AT5G37630

Nuclear condensing complex subunits, C-term domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0006579
Physical Location & Seq
Forward (+)
14947227 .. 14952806
5580 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G37630.1

Sequence Viewer

Length: 3156 bp
ATGGGCGAAGAATCAGAAATCGCCATGGCTTCAGCAGATCGAAATAACCTAACCCAGAAAATCGCCAAGATCCTAAACGAGACTCGCACATCATACGCTACTCATAACCGTAAGCTAAAGGAGCTCGCCACAATCCGTTCAAAACTATCTTCATCTGAATCCGAATCCGAGTCCGTGTCTTCTTCTATTCTTCAATTCTCTTCCGTGTTTCTCAAAACCCTAACCCCTCTTTTCATCGCGGCTCAACGAAGAACCGCTGCAGCAGAGCGTGTTGTTCGATTCGTGGCGGAATTCGCTTGTCTTCGTAGTAATTCAGACGGTGACTCCGATTGCGACGAGTTTCTAGAGGAATTTCTTAAGTTTTTGGTTGCTGGGTCTGTTGCTGCCAATAGAAACGCGAGATTCAGGGCGTGTCAGATAATTTCAGAGATCATATTGAGGCTGCCAGATGAAGTGGAAGTAGCGGATGAACTATGGGATGATGTAATTGATTGTATGATGTTGCGAGTTCGGGACAAAGTTCCTGTTATACGTACATTTGCTGTGAGGTCTCTTTCACGTTTTGTGAATGATCCTGAGAATAGTGACATTCTTGATTTGCTACTTGAGGTGCTTCCTTTGGAACAGAATCCGGAGGTACGCAAAACAATTGTTTTATCTCTGCCTCCTTCAAATGCAACCACCCAAGCAATTATTGATTGCACGCTCGATGTTAATGAATCAGTACGCAAAGCAGCTTACTCTGTTCTGGCTAATAAAGTTCCTCTTCAGAGTCTGAGCATCAAGCTAAGGACCACAATTCTTCAGAGAGGGCTCGCTGATCGTGCTGTAAATGTTTCAACGGAATGCTTGAAGCTAATGAAAGAGCAATGGCTAGCTAACTATTGTGAAGGAGATCCTATCACATTTCTTAAATACCTTGACGTTGAAACCTACGAATCTGTGGCAGAATCGGCGTTGGAAGTTCTGTTGAGTGAAGGGTTGATAATGCCCTCCGATGATAAAAGCATCCAGCAGTACATATTGTCAGCAGATGGTGAAACTAGAGATGAAAGCACATGTTCTGCACCCAGCATTCAACTTATGGAGCCAGAGATTGCTCTTTACTGGAGGATTATATGCAGGAAGGTGCACCAAAGTGCTCAAGCAAAAGGTTCTGATGCTGCTACAGCGATGGGTGCTGAAGCAGCAGTTTATGCTGCTGAAGCTTCAGATGCTAATGATTTGCTGGAAAGAATTCTTCCTGCAACAGTTTCTGATTATGTTGATCTAGTTAAAGCTCATATAGAAGCAGGACCAAATCATCACTTTGCTTCGAGGCAGCTATTATTGTTGGGTACGATGCTTGATTTCTCTGATGCTATGCTCCACAAGACTGTGAGCTCATTTGTCCAGGAGCTGCTCCGCAGACCTTTTGAGCAAGAATTAGATGAAGATGGGAACAGTATTGTGATTGGAGATGGTATAAACCTTGGTGGTGATAAAGATTGGGCTGAGGCAGTGTCGAAATTGGCTAAAAAAGTCCATGCTGCCCCTGGAGAATATGAAGAAGTTATACTTGTTGTTGTTGAAGAAGTAGCGAGACCCTGCAGGGAAAGGACTGCGGATTTCCTGCAGTGGATGCACATGCTTTCTCTGACAAGTCTTCTCTTGGAAAATGGAAAATCTTTACATTCACTGCAAGGGAAGGCTATTGAACCAGAAGAGATATTGCATGCTCTATTGCTTCCAGGGGCAAAACACACTCACTTGGATGTGCAGAGGATTGCTATAAAGGGCCTTGGTCTTTTTGGTTTGTTAGAGAAGAAGCCTAGCGAAGAGCTAGTAAGGCAGCTACGTGCAGCTTTTTGCAGAAGCCCTCCTCCAATTAGTATTATGGCTTGCAAGGCACTAGTGGATCTTGGGATGTGGCATAGCCCAACTGAAGTTGACAAGGCAATGGGACAAGATCTCTTGTCACAATTTGAGGATGACAGCATTGATTTTGCACCCATCGACTTATCCAATGCCGAAGAAGATATGAACTTTAAAATGCTCGATCTCTTGTATGCTGGACTTGAAAGTGATGACTGGAGAGCATCCACAGAGAGCAGTGAGAATGAGTCAGTTAAAGCAACTGTTGGGGAGGGGTTTGCAAAACTTCTTCTTCTAGGAGAGAAGTACCCAAACTTGCCTGCATCTTTCTATCCGTTTGTATTGGGAAAGCTAATTGCTTTATATTTCAGTGAGGAGTCAAAAGAACAACTGAGGTTTAAACAGTGTTTATCCGTCTTCTTTGAGCACTATGCCTCCCTCTCAGAAAAACATAAGGGATACGTGTCAAAGGCTTTTGTTCCTCTTGTACGCTCAATGTGGCCTGGGATTGATGGAAACACTAAAAGTTCGTCATATGTTGTATCAAATCAACGCAAGCGCGCAGTCCAAGTATCCAGATTCATCCTACAGATGATGCAAACCCCGCTATACAAAAAAGAGACAAGAGGTGAGCCTGAAAGCCAGGTCAATAAATCACCAGAAGATTCTATCCAACATCCACTAAACTGTACAGAAGAAGGTTTGGCCATACGCATAGCCATCGAGATGCTAAGCTTCAAAGAAAAGAAGACTGCTCATGAGAAGGCATATGTTGCAGCGCTGTGCAAAATACTTGTGCTGCTCCATCTGAAACCATCAGAACAAAATGTGACAAAGTTGTTGAAAAAGCTTTTAAGCCTACTCGCAGATTCTGTACGTTCAGAGAAGGATCTTCTTAAAGAAGTGAAACCGGTGCTTCAACATCTAAAATCTTTGGATGCTTGTCCAAGCGAGGAGCTTACACAAGATCAAGCAAATTCCATCTTTGAAATACTCGGAGTTAGCTACAACTTAGAGATCACTGAAACTACAACAGTGCCACAGACACCTGCTCCTTGCTCAACAAAACCAGCTCGGTCAAGAAGACGAGCAAGGATTGAAGAAACATCCTCTGATGAAGAAGAAGTAGCATCTCCTCCACCTTCTGCTCCTAATACTTTGATGACCCGATCACACCGTGCAAGTAAAGCTGCTGCCTTGGCCAAAATAATGGCAAGCAAAGTGAAAATGAGCAATGTAGACGAGGATGATGAGGAAGAAGAAGGTTCTTCTGATGTTACAGCAGATGATTCAGATGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04111 map04111
Pfam Domains
Protein Families
Cnd3

Protein Analysis

1051

Amino Acids

116.75

Weight (kDa)

5.06

Isoelectric Point (pI)

54.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cnd3 PF12719 542 - 888 3.1e-54 Nuclear condensing complex subunits, C-term domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2911
Acc36I ACCTGC 1 cut(s) 2911
AccI GTMKAC 1 cut(s) 3093
AccII CGCG 3 cut(s) 239, 398, 2415
AccIII TCCGGA 1 cut(s) 631
AciI CCGC 7 cut(s) 239, 255, 287, 464, 1405, 1604, 2459
AclWI GGATC 5 cut(s) 64, 566, 890, 1905, 2751
AcoI YGGCCR 2 cut(s) 2559, 3054
AcsI RAATTY 4 cut(s) 290, 350, 1236, 2830
AcuI CTGAAG 7 cut(s) 15, 752, 788, 1194, 1203, 1224, 1944
