Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0001657

Physical Location & Seq

Genomic Coordinates Reverse (-)

14220472 .. 14224470

Gene Structure 3999 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1170300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGAACCATGCTATCCACATCGGCTCACCGTGGAGGACATTGCATTTATCCATCCATGCTGAGGGAGCAACTAAGGAATTGATTTTTGCTTGTGCAAAGAACATTACAATTGATCTCATACAAAGTTTCGATCAACAAAAGCTTTCCTTCCAAATCACACCATTGCAAATTGATAACCAGCTGAGTTGTACACCATATCCTGTCATCTTGTCCCTTGACCGTGATTATAAAAGCAATCCATTTGGCCATTTGATTAAGGATGACGTCATGAAACCAAGAAGTGAAAGACTGCTTCAAAGGACTTCTCACAGATCTTTTGAACCTGTTTTCTACCTTGCTGTATCAAAATGGAGGAAAAAAGATGTTTCATTGGTTTCATTCGAATATATCAGCTTAAGGTGTTTAATGGATTCCTATGCAACAGAGAAACAACTTCACTTAATGACTGCTCCTGTTTCTAGTGAAAGCCACAAACCCAGACTCTCTCTACCTTCAATACTTCCAATTGGAGCTTCATGGCAGCAAATTTACCTTTTGGCTAGAAGACAGAAAAAGATCTATGTCCAAGTGTTTGATTTTGGCCCCATCAACTTGACCTTAAGCTTTTCCAGTGCTCCATGGATGCTTCGAAATCGGATTCTTACCGCAGGAGAATCTGTTATCCATAGAGGTCTTACGGCTCTTGCTGATGTTGAGGGTGCACGAATTCATCTCAAGCAGTTGACAATTACACATCAAATTGCTAGTTTAGAGTCCCTTCAAGAGATCCTTGTAAGGCATTATACTCGGCAACTTCTTCATGAGATGTACAAGGTGTTTGGTTCTGCTGGTGTTATAGGCAATCCCTTGGGATTCACAAGGAGTATGGGGCTTGGCATTAGAGATTTCTTGTCAGTGCCTGCTAGGAGCATTTTTCTGGGCATTGTGGCATTTACATTTGATGACCAGGCTGTTTCAGAAGTGGAACAGCAGCAGAGTGGTATTGCTACTCACTCTAAAGGTGTGATAAATGGAGTATTTGAGGGACTCACAGGTCTTCTTCAATCACCAATTAAAGGAGCTGAGAAACATGGCCTTCCTGGTGTCCTGTCAGGCATAGCTTTAGGTATTACAGGACTAGTGGCAAAACGGGCTGCTAGTATTCTTGAAAGTATTCTTGAAGTTACTGGAAAAACTGCAGAGAGTATCAGAAATCGGAGTAGGCTCTATCAAATGGGACAACAGCGCTTTAGAGTCCGTCTTCCAAGGCCTCTAAGCAGGGAACTCCCCGTAAGACCTTATTCTTGGGAAGATGCTGTTGGAACTTCAGCTCTTGTTGAGGCAGATGACAGTCTGAGGCTCAAGGATGAGATTTTAGTCATGTGCAAGGAACTTAGACAAGCTGGTAAATTTGTCATCGTTACACAGAGGCTTGTATTGATTGCTAGCTGCTCAAATCTGGTGGACTTAGGCAAGCCTGAATTTCGGGGTGTTCCTGCTGACCTTCACTGGGAAATTGAATCAGAAATCCGTTTGGAGAGTGTTACACATGCTGACTGTGATGAAGGAGTAGTGCATATAGTCGGAAGCAGTTCAGATGCCCCTTTGCGGCAAAACCAGAAAGCTAAAAGAAGCAGTGGAGCAAGGGCAGTTCGTTGGAGCAATCCTACTGGCTCACAAAGAAGATGCGTACAATTTGTTGCAGATTTTGTTTTCTGCAATAGAATTAGGAAAGTAGCATGGGTGGGGATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0006810 GO:0006914 GO:0006996 GO:0007033 GO:0007034 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0016043 GO:0016192 GO:0016236 GO:0022607 GO:0030587 GO:0031154 GO:0032502 GO:0044085 GO:0044237 GO:0044248 GO:0045324 GO:0046907 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051703 GO:0051704 GO:0061919 GO:0070925 GO:0071840 GO:0090702 GO:0099120 GO:1905037

