Condensin complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G37630 |
| fragaria_vesca | FvH4_1g30230 FvH4_1g30230 |
| malus_domestica | MD09G1270700.v1.1 MD17G1268900.v1.1 |
| prunus_persica | Prupe.3G017700_v2.0.a1 Prupe.3G017700_v2.0.a1 |
| pyrus_communis | pycom09g18180 pycom17g26750 pycom17g26760 |
| rosa_chinensis | RchiOBHm_Chr3g0491161 |
| rosa_laevigata | RLG00000022858 |
| rosa_multiflora | Rmu_co8352689.1_g000001 Rmu_sc0024833.1_g000001 Rmu_ssc0000202.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00393110 |
| rosa_rugosa | Rorug03G0246600 |
| rosa_samantha | Rh3AG297000 Rh3AG297100 Rh3BG333000 Rh3BG333100 Rh3CG330100 Rh3CG330200 Rh3DG330700 Rh3DG330800 |
| rosa_wichuraiana | Rw3G026200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1083, 2557 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 136 |
| AatII | GACGTC | 1 cut(s) | 134 |
| Acc16I | TGCGCA | 1 cut(s) | 674 |
| Acc36I | ACCTGC | 2 cut(s) | 1083, 2557 |
| AccB1I | GGYRCC | 1 cut(s) | 1071 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1030 |
| AccBSI | CCGCTC | 1 cut(s) | 123 |
| AclI | AACGTT | 1 cut(s) | 2817 |
| AclWI | GGATC | 2 cut(s) | 2691, 3097 |
| AcoI | YGGCCR | 1 cut(s) | 2300 |
| AcsI | RAATTY | 4 cut(s) | 704, 884, 1182, 1487 |
| AcuI | CTGAAG | 7 cut(s) | 734, 1011, 1140, 1461, 1850, 2152, 3007 |
| AcyI | GRCGYC | 2 cut(s) | 131, 909 |
| AfaI | GTAC | 7 cut(s) | 202, 686, 939, 965, 1994, 2165, 2451 |
| AfeI | AGCGCT | 1 cut(s) | 2962 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 195, 316, 336, 1030, 1081, 1597, 2722, 2874 |
| AhlI | ACTAGT | 1 cut(s) | 1768 |
| AjnI | CCWGG | 2 cut(s) | 1761, 1890 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1488, 1520 |
| AleI | CACNNNNGTG | 2 cut(s) | 1334, 2519 |
| Alw21I | GWGCWC | 2 cut(s) | 420, 2065 |
| Alw26I | GTCTC | 3 cut(s) | 249, 725, 834 |
| AlwI | GGATC | 2 cut(s) | 2691, 3097 |
| Ama87I | CYCGRG | 2 cut(s) | 252, 1727 |
| Aor51HI | AGCGCT | 1 cut(s) | 2962 |
| AoxI | GGCC | 7 cut(s) | 204, 249, 262, 1529, 1588, 1888, 2300 |
| ApoI | RAATTY | 4 cut(s) | 704, 884, 1182, 1487 |
| AseI | ATTAAT | 3 cut(s) | 743, 2633, 2648 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 954 |
| AspLEI | GCGC | 3 cut(s) | 675, 2292, 2963 |
| AspS9I | GGNCC | 6 cut(s) | 250, 263, 466, 1241, 1802, 1888 |
| AsuC2I | CCSGG | 2 cut(s) | 2304, 2443 |
| AsuHPI | GGTGA | 4 cut(s) | 959, 1436, 1496, 2498 |
| AsuNHI | GCTAGC | 1 cut(s) | 1325 |
| AvaI | CYCGRG | 2 cut(s) | 252, 1727 |
| AvaII | GGWCC | 3 cut(s) | 466, 1241, 1802 |
| BaeGI | GKGCMC | 1 cut(s) | 1127 |
| BanI | GGYRCC | 1 cut(s) | 1071 |
| BanII | GRGCYC | 2 cut(s) | 420, 499 |