AdeI CACNNNGTG 1 cut(s) 3032
AfaI GTAC 9 cut(s) 535, 639, 726, 1019, 1339, 2162, 2343, 2545, 2730
AfeI AGCGCT 1 cut(s) 2634
AflII CTTAAG 1 cut(s) 356
AflIII ACRYGT 2 cut(s) 1058, 2316
AgeI ACCGGT 1 cut(s) 2764
AhlI ACTAGT 1 cut(s) 1891
AjnI CCWGG 5 cut(s) 1392, 1534, 1729, 2356, 2496
AleI CACNNNNGTG 1 cut(s) 1137
Alw21I GWGCWC 5 cut(s) 126, 1134, 1144, 1385, 2283
Alw26I GTCTC 4 cut(s) 74, 555, 1576, 2468
Alw44I GTGCAC 1 cut(s) 1130
AlwI GGATC 5 cut(s) 64, 566, 890, 1905, 2751
AlwNI CAGNNNCTG 4 cut(s) 775, 1256, 1399, 2726
Aor13HI TCCGGA 1 cut(s) 631
Aor51HI AGCGCT 1 cut(s) 2634
AoxI GGCC 4 cut(s) 1777, 2354, 2559, 3054
ApaLI GTGCAC 1 cut(s) 1130
ApoI RAATTY 4 cut(s) 290, 350, 1236, 2830
AsiGI ACCGGT 1 cut(s) 2764
Asp700I GAANNNNTTC 1 cut(s) 1236
AspLEI GCGC 3 cut(s) 2415, 2417, 2635
AspS9I GGNCC 3 cut(s) 792, 1295, 1777
AsuHPI GGTGA 5 cut(s) 332, 1049, 1490, 2495, 2502
AsuNHI GCTAGC 1 cut(s) 874
AvaII GGWCC 2 cut(s) 792, 1295
BaeGI GKGCMC 1 cut(s) 1134
BalI TGGCCA 2 cut(s) 2561, 3056
BanII GRGCYC 3 cut(s) 126, 816, 1385
BarI GAAGNNNNNNTAC 2 cut(s) 1539, 1571
BbsI GAAGAC 6 cut(s) 171, 293, 1637, 2263, 2609, 2944
Bbv12I GWGCWC 5 cut(s) 126, 1134, 1144, 1385, 2283
BbvCI CCTCAGC 1 cut(s) 1494
BcgI CGANNNNNNTGC 2 cut(s) 2557, 2591
BciT130I CCWGG 5 cut(s) 1394, 1536, 1731, 2358, 2498
BciVI GTATCC 2 cut(s) 2306, 2437
BcoDI GTCTC 4 cut(s) 74, 555, 1576, 2468
BcuI ACTAGT 1 cut(s) 1891
BfaI CTAG 8 cut(s) 344, 875, 1044, 1271, 1812, 1823, 1892, 2150
BfmI CTRYAG 5 cut(s) 258, 1167, 1588, 1613, 2441
BfoI RGCGCY 1 cut(s) 2636
BfrI CTTAAG 1 cut(s) 356
BfuAI ACCTGC 1 cut(s) 2911
BfuI GTATCC 2 cut(s) 2306, 2437
BglII AGATCT 1 cut(s) 1948
BlpI GCTNAGC 1 cut(s) 2585
Bme1390I CCNGG 5 cut(s) 1394, 1536, 1731, 2358, 2498
Bme18I GGWCC 2 cut(s) 792, 1295
BmgT120I GGNCC 3 cut(s) 792, 1295, 1777
BmiI GGNNCC 1 cut(s) 1089
BmrFI CCNGG 5 cut(s) 1394, 1536, 1731, 2358, 2498
BmtI GCTAGC 1 cut(s) 878
BpiI GAAGAC 6 cut(s) 171, 293, 1637, 2263, 2609, 2944
BpmI CTGGAG 3 cut(s) 1129, 1557, 2092
Bpu10I CCTNAGC 2 cut(s) 788, 1494
Bpu1102I GCTNAGC 1 cut(s) 2585
