Rh2CG450900

Vacuolar protein sorting-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0001657
Physical Location & Seq
Forward (+)
61168200 .. 61196264
28065 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG450900.1

Sequence Viewer

Length: 10320 bp
ATGTTCGAAGGACTCGTCAGCCAGATTCTTCACGGCTATCTCGGTCGCTACGTCAAGGATTTTCACAAGCACCAGCTCAAGATGGAGATTTGGAATGAGGAAGTGTTCTTGGAAAACGTCGAGCTTAGTCTCGAAGCCTTTGATTATCTCCAGTTGCCTTTCGCTCTCAAACAAGGTCGGATTGGAAAGATAAGCATCAAAGTTCCATGGAAAACGCTTGGTCGGGACCCCTTTGTAATTAGTTTGGAAAATGTCTTCCTATGTGCATCCCAACGAGATGATGAAGAGTGGAGTTTGGATGAAGTTGAAAAACGAGAGTTTGCTGGAAAAAAGGCCAAACTTGCTGCAGCAGAACTGGCCAAATTATCAAAATGTGTATGCGAAAACCAGGCTGGGCTTAGATCAATAATTACTGCTAAGGTTCTTGACAGCATCCAAGTGTCAATCAGAGATTTTCATATCTTGTACCATGACAAGCTCAGTGGCTCGGCATGTAATATTTTTGGTTTGAAGTTTTCCAGCTTGAGGACTATGAAGCAAAATCCTTCCGGGTCACTTGCAAAGGGAAGAGGGGGCGGCCAAGTTAACAAAACTGTGGAGATTATGGGTTTGGAGTTTTACTGTGGCACACTTGATGGGGCGGTGGAGTTGATGGCTATGAACAATGATGGGGATTCCGTAGTATGGCAAGATATAAGATATGACGGGAAAAGATATAACAACTCCATACTGTCACCATGTGATGTTTCCATGTCACTCTCGGTCAACAGATCAGGAGAGCTTGATAGCAAAATCCCGCAGTACTCCATCACCGCTGAGATAACTGACTTGGTGATGTGCTTAGATGAGGTTCAGTTGCAACAGATTTTGTTTCTGTGGGATTATTTTTGTACATGTGAATTGAGAAATAAGTATGGGCGTTATCGTCCCTGGAGTAGTCCGTTATCAAAAAAGGTGAAGGGTTGGCAAATGTTATGGTGGCATTATGCGCAAGAATCTATCTTATCAGATGTACGGAAGAGATTAAAGAAAACATCGTGGAGACACTTTGGACAGAGACTAAGCTCTTGTCGGAAGTATGTTAACCTATATAAGACTAAGTTGGATTTTCTTCGCCATGATCAGCCAATTGATGAAAGTACTCGATGGGAATTGGAGCAGATGGAGAAAGAATTAGACATAGATGATATTTTAAGTTACAGGTCGGCTGCAGAATGTGAGTTGCAGGAGTTTTTGGTGAACTCTTCAACTGGAAAATCCCGTGGATGGCTGAACTGGCTATCTCTTGGTATGCTTGGTGCTGGAGGAACAGATGACTTGGGTCAATTTTCTGGGGCTGTTTTTGTTTCTGATGCAGTTATTAAGGATATATATGAGGCGACAAAGTTCAATCCTCCTATTTTATCCAATGGGGATGCTCGAACAACTGATAAGATTGATATATGCGCACTCCATTTCAGCATCAATCGGATTTCTGCAACACTGCGTAACATGAAGTATGGCCAAGAAATTGCAGAGTTGATGTTGAATGGAGTGACTACGGAGTGCAAATTTAGGGAAGAATCTGCAGCCATTGTCACCATTGTGAACTCAGGGCAGATGGTTTATCCTTGTAACAAGAAAGTCATTCTGCATTTGCGAAGGCCTAATAATGAGAAGAACGAACTGGAAAACGAGAATCCTTCCTGTAGATTGCAAGTGGATGTATCATCAAACCTCGAGGCTGAATTGTCCATTAAGGGGATGCTTCATCCATTAGAAGTCACCATTGATGCAGAATTTTTCTTAAAGTTGATGGATTTTCTTGGAGCTTTAAAATCCTTTGAAAGTCAGCATGGAAGGGTCCTTCTGTCGCTAAATGGGATAGAAAATGTCAATGGTCGACTGTTGTCGAAAGCTGAATACCTTTTATCACATCATAGGAAAGTGGTGTGGGATGTTACTATCTTCAATATCATCATAAATGTTCCTTGGAGAGAGGCAATAACCGATCCACATAACTTGGTTTTTGAAGCAGGCTCTCTTCTTTTTAGGACTAAATGTGATATGGGATCTCAGCCATCAGATGATGAGGAACAATTTTATACTCTGAAAAAGTTCTTAACTTCCGTTTCCAGCTGTAATATTTCTACGTGCGTCCAAATTCAAGATCTGTACGATCACTATGAGGTCAAGTTAAATGATTTTGAGTTGAAGGTAACGATGCCTTCTCATTCTTCTCCAATTTCTATCTTGGAGAAACTTAGTCCTTCTGTCTCCTTTGCATTTTGCTTGATCCAAGATGAGTCAATATTGAAACAGTTGGAGGCTTGTGTCATTGTATCATCACTTCATGCACATTTTTCTCCATCGATATATGCTGCAATGCTGGGATTGATAGAATATCTAGGTGCTCTGCAATTGAATTTTGATTCTCTACCCTTGGGAACTATTGATTCACTTGATGCCACATCAAATGGATTAGGGAATCCTGTTTTCGGTTTCTCTACCAATATCAAACTGGAGACAGTGAAGATTGAAGTCGAACTGGAAAATGAAGAAGAAAATAGCTCGTCATTCATGCTTAAATTCCAACAATTGGACATGGGTTATTCGCTTTCAAAAATTGAGGAATGCTGGATCTTAATGAACGCATTGAGTATCACGACTTCTAAATTGGCTGATAAAAGTGATAGTCGGATTTTGTATTCATCTGGAAATCAATCATCTATGAATGCTTTACATCCACATGAGATTGGGATTGGCAATAGAAATGATCATTTTGCCAACACCATTGGAAATAATGAAGCTTGCTTTACTTTACAATATGAATCTCATCCGAAGGAGACTGTTCCTCAAAAATGTAGAATATGCTTGAATAACGGTGATCTCCACTGCTACCCATATGTTATCCGGCTTCTGGTTGCATTTTTTGATAAACTTTCTACTTATGGTGCATCTAATCCTGGTAAGAACACTTTGAGCTCATCTGTGGATGCTAGGTATCCAAAAAGTGTTCCTGGTTTTGGGTCTCAAAGGTTTGGTTTCTCCAACTTTGTAGAAACTGGGTCCTCTGAGTATGCAAGCATACCTTTAGATCATTTTCCTTTTGTTATGCTATCCAATGCTGCTTCCCTTGGTAACCTTGAAAGTTCTTTGCTTTATGCCAGTCCCGAGTGGAGAAAGTATTTCAGTATAAGGGACAGCAGAATCAGCAGCCCACTATCCAGCATAAAGGAGGTATCTAAAAAGTTCCATGCCCCAGCATTGAAGCACTCATCTGTGGTTGAAGCTTCTGCTGTGTGTGGGAGTTCTGCCACTACTAGTAGTCCGCTTGTAATTGATGTCAATCTCTGTGGAATCAGAGTGCATTTTCATGATTCAAAATGCATTGTTGGGACGATTACCCTGCCTAGGTCCAACTCTTCAGTATTAATTTCTGAAAACAGCTTTGATATATTGTGTTCTACTGAGGGGTTAGTTCTCAGTTCATCTTGGTCGTCACAGAATTTACGCGAGTTTCTGTGGGGCCCCTCGGTCTCGAATTTATCTCCTATTTTAAATGTACGTGTGAGGAAAGAATGTGGGCCATTGAGTTCGCATGTTGAACTATGCTTTGGCATACAGCATGTATATTGCATCTTACCTCCTGAATATCTGGCCATAATAATTGGTTACTTTTCATTGTCTGATTGGAGTTCAGATTCTAATGACCAGCTTGTCACCATGGGGCATGAAGATACTGAAAGTGAAAGTGAATGTTCCTTTATCTACAAGATTGAGATACTGGACTCTGTTTTAGTTGTGCCCGTGGAAAGCAACGAGGGTCAGTTTCTAAAGAGTGAACTTCAGCAGTTCTACTGTACATTTATTCAAAGCAGTTCAAATAATGTATTGAAGGACATTCCCCATGAATGTTGGGTCCCGACTGATAAACTTGCTAAAAGAAATCATTGTTTAAATTTATTTGGACGAGACTTGTTTCTATCATTCCTGTCTTTCAAGGACAATCAATCCAATTCCTTTGTAGATGTTCCGTTAATTGCTTCCCTAGGTGCTGACGTTTGGGTGAAAATACCTTGTGAAAGTGAATCGTCATTTGAAAGTTCTCCCTCAAACATTTGTGTCATGATCAGAGTTGGAAACTGTCAGCTTAAGCCTGAGGATGATCACTTTTTTTATGGATTTCAGGGGCTAAATGATATCATAAATCAATTTTCTGTAGTTTCTGATGTATCTGAATGTTTCAAGTCTGATGTTCTACAATTTCTTCAGTCAAAAAGGTGCTTAGCACAGAAAAATGCAGTTCCACCTGTTGTTTCAAGCATTAATTATACCGAAGTTAGATGCTATATCAATTCATTGTTGATACAGTTGAATCCCTGCCAAAGAGTCTCAGAAGATCCTATTGCTACTGCTGAAATGAAATTCATCTGCTCTGCATCATTGAGAAATGACACTCTCTTAAGTGTAGCTCTAAGTTTTTCTTCCCTAGAAATGTGTTCATTACCTAATTCTTTTGTATTAGCAAGATGCAAGTCCACAAGCTCAACCTCGTCAGTTCTTGAATTTTCTCTTACCAAAGAAAAAGATGGTGTAAATGAACTTCACGTTTCCTTGCCTTGTGTTGAAGTGTGGTTACATTTGTCTTACTGGAATGAGGTTGTTGACCTTTTCAAATCTTATGCTGGACAATCATCCACAAGTCTGCCGGACAACTTAGAGCAGGACACTGATGCCCTCATTGTGAGCTCGGAGAATATATTCATTACATTTTACTTACCTGTTTGGACTGATGACCGAGCTTTTGGGGAATATCAGGGAGAGGAATGTCATGTAGATGGCTCTACAAATGGGTTATCTGACATAGTTGAAGCAAAAGCCTTTAGGTCCATTGCAGTTACTTTGTGCAGTAGAAGTAGTGAACTTTTTGTTGATGGAACAAATGTGAAAGTGAAATCCGACATAGAAAAACTGGAGGGCATGGTATTGGTAAGCCAGGATGGAAGTGTTCAATCTTCACCCTTTTTCCAGATATCTCAGGTGCTTTTGGTAGCTGACATAAATAACCTTATGGAGCTTATGCATGTTGAAGTAGATGTTCAATTTGATCATTTAGATGTATGGATTTCGCACAGCATTCTCTACTTCTGGCATGGTGTACAATTCAGTGTTGCTGAAGGAGGGCCTTCTCAATTTTCTTTTGGTAGAATTGATGTTAAAGTCCAGCTTAGGAAGGTTTCTTTTCTGCTAAGCGATGGAAGGTGGAGTTGTAGTGGACCCCTGTTTCAGATTCTCTTGGGGAACGTCCTCTTGCATATTACTGTGACTGAAAATAACCTCGAAGGTTTAGTTTCGGGTGACCTTCAAGTGAACTACAATAACATTCACAAGGTGTTCTGGGAGCCTTTTATTGAACCTTGGCAGTTTGAGGTCAATGTGATTAGAAAACAAGAGATGAGTCTCAGCAGCTCCAATTTGACAGATATCCATCTGAAATCAGCTGCACACCTTAATGTGAACTTCACTGAATCCCTTATAGAGTGTGTTTTCAGGACGGTTGAGATGATCAAGGATGCTTGGGTTCTAGTGAGTCCAAATGATCTTCCTGAAAGCCAAAAGTTATTAAATTCTCCGTTTGCTAAGCACACATATGCAGGAAAATATGCTCCTTATGTACTTCAAAACTTGACATCGCTGCCTCTAGCATATTGTGTTTATCAAGGCCCAATTAATTCTGATGAGTTGGATGTCTCAGAAACGAATAGAAAATATGTGCAACCAGGTTCTTCTATTCCAATATATATCGATGATACTCCTGAGAAACAACTTATTCATGTTAAGCCAGCACACTTCTCTGAGAGACTTTTTGACCAGAAGGCAAATGGGGTTCGCCATCAGTATATTACCATTCAACTTGATGGAACATCAGTGCCTTCTGAACCGATTTCAATGGATCTTGTAGGACTTACCTACTTTGAGGTTGATTTTTCTATGTCATACAGTGACAATATGGAAAACCATGGAACAAATGCCAATGCTGGTTTTGTTGTTCCTGTTGTCTTTGATGTTTCAGTGCAGCGGTACAGCAAATTAATCCGATTATACTCAACGGTTATACTTTCGAATTCAACTTCCATGCCATTGGAGCTGCGATTTGATATTCCATTTGGTGTGTCCCCAAAGATCTTAGATCCAATATATCCTGGTCAAGAGTTACCACTGCCTCTACACTTGGCCGAAGCTGGTAGGATTAGATGGCGTCCAATTGGCGATTCTCATCTCTGGAGTGAAGTTTATAACCTCTCAAACCTGCTATTTCAGGAGGGCAAAATTGGATTTCTCAAGTCTTTTGCTTGCTATCCAGCCCATCCCAATAGTGATCCATTTCGCTGTTGTATCTCAGTTAGAAACGTCAGTTTACCTTCACCTGTAAGGTCAAGAAAGAGTTCTTTAAAGCAAACAGTTGCAAGTGGTGGTCAAATATTGCACAAGGACGAGGCAAAAAAGCAGTTTATTCACCAAGTAGTCCTCAGTATCCCTTTAGTAGTGAATAACTATCTTCCCGATGCAGTGACATTGACGATAGAAAGCGGTGGGATTACCCGGACTGCATTTCTTTCAGAGGTGGAAACTTCTTTTCATAATGTTGATCCTTCTCATCAGCTGAGATTGGAGATCCATATGCATGGCTTTAAAACAGCTATTTTGGATTTTCCACGTACTGAAATATTCTGTAAAAAGGCTAAGTTTGGTGGCACGAAGTTCTCACTTTCTGAAATTGTGACCTTTGACAGAGACTCAACAAATGGTCCAATGTATGTCACAGTGGAAAAGGTGATGGATGCATTTTCTGGAGCCAGGGAACTCTTTATCTCTGTTCCATTTCTGTTATATAATTGCACTGGCTTTCCGCTCTTCATTTCTGAATCTGCCAGTGAAATGAAAGGAGTAAGCTGCATTGTGCCTTCTTGTTATGATATGGCTGATCAAGAAGTACTTCAGGGAAAAAAGGATGGTCTTGGTCTGGTATCTTCTAATCATAATCCAAATGCTAGAGATTCATATACAATGGGAAGTTCTTCCTCAAGAGTTCACATTGTCTCAATTAGAGACAATGCTACAACTCACAAAGAAATAAGTTTTAGCAAGCCTCTTTACTCTGAAGACAACTATCATGAGCTTTTAAGCAAACGTAATTTAGACAGGGAAAACTCACTTTCCAACAGTTCACAGAATAGATCGAGTTCAAGCAGTCAGTTGACCTCAAAAGATTTAAACTCTAGTGGTTATGAGCGTGGAAGAGTAAGGGCATGCATGTTCTCTCCTAAACCAATTTCCTCTGCTGGTGAAGTAATGGTTAGAGTGAGTAGGTGTATGCCTGAATATGTAACGGAAAAGATGCCAAATTCTCTATGGTCAAGTTCATTTCCCCTTATTCCACCTAGTGGTTCAACTACTGTCCTTGTTCCTCAACCATCGTCAAATGCGGCTTTTATGATGTCCATTACGTCCAGTGCAGTTGCTGCACCATTTGCTGGGAGGACAAGTGCAATTACCTTCCAACCTAGATACATCATCAGCAATGCATGCAGTAAGAACTTATGTTATAAGCAGAAAGGAACCGAATTTTCTTTTCAATTGGGTACAGGTGAACATTCTCATCTTCACTGGATGGATACAACCAGGGACTTACTCGTTTCAATTCGTTATAATGAGCCTGGATGGCAATGGTCAGGTGGCTTCTTGCCAGACCATCTCGGTGACACTCAAGTGAAAATGCGGAATTATCTCTCTGGTTCCTTAAATATGATACGGGTTGAAGTGCAAAATGCTGACGTCTCCGTGGGAGATGAAAAGATTGTTGGAAACTTCTATGGAAATTCTGGGACAAACTTGATTCTTGTGTCAGATGATGAGACTGGGTATATGCCCTACAGGGTTGATAATTTTACTAACGAGAGGCTAAGGATCTACCAACAAAGATGTGAAACCTTTGAGACTATTGTTCAGTCTTACACTTCTTGCCCTTATGCCTGGGATGAACCATGCTATCCACATCGTCTCACTGTGGAGGTACCTGGTAAGCGTGTTTTAGGGTCATACGCTCTTGATGATGTAAAAGAATACAGTCCGGTGCAATTACCATCATCTGCTGAGAAACCTGAGAGAACATTGCATATATCCATCCATGTTGAGGGAGCAACAAAGGTCCTCCATGTTATTGATTCAAGTTACCATGTCATGAATGACAACAGAAGTATTAGTCTACCTCACTTAAAAGACAAAGGGAAGCATGAACAGAAACAGGACAAGTTTATTGGTTTCATGGAAAGAATTTCAGTTTTTATTCAACAGATTGGCATCTCTGTGATCAATATTCACCCTCAGGAGTTGCTTTTTATATGTGCAAAGAGCATTACAGTTGATCTGGTACAGAGTTTGGATCAACAAAAACTTTCCTTCCAAATCGCATCATTGCAAGTCGATAATCAGCTTCGATCTTCCCCATATCCTGTTATGTTGTCTTTTGATCGTGAGTACAAAAACAATCCAGCTGGCCATGTGATTAGGGAGGATGATGTTAAACCAAGTGAAAGGATTTTGCAAAGGACTTCTCGCAATTTTGAACCTGTATTCTGCCTAGCTGTATCTAAGTGGAGGAAGAAAGATGTCTCACTGGTTTCGTTTGAATACATAAGCTTAAGAGTTGCAGATGTTTGTCTTGAGCTTGAACAAGAATTGATATTAAGCCTATTTGGCTTCATAAGAAATGTATCTTCAAGGTTCCAGAGTAGAGTCTTGCCATTATCAGATCCGTTCCTGCACCATCCTTCTAATGATGCTGGCTCAATGGATGCGTATGCAACTGATAACCAACTTCACTTAATGAGTGTTCCTCTGCTTAATGAAAACCACAAGCAAAGACTCTCACTACCTTCAATAGTTCCAATTGGAGCTCCTTGGCAGCAAATTTACCTTTTAGCTAGAAGACAGAAAAAGATATATGTAGAAGTGTTTGAATTTTCCCCCATCAAGTTGACCCTAAGCTTTTCCAGCACTCCATGGATGCTTAGAAATGGGATTCTTGCAGCAGGAGAATCTGTTATTCATAGAGGTCTGATGGCTCTTGCTGATGTGGAGGGTGCACGAATTCATCTGAAGCAGTTGACAATTGCACATCAAATTGCTAGCTTGGAGTCTCTACAAGAGATCCTTATGAGGCATTATACTCGGCAACTTCTTCATGAGATGTATAAGGTTTTTGGTTCAGCTGGTGTAATTGGCAATCCCATGGGATTTGCAAGGAGTTTAGGGCTTGGCATTAGAGACTTCTTGTCAGTTCCTGCCAGAAGCATTTTTCAGAGCCCTACTGGATTAATTACTGGCATGGCACAAGGCACGACTAGTCTCCTAAGTAATACTGTCTATGCTATAAGTGATGCTGCCACCCAATTCAGCAAAGCTGCACACAAGGGAATTGTGGCATTTACATTTGATGACCAGGCTGTTTCAGGGGTGCAACAGCAACAGACTGGTATAGCATCTCACTCTAAAGGTGTTATCAATGAAGTATTTGAGGGACTCACAGGTCTTCTTCAATCACCAATCAATGGAGCTGAGAAACATGGTCTTCCTGGTGTGCTCTCGGGCATAGCTTTAGGTATTACAGGACTTGTGGCCAAACCAGCTGCTAGTATTCTTGAAGTTACAGGAAAAACTGCACAGAGCATTAGAAACCGAAGTAGGATCTATCAGACAGGACAACAGCGCTTTAGAGTCCGTCTTCCAAGGCCTCTAAGCCGAGAATATCCCTTAAGACCTTACTGTTGGGAAGAAGCTGTTGGAGCATCAGTACTTGTTGAGGCAGATGATAGTTTGAGGCTCAAGGATGAAATTTTTGTTATGTGCAAGAAACTTAAAGAAGCTGGTAAATTTGTCATCATCACAGAGAGACTGGTTTTGATTGTAAGCTGCTCGAGTTTGGTGGACTTGGATAAGCCTGAATTTCGTGGTGTTCCTTCTGATCTCAAATGGGTGATTGAATCAGAAATTCATTTGGAGAGTGCGATGCATGCTGACTGCGATCAAGGAGTAGTTCATATAGTCGGCAGCAGCTCTAATACGCCTTTGCGTCAAAACCAGCTAGCCAAAAGAAGCAGTGGAACAAGGGCGGTGCGTTGGAATAATCCTACTGTTCCCCTCATTCAGACCAACTTGGAACTAGAACACAAAGAAGATGCGGAGAACTTGTTACAGGTTTTATTGTCTACAATTGAACTGGGAAAAGACCAAGGTTGGGGTTGTAGGAATATTCTGCACCGAAGTAATATCAAATAG

Protein Analysis

3439

Amino Acids

385.11

Weight (kDa)

5.86

Isoelectric Point (pI)

47.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS13_N PF12624 1 - 729 1.9e-74 VPS13-like family N-terminal region
VPS13_M PF25033 1754 - 1850 4.7e-08 VPS13-like family middle region
VPS13_VAB PF25036 2017 - 2306 7.5e-09 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_VAB PF25036 2416 - 2677 1.6e-23 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_C PF25037 3254 - 3323 1.3e-08 Intermembrane lipid transfer protein VPS13, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 6279, 7590, 7692
AasI GACNNNNNNGTC 2 cut(s) 3698, 9570
AatII GACGTC 1 cut(s) 7821
AbsI CCTCGAGG 1 cut(s) 1718
Acc16I TGCGCA 2 cut(s) 990, 1447
Acc36I ACCTGC 1 cut(s) 6300
Acc65I GGTACC 1 cut(s) 8056
AccB1I GGYRCC 1 cut(s) 8056
AccB7I CCANNNNNTGG 4 cut(s) 2578, 7427, 7517, 9593
AccBSI CCGCTC 1 cut(s) 6895
AccI GTMKAC 3 cut(s) 1882, 8248, 10250
AccII CGCG 1 cut(s) 3495
AcoI YGGCCR 7 cut(s) 357, 577, 1501, 3639, 6216, 8539, 9660
AcuI CTGAAG 7 cut(s) 3390, 3812, 4235, 5178, 6965, 7164, 9161
AcyI GRCGYC 2 cut(s) 6241, 7818
AdeI CACNNNGTG 3 cut(s) 740, 5374, 7427
AfeI AGCGCT 1 cut(s) 9752
AflII CTTAAG 4 cut(s) 4133, 4444, 8683, 9796
AflIII ACRYGT 2 cut(s) 893, 3547
AhdI GACNNNNNGTC 1 cut(s) 9316
AhlI ACTAGT 2 cut(s) 3302, 9386
AjuI GAANNNNNNNTTGG 8 cut(s) 3579, 3611, 6238, 6270, 7827, 7859, 9807, 9839
AleI CACNNNNGTG 2 cut(s) 1583, 7751
Alw21I GWGCWC 6 cut(s) 2395, 2966, 4733, 8941, 9130, 9627
Alw44I GTGCAC 1 cut(s) 9126
AlwNI CAGNNNCTG 2 cut(s) 7505, 9326