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Chorein_N SHR-BD VPS13 VPS13_C VPS13_mid_rpt

Protein Analysis

578

Amino Acids

64.5

Weight (kDa)

9.48

Isoelectric Point (pI)

51.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VPS13_C	PF25037	412 - 481	3.5e-08	Intermembrane lipid transfer protein VPS13, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001657)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24740 AT5G24740 AT5G24740 AT5G24740 AT5G24740 AT5G24740
fragaria_vesca	FvH4_6g36300 FvH4_6g36300 FvH4_6g36300 FvH4_6g36300 FvH4_6g36300 FvH4_6g36300 FvH4_6g36300 FvH4_6g36300 FvH4_6g36300 FvH4_6g36300 FvH4_6g36300 FvH4_6g36300 FvH4_6g36300 FvH4_6g36300 FvH4_6g36300
malus_domestica	MD09G1170300.v1.1 MD17G1156800.v1.1
prunus_persica	Prupe.3G028500_v2.0.a1 Prupe.3G028500_v2.0.a1 Prupe.3G028500_v2.0.a1
pyrus_communis	pycom09g08790 pycom17g15020
rosa_chinensis	RchiOBHm_Chr2g0148301 RchiOBHm_Chr2g0148311 RchiOBHm_Chr5g0051461
rosa_laevigata	RLG00000020335
rosa_multiflora	Rmu_sc0004032.1_g000013 Rmu_sc0022189.1_g000006
rosa_roxburghii	Rroxscaffold_1G00027070 Rroxscaffold_2G00098910 Rroxscaffold_2G00098920
rosa_rugosa	Rorug02G0405600 Rorug05G0279200
rosa_samantha	Rh2AG464200 Rh2BG477200 Rh2CG450900 Rh2DG486000 Rh5AG350300 Rh5AG350400 Rh5BG362600 Rh5CG387200 Rh5DG377000
rosa_wichuraiana	Rw2G037840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	228
AasI	GACNNNNNNGTC	1 cut(s)	1032
AatII	GACGTC	1 cut(s)	267
AciI	CCGC	2 cut(s)	645, 1588
AclWI	GGATC	1 cut(s)	760
AcoI	YGGCCR	1 cut(s)	244
AcsI	RAATTY	4 cut(s)	525, 705, 1388, 1460
AcuI	CTGAAG	1 cut(s)	1290
AcyI	GRCGYC	1 cut(s)	264
AfaI	GTAC	3 cut(s)	190, 809, 1671
AfeI	AGCGCT	1 cut(s)	1226
AfiI	CCNNNNNNNGG	4 cut(s)	61, 1055, 1489, 1587
AflII	CTTAAG	2 cut(s)	394, 598
AgsI	TTSAA	8 cut(s)	296, 320, 495, 761, 1043, 1148, 1160, 1499
AhlI	ACTAGT	1 cut(s)	1117
AjnI	CCWGG	2 cut(s)	945, 1078
AjuI	GAANNNNNNNTTGG	4 cut(s)	496, 528, 1281, 1313
Alw21I	GWGCWC	2 cut(s)	616, 703
Alw44I	GTGCAC	1 cut(s)	699
AlwI	GGATC	1 cut(s)	760
AlwNI	CAGNNNCTG	1 cut(s)	899
Aor51HI	AGCGCT	1 cut(s)	1226
AoxI	GGCC	4 cut(s)	244, 580, 1072, 1247
ApaLI	GTGCAC	1 cut(s)	699
ApeKI	GCWGC	4 cut(s)	520, 970, 1133, 1428
ApoI	RAATTY	4 cut(s)	525, 705, 1388, 1460
Asp700I	GAANNNNTTC	2 cut(s)	1152, 1570
