RLG00000022858

Condensin complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0006579
Physical Location & Seq
Forward (+)
13416734 .. 13425221
8488 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022858

Sequence Viewer

Length: 3105 bp
ATGGAGAAAGCCACAGACGAAGAAGAGAAGCCTGTAATGCTCAGAATCGCTCAAATCCTAGACGAGGCTCGCGCCTCCAACGCCATCCACAACCGAAAATGCAAGGAGCTCTACGCCCTCCGCTCCAAAACGGCGTCGTCTTCCGTCTTCTTCGCATCCTTCTGCAAAACCCTACTCCCGCTGTTCGCCTTCCAGAGACGCGCCGCCTCCGCCGAGCGCATCGTTCGCTTCATCTCCGCCTTCGCCACCGGCAGAGACCCTGACCAAAGCGACGCTGCTTTCTTGGATGAATTCCTCAGGTTCCTTTTGACTGCTTCCACTGCTTCTAATCGGACGGCGAGGTTCCGGGCCTGCCAGATTATTTCGGAGATCATTATGCAATTACCGGATGATGCAGAAGTAAGCAGTGAACTTTGGGATGAAGTAATAGACTGTATGATGTTGCGTGCGGGGGACAAGATCCCTGTGATTCGTACAGTTGCAGTTAGGGCGCTTTCACGTTTTGCAAGTGATTGCGAGAACAGTGATATCGTTGATTTATTTCTTGAGATGCTTCCTGTAGAACAAATTGTGGAGGTTCGGAAGACAATAGTGCTCTCTCTACCTCCTTCAAATGCAACCGCACAAGCAATCATTGATTGCACATTAGATGTCAGCGAATCAGTGCGAAAAGCAGCATATTGTGTTCTAGCCAGTAAATTTCCTCTTCAAAGCCTCAGTATCAAGCATAGAACATTAATTCTTCGGAGGGGACTTGCCGATCGTTCTCTTGCTGTTTCAAAGGAGTGTCTTAAATTAATGAAAGATGAATGGCTAAACAAGTGCTGCAATGGAGAACCTTTAGTACTTCTCAAGTATCTTGATGTGGAAACCTATGAAATGGTCGGGGAGTATGTAGCAGGGGCCTTGTTAAAGGGTGGTGAAATTAGAGTTCCTGAAGGTGAAAGTATCCGGCAGTACATATTGTCTAACAGTGAAAGAGCTGAAGAAGACTCAGAACGTAGCACACCAAACATCCAACTGATGGAAGCGGAGGTTGCACTTTACTGGAGGATGATATGTAGGCACCTGCAGATTGAGGCACAAGAGAAAGGCTCTGATGCTGCTTCTACTATGGGCACCGAGGCAGCAGTATATGCTGCAGAAGCTACAGACAACAATGACCTTCTAGAGAGAATCCTGCCAGCAACAATTTCTGATTATATAGATTTAGTCAAATCTCACATTGATGCTGGTTCCAATTATCGCTTTGCATGTCGACAGCTACTATTGCTTGGTGCAATGCTTGATTTTTCGGATACATCAAACAGGAAGGTTGCTAGTACATTTGTGCTGGAACTGCTCCATAAGCCTTTCGATCATGAAGTAGATGAGTATGGGAACATGGTTGTTATAGGAGATGGAATAAATCTTGGTGGTGATCGAGATTGGTCTGATGCGGTGTATGGGTTGGCAAGCAAGGTGCATGCTGCCAGTGGTGAATTTGAAGAAGTTGTTCTTAGGGTTGTAGAGGAGCTCGCTCTCCCTTGCAGGGAGAGAACAGCAGATTTTATGCAGTGGATGCACTGTCTTGCTGTTTTTGGCCTTTGCTTAGAGAAGGCAAAGTCACATCAGTCGATCCAAGGGAGAGCTATTGAAACTGTTGAACTACTGCAATCTCTGTTGCTTCCGGCGGCAAAACATTCTCACTTGGACGTGCAGAGGATTGCAGTTAGGTGCCTCGGGCTTTTTGGATTGTTAGAGAAAAGGCCAAGTGAGGAACTAGTAAAGCAGTTAAAGCTTTCTTTTGTTAAGGGCCCTGCTCCAATTAGCATTGTGGCTTGTAAGGCATTGTTTGATCTTGGGATGTGGCATCAGCCTCAGGAAGTTGATAGGACTGTGGGTCAGAACATGTCATCGCAATTTCAAGACTATGGGATGACTTCTAGTCCCTTAAACATTTCTGATATGGATGGGAACTCGAATCTTAAATTGCTTGATCTTTTGTATGCTGGACTTCTTAAGGATGATTGGGACAATTCTGTAGCTAGTGAAGACAATGAGTCTGTTCAAGGTGCTCTTGGGGAGGGCTTTGCAAAAATTCTTCTTCTAAGTGAGAATTACCAAAGCATACCTGCTTGTTTAAATCCTTTGCTTTTATCCAAGCTCATTACCTTGTACTTCAGCAATGAATCTAAGGAGTTGCAGAGGTTGAAACAGTGCTTATCTGTGTTCTTTGAGCATTACCCTTCCCTCTCGGCCAATCACAAGAAGTGTATATCCAACGCTTTCATTCCTGTCACGCGCTCTATGTGGCCCAGTATCAATGGCAATGCTGGAGGTTCTGCATCTGTGGTGTCTAATATGCGTAAACGTGCTGTCCAAGTATCACGTTTCATGCTGCAGATGATCCAGGCTCCTCTATATGCAAAGGAGACCAAGGATGATAGAAACAGAAGGGACCAACCAGAAGTTATAGATGGTACCGTGGAACCTCCACTTGAGAGTGGGGAGGAAGGGCTTGCAATACGCATAGCCACTGAGGTGGCAGCCTTCCCTACAAAGAAGACTCCCGCAGAGAGGTCATATGTGTCAGCACTATGTAGAATACTTGTTTTACTCCAATTTCGGGTATCAGAGCAAGGAGCAATCCAGTTAATGAGGAGGCTTTTAGTTCGTGTGGCTGAATCTGTATTGGCAGAGAAAGATCTTGTGAAGGAGTTGAGGCGAATGGCTGACCGTCTCAAGGCATTAGATAAACATCCTGACCTGGAAATATCACAAGATCAAGCTAATCTTATATTTGGAAGGTTAGAACTAGACTTCGACTTGGAATCCAATATATCTGCTGAAATGCCGCAAACACCAGCTCCTTGCTCAAGCAGACCAACACGTACCAGAAGACGAGTCAGGCAAGAGGAGGAATCTTCTGATGAAGATGGTTCGCCCACCTCTGTTGTTCCTAATAGTGTTGGCCCTATGAGCTCTCGTTCACAGAGAGCAAGCAAGACTGCAGCACTGACCAAGATAACGACTGCCATTACAGCCCCCACGATTGATGAAGATGATGAAGAGGAAGAAAGCTCAGGGGTGACATCTGATGACGATTCTGATGGCTCTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04111 map04111
Pfam Domains
Protein Families
Cnd3

Protein Analysis

1035

Amino Acids

114.94

Weight (kDa)

5.11

Isoelectric Point (pI)

50.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cnd3 PF12719 522 - 869 1.8e-53 Nuclear condensing complex subunits, C-term domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1077
Acc36I ACCTGC 2 cut(s) 1077, 2122
Acc65I GGTACC 1 cut(s) 2462
AccB1I GGYRCC 4 cut(s) 1065, 1118, 1716, 2462
AccB7I CCANNNNNTGG 1 cut(s) 1024
AccBSI CCGCTC 1 cut(s) 123
AccI GTMKAC 1 cut(s) 1258
AccII CGCG 3 cut(s) 72, 201, 2284
AclWI GGATC 3 cut(s) 454, 1612, 2383
AcoI YGGCCR 1 cut(s) 2238
