Rmu_sc0002289.1_g000011

Tryptophan/tyrosine permease family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002289.1
Physical Location & Seq
Reverse (-)
55482 .. 67465
11984 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002289.1_g000011.1.cds

Sequence Viewer

Length: 1560 bp
atgcacaattccaaactcctcgccgatgccatggcgaaagtcggacgccttgccccagctcaaagatggtctcagcctcttcccaggtttgctactcaagctttgcttcatgataccttgaattttgaaaaggcaatggcatttctggcttctcctcctcctcctcctccttgttgttgtgttggttcttcaagattggtgcaaaagcaaattcacgctcttccactcgcactcgcacttgatcataaaccacttcatctcccaactccaaatccaagaaaattagcgaaatgcctgtcgcagaagaaacaatcggaagaggcggagttggaaaggctgttttccaacctcaaccaagccacattgaagagagaacccccaagtctatccagcgctgttttcctagttgcagggactaccgtgggtgctggtatcctcgcaatacctgcagtgacccaagaatctggatttctggcctctgcaataacctgcattttttgttgggcatacatggttgtaacaggtctgctagtagccgaagttaatgtaaatactatgtctcaactcggttctggcagtgtatcactggtatccatggctatgaggactgttggtaatgtgggagttcaaattgtttgttggacgtacatttttatacattacgcacttcttgttgcctatgttgctcgttcttcagaaattttgacaaattttgttggcattcccttatgggaaagtgcaacattgttttcattggttttcggaggcatttgctactttggaagtccgcggttcattggtgcggttaatggggttctggtaattggaatcatcatatcttttgctgctcttgaggcagttgcaagtgaatacctacaattgagtgcacttttgaaagccaacttccaagctgttcccatgagcataccgataattgttttgtcatttgtataccagaatgtagtgcctgttctttgtacagatcttgaaggagacctatcaaaagtaaggacttcgattgttctaggcacaagtataccacttattttatttctagtctggaatgctgtgattctaggaaccatcacagatgttgaaatgggctctggtaaaatcatggatccattacaactattgcaatcaacaaatgctgctgttggacctatagttgaggtgttctcaatttttgctatcgcgacgtcatatattggatttgttttgggtctttgtgatttcctttctgatctgctgaaactcccggctggtcagagcaggcctgtgttgccataccttttaacgttgattccaccagttgtgctgtcattgctagacccagatatattctttaaagccttggactttgctggaacttatggagtgttggtgctgtttggaatagttccagctgcaatgtcttggtccgatagatactcaagttcatccacagctgtgaaattgccgcagttggttccaggaggaaggctcaccctttcgcttgtggtaggaggtgctggatatatcatttcctcagaaattattgacaagttgagcaacccgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

519

Amino Acids

55.4

Weight (kDa)

7.52

Isoelectric Point (pI)