AspLEI	GCGC	1 cut(s)	1227
AspS9I	GGNCC	1 cut(s)	581
AsuHPI	GGTGA	2 cut(s)	18, 1038
AsuII	TTCGAA	2 cut(s)	381, 628
AsuNHI	GCTAGC	1 cut(s)	1424
BaeGI	GKGCMC	1 cut(s)	703
BalI	TGGCCA	1 cut(s)	246
BbsI	GAAGAC	3 cut(s)	550, 1028, 1232
Bbv12I	GWGCWC	2 cut(s)	616, 703
BbvCI	CCTCAGC	1 cut(s)	60
BbvI	GCAGC	4 cut(s)	532, 982, 1120, 1415
BccI	CCATC	2 cut(s)	59, 593
BceAI	ACGGC	1 cut(s)	693
BcgI	CGANNNNNNTGC	2 cut(s)	767, 801
BciT130I	CCWGG	2 cut(s)	947, 1080
BcuI	ACTAGT	1 cut(s)	1117
BfaI	CTAG	7 cut(s)	459, 540, 744, 903, 1118, 1137, 1425
BfmI	CTRYAG	1 cut(s)	1176
BfoI	RGCGCY	1 cut(s)	1228
BfrI	CTTAAG	2 cut(s)	394, 598
BglII	AGATCT	2 cut(s)	311, 555
BisI	GCNGC	5 cut(s)	521, 971, 1134, 1429, 1589
BlsI	GCNGC	5 cut(s)	522, 972, 1135, 1430, 1590
Bme1390I	CCNGG	2 cut(s)	947, 1080
BmgT120I	GGNCC	1 cut(s)	581
BmiI	GGNNCC	1 cut(s)	583
BmrFI	CCNGG	2 cut(s)	947, 1080
BmrI	ACTGGG	1 cut(s)	1498
BmsI	GCATC	4 cut(s)	612, 1282, 1567, 1655
BmtI	GCTAGC	1 cut(s)	1428
BmuI	ACTGGG	1 cut(s)	1498
BpiI	GAAGAC	3 cut(s)	550, 1028, 1232
Bpu10I	CCTNAGC	1 cut(s)	60
Bpu14I	TTCGAA	2 cut(s)	381, 628
BpuEI	CTTGAG	2 cut(s)	698, 1325
BsaHI	GRCGYC	1 cut(s)	264
BsaJI	CCNNGG	4 cut(s)	29, 617, 846, 1244
BsaXI	ACNNNNNCTCC	2 cut(s)	642, 672
Bsc4I	CCNNNNNNNGG	4 cut(s)	61, 1055, 1489, 1587
Bse1I	ACTGG	4 cut(s)	609, 1171, 1493, 1654
Bse3DI	GCAATG	2 cut(s)	38, 161
BseBI	CCWGG	2 cut(s)	947, 1080
BseDI	CCNNGG	4 cut(s)	29, 617, 846, 1244
BseGI	GGATG	5 cut(s)	51, 265, 627, 1351, 1734
BseLI	CCNNNNNNNGG	4 cut(s)	61, 1055, 1489, 1587
BseMI	GCAATG	2 cut(s)	38, 161
BseMII	CTCAG	4 cut(s)	51, 173, 1053, 1325
BseNI	ACTGG	4 cut(s)	609, 1171, 1493, 1654
BseSI	GKGCMC	1 cut(s)	703
BseXI	GCAGC	4 cut(s)	532, 982, 1120, 1415
BshFI	GGCC	4 cut(s)	246, 582, 1074, 1249
BsiHKAI	GWGCWC	2 cut(s)	616, 703
BslFI	GGGAC	4 cut(s)	196, 739, 1038, 1230
BslI	CCNNNNNNNGG	4 cut(s)	61, 1055, 1489, 1587
BsmFI	GGGAC	4 cut(s)	196, 739, 1038, 1230
BsnI	GGCC	4 cut(s)	246, 582, 1074, 1249
Bsp119I	TTCGAA	2 cut(s)	381, 628
Bsp1286I	GDGCHC	2 cut(s)	616, 703
Bsp1407I	TGTACA	2 cut(s)	188, 807
Bsp143I	GATC	5 cut(s)	112, 130, 311, 555, 765
Bsp19I	CCATGG	1 cut(s)	617
BspACI	CCGC	2 cut(s)	645, 1588
BspANI	GGCC	4 cut(s)	246, 582, 1074, 1249
BspCNI	CTCAG	4 cut(s)	52, 174, 1054, 1326
BspHI	TCATGA	2 cut(s)	267, 799