BpuEI CTTGAG 2 cut(s) 626, 1128
BsaAI YACGTR 3 cut(s) 533, 1838, 2317
BsaI GGTCTC 2 cut(s) 555, 1576
BsaJI CCNNGG 7 cut(s) 24, 1471, 1534, 1730, 1780, 2357, 3051
BsaWI WCCGGW 2 cut(s) 631, 2764
BsaXI ACNNNNNCTCC 6 cut(s) 308, 338, 2273, 2303, 2890, 2920
Bse118I RCCGGY 1 cut(s) 2764
Bse1I ACTGG 2 cut(s) 1112, 2075
Bse3DI GCAATG 3 cut(s) 875, 1944, 3094
BseAI TCCGGA 1 cut(s) 631
BseBI CCWGG 5 cut(s) 1394, 1536, 1731, 2358, 2498
BseDI CCNNGG 7 cut(s) 24, 1471, 1534, 1730, 1780, 2357, 3051
BseMI GCAATG 3 cut(s) 875, 1944, 3094
BseMII CTCAG 5 cut(s) 567, 767, 1485, 2237, 2310
BseNI ACTGG 2 cut(s) 1112, 2075
BsePI GCGCGC 1 cut(s) 2413
BseRI GAGGAG 4 cut(s) 1851, 2243, 2822, 2979
BseSI GKGCMC 1 cut(s) 1134
BseYI CCCAGC 2 cut(s) 371, 1070
BsgI GTGCAG 3 cut(s) 1050, 1778, 1860
Bsh1236I CGCG 3 cut(s) 239, 398, 2415
BshFI GGCC 4 cut(s) 1779, 2356, 2561, 3056
BshTI ACCGGT 1 cut(s) 2764
BsiHKAI GWGCWC 5 cut(s) 126, 1134, 1144, 1385, 2283
BsiSI CCGG 2 cut(s) 632, 2765
BslFI GGGAC 2 cut(s) 527, 1956
BsmAI GTCTC 4 cut(s) 74, 555, 1576, 2468
BsmFI GGGAC 2 cut(s) 527, 1956
BsmI GAATGC 2 cut(s) 851, 1074
BsnI GGCC 4 cut(s) 1779, 2356, 2561, 3056
Bso31I GGTCTC 2 cut(s) 555, 1576
Bsp1286I GDGCHC 6 cut(s) 126, 816, 1134, 1144, 1385, 2283
Bsp13I TCCGGA 1 cut(s) 631
Bsp1407I TGTACA 1 cut(s) 2543
Bsp1720I GCTNAGC 1 cut(s) 2585
Bsp19I CCATGG 1 cut(s) 24
BspACI CCGC 7 cut(s) 239, 255, 287, 464, 1405, 1604, 2459
BspANI GGCC 4 cut(s) 1779, 2356, 2561, 3056
BspCNI CTCAG 5 cut(s) 568, 768, 1486, 2238, 2309
BspEI TCCGGA 1 cut(s) 631
BspFNI CGCG 3 cut(s) 239, 398, 2415
BspHI TCATGA 1 cut(s) 2611
BspLI GGNNCC 1 cut(s) 1089
BspMAI CTGCAG 3 cut(s) 262, 1592, 1617
BspMI ACCTGC 1 cut(s) 2911
BspOI GCTAGC 1 cut(s) 878
BspPI GGATC 5 cut(s) 64, 566, 890, 1905, 2751
BspQI GCTCTTC 1 cut(s) 1812
BspTI CTTAAG 1 cut(s) 356
BspTNI GGTCTC 2 cut(s) 555, 1576
BsrDI GCAATG 3 cut(s) 875, 1944, 3094
BsrFI RCCGGY 1 cut(s) 2764
BsrGI TGTACA 1 cut(s) 2543
BsrI ACTGG 2 cut(s) 1112, 2075
BssAI RCCGGY 1 cut(s) 2764
BssECI CCNNGG 7 cut(s) 24, 1471, 1534, 1730, 1780, 2357, 3051
BssHII GCGCGC 1 cut(s) 2413