Ama87I CYCGRG 4 cut(s) 1718, 3152, 9628, 9958
Aor51HI AGCGCT 1 cut(s) 9752
ApaI GGGCCC 1 cut(s) 3512
ApaLI GTGCAC 1 cut(s) 9126
ArsI GACNNNNNNTTYG 3 cut(s) 32, 4769, 4801
AseI ATTAAT 5 cut(s) 3413, 4308, 5712, 6074, 9359
Asp700I GAANNNNTTC 5 cut(s) 2096, 4742, 6427, 6978, 7060
Asp718I GGTACC 1 cut(s) 8056
AspA2I CCTAGG 2 cut(s) 3392, 4030
AspLEI GCGC 3 cut(s) 991, 1448, 9753
AsuC2I CCSGG 2 cut(s) 550, 6586
AsuII TTCGAA 2 cut(s) 6, 6104
AsuNHI GCTAGC 2 cut(s) 9170, 10126
AvaI CYCGRG 4 cut(s) 1718, 3152, 9628, 9958
AvaII GGWCC 9 cut(s) 226, 1843, 3048, 3396, 3901, 4869, 5258, 6791, 8191
AvrII CCTAGG 2 cut(s) 3392, 4030
AxyI CCTNAGG 2 cut(s) 4140, 8367
BaeGI GKGCMC 3 cut(s) 3512, 3789, 9130
BalI TGGCCA 5 cut(s) 359, 1503, 3641, 8541, 9662
BanI GGYRCC 1 cut(s) 8056
BanII GRGCYC 5 cut(s) 2966, 3512, 4733, 8941, 9350
BarI GAAGNNNNNNTAC 8 cut(s) 2313, 2345, 2632, 2664, 4569, 4601, 4602, 4634
BbsI GAAGAC 6 cut(s) 247, 7152, 8977, 9566, 9605, 9758
Bbv12I GWGCWC 6 cut(s) 2395, 2966, 4733, 8941, 9130, 9627
BceAI ACGGC 1 cut(s) 49
BcgI CGANNNNNNTGC 4 cut(s) 3370, 3404, 9194, 9228
BciVI GTATCC 3 cut(s) 2994, 6527, 7651
BclI TGATCA 8 cut(s) 1120, 2755, 4110, 4147, 5089, 5547, 6967, 8352
BcnI CCSGG 2 cut(s) 550, 6586
BcuI ACTAGT 2 cut(s) 3302, 9386
BfmI CTRYAG 6 cut(s) 345, 1209, 1566, 1687, 4200, 7915
BfoI RGCGCY 1 cut(s) 9754
BfrI CTTAAG 4 cut(s) 4133, 4444, 8683, 9796
BfuAI ACCTGC 1 cut(s) 6300
BfuI GTATCC 3 cut(s) 2994, 6527, 7651
BglI GCCNNNNNGGC 2 cut(s) 7705, 8739
BglII AGATCT 2 cut(s) 2149, 6165
BlnI CCTAGG 2 cut(s) 3392, 4030
BlpI GCTNAGC 3 cut(s) 4267, 5231, 5622
BmcAI AGTACT 4 cut(s) 803, 1141, 6978, 9837
Bme18I GGWCC 9 cut(s) 226, 1843, 3048, 3396, 3901, 4869, 5258, 6791, 8191
BmeRI GACNNNNNGTC 1 cut(s) 9316
BmeT110I CYCGRG 4 cut(s) 1718, 3152, 9628, 9958
BmrI ACTGGG 3 cut(s) 3054, 7911, 10271
BmtI GCTAGC 2 cut(s) 9174, 10130
BmuI ACTGGG 3 cut(s) 3054, 7911, 10271
BoxI GACNNNNGTC 2 cut(s) 1320, 1888
BpiI GAAGAC 6 cut(s) 247, 7152, 8977, 9566, 9605, 9758
BplI GAGNNNNNCTC 2 cut(s) 8863, 8895
BpmI CTGGAG 7 cut(s) 134, 952, 1323, 2522, 4976, 6286, 6855
Bpu10I CCTNAGC 4 cut(s) 417, 5210, 7946, 9026
Bpu1102I GCTNAGC 3 cut(s) 4267, 5231, 5622
Bpu14I TTCGAA 2 cut(s) 6, 6104
BpuEI CTTGAG 7 cut(s) 62, 544, 6308, 7051, 7734, 8726, 9851
BpuMI CCSGG 2 cut(s) 550, 6586
Bsa29I ATCGAT 2 cut(s) 2351, 5787
BsaAI YACGTR 3 cut(s) 2133, 3548, 6701
BsaBI GATNNNNATC 5 cut(s) 194, 3327, 5469, 6258, 8342
BsaHI GRCGYC 2 cut(s) 6241, 7818
BsaI GGTCTC 2 cut(s) 3015, 3523
BsaWI WCCGGW 1 cut(s) 8113
Bse21I CCTNAGG 2 cut(s) 4140, 8367
Bse3DI GCAATG 6 cut(s) 2370, 4872, 7570, 7715, 8153, 8456
Bse8I GATNNNNATC 5 cut(s) 194, 3327, 5469, 6258, 8342
BseCI ATCGAT 2 cut(s) 2351, 5787
BseJI GATNNNNATC 5 cut(s) 194, 3327, 5469, 6258, 8342
BseMI GCAATG 6 cut(s) 2370, 4872, 7570, 7715, 8153, 8456
BseSI GKGCMC 3 cut(s) 3512, 3789, 9130
BseYI CCCAGC 4 cut(s) 392, 2368, 3241, 7517
BsgI GTGCAG 9 cut(s) 4909, 5469, 6077, 7491, 7518, 8789, 9432, 9687, 10283
Bsh1236I CGCG 1 cut(s) 3495
Bsh1285I CGRYCG 1 cut(s) 46
BshNI GGYRCC 1 cut(s) 8056