| BbsI | GAAGAC | 4 cut(s) | 132, 596, 2549, 2919 |
| Bbv12I | GWGCWC | 2 cut(s) | 420, 2065 |
| BceAI | ACGGC | 2 cut(s) | 219, 264 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 364, 398 |
| BciT130I | CCWGG | 2 cut(s) | 1763, 1892 |
| BclI | TGATCA | 1 cut(s) | 1375 |
| BcnI | CCSGG | 2 cut(s) | 2304, 2443 |
| BcoDI | GTCTC | 3 cut(s) | 249, 725, 834 |
| BcuI | ACTAGT | 1 cut(s) | 1768 |
| BfaI | CTAG | 8 cut(s) | 566, 695, 699, 975, 1326, 1479, 1769, 2795 |
| BfmI | CTRYAG | 5 cut(s) | 486, 832, 1076, 2550, 2988 |
| BfoI | RGCGCY | 1 cut(s) | 2964 |
| BfuAI | ACCTGC | 2 cut(s) | 1083, 2557 |
| BlpI | GCTNAGC | 1 cut(s) | 2509 |
| Bme1390I | CCNGG | 4 cut(s) | 1763, 1892, 2304, 2443 |
| Bme18I | GGWCC | 3 cut(s) | 466, 1241, 1802 |
| BmeT110I | CYCGRG | 2 cut(s) | 252, 1727 |
| BmgT120I | GGNCC | 6 cut(s) | 250, 263, 466, 1241, 1802, 1888 |
| BmiI | GGNNCC | 6 cut(s) | 308, 350, 468, 1073, 1803, 2403 |
| BmrFI | CCNGG | 4 cut(s) | 1763, 1892, 2304, 2443 |
| BmsI | GCATC | 7 cut(s) | 388, 1029, 1096, 1225, 1294, 1557, 1712 |
| BmtI | GCTAGC | 1 cut(s) | 1329 |
| BpiI | GAAGAC | 4 cut(s) | 132, 596, 2549, 2919 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3041, 3073 |
| BpmI | CTGGAG | 1 cut(s) | 2343 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2509 |
| BpuEI | CTTGAG | 5 cut(s) | 86, 842, 1196, 1915, 2705 |
| BpuMI | CCSGG | 2 cut(s) | 2304, 2443 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2736 |
| BsaHI | GRCGYC | 2 cut(s) | 131, 909 |
| BsaI | GGTCTC | 1 cut(s) | 834 |
| BsaJI | CCNNGG | 4 cut(s) | 246, 1726, 2110, 2442 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 160, 190, 885, 915, 2830, 2860 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 195, 316, 336, 1030, 1081, 1597, 2722, 2874 |
| Bse118I | RCCGGY | 1 cut(s) | 316 |
| Bse1I | ACTGG | 1 cut(s) | 2733 |
| Bse3DI | GCAATG | 6 cut(s) | 1006, 1171, 1286, 1618, 2179, 2323 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2736 |
| BseBI | CCWGG | 2 cut(s) | 1763, 1892 |
| BseDI | CCNNGG | 4 cut(s) | 246, 1726, 2110, 2442 |
| BseJI | GATNNNNATC | 1 cut(s) | 2736 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 195, 316, 336, 1030, 1081, 1597, 2722, 2874 |
| BseMI | GCAATG | 6 cut(s) | 1006, 1171, 1286, 1618, 2179, 2323 |
| BseMII | CTCAG | 4 cut(s) | 316, 736, 2256, 3072 |
| BseNI | ACTGG | 1 cut(s) | 2733 |
| BseRI | GAGGAG | 3 cut(s) | 852, 1532, 2504 |
| BseSI | GKGCMC | 1 cut(s) | 1127 |
| BseYI | CCCAGC | 1 cut(s) | 1997 |
| BsgI | GTGCAG | 1 cut(s) | 2382 |
| BshFI | GGCC | 7 cut(s) | 206, 251, 264, 1531, 1590, 1890, 2302 |
| BshNI | GGYRCC | 1 cut(s) | 1071 |
| BsiHKAI | GWGCWC | 2 cut(s) | 420, 2065 |
