Rw3G026200

Condensin complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0006579
Physical Location & Seq
Reverse (-)
35695479 .. 35704121
8643 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G026200.1

Sequence Viewer

Length: 3153 bp
ATGGAGAAAGCCACAGACGAAGAAGAGAAGCCTGTAATGCTCAGAATCGCTCAAATCCTAGACGAGGCTCGCGCCTCCAACGCCATCCACAACCGGAAATGCAAGGAGCTCTACGCCCTCCGCTCCAAAACGGCGTCGTCTTCCGTCTTCTTCACATCCTTCTGCAAGACCCTGCTCCCGCTGTTCGCCTTCCAGAGACGCGCCGCCTCCGCCGAGCGCATCGTTCGCTTCGTCTCCGCCTTCGCCACCGGCGGAGGCCCTGACCAAAGCGACGCTGCTTTCTTGGACGAATTCCTCAGGTTCCTTTTGACTGCTTCTACTGCTTCTAATCGGACGGCGAGGTTCCGGGCCTGCCAGATTATTTCTGAGATCATTATGCAATTACCGGATGATGCAGAAGTAAGCAGTGAACTTTGGGATGAAGTAATAGACTGTATGATGTTGCGTGCGGGGGACAAGATCCCTGTGATTCGTACAGTTGCAGTTAGGGCGCTTTCACGTTTTGCAAGTGATTGTGAGAACAGTGATATCGTTGATTTATTTCTTGAGATGCTTCCTGTAGAACAAATTGTGGAGGTTCGGAAGACAATAGTGCTCTCTCTACCTCCTTCAAATGCAACCGCACAAGCAATCATTGATTGCACATTAGATGTCAGTGAATCAGTGCGAAAAGCAGCATACTGTGTTCTAGCCAGTAAATTTCCTCTTCAAAGCCTCAGTATCAAGCATAGAACATTAATTCTTCGGAGGGGACTTGCCGATCGTTCTCTTGCTGTTTCAAAGGAGTGTCTTAAATTAATGAAAGATGAATGGCTGAACAAGTGCTGCAATGGAGATCCTTTAGTACTTCTCAAGTATCTTGATGTGGAAACCTATGAAATGGTCGGGGAGTCTGTAGCAGGGGCCTTGTTAAAAGGTGGTGAAATTAGAGTACCTGAAGGTGAAAGTATCCGGCAGTACATATTGTCTAACAGTGAAAGAGCTGAAGAAGACTCAGAACGTTGCACACCAAACATCCAACTGATGGAAGCGGAGGTTGCACTTTACTGGAGGATGATATGTAGGCACCTGCAGATGGAGGCACAAGAGAAAGGCTCTGATGCTGCTTCTACTATGGGCACCGAGGCAGCAGTGTATGCTGCAGAAGCTACAGACAACAATGACCTTCTTGAGAGAATCCTGCCAGCAACAATTTCTGATTATATAGATCTAGTCAAATCTCACATTGATGCTGGTTCCAATTATCGCTTTGCATGTCGACAGCTACTATTGCTTGGTGCAATGCTTGATTTTTCGGATACATCAAACAGGAAGGTTGCTAGTGCATTTGTGCTGGAACTGCTCCATAAGCCTTTCGATCATGAAGTAGATGAGTATGGGAACATGGTTGTTATAGGAGATGGAATAAATCTTGGTGGTGATCGAGATTGGTCTGATGCGGTGTATGGGTTGGCAAGCAAGGTGCATGCTGCCAGTGGTGAATTTGAAGAAGTTGTTCTTAGGGTTGTAGAGGAGCTTGCTCTCCCTTGCAGGGAGAGAACAGCAGATTTTATGCAGTGGATGCACTGTCTTGCTGTTTTTGGCCTTTGCTTAGAGAAGGCAAAATCACATCAGTCGATCAAAGGGAGAGCTATTGAACCTGTTGAACTACTGCAATCTCTGTTGCTTCCGGCGGCAAAACATTCTCACTTGGACGTGCAGAGGATTGCAGTTAGGTGCCTCGGGCTTTTTGGGTTGTTAGAGAAAAGGCCAAGTGAGGAACTAGTAAAGCAGTTAAAGCTTTCTTTTGTTAAGGGCCCTGCTCCAATTAGCATAGTGGCTTGTAAGGCATTGTTTGATCTTGGGATGTGGCATCAACCTCAGGAAGTTGATAGGACTGTGGGTCAGAACATGTCATCACAATTTCAAGACTATGGGATGACTTCTAGTCCCTTAGACATTTCTGATATGGATGGGAACTTGAATCTTAAATTGCTTGATCTTTTGTATGCTGGACTTCTTAAGGATGATTGGGACAATTCTGTACCTAGTGAAGAGAATGAGTCTGTTCAAGGTGCACTTGGGGAGGGTTTTGCAAAAATTCTTCTCCTAAGTGAGAATTACCAAAGCATACCTGCTTGTTTAAATCCTTTGCTTTTATCCAAGCTCATTACCTTGTACTTCAGCAATGAATCTAAGGAGTTGCAGAGGTTGAAACAGTGCTTATCTGTGTTCTTTGAGCATTACCCTTCCCTCTCTGCCAACCACAAGGAAAGTAGTGAAATTGGTTGTAAATGTTGTCAAATTAATTTTTTACTAAAGTGTATATCCAAGGCTTTCATTCCTATCACACGTTCTATGTGGCCCGGTGTCAATGGCAATGCTGGAGGTTCTGCGTCTGTGGTGTCTAATATGCGTAAACGTGCAGTCCAAGTATTACGTTTCATGCTGCAGATGATCCAGGCCCCTCTATATGCAAAGGCGACCGAGGATGACAGAAACACTAGGGACCAACCAGAAGTTATAGATGGTACCGTGGAACCTCCACTTGAGAGTGGGGAGGAAGGGCTTGCAATACGCATAGCCACAGAGGTGGCAGCCTTCCCTACAAAGAAGACTCCTGCAGAGAGGTCATATGTGTCAGCATTATGTAGAATACTTGTTTTACTCCAATTTCGGGTATCAGAGCAAGAAGCAATCCAGTTAATGAGGAGGCTTTTAGTTCGTGTGGCTGAATCTGTATTGGCAGAGAAAGATCTTGTGAAGGAGTTGAGGCGAATGGCTGAGCGTCTCAAGGCATTAGATAAACATCCTGACATGGAAATATCACAAGATCAAGCTAATCTTATATTTGGAAGGTTAGAACTAGACTTCAACTTGGAATTCAATATATCTGCTGAAATGCCGCAAACACCAGCTCCTTGCTCAAGCAGACCAACACGTACCAGAAGAAGAGTCAGGCAAGAGGAGGAATCTTCTGATGAAGATAGTTCGCCCACCTCTGTTGTTCCTAATAGTGTTGGCCCTATGAGCTCTCGTTCACAGAGAGCAAGCAAGACTGCAGCACTGACCAAGATAACGACTGCCATTACAGCCCCCACGATTGATGAAGATGATGAAGAGGAAGAAAGCTCAGGTGTGACATCTGATGACGATTCTGATGGCTCTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04111 map04111
Pfam Domains
Protein Families
Cnd3

Protein Analysis

1050

Amino Acids

116.64

Weight (kDa)

5.08

Isoelectric Point (pI)

50.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cnd3 PF12719 522 - 885 3.3e-46 Nuclear condensing complex subunits, C-term domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1077
Acc36I ACCTGC 2 cut(s) 1077, 2122
Acc65I GGTACC 1 cut(s) 2510
AccB1I GGYRCC 4 cut(s) 1065, 1118, 1716, 2510
AccB7I CCANNNNNTGG 1 cut(s) 1024
AccBSI CCGCTC 1 cut(s) 123
AccI GTMKAC 1 cut(s) 1258
AccII CGCG 2 cut(s) 72, 201
AclI AACGTT 1 cut(s) 1000
AclWI GGATC 3 cut(s) 454, 830, 2431
AcsI RAATTY 5 cut(s) 290, 698, 1481, 2079, 2861
AcuI CTGAAG 3 cut(s) 957, 1005, 2146
AcyI GRCGYC 1 cut(s) 134