38.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1202
Acc36I ACCTGC 2 cut(s) 454, 497
AccI GTMKAC 2 cut(s) 951, 1036
AccII CGCG 2 cut(s) 790, 1196
AciI CCGC 5 cut(s) 323, 788, 790, 803, 1460
AclI AACGTT 1 cut(s) 1298
AclWI GGATC 2 cut(s) 1115, 1128
AcsI RAATTY 4 cut(s) 121, 210, 699, 709
AcuI CTGAAG 1 cut(s) 678
AcyI GRCGYC 2 cut(s) 46, 1199
AfaI GTAC 2 cut(s) 647, 979
AfeI AGCGCT 1 cut(s) 394
AgsI TTSAA 8 cut(s) 121, 128, 192, 367, 629, 895, 989, 1097
AjnI CCWGG 2 cut(s) 83, 1471
AleI CACNNNNGTG 1 cut(s) 1448
AluBI AGCT 5 cut(s) 59, 101, 911, 1406, 1448
AluI AGCT 5 cut(s) 59, 101, 911, 1406, 1448
Alw21I GWGCWC 1 cut(s) 889
Alw26I GTCTC 3 cut(s) 75, 564, 987
Alw44I GTGCAC 1 cut(s) 885
AlwI GGATC 2 cut(s) 1115, 1128
Aor51HI AGCGCT 1 cut(s) 394
AoxI GGCC 2 cut(s) 474, 1274
ApaLI GTGCAC 1 cut(s) 885
ApeKI GCWGC 3 cut(s) 845, 1151, 1406
ApoI RAATTY 4 cut(s) 121, 210, 699, 709
ArsI GACNNNNNNTTYG 2 cut(s) 281, 313
AspLEI GCGC 1 cut(s) 395
AspS9I GGNCC 2 cut(s) 1160, 1419
AsuC2I CCSGG 1 cut(s) 1259
AsuHPI GGTGA 1 cut(s) 1477
AvaII GGWCC 2 cut(s) 1160, 1419
BaeGI GKGCMC 1 cut(s) 889
BaeI ACNNNNGTAYC 2 cut(s) 1420, 1453
BamHI GGATCC 1 cut(s) 1120
BanII GRGCYC 1 cut(s) 1106
Bbv12I GWGCWC 1 cut(s) 889
BbvI GCAGC 3 cut(s) 832, 1138, 1393
BccI CCATC 2 cut(s) 60, 1091
BciT130I CCWGG 2 cut(s) 85, 1473
BciVI GTATCC 2 cut(s) 443, 601
BclI TGATCA 1 cut(s) 241
BcnI CCSGG 1 cut(s) 1259
BcoDI GTCTC 3 cut(s) 75, 564, 987
BfaI CTAG 6 cut(s) 404, 530, 1025, 1055, 1076, 1328
BfmI CTRYAG 2 cut(s) 447, 1164
BfoI RGCGCY 1 cut(s) 396
BfuAI ACCTGC 2 cut(s) 454, 497
BfuI GTATCC 2 cut(s) 443, 601
BglII AGATCT 1 cut(s) 982
BisI GCNGC 4 cut(s) 846, 1152, 1407, 1460
BlsI GCNGC 4 cut(s) 847, 1153, 1408, 1461
Bme1390I CCNGG 3 cut(s) 85, 1259, 1473
Bme18I GGWCC 2 cut(s) 1160, 1419
BmgT120I GGNCC 2 cut(s) 1160, 1419
BmiI GGNNCC 3 cut(s) 1081, 1122, 1470
BmrFI CCNGG 3 cut(s) 85, 1259, 1473
BmsI GCATC 1 cut(s) 16
BplI GAGNNNNNCTC 4 cut(s) 1163, 1195, 1467, 1499
BpuEI CTTGAG 3 cut(s) 81, 872, 1417
BpuMI CCSGG 1 cut(s) 1259
BsaHI GRCGYC 2 cut(s) 46, 1199
BsaI GGTCTC 2 cut(s) 75, 987
BsaJI CCNNGG 6 cut(s) 30, 83, 420, 594, 788, 1353
BsaXI ACNNNNNCTCC 4 cut(s) 243, 273, 1368, 1398
Bse1I ACTGG 2 cut(s) 591, 1310
Bse3DI GCAATG 3 cut(s) 141, 1322, 1416
BseBI CCWGG 2 cut(s) 85, 1473
BseDI CCNNGG 6 cut(s) 30, 83, 420, 594, 788, 1353
BseGI GGATG 1 cut(s) 1439
BseMI GCAATG 3 cut(s) 141, 1322, 1416
BseMII CTCAG 2 cut(s) 86, 1542
BseNI ACTGG 2 cut(s) 591, 1310
BseRI GAGGAG 6 cut(s) 8, 144, 147, 150, 153, 156
BseSI GKGCMC 1 cut(s) 889
BseXI GCAGC 3 cut(s) 832, 1138, 1393
BseYI CCCAGC 1 cut(s) 55
Bsh1236I CGCG 2 cut(s) 790, 1196