| BsiHKCI | CYCGRG | 2 cut(s) | 252, 1727 |
| BsiSI | CCGG | 4 cut(s) | 261, 317, 2303, 2442 |
| BsiWI | CGTACG | 1 cut(s) | 200 |
| BslFI | GGGAC | 5 cut(s) | 452, 473, 771, 1400, 2033 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 195, 316, 336, 1030, 1081, 1597, 2722, 2874 |
| BsmAI | GTCTC | 3 cut(s) | 249, 725, 834 |
| BsmFI | GGGAC | 5 cut(s) | 452, 473, 771, 1400, 2033 |
| BsmI | GAATGC | 2 cut(s) | 158, 1623 |
| BsnI | GGCC | 7 cut(s) | 206, 251, 264, 1531, 1590, 1890, 2302 |
| Bso31I | GGTCTC | 1 cut(s) | 834 |
| BsoBI | CYCGRG | 2 cut(s) | 252, 1727 |
| Bsp1286I | GDGCHC | 4 cut(s) | 420, 499, 1127, 2065 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2509 |
| BspANI | GGCC | 7 cut(s) | 206, 251, 264, 1531, 1590, 1890, 2302 |
| BspCNI | CTCAG | 4 cut(s) | 315, 735, 2255, 3071 |
| BspLI | GGNNCC | 6 cut(s) | 308, 350, 468, 1073, 1803, 2403 |
| BspMAI | CTGCAG | 5 cut(s) | 490, 836, 1080, 2554, 2992 |
| BspMI | ACCTGC | 2 cut(s) | 1083, 2557 |
| BspOI | GCTAGC | 1 cut(s) | 1329 |
| BspPI | GGATC | 2 cut(s) | 2691, 3097 |
| BspT107I | GGYRCC | 1 cut(s) | 1071 |
| BspTNI | GGTCTC | 1 cut(s) | 834 |
| BsrBI | CCGCTC | 1 cut(s) | 123 |
| BsrDI | GCAATG | 6 cut(s) | 1006, 1171, 1286, 1618, 2179, 2323 |
| BsrFI | RCCGGY | 1 cut(s) | 316 |
| BsrI | ACTGG | 1 cut(s) | 2733 |
| BssAI | RCCGGY | 1 cut(s) | 316 |
| BssECI | CCNNGG | 4 cut(s) | 246, 1726, 2110, 2442 |
| BssNI | GRCGYC | 2 cut(s) | 131, 909 |
| BssT1I | CCWWGG | 1 cut(s) | 2110 |
| Bst2UI | CCWGG | 2 cut(s) | 1763, 1892 |
| Bst6I | CTCTTC | 4 cut(s) | 18, 152, 717, 2889 |
| BstACI | GRCGYC | 2 cut(s) | 131, 909 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 1142, 1186, 1567, 2395 |
| BstDEI | CTNAG | 5 cut(s) | 302, 722, 2242, 2509, 3058 |
| BstDSI | CCRYGG | 1 cut(s) | 246 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 193 |
| BstH2I | RGCGCY | 1 cut(s) | 2964 |
| BstHHI | GCGC | 3 cut(s) | 675, 2292, 2963 |
| BstMAI | GTCTC | 3 cut(s) | 249, 725, 834 |
| BstNI | CCWGG | 2 cut(s) | 1763, 1892 |
| BstNSI | RCATGY | 3 cut(s) | 1263, 1475, 2119 |
| BstSCI | CCNGG | 4 cut(s) | 1761, 1890, 2302, 2441 |
| BstSFI | CTRYAG | 5 cut(s) | 486, 832, 1076, 2550, 2988 |
| BstSLI | GKGCMC | 1 cut(s) | 1127 |
| BstV2I | GAAGAC | 4 cut(s) | 132, 596, 2549, 2919 |
| BstX2I | RGATCY | 2 cut(s) | 2683, 3089 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2521 |
| BstYI | RGATCY | 2 cut(s) | 2683, 3089 |
| BsuRI | GGCC | 7 cut(s) | 206, 251, 264, 1531, 1590, 1890, 2302 |
| BtgI | CCRYGG | 1 cut(s) | 246 |
| BtgZI | GCGATG | 1 cut(s) | 993 |
| BtsI | GCAGTG | 4 cut(s) | 418, 1568, 1570, 1722 |
| BveI | ACCTGC | 2 cut(s) | 1083, 2557 |