AfaI GTAC 8 cut(s) 475, 846, 933, 959, 2025, 2159, 2512, 2923
AfiI CCNNNNNNNGG 5 cut(s) 64, 1024, 1075, 1531, 2656
AflII CTTAAG 1 cut(s) 2000
AflIII ACRYGT 3 cut(s) 1890, 2330, 2918
AhdI GACNNNNNGTC 2 cut(s) 1881, 1926
AhlI ACTAGT 1 cut(s) 1762
AjiI CACGTC 1 cut(s) 1696
AjnI CCWGG 1 cut(s) 2439
AleI CACNNNNGTG 1 cut(s) 2570
Alw21I GWGCWC 4 cut(s) 111, 597, 2059, 3014
Alw26I GTCTC 3 cut(s) 190, 238, 2774
Alw44I GTGCAC 1 cut(s) 2055
AlwI GGATC 3 cut(s) 454, 830, 2431
Ama87I CYCGRG 1 cut(s) 1721
AoxI GGCC 9 cut(s) 256, 348, 903, 1582, 1748, 1795, 2342, 2442, 3001
ApaI GGGCCC 1 cut(s) 1799
ApaLI GTGCAC 1 cut(s) 2055
ApoI RAATTY 5 cut(s) 290, 698, 1481, 2079, 2861
AseI ATTAAT 3 cut(s) 737, 797, 2286
Asp700I GAANNNNTTC 1 cut(s) 1494
Asp718I GGTACC 1 cut(s) 2510
AspLEI GCGC 4 cut(s) 74, 203, 219, 493
AspS9I GGNCC 9 cut(s) 257, 348, 903, 1795, 1796, 2343, 2443, 2488, 3002
AsuC2I CCSGG 2 cut(s) 347, 2346
AsuHPI GGTGA 4 cut(s) 932, 953, 1430, 1490
AvaI CYCGRG 1 cut(s) 1721
AvaII GGWCC 1 cut(s) 2488
AxyI CCTNAGG 2 cut(s) 296, 1860
BaeGI GKGCMC 3 cut(s) 1121, 1799, 2059
BanI GGYRCC 4 cut(s) 1065, 1118, 1716, 2510
BanII GRGCYC 3 cut(s) 111, 1799, 3014
BbsI GAAGAC 5 cut(s) 132, 139, 590, 996, 2600
Bbv12I GWGCWC 4 cut(s) 111, 597, 2059, 3014
BccI CCATC 7 cut(s) 92, 1018, 1069, 1394, 1946, 2501, 3134
BceAI ACGGC 2 cut(s) 147, 351
BciT130I CCWGG 1 cut(s) 2441
BciVI GTATCC 2 cut(s) 959, 1291
BcnI CCSGG 2 cut(s) 347, 2346
BcoDI GTCTC 3 cut(s) 190, 238, 2774
BcuI ACTAGT 1 cut(s) 1762
BfaI CTAG 9 cut(s) 59, 689, 1211, 1320, 1763, 1926, 2028, 2484, 2846
BfmI CTRYAG 8 cut(s) 558, 894, 1070, 1140, 1149, 2429, 2601, 3039
BfoI RGCGCY 1 cut(s) 494
BfrI CTTAAG 1 cut(s) 2000
BfuAI ACCTGC 2 cut(s) 1077, 2122
BfuI GTATCC 2 cut(s) 959, 1291
BglII AGATCT 2 cut(s) 1207, 2734
BlpI GCTNAGC 1 cut(s) 2763
BmcAI AGTACT 1 cut(s) 846
Bme1390I CCNGG 3 cut(s) 347, 2346, 2441
Bme18I GGWCC 1 cut(s) 2488
BmeRI GACNNNNNGTC 2 cut(s) 1881, 1926
BmeT110I CYCGRG 1 cut(s) 1721
BmgBI CACGTC 1 cut(s) 1696
BmgT120I GGNCC 9 cut(s) 257, 348, 903, 1795, 1796, 2343, 2443, 2488, 3002
BmrFI CCNGG 3 cut(s) 347, 2346, 2441
BmsI GCATC 8 cut(s) 228, 382, 540, 1090, 1219, 1426, 1551, 1861