BssT1I CCWWGG 4 cut(s) 24, 1471, 1780, 3051
Bst2UI CCWGG 5 cut(s) 1394, 1536, 1731, 2358, 2498
Bst6I CTCTTC 4 cut(s) 205, 771, 1698, 1812
BstAFI CTTAAG 1 cut(s) 356
BstAPI GCANNNNNTGC 3 cut(s) 1196, 1621, 2627
BstAUI TGTACA 1 cut(s) 2543
BstBAI YACGTR 3 cut(s) 533, 1838, 2317
BstDEI CTNAG 8 cut(s) 576, 776, 788, 1494, 2246, 2296, 2585, 2866
BstDSI CCRYGG 1 cut(s) 24
BstFNI CGCG 3 cut(s) 239, 398, 2415
BstH2I RGCGCY 1 cut(s) 2636
BstHHI GCGC 3 cut(s) 2415, 2417, 2635
BstMAI GTCTC 4 cut(s) 74, 555, 1576, 2468
BstNI CCWGG 5 cut(s) 1394, 1536, 1731, 2358, 2498
BstNSI RCATGY 3 cut(s) 1062, 1630, 1718
BstSCI CCNGG 5 cut(s) 1392, 1534, 1729, 2356, 2496
BstSFI CTRYAG 5 cut(s) 258, 1167, 1588, 1613, 2441
BstSLI GKGCMC 1 cut(s) 1134
BstSNI TACGTA 1 cut(s) 533
BstUI CGCG 3 cut(s) 239, 398, 2415
BstV2I GAAGAC 6 cut(s) 171, 293, 1637, 2263, 2609, 2944
BstX2I RGATCY 5 cut(s) 69, 895, 1897, 1948, 2743
BstXI CCANNNNNNTGG 1 cut(s) 3064
BstYI RGATCY 5 cut(s) 69, 895, 1897, 1948, 2743
BsuI GTATCC 2 cut(s) 2306, 2437
BsuRI GGCC 4 cut(s) 1779, 2356, 2561, 3056
BtgI CCRYGG 1 cut(s) 24
BtgZI GCGATG 2 cut(s) 220, 1187
BtsI GCAGTG 4 cut(s) 1506, 1622, 1676, 2098
BtsIMutI CAGTG 8 cut(s) 1506, 1622, 1676, 2098, 2230, 2264, 2874, 2895
BveI ACCTGC 1 cut(s) 2911
CaiI CAGNNNCTG 4 cut(s) 775, 1256, 1399, 2726
CciI TCATGA 1 cut(s) 2611
CfoI GCGC 3 cut(s) 2415, 2417, 2635
Cfr10I RCCGGY 1 cut(s) 2764
Cfr13I GGNCC 3 cut(s) 792, 1295, 1777
Csp6I GTAC 9 cut(s) 534, 638, 725, 1018, 1338, 2161, 2342, 2544, 2729
CspAI ACCGGT 1 cut(s) 2764
CviAII CATG 6 cut(s) 25, 1059, 1526, 1627, 1715, 2612
CviQI GTAC 9 cut(s) 534, 638, 725, 1018, 1338, 2161, 2342, 2544, 2729
DdeI CTNAG 8 cut(s) 576, 776, 788, 1494, 2246, 2296, 2585, 2866
DraI TTTAAA 2 cut(s) 2029, 2254
DraIII CACNNNGTG 1 cut(s) 3032
EaeI YGGCCR 2 cut(s) 2559, 3054
Eam1104I CTCTTC 4 cut(s) 205, 771, 1698, 1812
EarI CTCTTC 4 cut(s) 205, 771, 1698, 1812
EciI GGCGGA 1 cut(s) 302
Ecl136II GAGCTC 2 cut(s) 124, 1383
Eco105I TACGTA 1 cut(s) 533
Eco130I CCWWGG 4 cut(s) 24, 1471, 1780, 3051
Eco24I GRGCYC 3 cut(s) 126, 816, 1385