| CfoI | GCGC | 3 cut(s) | 675, 2292, 2963 |
| Cfr10I | RCCGGY | 1 cut(s) | 316 |
| Cfr13I | GGNCC | 6 cut(s) | 250, 263, 466, 1241, 1802, 1888 |
| CseI | GACGC | 3 cut(s) | 74, 290, 917 |
| Csp6I | GTAC | 7 cut(s) | 201, 685, 938, 964, 1993, 2164, 2450 |
| CviAII | CATG | 8 cut(s) | 1260, 1367, 1390, 1472, 2116, 2287, 2395, 2806 |
| CviQI | GTAC | 7 cut(s) | 201, 685, 938, 964, 1993, 2164, 2450 |
| DdeI | CTNAG | 5 cut(s) | 302, 722, 2242, 2509, 3058 |
| DraI | TTTAAA | 1 cut(s) | 1941 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 136 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 136 |
| EaeI | YGGCCR | 1 cut(s) | 2300 |
| Eam1104I | CTCTTC | 4 cut(s) | 18, 152, 717, 2889 |
| EarI | CTCTTC | 4 cut(s) | 18, 152, 717, 2889 |
| EciI | GGCGGA | 5 cut(s) | 20, 103, 199, 1163, 2719 |
| Ecl136II | GAGCTC | 1 cut(s) | 418 |
| Eco130I | CCWWGG | 1 cut(s) | 2110 |
| Eco24I | GRGCYC | 2 cut(s) | 420, 499 |
| Eco31I | GGTCTC | 1 cut(s) | 834 |
| Eco32I | GATATC | 1 cut(s) | 1965 |
| Eco47I | GGWCC | 3 cut(s) | 466, 1241, 1802 |
| Eco47III | AGCGCT | 1 cut(s) | 2962 |
| Eco53kI | GAGCTC | 1 cut(s) | 418 |
| Eco57I | CTGAAG | 7 cut(s) | 734, 1011, 1140, 1461, 1850, 2152, 3007 |
| Eco88I | CYCGRG | 2 cut(s) | 252, 1727 |
| EcoICRI | GAGCTC | 1 cut(s) | 418 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 193 |
| EcoO109I | RGGNCCY | 2 cut(s) | 466, 1802 |
| EcoRI | GAATTC | 1 cut(s) | 884 |
| EcoRII | CCWGG | 2 cut(s) | 1761, 1890 |
| EcoRV | GATATC | 1 cut(s) | 1965 |
| EcoT14I | CCWWGG | 1 cut(s) | 2110 |
| EcoT38I | GRGCYC | 2 cut(s) | 420, 499 |
| ErhI | CCWWGG | 1 cut(s) | 2110 |
| FaeI | CATG | 8 cut(s) | 1263, 1370, 1393, 1475, 2119, 2290, 2398, 2809 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 2049, 2081, 2076, 2108, 2757, 2789, 2874, 2906 |
| FaqI | GGGAC | 5 cut(s) | 452, 473, 771, 1400, 2033 |
| FatI | CATG | 8 cut(s) | 1259, 1366, 1389, 1471, 2115, 2286, 2394, 2805 |
| FauI | CCCGC | 2 cut(s) | 448, 2128 |
| FauNDI | CATATG | 1 cut(s) | 2563 |
| FbaI | TGATCA | 1 cut(s) | 1375 |
| FriOI | GRGCYC | 2 cut(s) | 420, 499 |
| FspBI | CTAG | 8 cut(s) | 566, 695, 699, 975, 1326, 1479, 1769, 2795 |
| FspI | TGCGCA | 1 cut(s) | 674 |
| GlaI | GCGC | 3 cut(s) | 674, 2291, 2962 |
| GsaI | CCCAGC | 1 cut(s) | 2001 |
| GsuI | CTGGAG | 1 cut(s) | 2343 |
| HaeII | RGCGCY | 1 cut(s) | 2964 |
| HaeIII | GGCC | 7 cut(s) | 206, 251, 264, 1531, 1590, 1890, 2302 |
| HapII | CCGG | 4 cut(s) | 261, 317, 2303, 2442 |
| HgaI | GACGC | 3 cut(s) | 74, 290, 917 |
| HhaI | GCGC | 3 cut(s) | 675, 2292, 2963 |
| Hin1I | GRCGYC | 2 cut(s) | 131, 909 |
| Hin1II | CATG | 8 cut(s) | 1263, 1370, 1393, 1475, 2119, 2290, 2398, 2809 |