BshFI GGCC 2 cut(s) 476, 1276
BsiHKAI GWGCWC 1 cut(s) 889
BsiSI CCGG 1 cut(s) 1259
BslFI GGGAC 1 cut(s) 427
BsmAI GTCTC 3 cut(s) 75, 564, 987
BsmFI GGGAC 1 cut(s) 427
BsmI GAATGC 2 cut(s) 720, 1069
BsnI GGCC 2 cut(s) 476, 1276
Bso31I GGTCTC 2 cut(s) 75, 987
Bsp1286I GDGCHC 2 cut(s) 889, 1106
Bsp1407I TGTACA 1 cut(s) 977
Bsp143I GATC 4 cut(s) 241, 982, 1120, 1243
Bsp19I CCATGG 2 cut(s) 30, 594
Bsp68I TCGCGA 1 cut(s) 1196
BspACI CCGC 5 cut(s) 323, 788, 790, 803, 1460
BspANI GGCC 2 cut(s) 476, 1276
BspCNI CTCAG 2 cut(s) 85, 1541
BspFNI CGCG 2 cut(s) 790, 1196
BspHI TCATGA 1 cut(s) 109
BspLI GGNNCC 3 cut(s) 1081, 1122, 1470
BspMAI CTGCAG 1 cut(s) 451
BspMI ACCTGC 2 cut(s) 454, 497
BspPI GGATC 2 cut(s) 1115, 1128
BspQI GCTCTTC 1 cut(s) 225
BspTNI GGTCTC 2 cut(s) 75, 987
BsrDI GCAATG 3 cut(s) 141, 1322, 1416
BsrGI TGTACA 1 cut(s) 977
BsrI ACTGG 2 cut(s) 591, 1310
BssECI CCNNGG 6 cut(s) 30, 83, 420, 594, 788, 1353
BssMI GATC 4 cut(s) 241, 982, 1120, 1243
BssNAI GTATAC 2 cut(s) 952, 1037
BssNI GRCGYC 2 cut(s) 46, 1199
BssT1I CCWWGG 3 cut(s) 30, 594, 1353
Bst1107I GTATAC 2 cut(s) 952, 1037
Bst2UI CCWGG 2 cut(s) 85, 1473
Bst4CI ACNGT 2 cut(s) 421, 610
Bst6I CTCTTC 4 cut(s) 84, 225, 312, 362
BstACI GRCGYC 2 cut(s) 46, 1199
BstAPI GCANNNNNTGC 1 cut(s) 446
BstAUI TGTACA 1 cut(s) 977
BstC8I GCNNGC 1 cut(s) 1274
BstDEI CTNAG 2 cut(s) 72, 1528
BstDSI CCRYGG 4 cut(s) 30, 420, 594, 788
BstF5I GGATG 1 cut(s) 1439
BstFNI CGCG 2 cut(s) 790, 1196
BstH2I RGCGCY 1 cut(s) 396
BstHHI GCGC 1 cut(s) 395
BstKTI GATC 4 cut(s) 244, 985, 1123, 1246
BstMAI GTCTC 3 cut(s) 75, 564, 987
BstMBI GATC 4 cut(s) 241, 982, 1120, 1243
BstMWI GCNNNNNNNGC 7 cut(s) 98, 146, 446, 683, 854, 1282, 1324
BstNI CCWGG 2 cut(s) 85, 1473
BstSCI CCNGG 3 cut(s) 83, 1257, 1471
BstSFI CTRYAG 2 cut(s) 447, 1164
BstSLI GKGCMC 1 cut(s) 889
BstUI CGCG 2 cut(s) 790, 1196
BstV1I GCAGC 3 cut(s) 832, 1138, 1393
BstX2I RGATCY 2 cut(s) 982, 1120
BstXI CCANNNNNNTGG 1 cut(s) 464
BstYI RGATCY 2 cut(s) 982, 1120
BstZ17I GTATAC 2 cut(s) 952, 1037
BsuI GTATCC 2 cut(s) 443, 601
BsuRI GGCC 2 cut(s) 476, 1276
BtgI CCRYGG 4 cut(s) 30, 420, 594, 788
BtsCI GGATG 1 cut(s) 1439
BtsI GCAGTG 2 cut(s) 456, 583
BtsIMutI CAGTG 3 cut(s) 456, 583, 584
BtuMI TCGCGA 1 cut(s) 1196
BveI ACCTGC 2 cut(s) 454, 497
Cac8I GCNNGC 1 cut(s) 1274
CciI TCATGA 1 cut(s) 109
CfoI GCGC 1 cut(s) 395
Cfr13I GGNCC 2 cut(s) 1160, 1419
Cfr42I CCGCGG 1 cut(s) 791
CseI GACGC 1 cut(s) 54
Csp6I GTAC 2 cut(s) 646, 978
CviAII CATG 6 cut(s) 31, 110, 511, 595, 919, 1117
CviQI GTAC 2 cut(s) 646, 978
DdeI CTNAG 2 cut(s) 72, 1528
DpnI GATC 4 cut(s) 243, 984, 1122, 1245
DpnII GATC 4 cut(s) 241, 982, 1120, 1243