AcsI RAATTY 4 cut(s) 290, 698, 1481, 2079
AcuI CTGAAG 3 cut(s) 957, 1005, 2146
AcyI GRCGYC 1 cut(s) 134
AfaI GTAC 7 cut(s) 475, 846, 959, 1324, 2159, 2464, 2875
AfiI CCNNNNNNNGG 6 cut(s) 64, 1024, 1531, 2559, 2608, 2725
AflII CTTAAG 1 cut(s) 2000
AflIII ACRYGT 2 cut(s) 1890, 2870
AgsI TTSAA 9 cut(s) 612, 710, 780, 1487, 1637, 1646, 1907, 2051, 2194
AhdI GACNNNNNGTC 3 cut(s) 1881, 1926, 2041
AhlI ACTAGT 1 cut(s) 1762
AjiI CACGTC 1 cut(s) 1696
AjnI CCWGG 2 cut(s) 2391, 2748
AleI CACNNNNGTG 1 cut(s) 2522
Alw21I GWGCWC 5 cut(s) 111, 597, 1518, 2059, 2966
Alw26I GTCTC 4 cut(s) 190, 249, 2408, 2726
AlwI GGATC 3 cut(s) 454, 1612, 2383
Ama87I CYCGRG 1 cut(s) 1721
AoxI GGCC 8 cut(s) 348, 903, 1582, 1748, 1795, 2238, 2294, 2953
ApaI GGGCCC 1 cut(s) 1799
ApoI RAATTY 4 cut(s) 290, 698, 1481, 2079
AseI ATTAAT 2 cut(s) 737, 797
Asp700I GAANNNNTTC 1 cut(s) 1494
Asp718I GGTACC 1 cut(s) 2462
AspLEI GCGC 5 cut(s) 74, 203, 219, 493, 2286
AspS9I GGNCC 7 cut(s) 348, 903, 1795, 1796, 2295, 2440, 2954
AsuC2I CCSGG 1 cut(s) 347
AsuHPI GGTGA 5 cut(s) 932, 953, 1430, 1490, 3082
AvaI CYCGRG 1 cut(s) 1721
AvaII GGWCC 1 cut(s) 2440
AxyI CCTNAGG 2 cut(s) 296, 1860
BaeGI GKGCMC 2 cut(s) 1121, 1799
BanI GGYRCC 4 cut(s) 1065, 1118, 1716, 2462
BanII GRGCYC 4 cut(s) 111, 1518, 1799, 2966
BbsI GAAGAC 7 cut(s) 132, 139, 590, 996, 2040, 2552, 2887
Bbv12I GWGCWC 5 cut(s) 111, 597, 1518, 2059, 2966
BccI CCATC 7 cut(s) 92, 1018, 1394, 1946, 2453, 2912, 3086
BceAI ACGGC 2 cut(s) 147, 351
BciT130I CCWGG 2 cut(s) 2393, 2750
BciVI GTATCC 2 cut(s) 959, 1291
BcnI CCSGG 1 cut(s) 347
BcoDI GTCTC 4 cut(s) 190, 249, 2408, 2726
BcuI ACTAGT 1 cut(s) 1762
BfaI CTAG 8 cut(s) 59, 689, 1169, 1320, 1763, 1926, 2028, 2798
BfmI CTRYAG 7 cut(s) 558, 1070, 1140, 1149, 2022, 2381, 2991
BfoI RGCGCY 1 cut(s) 494
BfrI CTTAAG 1 cut(s) 2000
BfuAI ACCTGC 2 cut(s) 1077, 2122
BfuI GTATCC 2 cut(s) 959, 1291
BglII AGATCT 1 cut(s) 2686
BmcAI AGTACT 1 cut(s) 846
Bme1390I CCNGG 3 cut(s) 347, 2393, 2750
Bme18I GGWCC 1 cut(s) 2440
BmeRI GACNNNNNGTC 3 cut(s) 1881, 1926, 2041