| Hin6I | GCGC | 3 cut(s) | 673, 2290, 2961 |
| HinP1I | GCGC | 3 cut(s) | 673, 2290, 2961 |
| HindIII | AAGCTT | 1 cut(s) | 1152 |
| HpaII | CCGG | 4 cut(s) | 261, 317, 2303, 2442 |
| HphI | GGTGA | 4 cut(s) | 959, 1436, 1496, 2498 |
| Hpy99I | CGWCG | 6 cut(s) | 16, 68, 136, 139, 284, 2874 |
| HpyCH4IV | ACGT | 5 cut(s) | 131, 505, 1896, 2377, 2817 |
| HpyF3I | CTNAG | 5 cut(s) | 302, 722, 2242, 2509, 3058 |
| HpySE526I | ACGT | 5 cut(s) | 131, 505, 1896, 2377, 2817 |
| Hsp92I | GRCGYC | 2 cut(s) | 131, 909 |
| Hsp92II | CATG | 8 cut(s) | 1263, 1370, 1393, 1475, 2119, 2290, 2398, 2809 |
| HspAI | GCGC | 3 cut(s) | 673, 2290, 2961 |
| Ksp22I | TGATCA | 1 cut(s) | 1375 |
| LmnI | GCTCC | 6 cut(s) | 106, 128, 1813, 2407, 2601, 2851 |
| LweI | GCATC | 7 cut(s) | 388, 1029, 1096, 1225, 1294, 1557, 1712 |
| MaeI | CTAG | 8 cut(s) | 566, 695, 699, 975, 1326, 1479, 1769, 2795 |
| MaeII | ACGT | 5 cut(s) | 131, 505, 1896, 2377, 2817 |
| MaeIII | GTNAC | 2 cut(s) | 622, 3064 |
| MbiI | CCGCTC | 1 cut(s) | 123 |
| MflI | RGATCY | 2 cut(s) | 2683, 3089 |
| MhlI | GDGCHC | 4 cut(s) | 420, 499, 1127, 2065 |
| MlyI | GAGTC | 5 cut(s) | 251, 334, 753, 905, 2057 |
| MmeI | TCCRAC | 3 cut(s) | 102, 871, 1048 |
| MroXI | GAANNNNTTC | 1 cut(s) | 954 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1233, 1334, 2479, 2519 |
| MspA1I | CMGCKG | 2 cut(s) | 1550, 1679 |
| MspI | CCGG | 4 cut(s) | 261, 317, 2303, 2442 |
| MspR9I | CCNGG | 4 cut(s) | 1763, 1892, 2304, 2443 |
| Mva1269I | GAATGC | 2 cut(s) | 158, 1623 |
| MvaI | CCWGG | 2 cut(s) | 1763, 1892 |
| NciI | CCSGG | 2 cut(s) | 2304, 2443 |
| NdeI | CATATG | 1 cut(s) | 2563 |
| NheI | GCTAGC | 1 cut(s) | 1325 |
| NlaIII | CATG | 8 cut(s) | 1263, 1370, 1393, 1475, 2119, 2290, 2398, 2809 |
| NlaIV | GGNNCC | 6 cut(s) | 308, 350, 468, 1073, 1803, 2403 |
| NmeAIII | GCCGAG | 1 cut(s) | 1507 |
| NsbI | TGCGCA | 1 cut(s) | 674 |
| NspI | RCATGY | 3 cut(s) | 1263, 1475, 2119 |
| OliI | CACNNNNGTG | 2 cut(s) | 1334, 2519 |
| PacI | TTAATTAA | 1 cut(s) | 933 |
| PaeI | GCATGC | 2 cut(s) | 1475, 2119 |
| PaqCI | CACCTGC | 2 cut(s) | 1083, 2557 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 223 |
| PctI | GAATGC | 2 cut(s) | 158, 1623 |
| PdmI | GAANNNNTTC | 1 cut(s) | 954 |
| PfeI | GAWTC | 8 cut(s) | 228, 644, 665, 998, 2177, 2663, 2900, 3080 |
| Pfl23II | CGTACG | 1 cut(s) | 200 |
| PflFI | GACNNNGTC | 2 cut(s) | 133, 464 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1030 |
| PleI | GAGTC | 5 cut(s) | 251, 334, 753, 904, 2056 |
| PpsI | GAGTC | 5 cut(s) | 251, 334, 753, 904, 2056 |
| PpuMI | RGGWCCY | 2 cut(s) | 466, 1802 |
