Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0006579

Physical Location & Seq

Genomic Coordinates Forward (+)

18773148 .. 18779068

Gene Structure 5921 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g18180.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3024 bp

ATGGCGGAACCGACGGCGGAAGACGAGAAGCCCTTGATGCTCAAAATCGCTCAAATCTTCGACGACGCTCGGACTTCCAACGCCAGCCACAACCGCAAGCTCAAGGAGCTCTCCGCCCTCCGCTCAAAAACGTCGTCCTCCTCCCTCTTCTTCTCTGCATTCTGCAAAACTCTACTTCCCCTCTTCTCCTTCCAGAGGCGTACTGCCTCGGCCGAACGCATAGTCCGGTTCATCTCCGCCTTTGCAACCGCCCGAGACTCCGGCAATGTCTCCCAATCCGACGCTTTCTTGAAGGACTTCCTCAGGTTCCTTTTACCGGCGTCCTACGCCGCCAACAAGACTTCGAGGTCCCGAGCCTGCCAGATTGTTTCTGAGATCATCGTGCAATTACCAGATGATGCAGAAGTGAGCAGTGATCTCTGGGACGAAGTAATAGATTGTATGAAGTTGTGTGCGGGGGACAAGGTCCCTGTAATCCGTACATGTGCAGTTAGAGCTCTTTCACGTTTTGCAAGTGATTGCGAGAACAGCGATATCCTTGATTTATTTCTTGAGATGCTTCCTGTAGAACAAACTGTGGAGGTTCGGAAGGCAATAGTGTTATCTTTGCCTCCTTCAAATGCAACTGCACAAGCAATCATTGGTTGTACATTAGATGTCAGTGAATCAGTGCGCAAAGCAGCATACCATGTTCTAGCTAGTAAATTTCCTCTTCAAAGTCTGAGTATCAAGCATAGAACATTAATTCTTCAGAGGGGACTTGCTGATCGTTCTGTTGCTGTTTCAAATGAGTGTCTTAAGTTAATGAAAGATGAATGGTTAAATAATTGCTGCAAAGGAGACCCTTTAGAGCTACTCAAGTATCTTGATGTTGAGACCTATGAATTGGTTGGGGAGTCTGTGGCTTGTGCACTGTTAAAAGCTGGTTTGATTAAATTACACGATGGTGAAAGTATTCGGCACTACATATCATCTACGAATGAGAGAATTGAAGAAATTGTGGTTGAACAGGCAAAAGGCTCTGATGCTGCTTCTACAACGGGCACTGAAGCAACAGTATATGCAGCGGAAGCTTCAGACACCAGTGACCTTCTTGAGAAAATTCTGCCAGCAACAATTTCTGATTATATAGATTTAGTCAAAGCTCACATTGATGCTGGTGAGTCAGGACCAAATTATCGCTTTGCATGTCGGCAGCTACTATTGCTTGGTGCAATGCTTGATTTTTCCGATGTTACAAACAGGAAGGTTGCTAGTACGTTTGTGCTGGAATTGCTGAATAAGCCTTTTGACCATGAAGTTGATGAGTATGGAAACATGGTTGTTATTGGAGATGGAATAAATCTTGGTGGTGATAGAGATTGGGCTGAAGCTGTGTTTGGATTAGCAAGCAAGGTGCATGCTGCTAGTGGTGAGTTTGAAGAAGTTGTTCTTGGCGTTGTAGAGGAACTTGCTCGTCCTTGCAGGGAAAGAACAGCGGATTTTCTGCAGTGGATGCACTGCCTTGCTGTTTTCGGCCTTTGCCTGGAGAAGGCAAGGTCATATCATTGGATTCAAGGGAAAGCTATTGAGCCTACTGAACTACTGCAATCTTTATTGCTTCCAGCGGCAAAACATTCTCACTTGGAAGTCCAAAGGATTGCAGCCAGGTGTCTTGGGCTTTTTGGATTGTTAGATAAAAAGCCAAGCCAGGAACTAGTAAAGCAGTTAAAGCTTTCATTTATTAAGGGACCAGCTCCAATTAGCATAGTTGCTTGCAAGGCATTATTTGATCTTGGAATGTGGCATAATCCTCAGGAAGTTGATAGGGTGACAGGCCTGGACATTTCGACACAAGTTCAAGAGTATGATATAACTTCTAGTCCTTTAAACCTTTCTGATACAGATGGGATATCGAACATTAAATTGCTTGATCTTTTGTACGCTGGAATTATGAAAGATGATTGGGACAATTCTCTAGCAAGTGATGAAAATGAATCTGTTCATTCCGCTCTTGGTGAGGGGTTTGCAAAAATTCTTCTTCTAAGTGAGAACTACCAAGGCATGCCTGCTTCTTTACATCCTTTGCTTTTATCGAAGCTCATTACCCTGTACTTCAGCAACGAATCTAAAAACTTGCAGAGGTTGAAACAGTGCTTATCCGTGTTCTTTGAGAATTACCCTTCCCTCGCAGCTAATCACAAGAAGTGTATAGCCAAGGCTTTCATTCCAGTCATGCGTTCTATGTGGCCGGGTATCAATGGCACTGCTGGAGGTTCTGCTTCCGTGGTTTCTAATATGCGTAAGCGTGCAGTCCAAGTATCACATTTTATGCTGCACATCATGCAGGCTCCCTTATATAAAAATAGAGCAGAGGAACAAAGTGATACCGGGGAACTTCCAGAAGTGATAGAAGAACCTCCACTGGAGTGTGGTGAGGAGGGGCTTGCCATACGCATAGCTGCAGAGGTTGCTACTTTCCGTTCAAAGAAGACACCTGCAGAGAAGGCATATGTGTCAGCATTATGCAGAGTACTTGTCATGCTCCATTTCCGGTTATCAGAGCAAGAGGCAATCCAGTTAATGAGGAGGCTTTTAATTCGTGTGGTAGAATCTGCATCAGCAGAGAAGGATCTTCTCAAAGAGTTAAGGCAAATGGCTGACCATCTCAAGGCACAAGATAGGTATCCAGATCAGGAAATGTCGAAAGATCAAGCTAATCTTATATTTGGTAAGTTAGAACTAGGCTTCAACTTGGATTTCAATGTTTCTGTTGAAATGCCGCAGACCCCAGCTCCTCGCTCCACTAAGCCAACCCGTTCTAGAAAACGAGTGACACTTGAAGAGTCATCTTCCGATGATGAAGATAGCTCACCCACCTCCGTTGTCGCTAATAATCTTGGCAGAATAAGCGCTCGCTCACAGAGAGCAAGCAAGACCGCAGCACTATCGAAGATGACTGCTAATGAAACCTTGAAGATCGACGAAGATGATGAAGAGGAAGAAGGCTCGGAGGTTACATCTGATGAAGATGGATCTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04111 map04111