BmeT110I CYCGRG 1 cut(s) 1721
BmgBI CACGTC 1 cut(s) 1696
BmgT120I GGNCC 7 cut(s) 348, 903, 1795, 1796, 2295, 2440, 2954
BmrFI CCNGG 3 cut(s) 347, 2393, 2750
BmrI ACTGGG 1 cut(s) 2292
BmuI ACTGGG 1 cut(s) 2292
BpiI GAAGAC 7 cut(s) 132, 139, 590, 996, 2040, 2552, 2887
BplI GAGNNNNNCTC 2 cut(s) 1079, 1111
BpmI CTGGAG 2 cut(s) 1069, 2337
Bpu10I CCTNAGC 1 cut(s) 3064
BpuEI CTTGAG 5 cut(s) 566, 836, 2501, 2708, 2842
BpuMI CCSGG 1 cut(s) 347
BsaAI YACGTR 1 cut(s) 2873
BsaBI GATNNNNATC 1 cut(s) 2739
BsaHI GRCGYC 1 cut(s) 134
BsaI GGTCTC 2 cut(s) 249, 2408
BsaJI CCNNGG 5 cut(s) 1122, 1621, 1720, 2418, 2466
BsaWI WCCGGW 1 cut(s) 385
BsaXI ACNNNNNCTCC 2 cut(s) 2833, 2863
Bsc4I CCNNNNNNNGG 6 cut(s) 64, 1024, 1531, 2559, 2608, 2725
Bse118I RCCGGY 1 cut(s) 248
Bse1I ACTGG 5 cut(s) 693, 1052, 1473, 2298, 2632
Bse21I CCTNAGG 2 cut(s) 296, 1860
Bse3DI GCAATG 4 cut(s) 835, 1287, 2173, 2317
Bse8I GATNNNNATC 1 cut(s) 2739
BseBI CCWGG 2 cut(s) 2393, 2750
BseDI CCNNGG 5 cut(s) 1122, 1621, 1720, 2418, 2466
BseJI GATNNNNATC 1 cut(s) 2739
BseLI CCNNNNNNNGG 6 cut(s) 64, 1024, 1531, 2559, 2608, 2725
BseMI GCAATG 4 cut(s) 835, 1287, 2173, 2317
BseMII CTCAG 7 cut(s) 55, 310, 730, 1008, 1874, 2511, 3078
BseNI ACTGG 5 cut(s) 693, 1052, 1473, 2298, 2632
BseRI GAGGAG 4 cut(s) 1526, 2388, 2656, 2912
BseSI GKGCMC 2 cut(s) 1121, 1799
BsgI GTGCAG 1 cut(s) 1718
Bsh1236I CGCG 3 cut(s) 72, 201, 2284
Bsh1285I CGRYCG 1 cut(s) 763
BshFI GGCC 8 cut(s) 350, 905, 1584, 1750, 1797, 2240, 2296, 2955
BshNI GGYRCC 4 cut(s) 1065, 1118, 1716, 2462
BsiEI CGRYCG 1 cut(s) 763
BsiHKAI GWGCWC 5 cut(s) 111, 597, 1518, 2059, 2966
BsiHKCI CYCGRG 1 cut(s) 1721
BsiSI CCGG 5 cut(s) 249, 346, 386, 952, 1670
BslFI GGGAC 5 cut(s) 467, 765, 1914, 2027, 2453
BslI CCNNNNNNNGG 6 cut(s) 64, 1024, 1531, 2559, 2608, 2725
BsmAI GTCTC 4 cut(s) 190, 249, 2408, 2726
BsmBI CGTCTC 2 cut(s) 190, 2726
BsmFI GGGAC 5 cut(s) 467, 765, 1914, 2027, 2453
BsnI GGCC 8 cut(s) 350, 905, 1584, 1750, 1797, 2240, 2296, 2955
Bso31I GGTCTC 2 cut(s) 249, 2408
BsoBI CYCGRG 1 cut(s) 1721