BpiI GAAGAC 5 cut(s) 132, 139, 590, 996, 2600
BplI GAGNNNNNCTC 2 cut(s) 1079, 1111
BpmI CTGGAG 2 cut(s) 1069, 2385
Bpu10I CCTNAGC 1 cut(s) 3112
Bpu1102I GCTNAGC 1 cut(s) 2763
BpuEI CTTGAG 6 cut(s) 566, 836, 1190, 2549, 2756, 2890
BpuMI CCSGG 2 cut(s) 347, 2346
BsaAI YACGTR 1 cut(s) 2921
BsaBI GATNNNNATC 1 cut(s) 2787
BsaHI GRCGYC 1 cut(s) 134
BsaJI CCNNGG 5 cut(s) 1122, 1720, 2310, 2466, 2514
BsaWI WCCGGW 2 cut(s) 93, 385
BsaXI ACNNNNNCTCC 2 cut(s) 2881, 2911
Bsc4I CCNNNNNNNGG 5 cut(s) 64, 1024, 1075, 1531, 2656
Bse118I RCCGGY 1 cut(s) 248
Bse1I ACTGG 4 cut(s) 693, 1052, 1473, 2680
Bse21I CCTNAGG 2 cut(s) 296, 1860
Bse3DI GCAATG 4 cut(s) 835, 1287, 2173, 2365
Bse8I GATNNNNATC 1 cut(s) 2787
BseBI CCWGG 1 cut(s) 2441
BseDI CCNNGG 5 cut(s) 1122, 1720, 2310, 2466, 2514
BseJI GATNNNNATC 1 cut(s) 2787
BseLI CCNNNNNNNGG 5 cut(s) 64, 1024, 1075, 1531, 2656
BseMI GCAATG 4 cut(s) 835, 1287, 2173, 2365
BseMII CTCAG 8 cut(s) 55, 310, 357, 730, 1008, 1874, 2754, 3126
BseNI ACTGG 4 cut(s) 693, 1052, 1473, 2680
BseRI GAGGAG 3 cut(s) 1526, 2704, 2960
BseSI GKGCMC 3 cut(s) 1121, 1799, 2059
BsgI GTGCAG 2 cut(s) 1718, 2424
Bsh1236I CGCG 2 cut(s) 72, 201
Bsh1285I CGRYCG 2 cut(s) 763, 2466
BshFI GGCC 9 cut(s) 258, 350, 905, 1584, 1750, 1797, 2344, 2444, 3003
BshNI GGYRCC 4 cut(s) 1065, 1118, 1716, 2510
BsiEI CGRYCG 2 cut(s) 763, 2466
BsiHKAI GWGCWC 4 cut(s) 111, 597, 2059, 3014
BsiHKCI CYCGRG 1 cut(s) 1721
BsiSI CCGG 7 cut(s) 94, 249, 346, 386, 952, 1670, 2346
BslFI GGGAC 5 cut(s) 467, 765, 1914, 2027, 2501
BslI CCNNNNNNNGG 5 cut(s) 64, 1024, 1075, 1531, 2656
BsmAI GTCTC 3 cut(s) 190, 238, 2774
BsmBI CGTCTC 3 cut(s) 190, 238, 2774
BsmFI GGGAC 5 cut(s) 467, 765, 1914, 2027, 2501
BsnI GGCC 9 cut(s) 258, 350, 905, 1584, 1750, 1797, 2344, 2444, 3003
BsoBI CYCGRG 1 cut(s) 1721
Bsp120I GGGCCC 1 cut(s) 1795
Bsp1286I GDGCHC 6 cut(s) 111, 597, 1121, 1799, 2059, 3014
Bsp1720I GCTNAGC 1 cut(s) 2763
BspANI GGCC 9 cut(s) 258, 350, 905, 1584, 1750, 1797, 2344, 2444, 3003
BspCNI CTCAG 8 cut(s) 54, 309, 358, 729, 1007, 1873, 2755, 3125
BspFNI CGCG 2 cut(s) 72, 201
