AT5G24740

Vacuolar-sorting-associated 13 protein C-terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0001657
Physical Location & Seq
Reverse (-)
8469711 .. 8489867
20157 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G24740.3

Sequence Viewer

Length: 10395 bp
ATGCTTGAAGGATATGTGCAAGGATTTGTGAACCTGTTGTTAGGGTACTTAGGTCGTTACATTAAAGACATCCAGAAAGACCAGCTCAAGATCTCACTCTGGAATGGAGAAGTCTTATTGGAGAACGTGGAATTGAATCCTGAGGCGTTTGAGTATTTGCAGCTTCCAATTGCTCTCAAGCAAGGCCGTGTTGGGAAATTGAGCATTAAAATTCCATGGAAGAAACTTCATAGGGATCCTGTAACCATTATGATTGAAGATGTCTTTATATGTGCATCGCAACGCAATGATCAAGAGTGGAGTTCAGATGTCGTTGAGAAAAGAGAGTTTGCTGGTAAGAAAGCTAAACTTGCTTCTGCAGAACTGGCAAAATTGTCCAGGCGTGTCTTCGACAATCCAGGCGGAAATTCTTATATGTCATATATTACTGCCAAGATTCTTGATAGCGTTCAAGTGTCCATCAAAAATTTTCACATCTTATACTCAGATGCACAACCTGAATCGGGGCAAGTTGTATTAGGATTGCGGTTTTCAAGCTTGACAGTTACTAAACAAAACTCAGTTGGGCCATCAGTTGGTAGGGTGAGAGGGGGGCAAGTGAATATACTTGTGGAGGTTGAAGGTTTGGAAATATATTGTGACATGTATGAGGGAAACATGGACTTTCCAAGTGTTAATGAAAAAATAGGTTTTGACAATTGGTGCCAGTCAAGATTGCAAAGCAATAGATTTGGTTATTTACTGAAGCCAGTCCATGTTTCTGTAACGCTATTGGTCAATCGATCTGGAGAGCTTTATGACGATCTTCCTCAGTATTCTATCAGCGCTGAGTTGACTGATGTGGTGGTGACTCTGAATGAATTTCAATTGCAGCAGATTCTTATTCTGTTAGATTATTTGCAAACCAGCCAGTTGCGTGAGAGGTATGGGCGGTATCGTCCCTGCTCCACTTCTTTATCGAGGAAACCACCTGGATGGCAGAAACTTTGGTGGCACTATGCCCAAAATTCAGTTTTATCTGATTCAATCGATAAGTCCATCCGTTTGGGTTTGGAAGAATTGGAGAAGAAGTCTGATATTGATGATATCTTAAGTTATAGGTCTGCAGCGGAAGGTGAGATGCAGGAAGCTTGCTCAGAATTGACAGTAAACATGGGAGCGACTGGTGCCACTAGATCCGAAAAGGAACAGAGTGCCCCTGAAAAGGAACCGAGTGACGATCCTACATTAAATAAGTCGCGTGGGTGGTTGAACTGGTTGTCACGGGGAATGCTTGGTGCCGGAGGCACAGAGGATTCAAGTCAGTTTTCTGGTGTTGTTTCTGATGAAGTTGTCAAGGATATACACAAGGCAACAAAGTTTTACCCTCTTTCTTCATCTCCTAGAAATACAAGTGCAACTGGTAAGATCTGTACGTGCTCCATTCGACTCAACGTACGCAAATTTTCTGCTACTTTGCAACATATAAGTGGAAGTTCTTCTCAAGTTATTACAGAGTTGGACATTTTGGGGGTGATTGTTGAATGCAAGTCTTGGAAAGATTCTACAGCCATGATTTTATCTGTTATTTCTGGAAGGCTGGTCTATCCTCACAATGGGAAAGAAATTTTAACCATGAAAAGGGTCTGTTCTCAGAGTGATACACTAGAAACGAAACCCTCATATGGAGCGCGGTTGGAGTTGTCTAAAGATCATGATGTTGCATTGTCATTAAAGGCCACCCTTCAACCACTTGAAGCCGCTTATGATGGAGGCTTCATTCTAGCTGTCAGTAATTTTTTCTCGGGTTCAAGATACTTCAAACTCCAACATGAAAGGATTTTATCATCACTCAATGGCCTTGAAAGTGAAACGCGATTGGCAGCGAAAGCTGAATACCTCTTATCAAGCCGAAATAAAGTTAAGTGGGATCTGGACATAAAAGATCTTACCTTAAGTTTCCCTGGACGATTGGTTGAATCAGAAAGCTATAATCTGGTTCTGGTATTGGAATCTCTTTCTATCACATCTAGTAGCACAGATGCTCTTAGCCAAATTCCAAGATTGCAGTCTGATGTGGACCATGTGGTCAATAGCTTACAAAGTTCCGTTGAAGCTTTGGATGCTTTTCAAGTCAAAGATCTCTACGACCATTTTGATATCAAAATCTGTAACCTTGAGATGAAGCTCATGAAGATTCATCCTTTCCAAGAACTTCCCCTTGTGGAGAAATCATCTTTACTTATCAAGTTTGCGTCTTGTATAATTCCGGAGGAGTCGATTTTGAAGCAGTTGGAGGTTGAAGCTACTCTGCCTATGTTCAATGTCCATTTCTCTCCGTCAATATTTAAAGGAGTCATGTCTGTGATTGAATATCTTGATATTCAGGATCATGGAACTCGAAATCCTCCACCTTCCCCTGCTCCCATCTTTCACTTCACCATCAAAACCGACTTGGCATTTTTAAGGTTGCACGTCAATCTCGAAAATAAAGGAGAAAATAGCACAGTGCTTGTTCTTTCTATACAGCAGCTTGATCTCTGGTATTCACGTGCTATATTTGAAGAGTGGTCAGTCCGTGCGAAAACATTGGAAATAACAGCTTGCTCCTCTAAAGATGCAGCTGACAGTCATATTTTATGTTCATCTGGAAATCTACTCAAATCGTCTTCCCATGGACATGGGATGGATGCTCATACTAGCGATGAAACCAACATTATTGACTACAGAACAACTCCTGAAGCTGCTATCAGCTTAAATTGCAAGGTTTCTCAAAGTAAAAGTTTTATTTTTCACAAGTATACAGTCTATTGGAGGAGCGCCGAGCTCCATTGCTACCCATACATATTTGGTTTGCTGACAAATTTTTTGGATAAGATAGCTTCCTATAAGATCTCGTCTAGCTATACAAATCCATCTAGCCTTGCTACAGATACCATTGCTCCAACAGAAATACCTCAGTTTGATTTTGAAAGGTTTGGATTCTCAAACTTCACTGAAAGTAGATCTTGTGGCTGCATTCCTCTTGACAAATTTCCATTTGTAACCATTAACAATTCGGGTTCTCTTCATAGCCTAGAAAGTTCTCTGTGTTATTCGACTTCTGACTGGAGGAAGTTATTTATATTAAAGAATAGAAAGGATGGGGCACAAATAGGTTTGAACTGCGAATGTAACAGCTGTACTTTTCAACTTAAACGTGATTGCCCTCTGAATGGGCTTGCGTCCTCCAGGGATCTTGGTCAGACCAATCACTTTACAGTTGATATGCATGTCTTCAACACCAATGTACATTTTCATGATTCTTCAAGTGTTTTTGGAACTATTATACTGCCAGTATCCAGATACTTTCTTAACATTTCAGATGATCTTCTCGATTTGGTTGCCTCTGCTGAAGACTTGATGCTGGTGTCATCTTTGTTCACCAACTATTCTGGCGGGTTTCTTTGGAAACAATCATCAACAGATGTCTCACAGGTCTTGAACCTACGTGTAAGGAAGAGGGGTTTGGAGCCTTCTGGTTCTCAACTTGAAGTGAGCATAGGTATTCAACACACATACTGCATTTTACCGCCGGAATATCTAGCCATTATAATTGGCTATTTCTCTCTTTCTGACTGGACTTCAAAGTCTGGCCTGCAGTCATTGCCACAAGCTACTGAGTTGACCAAGGCTCATTCTGAGTTTGCCATTAGTTATAAAATTGAGATACTGGACTCCTCTATTGTTCTTCCTGTGGAAGGTGATGACCGCCGGCAACTGAAAGTTGACATTCAGCAGTTATATATTAGCTTTATTCCAGAGTGTGCGTTGAGCAATGTGGTGCAGCACATACCACAGGAATGTGTTATTCCACTTAATCAAGTACTAGGGCGAGCCGACTGTTTAAACATATTTGGGCGGGACTTATCAGTATCATTGCTGCTTTCTGAGAGTGACATATCAACATTCAAGAAGAACGCCGTGTGCAGAAGTATCACTCTGGCTGCTAGCATTATTGCTGATACTTGGATTAGATTCCCTTGTGATCACAATCCGTTAACGGAATTGGCATGTGTTATGTCAAGGGTTGACGTTTGTGAAATTGTTGTCGATGATTCAGATGCCTTGGATGGGTTTAAGGCATTTCTTGATGTGGTTGATCAGCTTTCTTTAGTCGATGAGGAATCAAAACTTTTCGTGTCTGATGTTCCTCAGTTTCTTCATACGAAGATGCGCCTAAAGCAAGAGTTGTCAGTTGCACCCCTGGAACCTTCCACAAGCTTTATAAAATTCAGAATTTTTGTCAATCTTTTGACGTCAAAACTGCATCGGTTAAGGAAAGCTCCTGGAACACTGCTATCCGAACCAGTGCTCCAAGCTGATATGAAATTTGTTTGCTCTGGAGAACTTAAAAATAATTTCCCTATGAGCTTGGATGTTCAGTTTTTCAAAATCGGGCTTTATTCATTACTGAGCTCAGTCATGTTAGCTAGATGCATCAATGCAGATGGGGATCCTTCTGCACTGAGAGTCAGATTTACGGAGCAGGCTGAAAATGAATACGATCTCTGTTTTTCTCTTCCATCCCTAGACATCTGGTTACACTTTTTTGATTGGATTGAAGTTATTGAACTTCTGAAATCTTATTCCCAGAAACTGGAAGACAGTAGTGAAGACCGTTTTTTCTCAAAAGGTTCAAAATTGGATATGGATGAATCTATTGGAGTGGTAAGGACTATTTGTGACAATACTGATCGGGTTTTGAATGTTCTGCAAACTGAGGTATCAGAGAACTCTAGTGAGGTAATGTCATTTGCCGCAAGATCAGAGAATATTGGTGTCAAAATCCATATTCCTCTTTGCACAAGCCATACAGAATTTCCAGGGTTCATGGCAACTGATGTTCATGAGATATCTGAGGAAGAGCACACAAATTGTTTTAAAGGGAATTACTGTAAATATGTTTCTGTTACAGCGTGTAGTAGAAGTGGCGAACTCTCTATTCTTGGGAGAGATGTCAAACTGAGCTATAAGATTGAAAAGCTCAATGGGATTCTTGCAATATCTGGGGTTGACACTGTCAGGTCTTGCTCTCTATTTGGGGCGGCACAACTACTTGTAGAAACTAGTATTCAGATGGATCAGAACAAAATCATGAGCATAGATGTGGGGATACTGTCTGACAAAGTAGAGATGCATGCATCTCATCAAGTATTATCTTTTTGGCATGGAATTACGTTTGATGCACCTGAGACACCATCTTCACAAAATTCGGAAGGAAACATGAGCATAAAAGTCCAGATAAGAGATGTGTCTCTTCTTATATCAGATGGAAAGTGGGGATGTAGCGGTATGCTTCTTGAAGTTCTTATGAGAAACTTTCTCCTGCAAGCTAATCTGGCCGAAAAAAATATGGAGAGTTTGGTTTCATGTGATCTTGAAGTGAATTATAATAATATGCACAAGGTCTTGTGGGAGCCTTTTATTGAGCCCTGGAATTTTGATATCAAATTATCCCGAAAATTTGATGCAAATTCTTTGCTGAACAATGCTGGGCTCACTGAAGTAATTGTTGCATCATCAAATCAGCTCAATTTGAACTTAACAGAATCTCTTTTTGAGTGCATTTTCAGGATAATTGAGATGTTGAACATTTTGGAATTGATGGAAACAGATGCCATTCCTGATAATAAGGGATTGTCAGTTTACTGCACCAACAGTACCAGGACAGAACGATATTCCCCATATGTACTTCAAAATTTAACTTCTCTTCCGTTGGGGTACCAAGTTTTCCAAGGACATGATTCAGATGTGCTAAATATATCAGCTCCAGTGGCTCAGAACTTTGTGCAACCCGGTTGCTCTGTTCCCATTTATATCGATAATAGTGACACACTACTTATTCCTGATAGACGTCGAAGTCAATTTGGTTGTTCCAGCAGTGAATCTGGTGATGCCATACATCATTATATGAAGGTCCAACTTGATGGAACATCTTTTGCTTCTCCTCCTCATTCAATGGATCGAATTGGCCTTTCCTATTTTGAGGTTGATTTTTCCAAAACATCAAACTCCAGTGATAATGTTGAGAAAGCAAGTAAATCTGGTTATGGAAGCAGCTTTGTTGTTCCTGTTGTGTACGAGGTTTCATTGCAGCAGCAGAGCAAGTTGATACGAGTATACTCTACTGTTATAATTTTGAACTCCACATCCATGCCATTGGAACTTCGCTTTGATATTCCGTTTGGCATCTCCCCAAAGTTGCCTTACCTGGTTGATCTTAACACCATCTTTTATTATTCTTATGCCATTCTATTTCAGATCCTAGATCCTATTTTTCCTGGTCAAGAATTTCCACTGCCTCTACACTTGGCTAAATCTGGCCGGCTACGGTGGCGTCCCCTCGGAGATTCTTATTTGTGGAGTGAAGCTCATAGCATCTCCAAAGTTCTTTCTCAAGATAGCGGGATAGGATTTCGCCGATCTTTTGCTTGTTATCCATGTCACCCTAGCCATGAACCATTTCGGTGTTGCATATCTGTTCAGAGCACCAGCTTGCCGGCATCGTTTCATATTAATGATTTGTCAGCTGGAAATTTTGGTCAGCAGTTGCACAATCTTGACCAATCAAGAGAGCAATTCATTCATCAAGTAACTTTAAGCACTCCATTTGTTGTGAGCAACTGTCTTCCAGATCCAATATCACTTTCTATCGAAAGTGGTGGCATCACTCAAACTGCATCCCTTCCTGAGACGCCATTCCATCATATTGATCCTTCACATGACCTGGTCCTTGAGTTCAAATTAAATGGCTGTAGAACATCATCTTTAAAGTTTTCACGCTCAGAAACTTTTAGCACAGAGGCTAAGTTCAGTGGAGGGAAGTTCTCTCAGATTGAAACTATTTCCTTTGATTCACACGTTGGTGGTGGTTCTGTTTATGTATCGTGTGAGAAAACAATGGATGCAACATGTGGGGCTCGGGAAGTATTAATCTTTGTCCCATTTTTACTGTATAACTGCACTGGAACTCCTCTGATTGTTTCGGACTGCACCAATGAAACTAAAGGGATTTACAGCGTAATACCGTCTTGCTACAACCTGATTGAGCAGCATTTTGTTCAAAGTCGAAAAGTTGGTCTTGGCATTTTGACCTCTGAGAAAGATTTGCTAGATAAAGCTGTAATGGAGGACATTCCTTGTAGTCCTTCCTCATCGGAGTGCAGCAACACTGCTTCCAGTACTGAGAGATTTATAGATAAGCATGCGACTCAGTCAACTCGCCAAGTCCCTTTTGCAGCATATCCAAAAGACTCAGCAATTGTTCGCAAGAGGAGCCTTTCTTCAAAAAGTTTAAGAGAGGTGTGCTTCCAAGGTAATGATGAGTCTGGCAAAGTAAAGGCATGCATTTATTCACCTTGCCCTATTTCCAGAGTCAGTGACACCATGATCCGAGTCAAAAGGGACCTGCCAGGGTGGGTTAATTCAAGTAGCCCATACCCTCTGTGGTCTGCTCCATTTCCTCTCGTTCCACCCAGTGGTTCTACAAATGTAGTTGTCCCACAACCATCGCCTGGTGAATCATCTTTATTATCTGTTACATGTTCTATTCTTGGTGGTGCATTAGCAGGGAGAACGCAAGCAATTACTTTCCAACCTAGATATATCATCTGTAATTCATGCAGCCATAACCTGTGTTACAAGCAGAAGGGAACCAATTTAGTTTCTCATCTGGCTGTTGGACAGCATTCTCAGCTTCAATGGACAGATACTACTAGGGAGCTGCTAGTTTCAATCCGTTTAAATGAGCCTGGATGGCAATGGTCAGGCAGCTTCTTGCCAGATCATTTAGGGGATACGCAACTGAAGATTTGGAACTATGTTAACAAAGCTTTCAACATGGTGCGGGTGGAAGTTCAGAATGCCAATATGTCAAGCGGAGATGAAAAGATTGTAGGGAGTGTTCATGGACATGTCGGGACAAACTTTATTCTATTATCAGATGACGACATGGGCTATATGCCTTACAGGATTGATAATTTCTCAAATGAGAGACTTAGGGTTTATCAACAAAAATGTGAAACTTTTGATACCATAGTTCATCCTTACACATCTTGCCCTTATGCTTGGGATGAACCCTGTTATCCACATCGTTTGACCATTGAGGTACCCGGAGATCGTGTTCTAGGCTCTTATGCATTTGAGATAACAAAACAACCTATTGCAGTGCACTTGCGCTCCACCTCTGAGAAACCTGAAAGGACATTGTTGCTATCTATCTGTGCTGAAGGAGCTACAAAGGTTTTCAGTGTTGTAGATTCAGGTTATCACGCCATAAAAGATATAAAGGAAACATTTGACTCCAGATTCCATGAGAAGGGAAAGAAAAAGCTTCAAACTGACAATATCATCCGTTACACAGAAACGTTCTTGCTTGTCCTGCCAAGCATTGGTATATCTTTGGTTAATTCTCATCCACAGGAATTGGTTTATGCTTGTGCATCAAATGTTGTGTTAGAGTTAAGTCAGAGTGTAGATCAGCAGAAGCTTTCCTTTCAGATCTCTTCACTACAGATAGACAACCCACTTCAAAATTCTTCGTATCCTGTCATATTGTCATTCAATCATGACCACGAAGTCATTCCTCCTGATTGGGGAATGAAGAACAACAAAGCAATACTTTTAAGTGAAATTGTTCAGCAAGTTAGGGGTAATTCCTGTGATGCTGTAGTCTACGTTGACCTAGCAAAGTGGCGGAAAAAAGATGTTTCACTAGTTTCTTTTGAGTACATAAATATTAGGATTGGTGAATTTGGACTTGAGCTGGAGCTACAAACACTTTTATCCTTACTGGAGTTCGTAAAAGCAGTGCTTCCCAATTCTCAGGCTAGACTCCTGCCGCTCTCAGATCCAACGCTACGTCCTCTGATTTATGACACTGGTTCCAAGGATATAAGTTCAGAAGATACTCCACATGCAAGAAACATTCCTGTATTTAACAAAAACCAGAGAAGCATTGTAGCTCTGCCTATAGTGGTTCCAATAGGAGCTCCTTGGCAGCATATTCACTTGTTGGCTCGAAGACGCAGGAAAATTTATGTTGAAACATTTGACTTGGCCCCTATTCAGTTTACTTTAAGCTTCTGCAGTGCTCCCTGGATGCTTAGGAACGGCATTCTTACTTCAGGAGAGTCCCTTATCCATAGAGGTCTTATGGCTCTTGCCGATGTCGAGGGTGCTCGAATACATCTCAAACAATTGACAATTGCTCATCAAATTACTAGTTGGGAATCATTTCAGGAGATCCTTGTTGGGCACTATACCCGCCAAATTCTTCATGAGATTTACAAGGTTTTCGGCTCTGCTGGTGTTATTGGAAATCCCATGGGGTTTGCGAGGAATGTTGCATTTGGAATTAAAGATTTCCTGTCAGCTCCCAGCAGGAGTATCTCAAAGAGCCCAGCAGGAATTATTCAAGGAATGGCTCACGGAACCACAAGTCTCTTCAGTAGCACTATTTATGCTTTAAGTGATGCTGCCACTCAATTTAGTAAAGCTGCACACAAGGGTATTGTTGCATTTACATTCAATGACCATGATGTTGCAAGGATGGAGAAGCAGCAATTGGGTGAAGGATCGCGTAGCAAAGGAGTTATAGGTGAAGTGTTTGAGGGACTCACTGGTCTCCTTCAATCACCAATAAGAGGAGCTGAGAAACATGGTCTTCCAGGCGTTATCTCAGGAGTGGCCATGGGGATTACTGGACTTGTGGCCAGACCAACCGCTAGTATCCTTGAGGTAACTGGAAAAACCGCACAGAGTATAAGAAACCGAAGCAGGATTCATAACATAAGATCCCAAAGGCATAGGCTTCGTCTTCCGAGGCCTCTGAGTAGAGAACAACCTCTCAGGCCTTACTCATGGGAAGAAGCGGTCGGGACAGCAGTACTTATGGAGGTTGGAGATTCCCTGAAGTTCAAGGGCGAGAAGCTGGTGAAGTGCAAAGCCCTGAAACAAGAAGGAGCTTTCGTTGTAATCACAGGGAGACTGGTATTGGTTCTAAGCAGCCTGAGCTTGGTAGATTTCAGAAAACAGGGATTTCTCGGAGTTCCAATAGATTTGGTATGGAATATCGAAAGAGAAATCGGTTTGGAGAGTGTAATACATACAGATTGCAGCGGTGGAGTAGTCCGCATCATAGGAAGCAATTCAGATGGTGTATGGAACTGGAGACAGGACCAGCAAAAGAAGAGCAGCCCGACCAAAAAACGATGGAACAATCCTTCAGCACAGCCGCTTCTTCAGACTAACTTAGAGTTTCCATCGGAGGAAGAAGCAGAGGACTTGTTGAGTGTGTTGTTATCGACTATTGAAACTGGGAAAAGCCGGAGCTGGCACAGTCGATTTGTTTTAAGTCGAAGTAACATCACTTAA

Protein Analysis

3464

Amino Acids

386.45

Weight (kDa)

5.97

Isoelectric Point (pI)

49.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS13_N PF12624 1 - 554 1.9e-81 VPS13-like family N-terminal region
VPS13_N PF12624 586 - 831 1.9e-06 VPS13-like family N-terminal region
VPS13_M PF25033 1785 - 1897 1.3e-07 VPS13-like family middle region
VPS13_VAB PF25036 2070 - 2360 1.3e-15 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_VAB PF25036 2488 - 2721 3.6e-21 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_C PF25037 3335 - 3403 1.8e-07 Intermembrane lipid transfer protein VPS13, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 3572, 3678, 4247, 5412, 6155
AasI GACNNNNNNGTC 5 cut(s) 2066, 3607, 5880, 8597, 9642
AatII GACGTC 2 cut(s) 4280, 5878
Acc36I ACCTGC 1 cut(s) 7437
Acc65I GGTACC 2 cut(s) 5742, 8128
AccB1I GGYRCC 5 cut(s) 702, 1166, 1277, 5742, 8128
AccB7I CCANNNNNTGG 5 cut(s) 575, 4618, 7499, 7535, 8411
AccBSI CCGCTC 1 cut(s) 8863
AccI GTMKAC 3 cut(s) 2780, 6141, 8694
AccII CGCG 4 cut(s) 1240, 1672, 1855, 9601
AccIII TCCGGA 1 cut(s) 2248
AclI AACGTT 1 cut(s) 8387
AcoI YGGCCR 4 cut(s) 5361, 6343, 9708, 9732
AcvI CACGTG 1 cut(s) 2531
AcyI GRCGYC 4 cut(s) 4277, 5875, 6358, 6716
AdeI CACNNNGTG 1 cut(s) 7499
AfeI AGCGCT 1 cut(s) 826
AflII CTTAAG 2 cut(s) 1090, 1933
AflIII ACRYGT 6 cut(s) 642, 3469, 6880, 6932, 7562, 7933