Pfam Domains

Protein Families

Cnd3

Protein Analysis

1008

Amino Acids

111.27

Weight (kDa)

5.25

Isoelectric Point (pI)

45.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006579)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37630
fragaria_vesca	FvH4_1g30230 FvH4_1g30230
malus_domestica	MD09G1270700.v1.1 MD17G1268900.v1.1
prunus_persica	Prupe.3G017700_v2.0.a1 Prupe.3G017700_v2.0.a1
pyrus_communis	pycom09g18180 pycom17g26750 pycom17g26760
rosa_chinensis	RchiOBHm_Chr3g0491161
rosa_laevigata	RLG00000022858
rosa_multiflora	Rmu_co8352689.1_g000001 Rmu_sc0024833.1_g000001 Rmu_ssc0000202.1_g000001
rosa_roxburghii	Rroxscaffold_6G00393110
rosa_rugosa	Rorug03G0246600
rosa_samantha	Rh3AG297000 Rh3AG297100 Rh3BG333000 Rh3BG333100 Rh3CG330100 Rh3CG330200 Rh3DG330700 Rh3DG330800
rosa_wichuraiana	Rw3G026200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2485
AasI	GACNNNNNNGTC	1 cut(s)	346
Acc16I	TGCGCA	1 cut(s)	674
Acc36I	ACCTGC	1 cut(s)	2485
AccBSI	CCGCTC	2 cut(s)	123, 1991
AclWI	GGATC	2 cut(s)	2619, 3022
AcoI	YGGCCR	2 cut(s)	210, 2228
AcsI	RAATTY	3 cut(s)	704, 1101, 2013
AcuI	CTGAAG	5 cut(s)	734, 1059, 1068, 1389, 2080
AcyI	GRCGYC	1 cut(s)	320
AfaI	GTAC	7 cut(s)	202, 481, 649, 1258, 1922, 2093, 2514
AfeI	AGCGCT	1 cut(s)	2893
AfiI	CCNNNNNNNGG	5 cut(s)	195, 316, 1525, 1531, 2650
AflII	CTTAAG	1 cut(s)	797
AflIII	ACRYGT	1 cut(s)	482
AhlI	ACTAGT	1 cut(s)	1696
AjnI	CCWGG	4 cut(s)	1524, 1646, 1689, 1818
AjuI	GAANNNNNNNTTGG	4 cut(s)	1362, 1394, 1416, 1448
AleI	CACNNNNGTG	2 cut(s)	945, 2407
AloI	GAACNNNNNNTCC	2 cut(s)	207, 239
Alw21I	GWGCWC	3 cut(s)	111, 499, 913
Alw26I	GTCTC	4 cut(s)	249, 274, 834, 869
Alw44I	GTGCAC	1 cut(s)	909
AlwI	GGATC	2 cut(s)	2619, 3022
Ama87I	CYCGRG	2 cut(s)	252, 351
Aor51HI	AGCGCT	1 cut(s)	2893
AoxI	GGCC	4 cut(s)	210, 1516, 1816, 2228
ApaLI	GTGCAC	1 cut(s)	909
ApoI	RAATTY	3 cut(s)	704, 1101, 2013
ArsI	GACNNNNNNTTYG	4 cut(s)	119, 151, 207, 239
AseI	ATTAAT	1 cut(s)	743
Asp700I	GAANNNNTTC	4 cut(s)	296, 954, 1428, 1980
AspLEI	GCGC	2 cut(s)	675, 2894
AspS9I	GGNCC	4 cut(s)	348, 466, 1169, 1730
AsuC2I	CCSGG	2 cut(s)	2232, 2371
AsuHPI	GGTGA	8 cut(s)	959, 1172, 1364, 1424, 1822, 2009, 2426, 2844
AvaI	CYCGRG	2 cut(s)	252, 351