BspHI TCATGA 1 cut(s) 1360
BspMAI CTGCAG 5 cut(s) 1074, 1144, 2433, 2605, 3043
BspMI ACCTGC 2 cut(s) 1077, 2122
BspPI GGATC 3 cut(s) 454, 830, 2431
BspT107I GGYRCC 4 cut(s) 1065, 1118, 1716, 2510
BspTI CTTAAG 1 cut(s) 2000
BsrBI CCGCTC 1 cut(s) 123
BsrDI GCAATG 4 cut(s) 835, 1287, 2173, 2365
BsrFI RCCGGY 1 cut(s) 248
BsrI ACTGG 4 cut(s) 693, 1052, 1473, 2680
BssAI RCCGGY 1 cut(s) 248
BssECI CCNNGG 5 cut(s) 1122, 1720, 2310, 2466, 2514
BssNI GRCGYC 1 cut(s) 134
BssT1I CCWWGG 1 cut(s) 2310
Bst2UI CCWGG 1 cut(s) 2441
Bst4CI ACNGT 9 cut(s) 434, 478, 524, 683, 974, 1568, 1879, 2199, 2515
Bst6I CTCTTC 5 cut(s) 18, 711, 2028, 2926, 3093
BstACI GRCGYC 1 cut(s) 134
BstAFI CTTAAG 1 cut(s) 2000
BstAPI GCANNNNNTGC 2 cut(s) 1136, 1561
BstBAI YACGTR 1 cut(s) 2921
BstC8I GCNNGC 9 cut(s) 70, 352, 447, 1185, 1456, 1467, 1518, 2550, 3031
BstDSI CCRYGG 1 cut(s) 2514
BstENI CCTNNNNNAGG 1 cut(s) 62
BstFNI CGCG 2 cut(s) 72, 201
BstH2I RGCGCY 1 cut(s) 494
BstHHI GCGC 4 cut(s) 74, 203, 219, 493
BstMAI GTCTC 3 cut(s) 190, 238, 2774
BstMCI CGRYCG 2 cut(s) 763, 2466
BstNI CCWGG 1 cut(s) 2441
BstNSI RCATGY 3 cut(s) 1257, 1469, 1894
BstSCI CCNGG 3 cut(s) 345, 2344, 2439
BstSFI CTRYAG 8 cut(s) 558, 894, 1070, 1140, 1149, 2429, 2601, 3039
BstSLI GKGCMC 3 cut(s) 1121, 1799, 2059
BstUI CGCG 2 cut(s) 72, 201
BstV2I GAAGAC 5 cut(s) 132, 139, 590, 996, 2600
BstX2I RGATCY 4 cut(s) 459, 835, 1207, 2734
BstXI CCANNNNNNTGG 1 cut(s) 2572
BstYI RGATCY 4 cut(s) 459, 835, 1207, 2734
Bsu36I CCTNAGG 2 cut(s) 296, 1860
BsuI GTATCC 2 cut(s) 959, 1291
BsuRI GGCC 9 cut(s) 258, 350, 905, 1584, 1750, 1797, 2344, 2444, 3003
BtgI CCRYGG 1 cut(s) 2514
BtrI CACGTC 1 cut(s) 1696
BtsI GCAGTG 3 cut(s) 412, 1137, 1562
BveI ACCTGC 2 cut(s) 1077, 2122
Cac8I GCNNGC 9 cut(s) 70, 352, 447, 1185, 1456, 1467, 1518, 2550, 3031
CciI TCATGA 1 cut(s) 1360
CfoI GCGC 4 cut(s) 74, 203, 219, 493
Cfr10I RCCGGY 1 cut(s) 248
Cfr13I GGNCC 9 cut(s) 257, 348, 903, 1795, 1796, 2343, 2443, 2488, 3002
CseI GACGC 5 cut(s) 123, 207, 281, 2364, 2756
Csp6I GTAC 8 cut(s) 474, 845, 932, 958, 2024, 2158, 2511, 2922
CspCI CAANNNNNGTGG 2 cut(s) 2965, 3000