AhlI ACTAGT 3 cut(s) 5087, 8734, 9242
AjiI CACGTC 1 cut(s) 2455
AjuI GAANNNNNNNTTGG 6 cut(s) 3470, 3502, 6652, 6684, 9569, 9601
AleI CACNNNNGTG 1 cut(s) 6885
AloI GAACNNNNNNTCC 8 cut(s) 2368, 2400, 4317, 4349, 6155, 6187, 8127, 8159
Alw26I GTCTC 9 cut(s) 3454, 5207, 5280, 6707, 8008, 9467, 9650, 10000, 10186
Alw44I GTGCAC 1 cut(s) 8189
AlwNI CAGNNNCTG 1 cut(s) 4618
Ama87I CYCGRG 2 cut(s) 1783, 6942
Aor13HI TCCGGA 1 cut(s) 2248
Aor51HI AGCGCT 1 cut(s) 826
ApaLI GTGCAC 1 cut(s) 8189
ArsI GACNNNNNNTTYG 4 cut(s) 2830, 2862, 7084, 7116
AseI ATTAAT 2 cut(s) 6537, 6953
Asp700I GAANNNNTTC 6 cut(s) 1477, 6483, 8601, 8655, 9255, 10168
Asp718I GGTACC 2 cut(s) 5742, 8128
AspLEI GCGC 5 cut(s) 827, 1672, 2801, 4197, 8199
AspS9I GGNCC 7 cut(s) 566, 2059, 5938, 6751, 7426, 9079, 10198
AsuC2I CCSGG 2 cut(s) 5817, 8133
AsuNHI GCTAGC 1 cut(s) 3968
AvaI CYCGRG 2 cut(s) 1783, 6942
AvaII GGWCC 5 cut(s) 2059, 5938, 6751, 7426, 10198
AxyI CCTNAGG 1 cut(s) 141
BaeGI GKGCMC 4 cut(s) 1198, 3130, 8193, 9279
BaeI ACNNNNGTAYC 6 cut(s) 37, 70, 4728, 4761, 8043, 8076
BalI TGGCCA 2 cut(s) 9710, 9734
BamHI GGATCC 2 cut(s) 235, 4474
BanI GGYRCC 5 cut(s) 702, 1166, 1277, 5742, 8128
BanII GRGCYC 7 cut(s) 2808, 4439, 5454, 5520, 6943, 9013, 9422
BbrPI CACGTG 1 cut(s) 2531
BceAI ACGGC 3 cut(s) 171, 3926, 9148
BcgI CGANNNNNNTGC 4 cut(s) 3344, 3378, 9815, 9849
BciVI GTATCC 5 cut(s) 3328, 5127, 7810, 8574, 9761
BclI TGATCA 3 cut(s) 289, 4006, 4120
BcnI CCSGG 2 cut(s) 5817, 8133
BcoDI GTCTC 9 cut(s) 3454, 5207, 5280, 6707, 8008, 9467, 9650, 10000, 10186
BcuI ACTAGT 3 cut(s) 5087, 8734, 9242
BfoI RGCGCY 2 cut(s) 828, 2802
BfrI CTTAAG 2 cut(s) 1090, 1933
BfuAI ACCTGC 1 cut(s) 7437
BfuI GTATCC 5 cut(s) 3328, 5127, 7810, 8574, 9761
BglI GCCNNNNNGGC 1 cut(s) 7777
BglII AGATCT 7 cut(s) 90, 1407, 1924, 2119, 2871, 2984, 8520
BmcAI AGTACT 3 cut(s) 3846, 7204, 9909
Bme18I GGWCC 5 cut(s) 2059, 5938, 6751, 7426, 10198
BmeT110I CYCGRG 2 cut(s) 1783, 6942
BmgBI CACGTC 1 cut(s) 2455
BmgT120I GGNCC 7 cut(s) 566, 2059, 5938, 6751, 7426, 9079, 10198
BmrI ACTGGG 2 cut(s) 7491, 10347
BmtI GCTAGC 1 cut(s) 3972
BmuI ACTGGG 2 cut(s) 7491, 10347
BplI GAGNNNNNCTC 2 cut(s) 6376, 6408
Bpu10I CCTNAGC 2 cut(s) 9125, 10031
BpuEI CTTGAG 8 cut(s) 71, 161, 1467, 2177, 6402, 6776, 8801, 9776
BpuMI CCSGG 2 cut(s) 5817, 8133
Bsa29I ATCGAT 3 cut(s) 781, 1029, 5841
BsaAI YACGTR 3 cut(s) 1416, 2531, 3470
BsaBI GATNNNNATC 2 cut(s) 4011, 4473
BsaHI GRCGYC 4 cut(s) 4277, 5875, 6358, 6716
BsaI GGTCTC 1 cut(s) 9650
BsaWI WCCGGW 1 cut(s) 2248
Bse118I RCCGGY 3 cut(s) 3732, 6345, 6520
Bse21I CCTNAGG 1 cut(s) 141
Bse3DI GCAATG 8 cut(s) 292, 2809, 2916, 3623, 3802, 3896, 6110, 7787
Bse8I GATNNNNATC 2 cut(s) 4011, 4473
BseAI TCCGGA 1 cut(s) 2248
BseCI ATCGAT 3 cut(s) 781, 1029, 5841
BseJI GATNNNNATC 2 cut(s) 4011, 4473
BseMI GCAATG 8 cut(s) 292, 2809, 2916, 3623, 3802, 3896, 6110, 7787
BseRI GAGGAG 9 cut(s) 2267, 2578, 2809, 3688, 5958, 5961, 6984, 7309, 9681
BseSI GKGCMC 4 cut(s) 1198, 3130, 8193, 9279
BseYI CCCAGC 3 cut(s) 5513, 9398, 9421