AvaII	GGWCC	4 cut(s)	348, 466, 1169, 1730
AxyI	CCTNAGG	2 cut(s)	302, 1794
BaeGI	GKGCMC	2 cut(s)	913, 1046
BaeI	ACNNNNGTAYC	2 cut(s)	845, 878
BanII	GRGCYC	2 cut(s)	111, 499
BbsI	GAAGAC	2 cut(s)	27, 2477
Bbv12I	GWGCWC	3 cut(s)	111, 499, 913
BccI	CCATC	5 cut(s)	938, 1328, 1880, 2652, 3005
BceAI	ACGGC	1 cut(s)	30
BcgI	CGANNNNNNTGC	2 cut(s)	2910, 2944
BciT130I	CCWGG	4 cut(s)	1526, 1648, 1691, 1820
BciVI	GTATCC	1 cut(s)	2676
BcnI	CCSGG	2 cut(s)	2232, 2371
BcoDI	GTCTC	4 cut(s)	249, 274, 834, 869
BcuI	ACTAGT	1 cut(s)	1696
BfaI	CTAG	9 cut(s)	695, 699, 1254, 1407, 1697, 1860, 1958, 2723, 2802
BfmI	CTRYAG	4 cut(s)	564, 1487, 2442, 2478
BfoI	RGCGCY	1 cut(s)	2895
BfrI	CTTAAG	1 cut(s)	797
BfuAI	ACCTGC	1 cut(s)	2485
BfuI	GTATCC	1 cut(s)	2676
BmcAI	AGTACT	1 cut(s)	2514
Bme1390I	CCNGG	6 cut(s)	1526, 1648, 1691, 1820, 2232, 2371
Bme18I	GGWCC	4 cut(s)	348, 466, 1169, 1730
BmeT110I	CYCGRG	2 cut(s)	252, 351
BmgT120I	GGNCC	4 cut(s)	348, 466, 1169, 1730
BmiI	GGNNCC	6 cut(s)	9, 308, 350, 468, 1731, 2331
BmrFI	CCNGG	6 cut(s)	1526, 1648, 1691, 1820, 2232, 2371
BmsI	GCATC	7 cut(s)	27, 388, 546, 1015, 1144, 1485, 2606
BpiI	GAAGAC	2 cut(s)	27, 2477
BpmI	CTGGAG	3 cut(s)	1547, 2271, 2426
BpuEI	CTTGAG	5 cut(s)	86, 572, 842, 1115, 2633
BpuMI	CCSGG	2 cut(s)	2232, 2371
BsaBI	GATNNNNATC	1 cut(s)	2664
BsaHI	GRCGYC	1 cut(s)	320
BsaI	GGTCTC	2 cut(s)	834, 869
BsaJI	CCNNGG	5 cut(s)	207, 2038, 2196, 2265, 2370
BsaWI	WCCGGW	2 cut(s)	225, 2532
BsaXI	ACNNNNNCTCC	2 cut(s)	2758, 2788
Bsc4I	CCNNNNNNNGG	5 cut(s)	195, 316, 1525, 1531, 2650
Bse118I	RCCGGY	1 cut(s)	316
Bse1I	ACTGG	4 cut(s)	1083, 2210, 2409, 2557
Bse21I	CCTNAGG	2 cut(s)	302, 1794
Bse3DI	GCAATG	2 cut(s)	271, 1221
Bse8I	GATNNNNATC	1 cut(s)	2664
BseBI	CCWGG	4 cut(s)	1526, 1648, 1691, 1820
BseDI	CCNNGG	5 cut(s)	207, 2038, 2196, 2265, 2370
BseGI	GGATG	2 cut(s)	1500, 2059
BseJI	GATNNNNATC	1 cut(s)	2664
BseLI	CCNNNNNNNGG	5 cut(s)	195, 316, 1525, 1531, 2650
BseMI	GCAATG	2 cut(s)	271, 1221
BseMII	CTCAG	4 cut(s)	316, 363, 713, 1808
BseNI	ACTGG	4 cut(s)	1083, 2210, 2409, 2557
BseRI	GAGGAG	4 cut(s)	130, 2432, 2581, 2766
BseSI	GKGCMC	2 cut(s)	913, 1046
BseX3I	CGGCCG	1 cut(s)	210
BseYI	CCCAGC	1 cut(s)	2770
BsgI	GTGCAG	4 cut(s)	507, 612, 2300, 2310