BspLI	GGNNCC	1 cut(s)	583
BspMAI	CTGCAG	1 cut(s)	1180
BspOI	GCTAGC	1 cut(s)	1428
BspPI	GGATC	1 cut(s)	760
BspT104I	TTCGAA	2 cut(s)	381, 628
BspTI	CTTAAG	2 cut(s)	394, 598
BsrDI	GCAATG	2 cut(s)	38, 161
BsrGI	TGTACA	2 cut(s)	188, 807
BsrI	ACTGG	4 cut(s)	609, 1171, 1493, 1654
BssECI	CCNNGG	4 cut(s)	29, 617, 846, 1244
BssMI	GATC	5 cut(s)	112, 130, 311, 555, 765
BssNI	GRCGYC	1 cut(s)	264
BssT1I	CCWWGG	3 cut(s)	617, 846, 1244
Bst2UI	CCWGG	2 cut(s)	947, 1080
Bst4CI	ACNGT	4 cut(s)	30, 221, 1331, 1538
BstACI	GRCGYC	1 cut(s)	264
BstAFI	CTTAAG	2 cut(s)	394, 598
BstAUI	TGTACA	2 cut(s)	188, 807
BstBI	TTCGAA	2 cut(s)	381, 628
BstC8I	GCNNGC	3 cut(s)	900, 1426, 1454
BstDEI	CTNAG	8 cut(s)	60, 72, 182, 1062, 1253, 1334, 1373, 1447
BstDSI	CCRYGG	2 cut(s)	29, 617
BstF5I	GGATG	5 cut(s)	51, 265, 627, 1351, 1734
BstH2I	RGCGCY	1 cut(s)	1228
BstHHI	GCGC	1 cut(s)	1227
BstKTI	GATC	5 cut(s)	115, 133, 314, 558, 768
BstMBI	GATC	5 cut(s)	112, 130, 311, 555, 765
BstMWI	GCNNNNNNNGC	2 cut(s)	65, 1130
BstNI	CCWGG	2 cut(s)	947, 1080
BstNSI	RCATGY	1 cut(s)	1532
BstSCI	CCNGG	2 cut(s)	945, 1078
BstSFI	CTRYAG	1 cut(s)	1176
BstSLI	GKGCMC	1 cut(s)	703
BstV1I	GCAGC	4 cut(s)	532, 982, 1120, 1415
BstV2I	GAAGAC	3 cut(s)	550, 1028, 1232
BstX2I	RGATCY	3 cut(s)	311, 555, 765
BstYI	RGATCY	3 cut(s)	311, 555, 765
BsuRI	GGCC	4 cut(s)	246, 582, 1074, 1249
BtgI	CCRYGG	2 cut(s)	29, 617
BtsCI	GGATG	5 cut(s)	51, 265, 627, 1351, 1734
BtsI	GCAGTG	1 cut(s)	1621
BtsIMutI	CAGTG	4 cut(s)	616, 900, 1486, 1621
Cac8I	GCNNGC	3 cut(s)	900, 1426, 1454
CaiI	CAGNNNCTG	1 cut(s)	899
CciI	TCATGA	2 cut(s)	267, 799
CfoI	GCGC	1 cut(s)	1227
Cfr13I	GGNCC	1 cut(s)	581
Csp6I	GTAC	3 cut(s)	189, 808, 1670
CspCI	CAANNNNNGTGG	2 cut(s)	1422, 1457
CviQI	GTAC	3 cut(s)	189, 808, 1670
DdeI	CTNAG	8 cut(s)	60, 72, 182, 1062, 1253, 1334, 1373, 1447
DpnI	GATC	5 cut(s)	114, 132, 313, 557, 767
DpnII	GATC	5 cut(s)	112, 130, 311, 555, 765
DrdI	GACNNNNNNGTC	1 cut(s)	1032
DseDI	GACNNNNNNGTC	1 cut(s)	1032
EaeI	YGGCCR	1 cut(s)	244
Eco130I	CCWWGG	3 cut(s)	617, 846, 1244
Eco147I	AGGCCT	1 cut(s)	1249
Eco47III	AGCGCT	1 cut(s)	1226
Eco57I	CTGAAG	1 cut(s)	1290
EcoRI	GAATTC	1 cut(s)	705
EcoRII	CCWGG	2 cut(s)	945, 1078
EcoT14I	CCWWGG	3 cut(s)	617, 846, 1244
ErhI	CCWWGG	3 cut(s)	617, 846, 1244
FalI	AAGNNNNNCTT	4 cut(s)	131, 163, 753, 785