CviAII CATG 7 cut(s) 1254, 1361, 1384, 1466, 1891, 2425, 2797
CviQI GTAC 8 cut(s) 474, 845, 932, 958, 2024, 2158, 2511, 2922
DraI TTTAAA 1 cut(s) 2124
DriI GACNNNNNGTC 2 cut(s) 1881, 1926
Eam1104I CTCTTC 5 cut(s) 18, 711, 2028, 2926, 3093
Eam1105I GACNNNNNGTC 2 cut(s) 1881, 1926
EarI CTCTTC 5 cut(s) 18, 711, 2028, 2926, 3093
EciI GGCGGA 3 cut(s) 199, 226, 267
Ecl136II GAGCTC 2 cut(s) 109, 3012
Eco130I CCWWGG 1 cut(s) 2310
Eco24I GRGCYC 3 cut(s) 111, 1799, 3014
Eco32I GATATC 1 cut(s) 529
Eco47I GGWCC 1 cut(s) 2488
Eco53kI GAGCTC 2 cut(s) 109, 3012
Eco57I CTGAAG 3 cut(s) 957, 1005, 2146
Eco81I CCTNAGG 2 cut(s) 296, 1860
Eco88I CYCGRG 1 cut(s) 1721
EcoICRI GAGCTC 2 cut(s) 109, 3012
EcoNI CCTNNNNNAGG 1 cut(s) 62
EcoO109I RGGNCCY 5 cut(s) 257, 903, 1795, 1796, 2443
EcoRI GAATTC 2 cut(s) 290, 2861
EcoRII CCWGG 1 cut(s) 2439
EcoRV GATATC 1 cut(s) 529
EcoT14I CCWWGG 1 cut(s) 2310
EcoT38I GRGCYC 3 cut(s) 111, 1799, 3014
ErhI CCWWGG 1 cut(s) 2310
Esp3I CGTCTC 3 cut(s) 190, 238, 2774
FaeI CATG 7 cut(s) 1257, 1364, 1387, 1469, 1894, 2428, 2800
FalI AAGNNNNNCTT 6 cut(s) 1482, 1514, 2043, 2075, 2808, 2840
FaqI GGGAC 5 cut(s) 467, 765, 1914, 2027, 2501
FatI CATG 7 cut(s) 1253, 1360, 1383, 1465, 1890, 2424, 2796
FauI CCCGC 2 cut(s) 186, 442
FauNDI CATATG 1 cut(s) 2614
FblI GTMKAC 1 cut(s) 1258
FriOI GRGCYC 3 cut(s) 111, 1799, 3014
FspBI CTAG 9 cut(s) 59, 689, 1211, 1320, 1763, 1926, 2028, 2484, 2846
GlaI GCGC 4 cut(s) 73, 202, 218, 492
GsuI CTGGAG 2 cut(s) 1069, 2385
HaeII RGCGCY 1 cut(s) 494
HaeIII GGCC 9 cut(s) 258, 350, 905, 1584, 1750, 1797, 2344, 2444, 3003
HapII CCGG 7 cut(s) 94, 249, 346, 386, 952, 1670, 2346
HgaI GACGC 5 cut(s) 123, 207, 281, 2364, 2756
HhaI GCGC 4 cut(s) 74, 203, 219, 493
Hin1I GRCGYC 1 cut(s) 134
Hin1II CATG 7 cut(s) 1257, 1364, 1387, 1469, 1894, 2428, 2800
Hin6I GCGC 4 cut(s) 72, 201, 217, 491
HinP1I GCGC 4 cut(s) 72, 201, 217, 491
HincII GTYRAC 1 cut(s) 1259
HindII GTYRAC 1 cut(s) 1259
HindIII AAGCTT 1 cut(s) 1778
HpaII CCGG 7 cut(s) 94, 249, 346, 386, 952, 1670, 2346
HphI GGTGA 4 cut(s) 932, 953, 1430, 1490
Hpy166II GTNNAC 5 cut(s) 410, 1259, 2057, 2399, 3020