Bsh1285I	CGRYCG	1 cut(s)	213
BshFI	GGCC	4 cut(s)	212, 1518, 1818, 2230
BsiEI	CGRYCG	1 cut(s)	213
BsiHKAI	GWGCWC	3 cut(s)	111, 499, 913
BsiHKCI	CYCGRG	2 cut(s)	252, 351
BsiSI	CCGG	6 cut(s)	226, 261, 317, 2231, 2370, 2533
BslFI	GGGAC	7 cut(s)	334, 437, 452, 473, 771, 1743, 1961
BslI	CCNNNNNNNGG	5 cut(s)	195, 316, 1525, 1531, 2650
BsmAI	GTCTC	4 cut(s)	249, 274, 834, 869
BsmFI	GGGAC	7 cut(s)	334, 437, 452, 473, 771, 1743, 1961
BsmI	GAATGC	1 cut(s)	158
BsnI	GGCC	4 cut(s)	212, 1518, 1818, 2230
Bso31I	GGTCTC	2 cut(s)	834, 869
BsoBI	CYCGRG	2 cut(s)	252, 351
Bsp1286I	GDGCHC	4 cut(s)	111, 499, 913, 1046
Bsp1407I	TGTACA	1 cut(s)	647
BspANI	GGCC	4 cut(s)	212, 1518, 1818, 2230
BspCNI	CTCAG	4 cut(s)	315, 364, 714, 1807
BspLI	GGNNCC	6 cut(s)	9, 308, 350, 468, 1731, 2331
BspMAI	CTGCAG	3 cut(s)	1491, 2446, 2482
BspMI	ACCTGC	1 cut(s)	2485
BspPI	GGATC	2 cut(s)	2619, 3022
BspTI	CTTAAG	1 cut(s)	797
BspTNI	GGTCTC	2 cut(s)	834, 869
BsrBI	CCGCTC	2 cut(s)	123, 1991
BsrDI	GCAATG	2 cut(s)	271, 1221
BsrFI	RCCGGY	1 cut(s)	316
BsrGI	TGTACA	1 cut(s)	647
BsrI	ACTGG	4 cut(s)	1083, 2210, 2409, 2557
BssAI	RCCGGY	1 cut(s)	316
BssECI	CCNNGG	5 cut(s)	207, 2038, 2196, 2265, 2370
BssNI	GRCGYC	1 cut(s)	320
BssT1I	CCWWGG	2 cut(s)	2038, 2196
Bst2UI	CCWGG	4 cut(s)	1526, 1648, 1691, 1820
Bst4CI	ACNGT	4 cut(s)	577, 915, 1057, 2133
Bst6I	CTCTTC	5 cut(s)	152, 188, 717, 2817, 2970
BstACI	GRCGYC	1 cut(s)	320
BstAFI	CTTAAG	1 cut(s)	797
BstAPI	GCANNNNNTGC	3 cut(s)	1495, 2323, 2450
BstAUI	TGTACA	1 cut(s)	647
BstDEI	CTNAG	6 cut(s)	302, 372, 722, 1794, 2024, 2787
BstDSI	CCRYGG	1 cut(s)	2265
BstENI	CCTNNNNNAGG	2 cut(s)	193, 1529
BstF5I	GGATG	2 cut(s)	1500, 2059
BstH2I	RGCGCY	1 cut(s)	2895
BstHHI	GCGC	2 cut(s)	675, 2894
BstMAI	GTCTC	4 cut(s)	249, 274, 834, 869
BstMCI	CGRYCG	1 cut(s)	213
BstNI	CCWGG	4 cut(s)	1526, 1648, 1691, 1820
BstNSI	RCATGY	4 cut(s)	486, 1191, 1403, 2047
BstSCI	CCNGG	6 cut(s)	1524, 1646, 1689, 1818, 2230, 2369
BstSFI	CTRYAG	4 cut(s)	564, 1487, 2442, 2478
BstSLI	GKGCMC	2 cut(s)	913, 1046
BstV2I	GAAGAC	2 cut(s)	27, 2477
BstX2I	RGATCY	2 cut(s)	2611, 3014
BstYI	RGATCY	2 cut(s)	2611, 3014
BstZI	CGGCCG	1 cut(s)	210
Bsu36I	CCTNAGG	2 cut(s)	302, 1794
BsuI	GTATCC	1 cut(s)	2676