FaqI	GGGAC	4 cut(s)	196, 739, 1038, 1230
Fnu4HI	GCNGC	5 cut(s)	521, 971, 1134, 1429, 1589
FokI	GGATG	4 cut(s)	38, 272, 634, 1358
Fsp4HI	GCNGC	5 cut(s)	521, 971, 1134, 1429, 1589
FspBI	CTAG	7 cut(s)	459, 540, 744, 903, 1118, 1137, 1425
GlaI	GCGC	1 cut(s)	1226
GluI	GCNGC	5 cut(s)	521, 971, 1134, 1429, 1589
HaeII	RGCGCY	1 cut(s)	1228
HaeIII	GGCC	4 cut(s)	246, 582, 1074, 1249
HhaI	GCGC	1 cut(s)	1227
Hin1I	GRCGYC	1 cut(s)	264
Hin6I	GCGC	1 cut(s)	1225
HinP1I	GCGC	1 cut(s)	1225
HincII	GTYRAC	1 cut(s)	723
HindII	GTYRAC	1 cut(s)	723
HindIII	AAGCTT	2 cut(s)	140, 601
HinfI	GANTC	9 cut(s)	410, 480, 637, 653, 752, 852, 1026, 1233, 1499
HphI	GGTGA	2 cut(s)	18, 1038
Hpy166II	GTNNAC	4 cut(s)	191, 701, 723, 1444
Hpy188I	TCNGA	8 cut(s)	636, 958, 1190, 1197, 1335, 1504, 1565, 1576
Hpy188III	TCNNGA	5 cut(s)	268, 761, 800, 1145, 1157
Hpy8I	GTNNAC	4 cut(s)	191, 701, 723, 1444
HpyAV	CCTTC	6 cut(s)	157, 501, 767, 1085, 1493, 1538
HpyCH4III	ACNGT	4 cut(s)	30, 221, 1331, 1538
HpyCH4IV	ACGT	1 cut(s)	264
HpyF10VI	GCNNNNNNNGC	2 cut(s)	65, 1130
HpyF3I	CTNAG	8 cut(s)	60, 72, 182, 1062, 1253, 1334, 1373, 1447
HpySE526I	ACGT	1 cut(s)	264
Hsp92I	GRCGYC	1 cut(s)	264
HspAI	GCGC	1 cut(s)	1225
Kzo9I	GATC	5 cut(s)	112, 130, 311, 555, 765
LmnI	GCTCC	8 cut(s)	65, 454, 509, 619, 906, 1058, 1619, 1638
Lsp1109I	GCAGC	4 cut(s)	532, 982, 1120, 1415
LweI	GCATC	4 cut(s)	612, 1282, 1567, 1655
MaeI	CTAG	7 cut(s)	459, 540, 744, 903, 1118, 1137, 1425
MaeII	ACGT	1 cut(s)	264
MaeIII	GTNAC	3 cut(s)	1162, 1399, 1522
MalI	GATC	5 cut(s)	114, 132, 313, 557, 767
MboI	GATC	5 cut(s)	112, 130, 311, 555, 765
MboII	GAAGA	7 cut(s)	555, 788, 1028, 1031, 1232, 1301, 1674
MfeI	CAATTG	2 cut(s)	108, 504
MflI	RGATCY	3 cut(s)	311, 555, 765
MhlI	GDGCHC	2 cut(s)	616, 703
MlsI	TGGCCA	1 cut(s)	246
MluNI	TGGCCA	1 cut(s)	246
MlyI	GAGTC	4 cut(s)	474, 761, 1020, 1242
MmeI	TCCRAC	3 cut(s)	1279, 1543, 1616
Mox20I	TGGCCA	1 cut(s)	246
MroXI	GAANNNNTTC	2 cut(s)	1152, 1570
MscI	TGGCCA	1 cut(s)	246
MseI	TTAA	6 cut(s)	255, 395, 404, 440, 599, 1053
Msp20I	TGGCCA	1 cut(s)	246
MspA1I	CMGCKG	1 cut(s)	181
MspCI	CTTAAG	2 cut(s)	394, 598
MspR9I	CCNGG	2 cut(s)	947, 1080
MunI	CAATTG	2 cut(s)	108, 504
MvaI	CCWGG	2 cut(s)	947, 1080
MwoI	GCNNNNNNNGC	2 cut(s)	65, 1130
NcoI	CCATGG	1 cut(s)	617