BsgI GTGCAG 8 cut(s) 3824, 3967, 4467, 5656, 6967, 6997, 7204, 9504
Bsh1236I CGCG 4 cut(s) 1240, 1672, 1855, 9601
Bsh1285I CGRYCG 1 cut(s) 9897
BshNI GGYRCC 5 cut(s) 702, 1166, 1277, 5742, 8128
BshVI ATCGAT 3 cut(s) 781, 1029, 5841
BsiEI CGRYCG 1 cut(s) 9897
BsiHKCI CYCGRG 2 cut(s) 1783, 6942
BsiSI CCGG 9 cut(s) 1281, 2249, 3554, 3733, 5817, 6346, 6521, 8133, 10348
BsiWI CGTACG 1 cut(s) 1435
BsmAI GTCTC 9 cut(s) 3454, 5207, 5280, 6707, 8008, 9467, 9650, 10000, 10186
BsmBI CGTCTC 1 cut(s) 6707
BsmI GAATGC 6 cut(s) 1275, 1529, 2997, 7708, 7888, 9135
Bso31I GGTCTC 1 cut(s) 9650
BsoBI CYCGRG 2 cut(s) 1783, 6942
Bsp13I TCCGGA 1 cut(s) 2248
Bsp1407I TGTACA 1 cut(s) 3268
Bsp19I CCATGG 4 cut(s) 215, 2653, 9345, 9711
BspDI ATCGAT 3 cut(s) 781, 1029, 5841
BspEI TCCGGA 1 cut(s) 2248
BspFNI CGCG 4 cut(s) 1240, 1672, 1855, 9601
BspHI TCATGA 7 cut(s) 1693, 2169, 3277, 4867, 5115, 8587, 9298
BspMAI CTGCAG 4 cut(s) 361, 1108, 3621, 9110
BspMI ACCTGC 1 cut(s) 7437
BspOI GCTAGC 1 cut(s) 3972
BspQI GCTCTTC 2 cut(s) 4878, 10205
BspT107I GGYRCC 5 cut(s) 702, 1166, 1277, 5742, 8128
BspTI CTTAAG 2 cut(s) 1090, 1933
BspTNI GGTCTC 1 cut(s) 9650
BsrBI CCGCTC 1 cut(s) 8863
BsrDI GCAATG 8 cut(s) 292, 2809, 2916, 3623, 3802, 3896, 6110, 7787
BsrFI RCCGGY 3 cut(s) 3732, 6345, 6520
BsrGI TGTACA 1 cut(s) 3268
BssAI RCCGGY 3 cut(s) 3732, 6345, 6520
BssNAI GTATAC 2 cut(s) 2781, 6142
BssNI GRCGYC 4 cut(s) 4277, 5875, 6358, 6716
Bst1107I GTATAC 2 cut(s) 2781, 6142
BstACI GRCGYC 4 cut(s) 4277, 5875, 6358, 6716
BstAFI CTTAAG 2 cut(s) 1090, 1933
BstAPI GCANNNNNTGC 1 cut(s) 3625
BstAUI TGTACA 1 cut(s) 3268
BstBAI YACGTR 3 cut(s) 1416, 2531, 3470
BstDSI CCRYGG 4 cut(s) 215, 2653, 9345, 9711
BstENI CCTNNNNNAGG 1 cut(s) 3717
BstFNI CGCG 4 cut(s) 1240, 1672, 1855, 9601
BstH2I RGCGCY 2 cut(s) 828, 2802
BstHHI GCGC 5 cut(s) 827, 1672, 2801, 4197, 8199
BstMAI GTCTC 9 cut(s) 3454, 5207, 5280, 6707, 8008, 9467, 9650, 10000, 10186
BstMCI CGRYCG 1 cut(s) 9897
BstSLI GKGCMC 4 cut(s) 1198, 3130, 8193, 9279
BstUI CGCG 4 cut(s) 1240, 1672, 1855, 9601
BstXI CCANNNNNNTGG 5 cut(s) 975, 1045, 2660, 5948, 6181
BstZ17I GTATAC 2 cut(s) 2781, 6142
Bsu15I ATCGAT 3 cut(s) 781, 1029, 5841
Bsu36I CCTNAGG 1 cut(s) 141
BsuI GTATCC 5 cut(s) 3328, 5127, 7810, 8574, 9761
BsuTUI ATCGAT 3 cut(s) 781, 1029, 5841
BtgI CCRYGG 4 cut(s) 215, 2653, 9345, 9711
BtgZI GCGATG 3 cut(s) 261, 2697, 7515
BtrI CACGTC 1 cut(s) 2455
BtsI GCAGTG 7 cut(s) 4313, 5908, 6317, 7191, 8193, 8835, 9115
BveI ACCTGC 1 cut(s) 7437
CaiI CAGNNNCTG 1 cut(s) 4618
CciI TCATGA 7 cut(s) 1693, 2169, 3277, 4867, 5115, 8587, 9298
CfoI GCGC 5 cut(s) 827, 1672, 2801, 4197, 8199
Cfr10I RCCGGY 3 cut(s) 3732, 6345, 6520
Cfr13I GGNCC 7 cut(s) 566, 2059, 5938, 6751, 7426, 9079, 10198
ClaI ATCGAT 3 cut(s) 781, 1029, 5841
CseI GACGC 5 cut(s) 2223, 3192, 6347, 6724, 9054
CsiI ACCWGGT 2 cut(s) 6231, 6747
CspCI CAANNNNNGTGG 4 cut(s) 8097, 8132, 8427, 8462
DraI TTTAAA 5 cut(s) 2329, 3867, 4903, 6792, 7764
DraIII CACNNNGTG 1 cut(s) 7499
DrdI GACNNNNNNGTC 5 cut(s) 2066, 3607, 5880, 8597, 9642