BshVI ATCGAT 2 cut(s) 2351, 5787
BsiEI CGRYCG 1 cut(s) 46
BsiHKAI GWGCWC 6 cut(s) 2395, 2966, 4733, 8941, 9130, 9627
BsiHKCI CYCGRG 4 cut(s) 1718, 3152, 9628, 9958
BsiSI CCGG 5 cut(s) 549, 2893, 4691, 6586, 8114
BsmBI CGTCTC 2 cut(s) 7825, 8048
BsmI GAATGC 3 cut(s) 2618, 2719, 5118
Bso31I GGTCTC 2 cut(s) 3015, 3523
BsoBI CYCGRG 4 cut(s) 1718, 3152, 9628, 9958
Bsp119I TTCGAA 2 cut(s) 6, 6104
Bsp120I GGGCCC 1 cut(s) 3508
Bsp1286I GDGCHC 9 cut(s) 2395, 2966, 3512, 3789, 4733, 8941, 9130, 9350, 9627
Bsp1407I TGTACA 3 cut(s) 890, 3842, 5140
Bsp1720I GCTNAGC 3 cut(s) 4267, 5231, 5622
Bsp19I CCATGG 5 cut(s) 206, 3705, 6001, 9044, 9273
BspDI ATCGAT 2 cut(s) 2351, 5787
BspFNI CGCG 1 cut(s) 3495
BspHI TCATGA 5 cut(s) 3355, 4107, 7156, 8223, 9226
BspMAI CTGCAG 3 cut(s) 349, 1213, 1570
BspMI ACCTGC 1 cut(s) 6300
BspOI GCTAGC 2 cut(s) 9174, 10130
BspQI GCTCTTC 1 cut(s) 6902
BspT104I TTCGAA 2 cut(s) 6, 6104
BspT107I GGYRCC 1 cut(s) 8056
BspTI CTTAAG 4 cut(s) 4133, 4444, 8683, 9796
BspTNI GGTCTC 2 cut(s) 3015, 3523
BsrBI CCGCTC 1 cut(s) 6895
BsrDI GCAATG 6 cut(s) 2370, 4872, 7570, 7715, 8153, 8456
BsrGI TGTACA 3 cut(s) 890, 3842, 5140
BssNI GRCGYC 2 cut(s) 6241, 7818
Bst6I CTCTTC 8 cut(s) 279, 562, 1013, 1249, 2028, 3409, 6902, 7276
BstACI GRCGYC 2 cut(s) 6241, 7818
BstAFI CTTAAG 4 cut(s) 4133, 4444, 8683, 9796
BstAPI GCANNNNNTGC 3 cut(s) 7505, 7514, 7569
BstAUI TGTACA 3 cut(s) 890, 3842, 5140
BstBAI YACGTR 3 cut(s) 2133, 3548, 6701
BstBI TTCGAA 2 cut(s) 6, 6104
BstDSI CCRYGG 8 cut(s) 206, 1261, 3705, 3789, 6001, 7824, 9044, 9273
BstEII GGTNACC 2 cut(s) 3119, 5339
BstFNI CGCG 1 cut(s) 3495
BstH2I RGCGCY 1 cut(s) 9754
BstHHI GCGC 3 cut(s) 991, 1448, 9753
BstMCI CGRYCG 1 cut(s) 46
BstNSI RCATGY 9 cut(s) 495, 897, 3584, 3611, 5069, 7296, 7300, 7572, 10058
BstPAI GACNNNNGTC 2 cut(s) 1320, 1888
BstPI GGTNACC 2 cut(s) 3119, 5339
BstSFI CTRYAG 6 cut(s) 345, 1209, 1566, 1687, 4200, 7915
BstSLI GKGCMC 3 cut(s) 3512, 3789, 9130
BstUI CGCG 1 cut(s) 3495
BstV2I GAAGAC 6 cut(s) 247, 7152, 8977, 9566, 9605, 9758
BstXI CCANNNNNNTGG 2 cut(s) 6124, 6668
Bsu15I ATCGAT 2 cut(s) 2351, 5787
Bsu36I CCTNAGG 2 cut(s) 4140, 8367
BsuI GTATCC 3 cut(s) 2994, 6527, 7651
BsuTUI ATCGAT 2 cut(s) 2351, 5787
BtgI CCRYGG 8 cut(s) 206, 1261, 3705, 3789, 6001, 7824, 9044, 9273
BtgZI GCGATG 3 cut(s) 5250, 5658, 10064
BtsI GCAGTG 5 cut(s) 1481, 2872, 6200, 6558, 10147
BveI ACCTGC 1 cut(s) 6300
CaiI CAGNNNCTG 2 cut(s) 7505, 9326
CciI TCATGA 5 cut(s) 3355, 4107, 7156, 8223, 9226
CfoI GCGC 3 cut(s) 991, 1448, 9753
ClaI ATCGAT 2 cut(s) 2351, 5787
CseI GACGC 3 cut(s) 2125, 6230, 10103
CsiI ACCWGGT 2 cut(s) 5761, 8059
CspCI CAANNNNNGTGG 6 cut(s) 463, 498, 1983, 2018, 3316, 3351
DraI TTTAAA 6 cut(s) 1815, 3540, 3939, 6435, 6676, 7257
DraIII CACNNNGTG 3 cut(s) 740, 5374, 7427
DrdI GACNNNNNNGTC 2 cut(s) 3698, 9570
DriI GACNNNNNGTC 1 cut(s) 9316
DseDI GACNNNNNNGTC 2 cut(s) 3698, 9570
EaeI YGGCCR 7 cut(s) 357, 577, 1501, 3639, 6216, 8539, 9660
Eam1104I CTCTTC 8 cut(s) 279, 562, 1013, 1249, 2028, 3409, 6902, 7276
Eam1105I GACNNNNNGTC 1 cut(s) 9316