DraI TTTAAA 1 cut(s) 1348
Eam1104I CTCTTC 4 cut(s) 84, 225, 312, 362
EarI CTCTTC 4 cut(s) 84, 225, 312, 362
EciI GGCGGA 1 cut(s) 338
Eco130I CCWWGG 3 cut(s) 30, 594, 1353
Eco147I AGGCCT 1 cut(s) 1276
Eco24I GRGCYC 1 cut(s) 1106
Eco31I GGTCTC 2 cut(s) 75, 987
Eco47I GGWCC 2 cut(s) 1160, 1419
Eco47III AGCGCT 1 cut(s) 394
Eco57I CTGAAG 1 cut(s) 678
EcoRII CCWGG 2 cut(s) 83, 1471
EcoT14I CCWWGG 3 cut(s) 30, 594, 1353
EcoT38I GRGCYC 1 cut(s) 1106
ErhI CCWWGG 3 cut(s) 30, 594, 1353
FaeI CATG 6 cut(s) 34, 113, 514, 598, 922, 1120
FalI AAGNNNNNCTT 2 cut(s) 90, 122
FaqI GGGAC 1 cut(s) 427
FatI CATG 6 cut(s) 30, 109, 510, 594, 918, 1116
FbaI TGATCA 1 cut(s) 241
FblI GTMKAC 2 cut(s) 951, 1036
Fnu4HI GCNGC 4 cut(s) 846, 1152, 1407, 1460
FokI GGATG 1 cut(s) 1426
FriOI GRGCYC 1 cut(s) 1106
Fsp4HI GCNGC 4 cut(s) 846, 1152, 1407, 1460
FspBI CTAG 6 cut(s) 404, 530, 1025, 1055, 1076, 1328
GlaI GCGC 1 cut(s) 394
GluI GCNGC 4 cut(s) 846, 1152, 1407, 1460
GsaI CCCAGC 1 cut(s) 59
HaeII RGCGCY 1 cut(s) 396
HaeIII GGCC 2 cut(s) 476, 1276
HapII CCGG 1 cut(s) 1259
HgaI GACGC 1 cut(s) 54
HhaI GCGC 1 cut(s) 395
Hin1I GRCGYC 2 cut(s) 46, 1199
Hin1II CATG 6 cut(s) 34, 113, 514, 598, 922, 1120
Hin6I GCGC 1 cut(s) 393
HinP1I GCGC 1 cut(s) 393
HindIII AAGCTT 1 cut(s) 99
HinfI GANTC 4 cut(s) 461, 828, 1072, 1303
HpaII CCGG 1 cut(s) 1259
HphI GGTGA 1 cut(s) 1477
Hpy166II GTNNAC 3 cut(s) 887, 952, 1037
Hpy188I TCNGA 8 cut(s) 44, 316, 697, 764, 1243, 1269, 1423, 1531
Hpy188III TCNNGA 7 cut(s) 110, 192, 465, 851, 986, 1060, 1195
Hpy8I GTNNAC 3 cut(s) 887, 952, 1037
Hpy99I CGWCG 1 cut(s) 1201
HpyAV CCTTC 2 cut(s) 983, 1473
HpyCH4III ACNGT 2 cut(s) 421, 610
HpyCH4IV ACGT 3 cut(s) 644, 1199, 1298
HpyF10VI GCNNNNNNNGC 7 cut(s) 98, 146, 446, 683, 854, 1282, 1324
HpyF3I CTNAG 2 cut(s) 72, 1528
HpySE526I ACGT 3 cut(s) 644, 1199, 1298
Hsp92I GRCGYC 2 cut(s) 46, 1199
Hsp92II CATG 6 cut(s) 34, 113, 514, 598, 922, 1120
HspAI GCGC 1 cut(s) 393
Ksp22I TGATCA 1 cut(s) 241
KspI CCGCGG 1 cut(s) 791
Kzo9I GATC 4 cut(s) 241, 982, 1120, 1243
LguI GCTCTTC 1 cut(s) 225
Lsp1109I GCAGC 3 cut(s) 832, 1138, 1393
LweI GCATC 1 cut(s) 16
MaeI CTAG 6 cut(s) 404, 530, 1025, 1055, 1076, 1328
MaeII ACGT 3 cut(s) 644, 1199, 1298
MaeIII GTNAC 2 cut(s) 451, 517
MalI GATC 4 cut(s) 243, 984, 1122, 1245
MboI GATC 4 cut(s) 241, 982, 1120, 1243
MboII GAAGA 7 cut(s) 71, 180, 212, 316, 329, 379, 684
MfeI CAATTG 1 cut(s) 878
MflI RGATCY 2 cut(s) 982, 1120
MhlI GDGCHC 2 cut(s) 889, 1106
MmeI TCCRAC 5 cut(s) 22, 309, 369, 620, 1138
MseI TTAA 4 cut(s) 543, 807, 1295, 1347
MslI CAYNNNNRTG 2 cut(s) 599, 1448
MspA1I CMGCKG 3 cut(s) 790, 1406, 1448
MspI CCGG 1 cut(s) 1259