DseDI GACNNNNNNGTC 5 cut(s) 2066, 3607, 5880, 8597, 9642
EaeI YGGCCR 4 cut(s) 5361, 6343, 9708, 9732
EciI GGCGGA 2 cut(s) 417, 8731
Ecl136II GAGCTC 3 cut(s) 2806, 4437, 9011
Eco147I AGGCCT 2 cut(s) 9847, 9874
Eco24I GRGCYC 7 cut(s) 2808, 4439, 5454, 5520, 6943, 9013, 9422
Eco31I GGTCTC 1 cut(s) 9650
Eco32I GATATC 4 cut(s) 1087, 2140, 4875, 5467
Eco47I GGWCC 5 cut(s) 2059, 5938, 6751, 7426, 10198
Eco47III AGCGCT 1 cut(s) 826
Eco53kI GAGCTC 3 cut(s) 2806, 4437, 9011
Eco72I CACGTG 1 cut(s) 2531
Eco81I CCTNAGG 1 cut(s) 141
Eco88I CYCGRG 2 cut(s) 1783, 6942
EcoICRI GAGCTC 3 cut(s) 2806, 4437, 9011
EcoNI CCTNNNNNAGG 1 cut(s) 3717
EcoO109I RGGNCCY 1 cut(s) 7426
EcoRV GATATC 4 cut(s) 1087, 2140, 4875, 5467
EcoT22I ATGCAT 6 cut(s) 3252, 4460, 5160, 5164, 7370, 8161
EcoT38I GRGCYC 7 cut(s) 2808, 4439, 5454, 5520, 6943, 9013, 9422
Esp3I CGTCTC 1 cut(s) 6707
FauI CCCGC 5 cut(s) 3410, 3873, 6419, 7860, 9293
FauNDI CATATG 2 cut(s) 1663, 5707
FbaI TGATCA 3 cut(s) 289, 4006, 4120
FblI GTMKAC 3 cut(s) 2780, 6141, 8694
FriOI GRGCYC 7 cut(s) 2808, 4439, 5454, 5520, 6943, 9013, 9422
GlaI GCGC 5 cut(s) 826, 1671, 2800, 4196, 8198
GsaI CCCAGC 3 cut(s) 5517, 9402, 9425
HaeII RGCGCY 2 cut(s) 828, 2802
HapII CCGG 9 cut(s) 1281, 2249, 3554, 3733, 5817, 6346, 6521, 8133, 10348
HgaI GACGC 5 cut(s) 2223, 3192, 6347, 6724, 9054
HhaI GCGC 5 cut(s) 827, 1672, 2801, 4197, 8199
Hin1I GRCGYC 4 cut(s) 4277, 5875, 6358, 6716
Hin6I GCGC 5 cut(s) 825, 1670, 2799, 4195, 8197
HinP1I GCGC 5 cut(s) 825, 1670, 2799, 4195, 8197
HincII GTYRAC 9 cut(s) 834, 3645, 3748, 4020, 4051, 5035, 7239, 7846, 8701
HindII GTYRAC 9 cut(s) 834, 3645, 3748, 4020, 4051, 5035, 7239, 7846, 8701
HindIII AAGCTT 8 cut(s) 535, 1128, 2094, 4240, 7851, 8351, 8507, 9100
HpaI GTTAAC 2 cut(s) 4020, 7846
HpaII CCGG 9 cut(s) 1281, 2249, 3554, 3733, 5817, 6346, 6521, 8133, 10348
Hpy99I CGWCG 1 cut(s) 5880
Hsp92I GRCGYC 4 cut(s) 4277, 5875, 6358, 6716
HspAI GCGC 5 cut(s) 825, 1670, 2799, 4195, 8197
Kpn2I TCCGGA 1 cut(s) 2248
KpnI GGTACC 2 cut(s) 5746, 8132
KroI GCCGGC 3 cut(s) 3732, 6345, 6520
KroNI GCCGGC 3 cut(s) 3734, 6347, 6522
Ksp22I TGATCA 3 cut(s) 289, 4006, 4120
KspAI GTTAAC 2 cut(s) 4020, 7846
LguI GCTCTTC 2 cut(s) 4878, 10205
MabI ACCWGGT 2 cut(s) 6231, 6747
MbiI CCGCTC 1 cut(s) 8863
MfeI CAATTG 7 cut(s) 168, 697, 866, 7281, 9218, 9225, 9584
MlsI TGGCCA 2 cut(s) 9710, 9734
MluNI TGGCCA 2 cut(s) 9710, 9734
Mox20I TGGCCA 2 cut(s) 9710, 9734
Mph1103I ATGCAT 6 cut(s) 3252, 4460, 5160, 5164, 7370, 8161
MroI TCCGGA 1 cut(s) 2248
MroNI GCCGGC 3 cut(s) 3732, 6345, 6520
MroXI GAANNNNTTC 6 cut(s) 1477, 6483, 8601, 8655, 9255, 10168
MscI TGGCCA 2 cut(s) 9710, 9734
Msp20I TGGCCA 2 cut(s) 9710, 9734
MspA1I CMGCKG 5 cut(s) 1109, 2603, 3159, 6551, 10140
MspCI CTTAAG 2 cut(s) 1090, 1933
MspI CCGG 9 cut(s) 1281, 2249, 3554, 3733, 5817, 6346, 6521, 8133, 10348
MssI GTTTAAAC 1 cut(s) 3867
MunI CAATTG 7 cut(s) 168, 697, 866, 7281, 9218, 9225, 9584
Mva1269I GAATGC 6 cut(s) 1275, 1529, 2997, 7708, 7888, 9135
MvnI CGCG 4 cut(s) 1240, 1672, 1855, 9601