BsuRI	GGCC	4 cut(s)	212, 1518, 1818, 2230
BtgI	CCRYGG	1 cut(s)	2265
BtsCI	GGATG	2 cut(s)	1500, 2059
BtsI	GCAGTG	4 cut(s)	418, 1496, 1498, 2244
BveI	ACCTGC	1 cut(s)	2485
CfoI	GCGC	2 cut(s)	675, 2894
Cfr10I	RCCGGY	1 cut(s)	316
Cfr13I	GGNCC	4 cut(s)	348, 466, 1169, 1730
CseI	GACGC	3 cut(s)	74, 290, 309
Csp6I	GTAC	7 cut(s)	201, 480, 648, 1257, 1921, 2092, 2513
CspCI	CAANNNNNGTGG	2 cut(s)	2845, 2880
CviQI	GTAC	7 cut(s)	201, 480, 648, 1257, 1921, 2092, 2513
DdeI	CTNAG	6 cut(s)	302, 372, 722, 1794, 2024, 2787
DraI	TTTAAA	1 cut(s)	1869
DrdI	GACNNNNNNGTC	1 cut(s)	346
DseDI	GACNNNNNNGTC	1 cut(s)	346
EaeI	YGGCCR	2 cut(s)	210, 2228
EagI	CGGCCG	1 cut(s)	210
Eam1104I	CTCTTC	5 cut(s)	152, 188, 717, 2817, 2970
EarI	CTCTTC	5 cut(s)	152, 188, 717, 2817, 2970
EciI	GGCGGA	4 cut(s)	20, 32, 103, 226
Ecl136II	GAGCTC	2 cut(s)	109, 497
EclXI	CGGCCG	1 cut(s)	210
Eco130I	CCWWGG	2 cut(s)	2038, 2196
Eco147I	AGGCCT	1 cut(s)	1818
Eco24I	GRGCYC	2 cut(s)	111, 499
Eco31I	GGTCTC	2 cut(s)	834, 869
Eco32I	GATATC	2 cut(s)	535, 1893
Eco47I	GGWCC	4 cut(s)	348, 466, 1169, 1730
Eco47III	AGCGCT	1 cut(s)	2893
Eco52I	CGGCCG	1 cut(s)	210
Eco53kI	GAGCTC	2 cut(s)	109, 497
Eco57I	CTGAAG	5 cut(s)	734, 1059, 1068, 1389, 2080
Eco81I	CCTNAGG	2 cut(s)	302, 1794
Eco88I	CYCGRG	2 cut(s)	252, 351
EcoICRI	GAGCTC	2 cut(s)	109, 497
EcoNI	CCTNNNNNAGG	2 cut(s)	193, 1529
EcoO109I	RGGNCCY	2 cut(s)	348, 466
EcoRII	CCWGG	4 cut(s)	1524, 1646, 1689, 1818
EcoRV	GATATC	2 cut(s)	535, 1893
EcoT14I	CCWWGG	2 cut(s)	2038, 2196
EcoT38I	GRGCYC	2 cut(s)	111, 499
ErhI	CCWWGG	2 cut(s)	2038, 2196
FalI	AAGNNNNNCTT	4 cut(s)	1416, 1448, 2685, 2717
FaqI	GGGAC	7 cut(s)	334, 437, 452, 473, 771, 1743, 1961
FauI	CCCGC	1 cut(s)	448
FauNDI	CATATG	1 cut(s)	2491
FokI	GGATG	2 cut(s)	1507, 2046
FriOI	GRGCYC	2 cut(s)	111, 499
FspBI	CTAG	9 cut(s)	695, 699, 1254, 1407, 1697, 1860, 1958, 2723, 2802
FspI	TGCGCA	1 cut(s)	674
GlaI	GCGC	2 cut(s)	674, 2893
GsaI	CCCAGC	1 cut(s)	2774
GsuI	CTGGAG	3 cut(s)	1547, 2271, 2426
HaeII	RGCGCY	1 cut(s)	2895
HaeIII	GGCC	4 cut(s)	212, 1518, 1818, 2230
HapII	CCGG	6 cut(s)	226, 261, 317, 2231, 2370, 2533
HgaI	GACGC	3 cut(s)	74, 290, 309
HhaI	GCGC	2 cut(s)	675, 2894
Hin1I	GRCGYC	1 cut(s)	320