MspR9I CCNGG 3 cut(s) 85, 1259, 1473
MunI CAATTG 1 cut(s) 878
Mva1269I GAATGC 2 cut(s) 720, 1069
MvaI CCWGG 2 cut(s) 85, 1473
MvnI CGCG 2 cut(s) 790, 1196
MwoI GCNNNNNNNGC 7 cut(s) 98, 146, 446, 683, 854, 1282, 1324
NciI CCSGG 1 cut(s) 1259
NcoI CCATGG 2 cut(s) 30, 594
NdeII GATC 4 cut(s) 241, 982, 1120, 1243
NlaIII CATG 6 cut(s) 34, 113, 514, 598, 922, 1120
NlaIV GGNNCC 3 cut(s) 1081, 1122, 1470
NmuCI GTSAC 1 cut(s) 451
NruI TCGCGA 1 cut(s) 1196
OliI CACNNNNGTG 1 cut(s) 1448
PagI TCATGA 1 cut(s) 109
PceI AGGCCT 1 cut(s) 1276
PciSI GCTCTTC 1 cut(s) 225
PctI GAATGC 2 cut(s) 720, 1069
PfeI GAWTC 4 cut(s) 461, 828, 1072, 1303
PfoI TCCNGGA 1 cut(s) 1471
PkrI GCNGC 4 cut(s) 847, 1153, 1408, 1461
Psp1406I AACGTT 1 cut(s) 1298
Psp6I CCWGG 2 cut(s) 83, 1471
PspFI CCCAGC 1 cut(s) 55
PspGI CCWGG 2 cut(s) 83, 1471
PspN4I GGNNCC 3 cut(s) 1081, 1122, 1470
PspPI GGNCC 2 cut(s) 1160, 1419
PsrI GAACNNNNNNTAC 2 cut(s) 954, 986
PstI CTGCAG 1 cut(s) 451
PsuI RGATCY 2 cut(s) 982, 1120
PvuII CAGCTG 2 cut(s) 1406, 1448
RruI TCGCGA 1 cut(s) 1196
RsaI GTAC 2 cut(s) 647, 979
RsaNI GTAC 2 cut(s) 646, 978
RseI CAYNNNNRTG 2 cut(s) 599, 1448
SacII CCGCGG 1 cut(s) 791
SapI GCTCTTC 1 cut(s) 225
SaqAI TTAA 4 cut(s) 543, 807, 1295, 1347
SatI GCNGC 4 cut(s) 846, 1152, 1407, 1460
Sau3AI GATC 4 cut(s) 241, 982, 1120, 1243
Sau96I GGNCC 2 cut(s) 1160, 1419
ScrFI CCNGG 3 cut(s) 85, 1259, 1473
SduI GDGCHC 2 cut(s) 889, 1106
SfaNI GCATC 1 cut(s) 16
SfcI CTRYAG 2 cut(s) 447, 1164
Sfr303I CCGCGG 1 cut(s) 791
SgrBI CCGCGG 1 cut(s) 791
SinI GGWCC 2 cut(s) 1160, 1419
SmiMI CAYNNNNRTG 2 cut(s) 599, 1448
SmlI CTYRAG 3 cut(s) 96, 851, 1432
SmoI CTYRAG 3 cut(s) 96, 851, 1432
SseBI AGGCCT 1 cut(s) 1276
SsiI CCGC 5 cut(s) 323, 788, 790, 803, 1460
SspMI CTAG 6 cut(s) 404, 530, 1025, 1055, 1076, 1328
StuI AGGCCT 1 cut(s) 1276
StyD4I CCNGG 3 cut(s) 83, 1257, 1471
StyI CCWWGG 3 cut(s) 30, 594, 1353
TaaI ACNGT 2 cut(s) 421, 610
TaiI ACGT 3 cut(s) 647, 1202, 1301
TaqI TCGA 1 cut(s) 1016
TatI WGTACW 1 cut(s) 977
TauI GCSGC 1 cut(s) 1462
TfiI GAWTC 4 cut(s) 461, 828, 1072, 1303
Tru1I TTAA 4 cut(s) 543, 807, 1295, 1347
Tru9I TTAA 4 cut(s) 543, 807, 1295, 1347
TscAI CASTG 3 cut(s) 456, 583, 591
TseFI GTSAC 1 cut(s) 451
TseI GCWGC 3 cut(s) 845, 1151, 1406
Tsp45I GTSAC 1 cut(s) 451
TspDTI ATGAA 5 cut(s) 98, 245, 741, 784, 1428
TspRI CASTG 3 cut(s) 456, 583, 591
VneI GTGCAC 1 cut(s) 885
VpaK11BI GGWCC 2 cut(s) 1160, 1419
XapI RAATTY 4 cut(s) 121, 210, 699, 709
XcmI CCANNNNNNNNNTGG 1 cut(s) 63
XmiI GTMKAC 2 cut(s) 951, 1036
XspI CTAG 6 cut(s) 404, 530, 1025, 1055, 1076, 1328
ZraI GACGTC 1 cut(s) 1200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.