RchiOBHm_Chr3g0491161

Condensin complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0006579
Physical Location & Seq
Reverse (-)
37935873 .. 37945079
9207 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ45417

Sequence Viewer

Length: 3099 bp
ATGGAGAAAGCCACAGACGAAGAAGAGAAGCCTGTAATGCTCAGAATCGCTCAAATCCTAGACGAGGCTCGCGCCTCCAACGCCATCCACAACCGGAAATGCAAGGAGCTCTACGCCCTCCGCTCCAAAACGGCGTCGTCTTCCGTCTTCTTCACATCCTTCTGCAAAACCCTGCTCCCGCTGTTCGCCTTCCAGAGACGCGCCGCCTCCGCCGAGCGCATCGTTCGCTTCGTCTCCTCCTTCGCCACCGGCAGAGACCCTGGCCAAAGCGACGCTGCTTTCTTGGATGAATTCCTCAGGTTCCTTTTGACTGCTTCTACTGCTTCTAATCGGACGGCAAGGTTCCGGGCCTGCCAGATTATTTCTGAGATCATTATGCAATTACCGGATGATGCAGAAGTAAGCAGTGAACTTTGGGATGAAGTAATAGACTGTATGATGTTGCGTGCGGGGGACAAGATCCCTGTGATTCGTACAGTTGCAGTTAGGGCGCTTTCACGTTTTGCAAGTGATTGTGAGAACAGTGATATCGTTGATTTATTTCTTGAGATGCTTCCTGTAGAACAAATTGTGGAGGTTCGGAAGACAATAGTGCTCTCTCTACCTCCTTCAAATGCAACAGCACAAGCAATCATTGATTGCACATTAGATGTCAGTGAATCAGTGCGAAAAGCAGCATACTGTGTTCTAGCCAGTAAATTTCCTCTTCAAAGCCTCAGTATCAAGCATAGAACATTAATTCTTCGGAGGGGACTTGCCGATCGTTCTCTTGCTGTTTCAAAGGAGTGTCTTAAATTAATGAAAGATGAATGGCTGAACAAGTGCTGCAATGGAGATCCTTTAGTACTTCTCAAGTATCTTGATGTGGAAACCTATGAAATGGTCGGGGAGTCTGTAGCAGGGGCCTTGTTAAAAGGTGGTGAAATTAGAGTACCTGAAGGTGAAAGTATCCGGCAGTACATATTGTCTAACAGTGAAAGAGCTGAAGAAGACTCAGAACGTTGCACACCAAACATCCAACTGATGGAAGCGGAGGTTGCACTTTACTGGAGGATGATATGCAGGCACCTGCAGATGGAGGCACAAGAGAAAGGCTCTGATGCTGCTTCTACTATGGGCACCGAGGCAGCAGTGTATGCTGCAGAAGCTACAGACAACAATGACCTTCTTGAGAGAATCCTGCCAGCAACAATTTCTGATTATATAGATCTAGTCAAATCTCACATTGATGCTGGTTCCAATTATCGCTTTGCATGTCGACAGCTACTATTGCTTGGTGCAATGCTTGATTTTTCGGATACATCAAACAGGAAGGTTGCTAGTACATTTGTGCTGGAACTGCTCCATAAGCCTTTCGATCATGAAGTAGATGAGTATGGGAACATGGTTGTTATAGGAGATGGAATAAATCTTGGTGGTGATCGAGATTGGTCTGATGCGGTGTATGGGTTGGCAAGCAAGGTGCATGCTGCCAGTGGTGAATTTGAAGAAGTTGTTCTTAGGGTTGTAGAGGAGCTCGCTCTCCCTTGCAGGGAGAGAACAGCAGATTTTATGCAGTGGATGCACTGTCTTGCTGTTTTTGGCCTTTGCTTAGAGAAGGCAAAATCACATCAGTCGATCAAAGGGAGAGCTATTGAACCTGTTGAACTACTGCAATCTCTGTTGCTTCCGGCGGCAAAACATTCTCACTTGGACGTGCAGAGGATTGCAGTTAGGTGCCTCGGGCTTTTTGGGTTGTTAGAGAAAAGGCCAAGTGAGGAACTAGTAAAGCAGTTAAAGCTTTCTTTTGTTAAGGGCCCTGCTCCAATTAGCATAGTGGCTTGTAAGGCATTGTTTGATCTTGGGATGTGGCATCAACCTCAGGAAGTTGATAGGACTGTGGGTCAGAACATGACATCGCAATTTCAAGACTATGGGATGACTTCTAGTCCCTTAGACATTTCTGATATGGATGGGAACTTGAATCTTAAATTGCTTGATCTTTTGTATGCTGGACTTCTTAAGGATGATTGGGACAATTCTGTACCTAGTGAAGAGAATGAGTCTGTTCAAGGTGCACTTGGGGAGGGCTTTGCAAAAATTCTTCTCCTAAGTGAGAATTACCAAAGCATACCTACTTGTTTAAATCCTTTGCTTTTATCCAAGCTCATTACCTTGTACTTCAGCAATGAATCTAAGGAGTTGCAGAGTGCTTATCTGTGTTCTTTGAGCATTACCCTTCCCTCTCGGCCAATCACAAGGAAAAAGTGTATATCCAAGGCTTTCATTCCTGTCACATGTTCTATGTGGCCCGGTGTCAATGGCAATGCTGGAGGTTCTGCGTCTGTGGTGTCTAATATGCGTAAACGTGCAGTCCAAGTATCACGTTTCATGCTGCAGATGATCCAGGCCCCTCTATATGCAAAGGCGACCGAGGATGACAGAAACACTAGGGACCAACCAGAAGTTATCGATGGTACCGTGGAACCTCCACTTGAGAGTGGGGAGGAAGGGCTTGCAATACGCATAGCCACAGAGGTGGCAGCCTTCCCTACAAAGAAGACTCCTGCAGAGAGGTCATATGTGTCAGCACTATGTAGAATACTTGTTTTACTCCAATTTCGGGTATCAGAGCAAGAAGCAATCCAGTTAATGAGGAGGCTTTTAGTTCGTGTGGCTGAATCTGTATTGGCAGAGAAAGATCTTGTGAAGGAGTTGAGGCGAATGGCTGACAGTCTCAAGGCATTAGATAAACATCCTGACCTGGAAATATCACAAGATCAAGCTAATCTTATATTTGGAAGGTTAGAACTAGACTTCAACTTGGAATCCAATATATCTGCTGAAATGCCGCAAACACCAGCTCCTTGCTCAAGCAGACCAACACGTACCAGAAGACGAGTCAGGCAAGAGGAGGAATCTTCTGATGAAGATAGTTCGCCCACCTCTGTTGTTCCTAATAGTGTTGGCCCTATGAGCTCTCGTTCACAGAGAGCAAGCAAGACTGCAGCACTGACCAAGATAACGACTGCCATTACAGCCCCCACGATTGATGAAGATGATGAAGAGGAAGAAAGCTCAGGGGTGACATCTGATGACGATTCTGATGGCTCTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04111 map04111
Pfam Domains
Protein Families
Cnd3