Eco31I GGTCTC 2 cut(s) 555, 1576
Eco47I GGWCC 2 cut(s) 792, 1295
Eco47III AGCGCT 1 cut(s) 2634
Eco53kI GAGCTC 2 cut(s) 124, 1383
Eco57I CTGAAG 7 cut(s) 15, 752, 788, 1194, 1203, 1224, 1944
EcoICRI GAGCTC 2 cut(s) 124, 1383
EcoO109I RGGNCCY 1 cut(s) 1777
EcoRI GAATTC 2 cut(s) 290, 1236
EcoRII CCWGG 5 cut(s) 1392, 1534, 1729, 2356, 2496
EcoT14I CCWWGG 4 cut(s) 24, 1471, 1780, 3051
EcoT38I GRGCYC 3 cut(s) 126, 816, 1385
ErhI CCWWGG 4 cut(s) 24, 1471, 1780, 3051
FaeI CATG 6 cut(s) 28, 1062, 1529, 1630, 1718, 2615
FalI AAGNNNNNCTT 4 cut(s) 750, 782, 1542, 1574
FaqI GGGAC 2 cut(s) 527, 1956
FatI CATG 6 cut(s) 24, 1058, 1525, 1626, 1714, 2611
FauI CCCGC 1 cut(s) 2466
FauNDI CATATG 2 cut(s) 2389, 2623
FblI GTMKAC 1 cut(s) 3093
FriOI GRGCYC 3 cut(s) 126, 816, 1385
FspBI CTAG 8 cut(s) 344, 875, 1044, 1271, 1812, 1823, 1892, 2150
GlaI GCGC 3 cut(s) 2414, 2416, 2634
GsaI CCCAGC 2 cut(s) 375, 1074
GsuI CTGGAG 3 cut(s) 1129, 1557, 2092
HaeII RGCGCY 1 cut(s) 2636
HaeIII GGCC 4 cut(s) 1779, 2356, 2561, 3056
HapII CCGG 2 cut(s) 632, 2765
HhaI GCGC 3 cut(s) 2415, 2417, 2635
Hin1II CATG 6 cut(s) 28, 1062, 1529, 1630, 1718, 2615
Hin6I GCGC 3 cut(s) 2413, 2415, 2633
HinP1I GCGC 3 cut(s) 2413, 2415, 2633
HincII GTYRAC 1 cut(s) 1930
HindII GTYRAC 1 cut(s) 1930
HindIII AAGCTT 3 cut(s) 1206, 2587, 2702
HpaII CCGG 2 cut(s) 632, 2765
HphI GGTGA 5 cut(s) 332, 1049, 1490, 2495, 2502
Hpy166II GTNNAC 3 cut(s) 1132, 1930, 3094
Hpy188III TCNNGA 9 cut(s) 344, 512, 575, 593, 632, 2430, 2578, 2612, 2934
Hpy8I GTNNAC 3 cut(s) 1132, 1930, 3094
Hpy99I CGWCG 1 cut(s) 338
HpyCH4IV ACGT 6 cut(s) 532, 559, 924, 1837, 2316, 2731
HpyF3I CTNAG 8 cut(s) 576, 776, 788, 1494, 2246, 2296, 2585, 2866
HpySE526I ACGT 6 cut(s) 532, 559, 924, 1837, 2316, 2731
Hsp92II CATG 6 cut(s) 28, 1062, 1529, 1630, 1718, 2615
HspAI GCGC 3 cut(s) 2413, 2415, 2633
Kpn2I TCCGGA 1 cut(s) 631
LguI GCTCTTC 1 cut(s) 1812
LmnI GCTCC 9 cut(s) 121, 1087, 1371, 1396, 1407, 2661, 2809, 2911, 3007
MaeI CTAG 8 cut(s) 344, 875, 1044, 1271, 1812, 1823, 1892, 2150
MaeII ACGT 6 cut(s) 532, 559, 924, 1837, 2316, 2731