Bsp120I GGGCCC 1 cut(s) 1795
Bsp1286I GDGCHC 7 cut(s) 111, 597, 1121, 1518, 1799, 2059, 2966
BspANI GGCC 8 cut(s) 350, 905, 1584, 1750, 1797, 2240, 2296, 2955
BspCNI CTCAG 7 cut(s) 54, 309, 729, 1007, 1873, 2512, 3077
BspFNI CGCG 3 cut(s) 72, 201, 2284
BspHI TCATGA 1 cut(s) 1360
BspMAI CTGCAG 4 cut(s) 1074, 1144, 2385, 2995
BspMI ACCTGC 2 cut(s) 1077, 2122
BspPI GGATC 3 cut(s) 454, 1612, 2383
BspT107I GGYRCC 4 cut(s) 1065, 1118, 1716, 2462
BspTI CTTAAG 1 cut(s) 2000
BspTNI GGTCTC 2 cut(s) 249, 2408
BsrBI CCGCTC 1 cut(s) 123
BsrDI GCAATG 4 cut(s) 835, 1287, 2173, 2317
BsrFI RCCGGY 1 cut(s) 248
BsrI ACTGG 5 cut(s) 693, 1052, 1473, 2298, 2632
BssAI RCCGGY 1 cut(s) 248
BssECI CCNNGG 5 cut(s) 1122, 1621, 1720, 2418, 2466
BssNI GRCGYC 1 cut(s) 134
BssT1I CCWWGG 2 cut(s) 1621, 2418
Bst2UI CCWGG 2 cut(s) 2393, 2750
Bst6I CTCTTC 3 cut(s) 18, 711, 3045
BstACI GRCGYC 1 cut(s) 134
BstAFI CTTAAG 1 cut(s) 2000
BstAPI GCANNNNNTGC 2 cut(s) 1136, 1561
BstBAI YACGTR 1 cut(s) 2873
BstC8I GCNNGC 9 cut(s) 70, 352, 447, 1185, 1456, 1467, 1518, 2502, 2983
BstDSI CCRYGG 1 cut(s) 2466
BstENI CCTNNNNNAGG 1 cut(s) 62
BstFNI CGCG 3 cut(s) 72, 201, 2284
BstH2I RGCGCY 1 cut(s) 494
BstHHI GCGC 5 cut(s) 74, 203, 219, 493, 2286
BstMAI GTCTC 4 cut(s) 190, 249, 2408, 2726
BstMCI CGRYCG 1 cut(s) 763
BstNI CCWGG 2 cut(s) 2393, 2750
BstNSI RCATGY 3 cut(s) 1257, 1469, 1894
BstSCI CCNGG 3 cut(s) 345, 2391, 2748
BstSFI CTRYAG 7 cut(s) 558, 1070, 1140, 1149, 2022, 2381, 2991
BstSLI GKGCMC 2 cut(s) 1121, 1799
BstUI CGCG 3 cut(s) 72, 201, 2284
BstV2I GAAGAC 7 cut(s) 132, 139, 590, 996, 2040, 2552, 2887
BstX2I RGATCY 2 cut(s) 459, 2686
BstXI CCANNNNNNTGG 1 cut(s) 2524
BstYI RGATCY 2 cut(s) 459, 2686
Bsu36I CCTNAGG 2 cut(s) 296, 1860
BsuI GTATCC 2 cut(s) 959, 1291
BsuRI GGCC 8 cut(s) 350, 905, 1584, 1750, 1797, 2240, 2296, 2955
BtgI CCRYGG 1 cut(s) 2466
BtgZI GCGATG 1 cut(s) 1881
BtrI CACGTC 1 cut(s) 1696
BtsI GCAGTG 3 cut(s) 318, 412, 1562
BveI ACCTGC 2 cut(s) 1077, 2122
Cac8I GCNNGC 9 cut(s) 70, 352, 447, 1185, 1456, 1467, 1518, 2502, 2983