NaeI GCCGGC 3 cut(s) 3734, 6347, 6522
NciI CCSGG 2 cut(s) 5817, 8133
NcoI CCATGG 4 cut(s) 215, 2653, 9345, 9711
NdeI CATATG 2 cut(s) 1663, 5707
NgoMIV GCCGGC 3 cut(s) 3732, 6345, 6520
NheI GCTAGC 1 cut(s) 3968
NmeAIII GCCGAG 1 cut(s) 2827
NmuCI GTSAC 9 cut(s) 638, 847, 1214, 1260, 3914, 4703, 5849, 6464, 7400
NsiI ATGCAT 6 cut(s) 3252, 4460, 5160, 5164, 7370, 8161
OliI CACNNNNGTG 1 cut(s) 6885
PaeI GCATGC 3 cut(s) 5162, 7229, 7368
PagI TCATGA 7 cut(s) 1693, 2169, 3277, 4867, 5115, 8587, 9298
PceI AGGCCT 2 cut(s) 9847, 9874
PciI ACATGT 4 cut(s) 642, 6932, 7562, 7933
PciSI GCTCTTC 2 cut(s) 4878, 10205
PcsI WCGNNNNNNNCGW 1 cut(s) 2460
PctI GAATGC 6 cut(s) 1275, 1529, 2997, 7708, 7888, 9135
PdiI GCCGGC 3 cut(s) 3734, 6347, 6522
PdmI GAANNNNTTC 6 cut(s) 1477, 6483, 8601, 8655, 9255, 10168
Pfl23II CGTACG 1 cut(s) 1435
PflFI GACNNNGTC 3 cut(s) 5039, 6749, 7234
PflMI CCANNNNNTGG 5 cut(s) 575, 4618, 7499, 7535, 8411
PfoI TCCNGGA 1 cut(s) 4306
PmaCI CACGTG 1 cut(s) 2531
PmeI GTTTAAAC 1 cut(s) 3867
PmlI CACGTG 1 cut(s) 2531
Ppu21I YACGTR 3 cut(s) 1416, 2531, 3470
PpuMI RGGWCCY 1 cut(s) 7426
PscI ACATGT 4 cut(s) 642, 6932, 7562, 7933
PshBI ATTAAT 2 cut(s) 6537, 6953
PsiI TTATAA 5 cut(s) 3572, 3678, 4247, 5412, 6155
Psp124BI GAGCTC 3 cut(s) 2808, 4439, 9013
Psp1406I AACGTT 1 cut(s) 8387
Psp5II RGGWCCY 1 cut(s) 7426
PspCI CACGTG 1 cut(s) 2531
PspFI CCCAGC 3 cut(s) 5513, 9398, 9421
PspLI CGTACG 1 cut(s) 1435
PspPI GGNCC 7 cut(s) 566, 2059, 5938, 6751, 7426, 9079, 10198
PspPPI RGGWCCY 1 cut(s) 7426
PsrI GAACNNNNNNTAC 2 cut(s) 7908, 7940
PstI CTGCAG 4 cut(s) 361, 1108, 3621, 9110
PstNI CAGNNNCTG 1 cut(s) 4618
PsyI GACNNNGTC 3 cut(s) 5039, 6749, 7234
PvuII CAGCTG 3 cut(s) 2603, 3159, 6551
SacI GAGCTC 3 cut(s) 2808, 4439, 9013
SapI GCTCTTC 2 cut(s) 4878, 10205
Sau96I GGNCC 7 cut(s) 566, 2059, 5938, 6751, 7426, 9079, 10198
ScaI AGTACT 3 cut(s) 3846, 7204, 9909
SexAI ACCWGGT 2 cut(s) 6231, 6747
SinI GGWCC 5 cut(s) 2059, 5938, 6751, 7426, 10198
SpeI ACTAGT 3 cut(s) 5087, 8734, 9242
SphI GCATGC 3 cut(s) 5162, 7229, 7368
SseBI AGGCCT 2 cut(s) 9847, 9874
SspI AATATT 3 cut(s) 2325, 4795, 8758
SstI GAGCTC 3 cut(s) 2808, 4439, 9013
StuI AGGCCT 2 cut(s) 9847, 9874
TatI WGTACW 7 cut(s) 3161, 3268, 3844, 5710, 7202, 8748, 9907
TauI GCSGC 5 cut(s) 1742, 4781, 5069, 8863, 10258
TseFI GTSAC 9 cut(s) 638, 847, 1214, 1260, 3914, 4703, 5849, 6464, 7400
Tsp45I GTSAC 9 cut(s) 638, 847, 1214, 1260, 3914, 4703, 5849, 6464, 7400
Tth111I GACNNNGTC 3 cut(s) 5039, 6749, 7234
Van91I CCANNNNNTGG 5 cut(s) 575, 4618, 7499, 7535, 8411
Vha464I CTTAAG 2 cut(s) 1090, 1933
VneI GTGCAC 1 cut(s) 8189
VpaK11BI GGWCC 5 cut(s) 2059, 5938, 6751, 7426, 10198
VspI ATTAAT 2 cut(s) 6537, 6953
XagI CCTNNNNNAGG 1 cut(s) 3717
XcmI CCANNNNNNNNNTGG 1 cut(s) 7464
XmiI GTMKAC 3 cut(s) 2780, 6141, 8694
XmnI GAANNNNTTC 6 cut(s) 1477, 6483, 8601, 8655, 9255, 10168
ZraI GACGTC 2 cut(s) 4278, 5876
ZrmI AGTACT 3 cut(s) 3846, 7204, 9909
Zsp2I ATGCAT 6 cut(s) 3252, 4460, 5160, 5164, 7370, 8161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.