MaeIII GTNAC 5 cut(s) 320, 584, 1956, 2683, 3130
MfeI CAATTG 1 cut(s) 648
MflI RGATCY 5 cut(s) 69, 895, 1897, 1948, 2743
MhlI GDGCHC 6 cut(s) 126, 816, 1134, 1144, 1385, 2283
MlsI TGGCCA 2 cut(s) 2561, 3056
MluNI TGGCCA 2 cut(s) 2561, 3056
MlyI GAGTC 6 cut(s) 76, 179, 317, 781, 2111, 2240
MmeI TCCRAC 2 cut(s) 939, 2551
Mox20I TGGCCA 2 cut(s) 2561, 3056
MroI TCCGGA 1 cut(s) 631
MroXI GAANNNNTTC 1 cut(s) 1236
MscI TGGCCA 2 cut(s) 2561, 3056
MseI TTAA 9 cut(s) 357, 714, 912, 1275, 2028, 2109, 2253, 2708, 2751
MslI CAYNNNNRTG 3 cut(s) 1137, 1752, 2579
Msp20I TGGCCA 2 cut(s) 2561, 3056
MspA1I CMGCKG 1 cut(s) 257
MspCI CTTAAG 1 cut(s) 356
MspI CCGG 2 cut(s) 632, 2765
MspR9I CCNGG 5 cut(s) 1394, 1536, 1731, 2358, 2498
MssI GTTTAAAC 1 cut(s) 2254
MunI CAATTG 1 cut(s) 648
Mva1269I GAATGC 2 cut(s) 851, 1074
MvaI CCWGG 5 cut(s) 1394, 1536, 1731, 2358, 2498
MvnI CGCG 3 cut(s) 239, 398, 2415
NcoI CCATGG 1 cut(s) 24
NdeI CATATG 2 cut(s) 2389, 2623
NheI GCTAGC 1 cut(s) 874
NlaIII CATG 6 cut(s) 28, 1062, 1529, 1630, 1718, 2615
NlaIV GGNNCC 1 cut(s) 1089
NmuCI GTSAC 4 cut(s) 320, 584, 1956, 2683
NspI RCATGY 3 cut(s) 1062, 1630, 1718
OliI CACNNNNGTG 1 cut(s) 1137
PaeI GCATGC 1 cut(s) 1718
PagI TCATGA 1 cut(s) 2611
PaqCI CACCTGC 1 cut(s) 2911
PauI GCGCGC 1 cut(s) 2413
PciI ACATGT 1 cut(s) 1058
PciSI GCTCTTC 1 cut(s) 1812
PcsI WCGNNNNNNNCGW 1 cut(s) 324
PctI GAATGC 2 cut(s) 851, 1074
PdmI GAANNNNTTC 1 cut(s) 1236
PfoI TCCNGGA 1 cut(s) 1392
PinAI ACCGGT 1 cut(s) 2764
PleI GAGTC 6 cut(s) 76, 178, 317, 780, 2110, 2239
PmeI GTTTAAAC 1 cut(s) 2254
PpsI GAGTC 6 cut(s) 76, 178, 317, 780, 2110, 2239
Ppu21I YACGTR 3 cut(s) 533, 1838, 2317
PscI ACATGT 1 cut(s) 1058
Psp124BI GAGCTC 2 cut(s) 126, 1385
Psp6I CCWGG 5 cut(s) 1392, 1534, 1729, 2356, 2496
PspFI CCCAGC 2 cut(s) 371, 1070
PspGI CCWGG 5 cut(s) 1392, 1534, 1729, 2356, 2496
PspN4I GGNNCC 1 cut(s) 1089
PspPI GGNCC 3 cut(s) 792, 1295, 1777
PstI CTGCAG 3 cut(s) 262, 1592, 1617
PstNI CAGNNNCTG 4 cut(s) 775, 1256, 1399, 2726
PsuI RGATCY 5 cut(s) 69, 895, 1897, 1948, 2743
PteI GCGCGC 1 cut(s) 2413
RsaI GTAC 9 cut(s) 535, 639, 726, 1019, 1339, 2162, 2343, 2545, 2730