Hin6I	GCGC	2 cut(s)	673, 2892
HinP1I	GCGC	2 cut(s)	673, 2892
HindIII	AAGCTT	2 cut(s)	1071, 1712
HinfI	GANTC	9 cut(s)	257, 665, 896, 1163, 1552, 1976, 2105, 2591, 2825
HpaII	CCGG	6 cut(s)	226, 261, 317, 2231, 2370, 2533
HphI	GGTGA	8 cut(s)	959, 1172, 1364, 1424, 1822, 2009, 2426, 2844
Hpy166II	GTNNAC	1 cut(s)	911
Hpy8I	GTNNAC	1 cut(s)	911
Hpy99I	CGWCG	6 cut(s)	16, 65, 68, 136, 284, 2966
HpyCH4III	ACNGT	4 cut(s)	577, 915, 1057, 2133
HpyCH4IV	ACGT	3 cut(s)	131, 505, 1259
HpyF3I	CTNAG	6 cut(s)	302, 372, 722, 1794, 2024, 2787
HpySE526I	ACGT	3 cut(s)	131, 505, 1259
Hsp92I	GRCGYC	1 cut(s)	320
HspAI	GCGC	2 cut(s)	673, 2892
LmnI	GCTCC	6 cut(s)	106, 1741, 2335, 2529, 2779, 2786
LweI	GCATC	7 cut(s)	27, 388, 546, 1015, 1144, 1485, 2606
MaeI	CTAG	9 cut(s)	695, 699, 1254, 1407, 1697, 1860, 1958, 2723, 2802
MaeII	ACGT	3 cut(s)	131, 505, 1259
MaeIII	GTNAC	5 cut(s)	1085, 1234, 1810, 2812, 2995
MbiI	CCGCTC	2 cut(s)	123, 1991
MflI	RGATCY	2 cut(s)	2611, 3014
MhlI	GDGCHC	4 cut(s)	111, 499, 913, 1046
MlyI	GAGTC	4 cut(s)	251, 905, 1172, 2834
MmeI	TCCRAC	2 cut(s)	102, 303
MroXI	GAANNNNTTC	4 cut(s)	296, 954, 1428, 1980
MslI	CAYNNNNRTG	3 cut(s)	945, 1152, 2407
MspA1I	CMGCKG	3 cut(s)	1067, 1478, 1607
MspCI	CTTAAG	1 cut(s)	797
MspI	CCGG	6 cut(s)	226, 261, 317, 2231, 2370, 2533
MspR9I	CCNGG	6 cut(s)	1526, 1648, 1691, 1820, 2232, 2371
Mva1269I	GAATGC	1 cut(s)	158
MvaI	CCWGG	4 cut(s)	1526, 1648, 1691, 1820
NciI	CCSGG	2 cut(s)	2232, 2371
NdeI	CATATG	1 cut(s)	2491
NlaIV	GGNNCC	6 cut(s)	9, 308, 350, 468, 1731, 2331
NmeAIII	GCCGAG	1 cut(s)	188
NmuCI	GTSAC	3 cut(s)	1085, 1810, 2812
NsbI	TGCGCA	1 cut(s)	674
NspI	RCATGY	4 cut(s)	486, 1191, 1403, 2047
OliI	CACNNNNGTG	2 cut(s)	945, 2407
PaeI	GCATGC	2 cut(s)	1403, 2047
PaqCI	CACCTGC	1 cut(s)	2485
PceI	AGGCCT	1 cut(s)	1818
PciI	ACATGT	1 cut(s)	482
PctI	GAATGC	1 cut(s)	158
PdmI	GAANNNNTTC	4 cut(s)	296, 954, 1428, 1980
PfeI	GAWTC	5 cut(s)	665, 1552, 1976, 2105, 2591
PflFI	GACNNNGTC	1 cut(s)	464
PleI	GAGTC	4 cut(s)	251, 904, 1171, 2833
PpsI	GAGTC	4 cut(s)	251, 904, 1171, 2833
PpuMI	RGGWCCY	2 cut(s)	348, 466
PscI	ACATGT	1 cut(s)	482
PshBI	ATTAAT	1 cut(s)	743
Psp124BI	GAGCTC	2 cut(s)	111, 499
Psp5II	RGGWCCY	2 cut(s)	348, 466
Psp6I	CCWGG	4 cut(s)	1524, 1646, 1689, 1818