| PshBI | ATTAAT | 3 cut(s) | 743, 2633, 2648 |
| Psp124BI | GAGCTC | 1 cut(s) | 420 |
| Psp1406I | AACGTT | 1 cut(s) | 2817 |
| Psp5II | RGGWCCY | 2 cut(s) | 466, 1802 |
| Psp6I | CCWGG | 2 cut(s) | 1761, 1890 |
| PspFI | CCCAGC | 1 cut(s) | 1997 |
| PspGI | CCWGG | 2 cut(s) | 1761, 1890 |
| PspLI | CGTACG | 1 cut(s) | 200 |
| PspN4I | GGNNCC | 6 cut(s) | 308, 350, 468, 1073, 1803, 2403 |
| PspPI | GGNCC | 6 cut(s) | 250, 263, 466, 1241, 1802, 1888 |
| PspPPI | RGGWCCY | 2 cut(s) | 466, 1802 |
| PstI | CTGCAG | 5 cut(s) | 490, 836, 1080, 2554, 2992 |
| PsuI | RGATCY | 2 cut(s) | 2683, 3089 |
| PsyI | GACNNNGTC | 2 cut(s) | 133, 464 |
| PvuII | CAGCTG | 1 cut(s) | 1550 |
| RsaI | GTAC | 7 cut(s) | 202, 686, 939, 965, 1994, 2165, 2451 |
| RsaNI | GTAC | 7 cut(s) | 201, 685, 938, 964, 1993, 2164, 2450 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1233, 1334, 2479, 2519 |
| SacI | GAGCTC | 1 cut(s) | 420 |
| Sau96I | GGNCC | 6 cut(s) | 250, 263, 466, 1241, 1802, 1888 |
| SchI | GAGTC | 5 cut(s) | 251, 334, 753, 905, 2057 |
| ScrFI | CCNGG | 4 cut(s) | 1763, 1892, 2304, 2443 |
| SduI | GDGCHC | 4 cut(s) | 420, 499, 1127, 2065 |
| SfaNI | GCATC | 7 cut(s) | 388, 1029, 1096, 1225, 1294, 1557, 1712 |
| SfcI | CTRYAG | 5 cut(s) | 486, 832, 1076, 2550, 2988 |
| SinI | GGWCC | 3 cut(s) | 466, 1241, 1802 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1233, 1334, 2479, 2519 |
| SmlI | CTYRAG | 5 cut(s) | 101, 857, 1175, 1930, 2720 |
| SmoI | CTYRAG | 5 cut(s) | 101, 857, 1175, 1930, 2720 |
| SpeI | ACTAGT | 1 cut(s) | 1768 |
| SphI | GCATGC | 2 cut(s) | 1475, 2119 |
| SspI | AATATT | 2 cut(s) | 955, 1972 |
| SspMI | CTAG | 8 cut(s) | 566, 695, 699, 975, 1326, 1479, 1769, 2795 |
| SstI | GAGCTC | 1 cut(s) | 420 |
| StyD4I | CCNGG | 4 cut(s) | 1761, 1890, 2302, 2441 |
| StyI | CCWWGG | 1 cut(s) | 2110 |
| TaiI | ACGT | 5 cut(s) | 134, 508, 1899, 2380, 2820 |
| TaqI | TCGA | 3 cut(s) | 226, 374, 1967 |
| TatI | WGTACW | 2 cut(s) | 963, 2163 |
| TauI | GCSGC | 3 cut(s) | 332, 1148, 1682 |
| TfiI | GAWTC | 8 cut(s) | 228, 644, 665, 998, 2177, 2663, 2900, 3080 |
| TspGWI | ACGGA | 2 cut(s) | 467, 2041 |
| Tth111I | GACNNNGTC | 2 cut(s) | 133, 464 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1030 |
| VpaK11BI | GGWCC | 3 cut(s) | 466, 1241, 1802 |
| VspI | ATTAAT | 3 cut(s) | 743, 2633, 2648 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 193 |
| XapI | RAATTY | 4 cut(s) | 704, 884, 1182, 1487 |
| XbaI | TCTAGA | 1 cut(s) | 565 |
| XceI | RCATGY | 3 cut(s) | 1263, 1475, 2119 |
| XmnI | GAANNNNTTC | 1 cut(s) | 954 |
| XspI | CTAG | 8 cut(s) | 566, 695, 699, 975, 1326, 1479, 1769, 2795 |
| ZraI | GACGTC | 1 cut(s) | 132 |