Hpy188III TCNNGA 9 cut(s) 193, 545, 860, 1169, 1361, 1424, 1862, 1907, 2792
Hpy8I GTNNAC 5 cut(s) 410, 1259, 2057, 2399, 3020
Hpy99I CGWCG 2 cut(s) 139, 275
HpyCH4III ACNGT 9 cut(s) 434, 478, 524, 683, 974, 1568, 1879, 2199, 2515
HpyCH4IV ACGT 7 cut(s) 499, 1000, 1695, 2332, 2401, 2419, 2920
HpySE526I ACGT 7 cut(s) 499, 1000, 1695, 2332, 2401, 2419, 2920
Hsp92I GRCGYC 1 cut(s) 134
Hsp92II CATG 7 cut(s) 1257, 1364, 1387, 1469, 1894, 2428, 2800
HspAI GCGC 4 cut(s) 72, 201, 217, 491
KpnI GGTACC 1 cut(s) 2514
LmnI GCTCC 7 cut(s) 106, 128, 180, 1347, 1513, 1807, 2902
LweI GCATC 8 cut(s) 228, 382, 540, 1090, 1219, 1426, 1551, 1861
MaeI CTAG 9 cut(s) 59, 689, 1211, 1320, 1763, 1926, 2028, 2484, 2846
MaeII ACGT 7 cut(s) 499, 1000, 1695, 2332, 2401, 2419, 2920
MaeIII GTNAC 1 cut(s) 3118
MbiI CCGCTC 1 cut(s) 123
MflI RGATCY 4 cut(s) 459, 835, 1207, 2734
MhlI GDGCHC 6 cut(s) 111, 597, 1121, 1799, 2059, 3014
MlyI GAGTC 5 cut(s) 899, 986, 2051, 2590, 2943
MmeI TCCRAC 2 cut(s) 102, 1042
MroXI GAANNNNTTC 1 cut(s) 1494
MslI CAYNNNNRTG 2 cut(s) 1227, 2570
MspA1I CMGCKG 1 cut(s) 181
MspCI CTTAAG 1 cut(s) 2000
MspI CCGG 7 cut(s) 94, 249, 346, 386, 952, 1670, 2346
MspR9I CCNGG 3 cut(s) 347, 2346, 2441
MvaI CCWGG 1 cut(s) 2441
MvnI CGCG 2 cut(s) 72, 201
NciI CCSGG 2 cut(s) 347, 2346
NdeI CATATG 1 cut(s) 2614
NlaIII CATG 7 cut(s) 1257, 1364, 1387, 1469, 1894, 2428, 2800
NmeAIII GCCGAG 1 cut(s) 238
NmuCI GTSAC 1 cut(s) 3118
NspI RCATGY 3 cut(s) 1257, 1469, 1894
OliI CACNNNNGTG 1 cut(s) 2570
PaeI GCATGC 1 cut(s) 1469
PagI TCATGA 1 cut(s) 1360
PaqCI CACCTGC 1 cut(s) 1077
PciI ACATGT 1 cut(s) 1890
PcsI WCGNNNNNNNCGW 1 cut(s) 228
PdmI GAANNNNTTC 1 cut(s) 1494
PfeI GAWTC 9 cut(s) 45, 469, 659, 1176, 1963, 2171, 2714, 2951, 3134
PflMI CCANNNNNTGG 1 cut(s) 1024
Ple19I CGATCG 1 cut(s) 763
PleI GAGTC 5 cut(s) 898, 986, 2050, 2590, 2942
PpsI GAGTC 5 cut(s) 898, 986, 2050, 2590, 2942
Ppu21I YACGTR 1 cut(s) 2921
PscI ACATGT 1 cut(s) 1890
PshBI ATTAAT 3 cut(s) 737, 797, 2286
Psp124BI GAGCTC 2 cut(s) 111, 3014
Psp1406I AACGTT 1 cut(s) 1000
Psp6I CCWGG 1 cut(s) 2439
PspGI CCWGG 1 cut(s) 2439