NdeII	GATC	5 cut(s)	112, 130, 311, 555, 765
NheI	GCTAGC	1 cut(s)	1424
NlaIV	GGNNCC	1 cut(s)	583
NmeAIII	GCCGAG	1 cut(s)	766
NspI	RCATGY	1 cut(s)	1532
NspV	TTCGAA	2 cut(s)	381, 628
PagI	TCATGA	2 cut(s)	267, 799
PceI	AGGCCT	1 cut(s)	1249
PdmI	GAANNNNTTC	2 cut(s)	1152, 1570
PfeI	GAWTC	5 cut(s)	410, 637, 653, 852, 1499
PkrI	GCNGC	5 cut(s)	522, 972, 1135, 1430, 1590
PleI	GAGTC	4 cut(s)	474, 760, 1020, 1241
PpsI	GAGTC	4 cut(s)	474, 760, 1020, 1241
PsiI	TTATAA	1 cut(s)	228
Psp6I	CCWGG	2 cut(s)	945, 1078
PspGI	CCWGG	2 cut(s)	945, 1078
PspN4I	GGNNCC	1 cut(s)	583
PspPI	GGNCC	1 cut(s)	581
PstI	CTGCAG	1 cut(s)	1180
PstNI	CAGNNNCTG	1 cut(s)	899
PsuI	RGATCY	3 cut(s)	311, 555, 765
PvuII	CAGCTG	1 cut(s)	181
RsaI	GTAC	3 cut(s)	190, 809, 1671
RsaNI	GTAC	3 cut(s)	189, 808, 1670
SaqAI	TTAA	6 cut(s)	255, 395, 404, 440, 599, 1053
SatI	GCNGC	5 cut(s)	521, 971, 1134, 1429, 1589
Sau3AI	GATC	5 cut(s)	112, 130, 311, 555, 765
Sau96I	GGNCC	1 cut(s)	581
SchI	GAGTC	4 cut(s)	474, 761, 1020, 1242
ScrFI	CCNGG	2 cut(s)	947, 1080
SduI	GDGCHC	2 cut(s)	616, 703
SfaNI	GCATC	4 cut(s)	612, 1282, 1567, 1655
SfcI	CTRYAG	1 cut(s)	1176
SfuI	TTCGAA	2 cut(s)	381, 628
SmlI	CTYRAG	4 cut(s)	394, 598, 713, 1340
SmoI	CTYRAG	4 cut(s)	394, 598, 713, 1340
SpeI	ACTAGT	1 cut(s)	1117
SseBI	AGGCCT	1 cut(s)	1249
SsiI	CCGC	2 cut(s)	645, 1588
SspMI	CTAG	7 cut(s)	459, 540, 744, 903, 1118, 1137, 1425
StuI	AGGCCT	1 cut(s)	1249
StyD4I	CCNGG	2 cut(s)	945, 1078
StyI	CCWWGG	3 cut(s)	617, 846, 1244
TaaI	ACNGT	4 cut(s)	30, 221, 1331, 1538
TaiI	ACGT	1 cut(s)	267
TaqI	TCGA	3 cut(s)	129, 381, 628
TatI	WGTACW	2 cut(s)	188, 807
TauI	GCSGC	1 cut(s)	1591
TfiI	GAWTC	5 cut(s)	410, 637, 653, 852, 1499
Tru1I	TTAA	6 cut(s)	255, 395, 404, 440, 599, 1053
Tru9I	TTAA	6 cut(s)	255, 395, 404, 440, 599, 1053
TscAI	CASTG	4 cut(s)	616, 900, 1493, 1621
TseI	GCWGC	4 cut(s)	520, 970, 1133, 1428
TspDTI	ATGAA	8 cut(s)	17, 284, 357, 366, 504, 698, 788, 1557
TspGWI	ACGGA	2 cut(s)	1226, 1499
TspRI	CASTG	4 cut(s)	616, 900, 1493, 1621
Vha464I	CTTAAG	2 cut(s)	394, 598
VneI	GTGCAC	1 cut(s)	699
XapI	RAATTY	4 cut(s)	525, 705, 1388, 1460
XceI	RCATGY	1 cut(s)	1532
XmnI	GAANNNNTTC	2 cut(s)	1152, 1570
XspI	CTAG	7 cut(s)	459, 540, 744, 903, 1118, 1137, 1425
ZraI	GACGTC	1 cut(s)	265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.