CciI TCATGA 1 cut(s) 1360
CfoI GCGC 5 cut(s) 74, 203, 219, 493, 2286
Cfr10I RCCGGY 1 cut(s) 248
Cfr13I GGNCC 7 cut(s) 348, 903, 1795, 1796, 2295, 2440, 2954
CseI GACGC 3 cut(s) 123, 207, 281
Csp6I GTAC 7 cut(s) 474, 845, 958, 1323, 2158, 2463, 2874
CspCI CAANNNNNGTGG 2 cut(s) 2917, 2952
CviAII CATG 6 cut(s) 1254, 1361, 1384, 1466, 1891, 2377
CviQI GTAC 7 cut(s) 474, 845, 958, 1323, 2158, 2463, 2874
DraI TTTAAA 1 cut(s) 2124
DriI GACNNNNNGTC 3 cut(s) 1881, 1926, 2041
EaeI YGGCCR 1 cut(s) 2238
Eam1104I CTCTTC 3 cut(s) 18, 711, 3045
Eam1105I GACNNNNNGTC 3 cut(s) 1881, 1926, 2041
EarI CTCTTC 3 cut(s) 18, 711, 3045
EciI GGCGGA 2 cut(s) 199, 226
Ecl136II GAGCTC 3 cut(s) 109, 1516, 2964
Eco130I CCWWGG 2 cut(s) 1621, 2418
Eco24I GRGCYC 4 cut(s) 111, 1518, 1799, 2966
Eco31I GGTCTC 2 cut(s) 249, 2408
Eco32I GATATC 1 cut(s) 529
Eco47I GGWCC 1 cut(s) 2440
Eco53kI GAGCTC 3 cut(s) 109, 1516, 2964
Eco57I CTGAAG 3 cut(s) 957, 1005, 2146
Eco81I CCTNAGG 2 cut(s) 296, 1860
Eco88I CYCGRG 1 cut(s) 1721
EcoICRI GAGCTC 3 cut(s) 109, 1516, 2964
EcoNI CCTNNNNNAGG 1 cut(s) 62
EcoO109I RGGNCCY 3 cut(s) 903, 1795, 1796
EcoRI GAATTC 1 cut(s) 290
EcoRII CCWGG 2 cut(s) 2391, 2748
EcoRV GATATC 1 cut(s) 529
EcoT14I CCWWGG 2 cut(s) 1621, 2418
EcoT38I GRGCYC 4 cut(s) 111, 1518, 1799, 2966
ErhI CCWWGG 2 cut(s) 1621, 2418
Esp3I CGTCTC 2 cut(s) 190, 2726
FaeI CATG 6 cut(s) 1257, 1364, 1387, 1469, 1894, 2380
FalI AAGNNNNNCTT 6 cut(s) 1482, 1514, 2043, 2075, 2760, 2792
FaqI GGGAC 5 cut(s) 467, 765, 1914, 2027, 2453
FatI CATG 6 cut(s) 1253, 1360, 1383, 1465, 1890, 2376
FauI CCCGC 3 cut(s) 186, 442, 2560
FauNDI CATATG 1 cut(s) 2566
FblI GTMKAC 1 cut(s) 1258
FriOI GRGCYC 4 cut(s) 111, 1518, 1799, 2966
FspBI CTAG 8 cut(s) 59, 689, 1169, 1320, 1763, 1926, 2028, 2798
GlaI GCGC 5 cut(s) 73, 202, 218, 492, 2285
GsuI CTGGAG 2 cut(s) 1069, 2337
HaeII RGCGCY 1 cut(s) 494
HaeIII GGCC 8 cut(s) 350, 905, 1584, 1750, 1797, 2240, 2296, 2955
HapII CCGG 5 cut(s) 249, 346, 386, 952, 1670
HgaI GACGC 3 cut(s) 123, 207, 281