Protein Analysis

1032

Amino Acids

114.4

Weight (kDa)

5.05

Isoelectric Point (pI)

49.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cnd3 PF12719 522 - 867 6.2e-39 Nuclear condensing complex subunits, C-term domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1077
Acc36I ACCTGC 1 cut(s) 1077
Acc65I GGTACC 1 cut(s) 2456
AccB1I GGYRCC 4 cut(s) 1065, 1118, 1716, 2456
AccB7I CCANNNNNTGG 1 cut(s) 1024
AccBSI CCGCTC 1 cut(s) 123
AccI GTMKAC 1 cut(s) 1258
AccII CGCG 2 cut(s) 72, 201
AciI CCGC 9 cut(s) 121, 179, 204, 210, 449, 1031, 1439, 1673, 2831
AclI AACGTT 1 cut(s) 1000
AclWI GGATC 3 cut(s) 454, 830, 2377
AcoI YGGCCR 2 cut(s) 262, 2228
AcsI RAATTY 4 cut(s) 290, 698, 1481, 2079
AcuI CTGAAG 3 cut(s) 957, 1005, 2146
AcyI GRCGYC 1 cut(s) 134
AfaI GTAC 9 cut(s) 475, 846, 933, 959, 1324, 2025, 2159, 2458, 2869
AfiI CCNNNNNNNGG 5 cut(s) 64, 1024, 1075, 1531, 2602
AflII CTTAAG 1 cut(s) 2000
AflIII ACRYGT 2 cut(s) 2276, 2864
AhdI GACNNNNNGTC 2 cut(s) 1881, 1926
AhlI ACTAGT 1 cut(s) 1762
AjiI CACGTC 1 cut(s) 1696
AjnI CCWGG 3 cut(s) 259, 2385, 2742
AleI CACNNNNGTG 1 cut(s) 2516
Alw21I GWGCWC 5 cut(s) 111, 597, 1518, 2059, 2960
Alw26I GTCTC 4 cut(s) 190, 238, 249, 2720
Alw44I GTGCAC 1 cut(s) 2055
AlwI GGATC 3 cut(s) 454, 830, 2377
Ama87I CYCGRG 1 cut(s) 1721
ApaI GGGCCC 1 cut(s) 1799
ApaLI GTGCAC 1 cut(s) 2055
ApoI RAATTY 4 cut(s) 290, 698, 1481, 2079
AseI ATTAAT 2 cut(s) 737, 797
Asp700I GAANNNNTTC 1 cut(s) 1494
Asp718I GGTACC 1 cut(s) 2456
AspLEI GCGC 4 cut(s) 74, 203, 219, 493
AspS9I GGNCC 8 cut(s) 348, 903, 1795, 1796, 2289, 2389, 2434, 2948
AsuC2I CCSGG 2 cut(s) 347, 2292
AsuHPI GGTGA 5 cut(s) 932, 953, 1430, 1490, 3076
AvaI CYCGRG 1 cut(s) 1721
AvaII GGWCC 1 cut(s) 2434
AxyI CCTNAGG 2 cut(s) 296, 1860
BaeGI GKGCMC 3 cut(s) 1121, 1799, 2059
BalI TGGCCA 1 cut(s) 264
BanI GGYRCC 4 cut(s) 1065, 1118, 1716, 2456
BanII GRGCYC 4 cut(s) 111, 1518, 1799, 2960
BbsI GAAGAC 6 cut(s) 132, 139, 590, 996, 2546, 2881
Bbv12I GWGCWC 5 cut(s) 111, 597, 1518, 2059, 2960
BccI CCATC 7 cut(s) 92, 1018, 1069, 1394, 1946, 2447, 3080
BceAI ACGGC 2 cut(s) 147, 351
BciT130I CCWGG 3 cut(s) 261, 2387, 2744
BciVI GTATCC 2 cut(s) 959, 1291
BcnI CCSGG 2 cut(s) 347, 2292
BcoDI GTCTC 4 cut(s) 190, 238, 249, 2720
BcuI ACTAGT 1 cut(s) 1762
BfaI CTAG 9 cut(s) 59, 689, 1211, 1320, 1763, 1926, 2028, 2430, 2792
BfmI CTRYAG 8 cut(s) 558, 894, 1070, 1140, 1149, 2375, 2547, 2985
BfoI RGCGCY 1 cut(s) 494
BfrI CTTAAG 1 cut(s) 2000
BfuAI ACCTGC 1 cut(s) 1077
BfuI GTATCC 2 cut(s) 959, 1291
BglII AGATCT 2 cut(s) 1207, 2680
BmcAI AGTACT 1 cut(s) 846
Bme1390I CCNGG 5 cut(s) 261, 347, 2292, 2387, 2744
Bme18I GGWCC 1 cut(s) 2434
BmeRI GACNNNNNGTC 2 cut(s) 1881, 1926
BmeT110I CYCGRG 1 cut(s) 1721
BmgBI CACGTC 1 cut(s) 1696
