104, 699, 925, 1022, 1066, 1085, 1273
Sau96I GGNCC 3 cut(s) 80, 447, 1106
SchI GAGTC 1 cut(s) 544
ScrFI CCNGG 2 cut(s) 1309, 1419
SfaNI GCATC 2 cut(s) 651, 788
SfcI CTRYAG 2 cut(s) 423, 1455
SinI GGWCC 2 cut(s) 80, 1106
SmiMI CAYNNNNRTG 1 cut(s) 458
SmlI CTYRAG 1 cut(s) 836
SmoI CTYRAG 1 cut(s) 836
SnaBI TACGTA 1 cut(s) 1465
Sse9I AATT 5 cut(s) 339, 774, 1079, 1467, 1489
SseBI AGGCCT 3 cut(s) 711, 1170, 1295
SsiI CCGC 3 cut(s) 547, 957, 1253
SspMI CTAG 2 cut(s) 416, 509
StuI AGGCCT 3 cut(s) 711, 1170, 1295
StyD4I CCNGG 2 cut(s) 1307, 1417
TaaI ACNGT 3 cut(s) 364, 1102, 1393
TaiI ACGT 1 cut(s) 1467
TaqI TCGA 1 cut(s) 1065
TaqII GACCGA 2 cut(s) 621, 1094
TasI AATT 5 cut(s) 339, 774, 1079, 1467, 1489
TfiI GAWTC 8 cut(s) 171, 295, 317, 385, 404, 735, 1015, 1338
Tru1I TTAA 1 cut(s) 1516
Tru9I TTAA 1 cut(s) 1516
TscAI CASTG 5 cut(s) 340, 702, 827, 1105, 1398
TseFI GTSAC 4 cut(s) 394, 460, 1096, 1393
TseI GCWGC 4 cut(s) 746, 788, 1349, 1454
Tsp45I GTSAC 4 cut(s) 394, 460, 1096, 1393
TspDTI ATGAA 4 cut(s) 139, 219, 442, 727
TspGWI ACGGA 1 cut(s) 1098
TspRI CASTG 5 cut(s) 340, 702, 827, 1105, 1398
VpaK11BI GGWCC 2 cut(s) 80, 1106
XapI RAATTY 1 cut(s) 1489
XcmI CCANNNNNNNNNTGG 1 cut(s) 757
XmnI GAANNNNTTC 1 cut(s) 831
XspI CTAG 2 cut(s) 416, 509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.