RsaNI GTAC 9 cut(s) 534, 638, 725, 1018, 1338, 2161, 2342, 2544, 2729
RseI CAYNNNNRTG 3 cut(s) 1137, 1752, 2579
SacI GAGCTC 2 cut(s) 126, 1385
SapI GCTCTTC 1 cut(s) 1812
SaqAI TTAA 9 cut(s) 357, 714, 912, 1275, 2028, 2109, 2253, 2708, 2751
Sau96I GGNCC 3 cut(s) 792, 1295, 1777
SbfI CCTGCAGG 1 cut(s) 1592
SchI GAGTC 6 cut(s) 76, 179, 317, 781, 2111, 2240
ScrFI CCNGG 5 cut(s) 1394, 1536, 1731, 2358, 2498
SdaI CCTGCAGG 1 cut(s) 1592
SduI GDGCHC 6 cut(s) 126, 816, 1134, 1144, 1385, 2283
SfcI CTRYAG 5 cut(s) 258, 1167, 1588, 1613, 2441
SinI GGWCC 2 cut(s) 792, 1295
SmiMI CAYNNNNRTG 3 cut(s) 1137, 1752, 2579
SmlI CTYRAG 3 cut(s) 356, 605, 1143
SmoI CTYRAG 3 cut(s) 356, 605, 1143
SnaBI TACGTA 1 cut(s) 533
SpeI ACTAGT 1 cut(s) 1891
SphI GCATGC 1 cut(s) 1718
Sse8387I CCTGCAGG 1 cut(s) 1592
SsiI CCGC 7 cut(s) 239, 255, 287, 464, 1405, 1604, 2459
SspMI CTAG 8 cut(s) 344, 875, 1044, 1271, 1812, 1823, 1892, 2150
SstI GAGCTC 2 cut(s) 126, 1385
StyD4I CCNGG 5 cut(s) 1392, 1534, 1729, 2356, 2496
StyI CCWWGG 4 cut(s) 24, 1471, 1780, 3051
TaiI ACGT 6 cut(s) 535, 562, 927, 1840, 2319, 2734
TaqI TCGA 8 cut(s) 40, 277, 708, 1316, 1505, 1995, 2037, 2577
TaqII GACCGA 1 cut(s) 2919
TatI WGTACW 2 cut(s) 1017, 2543
TauI GCSGC 1 cut(s) 242
Tru1I TTAA 9 cut(s) 357, 714, 912, 1275, 2028, 2109, 2253, 2708, 2751
Tru9I TTAA 9 cut(s) 357, 714, 912, 1275, 2028, 2109, 2253, 2708, 2751
TscAI CASTG 8 cut(s) 1506, 1622, 1683, 2098, 2230, 2264, 2881, 2895
TseFI GTSAC 4 cut(s) 320, 584, 1956, 2683
Tsp45I GTSAC 4 cut(s) 320, 584, 1956, 2683
TspGWI ACGGA 6 cut(s) 125, 163, 193, 857, 2178, 2257
TspRI CASTG 8 cut(s) 1506, 1622, 1683, 2098, 2230, 2264, 2881, 2895
Vha464I CTTAAG 1 cut(s) 356
VneI GTGCAC 1 cut(s) 1130
VpaK11BI GGWCC 2 cut(s) 792, 1295
XapI RAATTY 4 cut(s) 290, 350, 1236, 2830
XbaI TCTAGA 1 cut(s) 343
XceI RCATGY 3 cut(s) 1062, 1630, 1718
XcmI CCANNNNNNNNNTGG 1 cut(s) 1532
XmiI GTMKAC 1 cut(s) 3093
XmnI GAANNNNTTC 1 cut(s) 1236
XspI CTAG 8 cut(s) 344, 875, 1044, 1271, 1812, 1823, 1892, 2150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.