EarI CTCTTC 8 cut(s) 279, 562, 1013, 1249, 2028, 3409, 6902, 7276
Ecl136II GAGCTC 3 cut(s) 2964, 4731, 8939
Eco147I AGGCCT 2 cut(s) 1645, 9775
Eco24I GRGCYC 5 cut(s) 2966, 3512, 4733, 8941, 9350
Eco31I GGTCTC 2 cut(s) 3015, 3523
Eco32I GATATC 3 cut(s) 4183, 5016, 5467
Eco47I GGWCC 9 cut(s) 226, 1843, 3048, 3396, 3901, 4869, 5258, 6791, 8191
Eco47III AGCGCT 1 cut(s) 9752
Eco53kI GAGCTC 3 cut(s) 2964, 4731, 8939
Eco57I CTGAAG 7 cut(s) 3390, 3812, 4235, 5178, 6965, 7164, 9161
Eco81I CCTNAGG 2 cut(s) 4140, 8367
Eco88I CYCGRG 4 cut(s) 1718, 3152, 9628, 9958
Eco91I GGTNACC 2 cut(s) 3119, 5339
EcoICRI GAGCTC 3 cut(s) 2964, 4731, 8939
EcoO109I RGGNCCY 8 cut(s) 226, 1843, 3048, 3508, 3509, 3901, 5165, 8191
EcoO65I GGTNACC 2 cut(s) 3119, 5339
EcoRI GAATTC 2 cut(s) 6106, 9132
EcoRV GATATC 3 cut(s) 4183, 5016, 5467
EcoT22I ATGCAT 7 cut(s) 3371, 5067, 6669, 6829, 7298, 7570, 10056
EcoT38I GRGCYC 5 cut(s) 2966, 3512, 4733, 8941, 9350
Esp3I CGTCTC 2 cut(s) 7825, 8048
FauI CCCGC 1 cut(s) 804
FauNDI CATATG 3 cut(s) 2884, 5632, 6663
FbaI TGATCA 8 cut(s) 1120, 2755, 4110, 4147, 5089, 5547, 6967, 8352
FblI GTMKAC 3 cut(s) 1882, 8248, 10250
FriOI GRGCYC 5 cut(s) 2966, 3512, 4733, 8941, 9350
FspAI RTGCGCAY 1 cut(s) 1447
FspI TGCGCA 2 cut(s) 990, 1447
GlaI GCGC 3 cut(s) 990, 1447, 9752
GsaI CCCAGC 4 cut(s) 396, 2372, 3245, 7521
GsuI CTGGAG 7 cut(s) 134, 952, 1323, 2522, 4976, 6286, 6855
HaeII RGCGCY 1 cut(s) 9754
HapII CCGG 5 cut(s) 549, 2893, 4691, 6586, 8114
HgaI GACGC 3 cut(s) 2125, 6230, 10103
HhaI GCGC 3 cut(s) 991, 1448, 9753
Hin1I GRCGYC 2 cut(s) 6241, 7818
Hin6I GCGC 3 cut(s) 989, 1446, 9751
HinP1I GCGC 3 cut(s) 989, 1446, 9751
HincII GTYRAC 8 cut(s) 586, 766, 1084, 1883, 4648, 7242, 9021, 9150
HindII GTYRAC 8 cut(s) 586, 766, 1084, 1883, 4648, 7242, 9021, 9150
HindIII AAGCTT 4 cut(s) 2787, 3270, 8680, 9028
HpaI GTTAAC 2 cut(s) 586, 1084
HpaII CCGG 5 cut(s) 549, 2893, 4691, 6586, 8114
Hpy99I CGWCG 1 cut(s) 122
Hsp92I GRCGYC 2 cut(s) 6241, 7818
HspAI GCGC 3 cut(s) 989, 1446, 9751
KflI GGGWCCC 2 cut(s) 226, 3901
KpnI GGTACC 1 cut(s) 8060
Ksp22I TGATCA 8 cut(s) 1120, 2755, 4110, 4147, 5089, 5547, 6967, 8352
KspAI GTTAAC 2 cut(s) 586, 1084
LguI GCTCTTC 1 cut(s) 6902
MabI ACCWGGT 2 cut(s) 5761, 8059
MbiI CCGCTC 1 cut(s) 6895
MfeI CAATTG 8 cut(s) 1128, 2399, 2576, 6246, 7619, 8931, 9153, 10254
MhlI GDGCHC 9 cut(s) 2395, 2966, 3512, 3789, 4733, 8941, 9130, 9350, 9627
MlsI TGGCCA 5 cut(s) 359, 1503, 3641, 8541, 9662
MluNI TGGCCA 5 cut(s) 359, 1503, 3641, 8541, 9662
Mox20I TGGCCA 5 cut(s) 359, 1503, 3641, 8541, 9662
Mph1103I ATGCAT 7 cut(s) 3371, 5067, 6669, 6829, 7298, 7570, 10056
MroXI GAANNNNTTC 5 cut(s) 2096, 4742, 6427, 6978, 7060
MscI TGGCCA 5 cut(s) 359, 1503, 3641, 8541, 9662
Msp20I TGGCCA 5 cut(s) 359, 1503, 3641, 8541, 9662
MspA1I CMGCKG 8 cut(s) 815, 2118, 5483, 6061, 6646, 8537, 9254, 9671
MspCI CTTAAG 4 cut(s) 4133, 4444, 8683, 9796
MspI CCGG 5 cut(s) 549, 2893, 4691, 6586, 8114
MunI CAATTG 8 cut(s) 1128, 2399, 2576, 6246, 7619, 8931, 9153, 10254
Mva1269I GAATGC 3 cut(s) 2618, 2719, 5118
MvnI CGCG 1 cut(s) 3495