PspOMI GGGCCC 1 cut(s) 1795
PspPI GGNCC 9 cut(s) 257, 348, 903, 1795, 1796, 2343, 2443, 2488, 3002
PstI CTGCAG 5 cut(s) 1074, 1144, 2433, 2605, 3043
PsuI RGATCY 4 cut(s) 459, 835, 1207, 2734
PvuI CGATCG 1 cut(s) 763
RsaI GTAC 8 cut(s) 475, 846, 933, 959, 2025, 2159, 2512, 2923
RsaNI GTAC 8 cut(s) 474, 845, 932, 958, 2024, 2158, 2511, 2922
RseI CAYNNNNRTG 2 cut(s) 1227, 2570
SacI GAGCTC 2 cut(s) 111, 3014
SalI GTCGAC 1 cut(s) 1257
Sau96I GGNCC 9 cut(s) 257, 348, 903, 1795, 1796, 2343, 2443, 2488, 3002
ScaI AGTACT 1 cut(s) 846
SchI GAGTC 5 cut(s) 899, 986, 2051, 2590, 2943
ScrFI CCNGG 3 cut(s) 347, 2346, 2441
SduI GDGCHC 6 cut(s) 111, 597, 1121, 1799, 2059, 3014
SfaNI GCATC 8 cut(s) 228, 382, 540, 1090, 1219, 1426, 1551, 1861
SfcI CTRYAG 8 cut(s) 558, 894, 1070, 1140, 1149, 2429, 2601, 3039
SgrAI CRCCGGYG 1 cut(s) 248
SinI GGWCC 1 cut(s) 2488
SmiMI CAYNNNNRTG 2 cut(s) 1227, 2570
SmlI CTYRAG 7 cut(s) 545, 851, 1169, 2000, 2528, 2771, 2905
SmoI CTYRAG 7 cut(s) 545, 851, 1169, 2000, 2528, 2771, 2905
SpeI ACTAGT 1 cut(s) 1762
SphI GCATGC 1 cut(s) 1469
SspMI CTAG 9 cut(s) 59, 689, 1211, 1320, 1763, 1926, 2028, 2484, 2846
SstI GAGCTC 2 cut(s) 111, 3014
StyD4I CCNGG 3 cut(s) 345, 2344, 2439
StyI CCWWGG 1 cut(s) 2310
TaaI ACNGT 9 cut(s) 434, 478, 524, 683, 974, 1568, 1879, 2199, 2515
TaiI ACGT 7 cut(s) 502, 1003, 1698, 2335, 2404, 2422, 2923
TaqI TCGA 4 cut(s) 1258, 1356, 1423, 1616
TaqII GACCGA 1 cut(s) 2480
TatI WGTACW 3 cut(s) 844, 957, 2157
TauI GCSGC 3 cut(s) 206, 1676, 2887
TfiI GAWTC 9 cut(s) 45, 469, 659, 1176, 1963, 2171, 2714, 2951, 3134
TseFI GTSAC 1 cut(s) 3118
Tsp45I GTSAC 1 cut(s) 3118
TspGWI ACGGA 1 cut(s) 133
Van91I CCANNNNNTGG 1 cut(s) 1024
Vha464I CTTAAG 1 cut(s) 2000
VneI GTGCAC 1 cut(s) 2055
VpaK11BI GGWCC 1 cut(s) 2488
VspI ATTAAT 3 cut(s) 737, 797, 2286
XagI CCTNNNNNAGG 1 cut(s) 62
XapI RAATTY 5 cut(s) 290, 698, 1481, 2079, 2861
XceI RCATGY 3 cut(s) 1257, 1469, 1894
XmiI GTMKAC 1 cut(s) 1258
XmnI GAANNNNTTC 1 cut(s) 1494
XspI CTAG 9 cut(s) 59, 689, 1211, 1320, 1763, 1926, 2028, 2484, 2846
ZrmI AGTACT 1 cut(s) 846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.