HhaI GCGC 5 cut(s) 74, 203, 219, 493, 2286
Hin1I GRCGYC 1 cut(s) 134
Hin1II CATG 6 cut(s) 1257, 1364, 1387, 1469, 1894, 2380
Hin6I GCGC 5 cut(s) 72, 201, 217, 491, 2284
HinP1I GCGC 5 cut(s) 72, 201, 217, 491, 2284
HincII GTYRAC 1 cut(s) 1259
HindII GTYRAC 1 cut(s) 1259
HindIII AAGCTT 1 cut(s) 1778
HpaII CCGG 5 cut(s) 249, 346, 386, 952, 1670
HphI GGTGA 5 cut(s) 932, 953, 1430, 1490, 3082
Hpy166II GTNNAC 4 cut(s) 410, 1259, 2351, 2972
Hpy8I GTNNAC 4 cut(s) 410, 1259, 2351, 2972
Hpy99I CGWCG 2 cut(s) 139, 275
HpyCH4IV ACGT 6 cut(s) 499, 1000, 1695, 2353, 2371, 2872
HpySE526I ACGT 6 cut(s) 499, 1000, 1695, 2353, 2371, 2872
Hsp92I GRCGYC 1 cut(s) 134
Hsp92II CATG 6 cut(s) 1257, 1364, 1387, 1469, 1894, 2380
HspAI GCGC 5 cut(s) 72, 201, 217, 491, 2284
KpnI GGTACC 1 cut(s) 2466
LmnI GCTCC 8 cut(s) 106, 128, 1347, 1513, 1807, 2401, 2624, 2854
MaeI CTAG 8 cut(s) 59, 689, 1169, 1320, 1763, 1926, 2028, 2798
MaeII ACGT 6 cut(s) 499, 1000, 1695, 2353, 2371, 2872
MaeIII GTNAC 3 cut(s) 1605, 2278, 3070
MbiI CCGCTC 1 cut(s) 123
MflI RGATCY 2 cut(s) 459, 2686
MhlI GDGCHC 7 cut(s) 111, 597, 1121, 1518, 1799, 2059, 2966
MlyI GAGTC 4 cut(s) 986, 2051, 2542, 2895
MmeI TCCRAC 3 cut(s) 102, 1042, 2286
MroXI GAANNNNTTC 1 cut(s) 1494
MslI CAYNNNNRTG 2 cut(s) 1227, 2522
MspA1I CMGCKG 1 cut(s) 181
MspCI CTTAAG 1 cut(s) 2000
MspI CCGG 5 cut(s) 249, 346, 386, 952, 1670
MspR9I CCNGG 3 cut(s) 347, 2393, 2750
MvaI CCWGG 2 cut(s) 2393, 2750
MvnI CGCG 3 cut(s) 72, 201, 2284
NciI CCSGG 1 cut(s) 347
NdeI CATATG 1 cut(s) 2566
NlaIII CATG 6 cut(s) 1257, 1364, 1387, 1469, 1894, 2380
NmeAIII GCCGAG 2 cut(s) 238, 2216
NmuCI GTSAC 3 cut(s) 1605, 2278, 3070
NspI RCATGY 3 cut(s) 1257, 1469, 1894
OliI CACNNNNGTG 1 cut(s) 2522
PaeI GCATGC 1 cut(s) 1469
PagI TCATGA 1 cut(s) 1360
PaqCI CACCTGC 1 cut(s) 1077
PciI ACATGT 1 cut(s) 1890
PdmI GAANNNNTTC 1 cut(s) 1494
PflMI CCANNNNNTGG 1 cut(s) 1024
Ple19I CGATCG 1 cut(s) 763
PleI GAGTC 4 cut(s) 986, 2050, 2542, 2894
PpsI GAGTC 4 cut(s) 986, 2050, 2542, 2894
Ppu21I YACGTR 1 cut(s) 2873
