Condensin complex subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G37630 |
| fragaria_vesca | FvH4_1g30230 FvH4_1g30230 |
| malus_domestica | MD09G1270700.v1.1 MD17G1268900.v1.1 |
| prunus_persica | Prupe.3G017700_v2.0.a1 Prupe.3G017700_v2.0.a1 |
| pyrus_communis | pycom09g18180 pycom17g26750 pycom17g26760 |
| rosa_chinensis | RchiOBHm_Chr3g0491161 |
| rosa_laevigata | RLG00000022858 |
| rosa_multiflora | Rmu_co8352689.1_g000001 Rmu_sc0024833.1_g000001 Rmu_ssc0000202.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00393110 |
| rosa_rugosa | Rorug03G0246600 |
| rosa_samantha | Rh3AG297000 Rh3AG297100 Rh3BG333000 Rh3BG333100 Rh3CG330100 Rh3CG330200 Rh3DG330700 Rh3DG330800 |
| rosa_wichuraiana | Rw3G026200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 277 |
| AcsI | RAATTY | 1 cut(s) | 234 |
| AfaI | GTAC | 2 cut(s) | 180, 314 |
| AflII | CTTAAG | 1 cut(s) | 155 |
| AflIII | ACRYGT | 1 cut(s) | 45 |
| AgsI | TTSAA | 4 cut(s) | 62, 118, 206, 349 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 36, 81 |
| AluBI | AGCT | 1 cut(s) | 301 |
| AluI | AGCT | 1 cut(s) | 301 |
| Alw21I | GWGCWC | 1 cut(s) | 214 |
| Alw44I | GTGCAC | 1 cut(s) | 210 |
| ApaLI | GTGCAC | 1 cut(s) | 210 |
| ApoI | RAATTY | 1 cut(s) | 234 |
| AxyI | CCTNAGG | 1 cut(s) | 15 |
| BaeGI | GKGCMC | 1 cut(s) | 214 |
| Bbv12I | GWGCWC | 1 cut(s) | 214 |
| BccI | CCATC | 1 cut(s) | 101 |
| BfaI | CTAG | 2 cut(s) | 81, 183 |
| BfrI | CTTAAG | 1 cut(s) | 155 |
| BfuAI | ACCTGC | 1 cut(s) | 277 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 36, 81 |
| BmsI | GCATC | 1 cut(s) | 16 |
| Bse21I | CCTNAGG | 1 cut(s) | 15 |
| Bse3DI | GCAATG | 1 cut(s) | 328 |
| BseGI | GGATG | 3 cut(s) | 78, 112, 166 |
| BseMI | GCAATG | 1 cut(s) | 328 |
| BseMII | CTCAG | 1 cut(s) | 29 |
| BseSI | GKGCMC | 1 cut(s) | 214 |
| BsiHKAI | GWGCWC | 1 cut(s) | 214 |
| BslFI | GGGAC | 1 cut(s) | 182 |
| BsmFI | GGGAC | 1 cut(s) | 182 |
| Bsp1286I | GDGCHC | 1 cut(s) | 214 |
| Bsp143I | GATC | 1 cut(s) | 133 |
| BspCNI | CTCAG | 1 cut(s) | 28 |
| BspMI | ACCTGC | 1 cut(s) | 277 |
| BspTI | CTTAAG | 1 cut(s) | 155 |
| BsrDI | GCAATG | 1 cut(s) | 328 |
| BssMI | GATC | 1 cut(s) | 133 |
| Bst4CI | ACNGT | 2 cut(s) | 34, 354 |
| Bst6I | CTCTTC | 1 cut(s) | 183 |
| BstAFI | CTTAAG | 1 cut(s) | 155 |
| BstDEI | CTNAG | 3 cut(s) | 15, 245, 330 |
| BstF5I | GGATG | 3 cut(s) | 78, 112, 166 |
| BstKTI | GATC | 1 cut(s) | 136 |
| BstMBI | GATC | 1 cut(s) | 133 |
| BstNSI | RCATGY | 1 cut(s) | 49 |
| BstSLI | GKGCMC | 1 cut(s) | 214 |
| Bsu36I | CCTNAGG | 1 cut(s) | 15 |
| BtsCI | GGATG | 3 cut(s) | 78, 112, 166 |
| BtsIMutI | CAGTG | 1 cut(s) | 359 |
| BveI | ACCTGC | 1 cut(s) | 277 |
| Csp6I | GTAC | 2 cut(s) | 179, 313 |
| CviAII | CATG | 1 cut(s) | 46 |
| CviJI | RGCY | 2 cut(s) | 225, 301 |
| CviKI_1 | RGCY | 2 cut(s) | 225, 301 |
| CviQI | GTAC | 2 cut(s) | 179, 313 |
| DdeI | CTNAG | 3 cut(s) | 15, 245, 330 |
| DpnI | GATC | 1 cut(s) | 135 |
| DpnII | GATC | 1 cut(s) | 133 |
| DraI | TTTAAA | 1 cut(s) | 279 |
| DriI | GACNNNNNGTC | 2 cut(s) | 36, 81 |
| Eam1104I | CTCTTC | 1 cut(s) | 183 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 36, 81 |
| EarI | CTCTTC | 1 cut(s) | 183 |
| Eco81I | CCTNAGG | 1 cut(s) | 15 |
| FaeI | CATG | 1 cut(s) | 49 |
| FaiI | YATR | 5 cut(s) | 47, 69, 104, 144, 266 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 198, 230 |
| FaqI | GGGAC | 1 cut(s) | 182 |
| FatI | CATG | 1 cut(s) | 45 |
| FokI | GGATG | 3 cut(s) | 85, 119, 173 |
| FspBI | CTAG | 2 cut(s) | 81, 183 |
| Hin1II | CATG | 1 cut(s) | 49 |
| HinfI | GANTC | 3 cut(s) | 118, 197, 326 |
| Hpy166II | GTNNAC | 1 cut(s) | 212 |
| Hpy188I | TCNGA | 2 cut(s) | 42, 100 |
| Hpy188III | TCNNGA | 2 cut(s) | 17, 62 |
| Hpy8I | GTNNAC | 1 cut(s) | 212 |
| HpyCH4III | ACNGT | 2 cut(s) | 34, 354 |
| HpyCH4V | TGCA | 3 cut(s) | 212, 230, 340 |
| HpyF3I | CTNAG | 3 cut(s) | 15, 245, 330 |
| Hsp92II | CATG | 1 cut(s) | 49 |
| Kzo9I | GATC | 1 cut(s) | 133 |
| LpnPI | CCDG | 3 cut(s) | 2, 132, 282 |
| LweI | GCATC | 1 cut(s) | 16 |
| MaeI | CTAG | 2 cut(s) | 81, 183 |
| MalI | GATC | 1 cut(s) | 135 |
| MboI | GATC | 1 cut(s) | 133 |
| MboII | GAAGA | 2 cut(s) | 200, 230 |
| MhlI | GDGCHC | 1 cut(s) | 214 |
| MluCI | AATT | 5 cut(s) | 56, 125, 172, 234, 253 |
| MlyI | GAGTC | 1 cut(s) | 206 |
| MnlI | CCTC | 3 cut(s) | 24, 214, 336 |
| MseI | TTAA | 3 cut(s) | 123, 156, 278 |
| MspCI | CTTAAG | 1 cut(s) | 155 |
| NdeII | GATC | 1 cut(s) | 133 |
| NlaIII | CATG | 1 cut(s) | 49 |
| NspI | RCATGY | 1 cut(s) | 49 |
| PciI | ACATGT | 1 cut(s) | 45 |
| PfeI | GAWTC | 2 cut(s) | 118, 326 |
| PleI | GAGTC | 1 cut(s) | 205 |
| PpsI | GAGTC | 1 cut(s) | 205 |
| PscI | ACATGT | 1 cut(s) | 45 |
| RsaI | GTAC | 2 cut(s) | 180, 314 |
| RsaNI | GTAC | 2 cut(s) | 179, 313 |
| SaqAI | TTAA | 3 cut(s) | 123, 156, 278 |
| Sau3AI | GATC | 1 cut(s) | 133 |
| SchI | GAGTC | 1 cut(s) | 206 |
| SduI | GDGCHC | 1 cut(s) | 214 |
| SetI | ASST | 7 cut(s) | 16, 184, 211, 271, 303, 311, 347 |
| SfaNI | GCATC | 1 cut(s) | 16 |
| SmlI | CTYRAG | 1 cut(s) | 155 |
| SmoI | CTYRAG | 1 cut(s) | 155 |
| Sse9I | AATT | 5 cut(s) | 56, 125, 172, 234, 253 |
| SspMI | CTAG | 2 cut(s) | 81, 183 |
| TaaI | ACNGT | 2 cut(s) | 34, 354 |
| TasI | AATT | 5 cut(s) | 56, 125, 172, 234, 253 |
| TatI | WGTACW | 1 cut(s) | 312 |
| TfiI | GAWTC | 2 cut(s) | 118, 326 |
| Tru1I | TTAA | 3 cut(s) | 123, 156, 278 |
| Tru9I | TTAA | 3 cut(s) | 123, 156, 278 |
| TscAI | CASTG | 1 cut(s) | 359 |
| TspDTI | ATGAA | 1 cut(s) | 339 |
| TspRI | CASTG | 1 cut(s) | 359 |
| Vha464I | CTTAAG | 1 cut(s) | 155 |
| VneI | GTGCAC | 1 cut(s) | 210 |
| XapI | RAATTY | 1 cut(s) | 234 |
| XceI | RCATGY | 1 cut(s) | 49 |
| XspI | CTAG | 2 cut(s) | 81, 183 |