NciI CCSGG 2 cut(s) 550, 6586
NcoI CCATGG 5 cut(s) 206, 3705, 6001, 9044, 9273
NdeI CATATG 3 cut(s) 2884, 5632, 6663
NheI GCTAGC 2 cut(s) 9170, 10126
NmeAIII GCCGAG 3 cut(s) 467, 9193, 9809
NsbI TGCGCA 2 cut(s) 990, 1447
NsiI ATGCAT 7 cut(s) 3371, 5067, 6669, 6829, 7298, 7570, 10056
NspI RCATGY 9 cut(s) 495, 897, 3584, 3611, 5069, 7296, 7300, 7572, 10058
NspV TTCGAA 2 cut(s) 6, 6104
OliI CACNNNNGTG 2 cut(s) 1583, 7751
PaeI GCATGC 3 cut(s) 7296, 7572, 10058
PaeR7I CTCGAG 2 cut(s) 1718, 9958
PagI TCATGA 5 cut(s) 3355, 4107, 7156, 8223, 9226
PceI AGGCCT 2 cut(s) 1645, 9775
PciI ACATGT 1 cut(s) 893
PciSI GCTCTTC 1 cut(s) 6902
PcsI WCGNNNNNNNCGW 2 cut(s) 12, 48
PctI GAATGC 3 cut(s) 2618, 2719, 5118
PdmI GAANNNNTTC 5 cut(s) 2096, 4742, 6427, 6978, 7060
PflMI CCANNNNNTGG 4 cut(s) 2578, 7427, 7517, 9593
Ppu21I YACGTR 3 cut(s) 2133, 3548, 6701
PpuMI RGGWCCY 5 cut(s) 226, 1843, 3048, 3901, 8191
PscI ACATGT 1 cut(s) 893
PshAI GACNNNNGTC 2 cut(s) 1320, 1888
PshBI ATTAAT 5 cut(s) 3413, 4308, 5712, 6074, 9359
PsiI TTATAA 3 cut(s) 6279, 7590, 7692
Psp124BI GAGCTC 3 cut(s) 2966, 4733, 8941
Psp5II RGGWCCY 5 cut(s) 226, 1843, 3048, 3901, 8191
PspEI GGTNACC 2 cut(s) 3119, 5339
PspFI CCCAGC 4 cut(s) 392, 2368, 3241, 7517
PspOMI GGGCCC 1 cut(s) 3508
PspPPI RGGWCCY 5 cut(s) 226, 1843, 3048, 3901, 8191
PspXI VCTCGAGB 2 cut(s) 1718, 9958
PstI CTGCAG 3 cut(s) 349, 1213, 1570
PstNI CAGNNNCTG 2 cut(s) 7505, 9326
PvuII CAGCTG 6 cut(s) 2118, 5483, 6646, 8537, 9254, 9671
SacI GAGCTC 3 cut(s) 2966, 4733, 8941
SalI GTCGAC 1 cut(s) 1881
SapI GCTCTTC 1 cut(s) 6902
ScaI AGTACT 4 cut(s) 803, 1141, 6978, 9837
SduI GDGCHC 9 cut(s) 2395, 2966, 3512, 3789, 4733, 8941, 9130, 9350, 9627
SexAI ACCWGGT 2 cut(s) 5761, 8059
SfcI CTRYAG 6 cut(s) 345, 1209, 1566, 1687, 4200, 7915
Sfr274I CTCGAG 2 cut(s) 1718, 9958
SfuI TTCGAA 2 cut(s) 6, 6104
SinI GGWCC 9 cut(s) 226, 1843, 3048, 3396, 3901, 4869, 5258, 6791, 8191
SlaI CTCGAG 2 cut(s) 1718, 9958
SpeI ACTAGT 2 cut(s) 3302, 9386
SphI GCATGC 3 cut(s) 7296, 7572, 10058
SseBI AGGCCT 2 cut(s) 1645, 9775
SspI AATATT 7 cut(s) 499, 2125, 2292, 6465, 6711, 8359, 10294
SstI GAGCTC 3 cut(s) 2966, 4733, 8941
StuI AGGCCT 2 cut(s) 1645, 9775
TaqII GACCGA 4 cut(s) 32, 751, 3505, 4794
TatI WGTACW 9 cut(s) 801, 890, 1139, 3842, 5140, 5656, 6976, 8520, 9835
TauI GCSGC 2 cut(s) 579, 7472
Van91I CCANNNNNTGG 4 cut(s) 2578, 7427, 7517, 9593
Vha464I CTTAAG 4 cut(s) 4133, 4444, 8683, 9796
VneI GTGCAC 1 cut(s) 9126
VpaK11BI GGWCC 9 cut(s) 226, 1843, 3048, 3396, 3901, 4869, 5258, 6791, 8191
VspI ATTAAT 5 cut(s) 3413, 4308, 5712, 6074, 9359
XceI RCATGY 9 cut(s) 495, 897, 3584, 3611, 5069, 7296, 7300, 7572, 10058
XcmI CCANNNNNNNNNTGG 3 cut(s) 2497, 5861, 7392
XhoI CTCGAG 2 cut(s) 1718, 9958
XmaJI CCTAGG 2 cut(s) 3392, 4030
XmiI GTMKAC 3 cut(s) 1882, 8248, 10250
XmnI GAANNNNTTC 5 cut(s) 2096, 4742, 6427, 6978, 7060
ZraI GACGTC 1 cut(s) 7819
ZrmI AGTACT 4 cut(s) 803, 1141, 6978, 9837
Zsp2I ATGCAT 7 cut(s) 3371, 5067, 6669, 6829, 7298, 7570, 10056
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.