PspFI	CCCAGC	1 cut(s)	2770
PspGI	CCWGG	4 cut(s)	1524, 1646, 1689, 1818
PspN4I	GGNNCC	6 cut(s)	9, 308, 350, 468, 1731, 2331
PspPI	GGNCC	4 cut(s)	348, 466, 1169, 1730
PspPPI	RGGWCCY	2 cut(s)	348, 466
PstI	CTGCAG	3 cut(s)	1491, 2446, 2482
PsuI	RGATCY	2 cut(s)	2611, 3014
PsyI	GACNNNGTC	1 cut(s)	464
RsaI	GTAC	7 cut(s)	202, 481, 649, 1258, 1922, 2093, 2514
RsaNI	GTAC	7 cut(s)	201, 480, 648, 1257, 1921, 2092, 2513
RseI	CAYNNNNRTG	3 cut(s)	945, 1152, 2407
SacI	GAGCTC	2 cut(s)	111, 499
Sau96I	GGNCC	4 cut(s)	348, 466, 1169, 1730
ScaI	AGTACT	1 cut(s)	2514
SchI	GAGTC	4 cut(s)	251, 905, 1172, 2834
ScrFI	CCNGG	6 cut(s)	1526, 1648, 1691, 1820, 2232, 2371
SduI	GDGCHC	4 cut(s)	111, 499, 913, 1046
SfaNI	GCATC	7 cut(s)	27, 388, 546, 1015, 1144, 1485, 2606
SfcI	CTRYAG	4 cut(s)	564, 1487, 2442, 2478
SinI	GGWCC	4 cut(s)	348, 466, 1169, 1730
SmiMI	CAYNNNNRTG	3 cut(s)	945, 1152, 2407
SmlI	CTYRAG	6 cut(s)	101, 551, 797, 857, 1094, 2648
SmoI	CTYRAG	6 cut(s)	101, 551, 797, 857, 1094, 2648
SpeI	ACTAGT	1 cut(s)	1696
SphI	GCATGC	2 cut(s)	1403, 2047
SseBI	AGGCCT	1 cut(s)	1818
SspMI	CTAG	9 cut(s)	695, 699, 1254, 1407, 1697, 1860, 1958, 2723, 2802
SstI	GAGCTC	2 cut(s)	111, 499
StuI	AGGCCT	1 cut(s)	1818
StyD4I	CCNGG	6 cut(s)	1524, 1646, 1689, 1818, 2230, 2369
StyI	CCWWGG	2 cut(s)	2038, 2196
TaaI	ACNGT	4 cut(s)	577, 915, 1057, 2133
TaiI	ACGT	3 cut(s)	134, 508, 1262
TaqI	TCGA	8 cut(s)	60, 344, 1829, 1895, 2075, 2684, 2930, 2961
TatI	WGTACW	3 cut(s)	647, 2091, 2512
TauI	GCSGC	3 cut(s)	332, 1610, 2764
TfiI	GAWTC	5 cut(s)	665, 1552, 1976, 2105, 2591
TseFI	GTSAC	3 cut(s)	1085, 1810, 2812
Tsp45I	GTSAC	3 cut(s)	1085, 1810, 2812
TspGWI	ACGGA	5 cut(s)	467, 2131, 2254, 2450, 2851
Tth111I	GACNNNGTC	1 cut(s)	464
Vha464I	CTTAAG	1 cut(s)	797
VneI	GTGCAC	1 cut(s)	909
VpaK11BI	GGWCC	4 cut(s)	348, 466, 1169, 1730
VspI	ATTAAT	1 cut(s)	743
XagI	CCTNNNNNAGG	2 cut(s)	193, 1529
XapI	RAATTY	3 cut(s)	704, 1101, 2013
XbaI	TCTAGA	1 cut(s)	2801
XceI	RCATGY	4 cut(s)	486, 1191, 1403, 2047
XmnI	GAANNNNTTC	4 cut(s)	296, 954, 1428, 1980
XspI	CTAG	9 cut(s)	695, 699, 1254, 1407, 1697, 1860, 1958, 2723, 2802
ZrmI	AGTACT	1 cut(s)	2514

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.