PscI ACATGT 1 cut(s) 1890
PshBI ATTAAT 2 cut(s) 737, 797
Psp124BI GAGCTC 3 cut(s) 111, 1518, 2966
Psp6I CCWGG 2 cut(s) 2391, 2748
PspGI CCWGG 2 cut(s) 2391, 2748
PspOMI GGGCCC 1 cut(s) 1795
PspPI GGNCC 7 cut(s) 348, 903, 1795, 1796, 2295, 2440, 2954
PsrI GAACNNNNNNTAC 2 cut(s) 828, 860
PstI CTGCAG 4 cut(s) 1074, 1144, 2385, 2995
PsuI RGATCY 2 cut(s) 459, 2686
PvuI CGATCG 1 cut(s) 763
RsaI GTAC 7 cut(s) 475, 846, 959, 1324, 2159, 2464, 2875
RsaNI GTAC 7 cut(s) 474, 845, 958, 1323, 2158, 2463, 2874
RseI CAYNNNNRTG 2 cut(s) 1227, 2522
SacI GAGCTC 3 cut(s) 111, 1518, 2966
SalI GTCGAC 1 cut(s) 1257
Sau96I GGNCC 7 cut(s) 348, 903, 1795, 1796, 2295, 2440, 2954
ScaI AGTACT 1 cut(s) 846
SchI GAGTC 4 cut(s) 986, 2051, 2542, 2895
ScrFI CCNGG 3 cut(s) 347, 2393, 2750
SduI GDGCHC 7 cut(s) 111, 597, 1121, 1518, 1799, 2059, 2966
SfcI CTRYAG 7 cut(s) 558, 1070, 1140, 1149, 2022, 2381, 2991
SinI GGWCC 1 cut(s) 2440
SmiMI CAYNNNNRTG 2 cut(s) 1227, 2522
SmlI CTYRAG 6 cut(s) 545, 851, 2000, 2480, 2723, 2857
SmoI CTYRAG 6 cut(s) 545, 851, 2000, 2480, 2723, 2857
SpeI ACTAGT 1 cut(s) 1762
SphI GCATGC 1 cut(s) 1469
SspMI CTAG 8 cut(s) 59, 689, 1169, 1320, 1763, 1926, 2028, 2798
SstI GAGCTC 3 cut(s) 111, 1518, 2966
StyD4I CCNGG 3 cut(s) 345, 2391, 2748
StyI CCWWGG 2 cut(s) 1621, 2418
TaiI ACGT 6 cut(s) 502, 1003, 1698, 2356, 2374, 2875
TaqI TCGA 6 cut(s) 1258, 1356, 1423, 1616, 1961, 2805
TatI WGTACW 4 cut(s) 844, 957, 1322, 2157
TauI GCSGC 3 cut(s) 206, 1676, 2839
TseFI GTSAC 3 cut(s) 1605, 2278, 3070
Tsp45I GTSAC 3 cut(s) 1605, 2278, 3070
TspGWI ACGGA 1 cut(s) 133
Van91I CCANNNNNTGG 1 cut(s) 1024
Vha464I CTTAAG 1 cut(s) 2000
VpaK11BI GGWCC 1 cut(s) 2440
VspI ATTAAT 2 cut(s) 737, 797
XagI CCTNNNNNAGG 1 cut(s) 62
XapI RAATTY 4 cut(s) 290, 698, 1481, 2079
XbaI TCTAGA 1 cut(s) 1168
XceI RCATGY 3 cut(s) 1257, 1469, 1894
XmiI GTMKAC 1 cut(s) 1258
XmnI GAANNNNTTC 1 cut(s) 1494
XspI CTAG 8 cut(s) 59, 689, 1169, 1320, 1763, 1926, 2028, 2798
ZrmI AGTACT 1 cut(s) 846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.