BmgT120I GGNCC 8 cut(s) 348, 903, 1795, 1796, 2289, 2389, 2434, 2948
BmrFI CCNGG 5 cut(s) 261, 347, 2292, 2387, 2744
BmsI GCATC 8 cut(s) 228, 382, 540, 1090, 1219, 1426, 1551, 1861
BpiI GAAGAC 6 cut(s) 132, 139, 590, 996, 2546, 2881
BplI GAGNNNNNCTC 2 cut(s) 1079, 1111
BpmI CTGGAG 2 cut(s) 1069, 2331
Bpu10I CCTNAGC 1 cut(s) 3058
BpuEI CTTGAG 6 cut(s) 566, 836, 1190, 2495, 2702, 2836
BpuMI CCSGG 2 cut(s) 347, 2292
Bsa29I ATCGAT 1 cut(s) 2451
BsaAI YACGTR 1 cut(s) 2867
BsaBI GATNNNNATC 1 cut(s) 2733
BsaHI GRCGYC 1 cut(s) 134
BsaI GGTCTC 1 cut(s) 249
BsaJI CCNNGG 6 cut(s) 259, 1122, 1720, 2256, 2412, 2460
BsaWI WCCGGW 2 cut(s) 93, 385
BsaXI ACNNNNNCTCC 2 cut(s) 2827, 2857
Bsc4I CCNNNNNNNGG 5 cut(s) 64, 1024, 1075, 1531, 2602
Bse118I RCCGGY 1 cut(s) 248
Bse1I ACTGG 4 cut(s) 693, 1052, 1473, 2626
Bse21I CCTNAGG 2 cut(s) 296, 1860
Bse3DI GCAATG 4 cut(s) 835, 1287, 2173, 2311
Bse8I GATNNNNATC 1 cut(s) 2733
BseBI CCWGG 3 cut(s) 261, 2387, 2744
BseCI ATCGAT 1 cut(s) 2451
BseDI CCNNGG 6 cut(s) 259, 1122, 1720, 2256, 2412, 2460
BseJI GATNNNNATC 1 cut(s) 2733
BseLI CCNNNNNNNGG 5 cut(s) 64, 1024, 1075, 1531, 2602
BseMI GCAATG 4 cut(s) 835, 1287, 2173, 2311
BseMII CTCAG 7 cut(s) 55, 310, 357, 730, 1008, 1874, 3072
BseNI ACTGG 4 cut(s) 693, 1052, 1473, 2626
BseRI GAGGAG 4 cut(s) 226, 1526, 2650, 2906
BseSI GKGCMC 3 cut(s) 1121, 1799, 2059
BsgI GTGCAG 2 cut(s) 1718, 2370
Bsh1236I CGCG 2 cut(s) 72, 201
Bsh1285I CGRYCG 2 cut(s) 763, 2412
BshNI GGYRCC 4 cut(s) 1065, 1118, 1716, 2456
BshVI ATCGAT 1 cut(s) 2451
BsiEI CGRYCG 2 cut(s) 763, 2412
BsiHKAI GWGCWC 5 cut(s) 111, 597, 1518, 2059, 2960
BsiHKCI CYCGRG 1 cut(s) 1721
BsiSI CCGG 7 cut(s) 94, 249, 346, 386, 952, 1670, 2292
BslFI GGGAC 5 cut(s) 467, 765, 1914, 2027, 2447
BslI CCNNNNNNNGG 5 cut(s) 64, 1024, 1075, 1531, 2602
BsmAI GTCTC 4 cut(s) 190, 238, 249, 2720
BsmBI CGTCTC 2 cut(s) 190, 238
BsmFI GGGAC 5 cut(s) 467, 765, 1914, 2027, 2447
Bso31I GGTCTC 1 cut(s) 249
BsoBI CYCGRG 1 cut(s) 1721
Bsp120I GGGCCC 1 cut(s) 1795
Bsp1286I GDGCHC 7 cut(s) 111, 597, 1121, 1518, 1799, 2059, 2960
BspACI CCGC 9 cut(s) 121, 179, 204, 210, 449, 1031, 1439, 1673, 2831
BspCNI CTCAG 7 cut(s) 54, 309, 358, 729, 1007, 1873, 3071
BspDI ATCGAT 1 cut(s) 2451
BspFNI CGCG 2 cut(s) 72, 201
BspHI TCATGA 1 cut(s) 1360
BspMAI CTGCAG 5 cut(s) 1074, 1144, 2379, 2551, 2989
BspMI ACCTGC 1 cut(s) 1077
BspPI GGATC 3 cut(s) 454, 830, 2377
BspT107I GGYRCC 4 cut(s) 1065, 1118, 1716, 2456
BspTI CTTAAG 1 cut(s) 2000
BspTNI GGTCTC 1 cut(s) 249
BsrBI CCGCTC 1 cut(s) 123
BsrDI GCAATG 4 cut(s) 835, 1287, 2173, 2311
BsrFI RCCGGY 1 cut(s) 248
BsrI ACTGG 4 cut(s) 693, 1052, 1473, 2626
BssAI RCCGGY 1 cut(s) 248
BssECI CCNNGG 6 cut(s) 259, 1122, 1720, 2256, 2412, 2460
BssNI GRCGYC 1 cut(s) 134
BssT1I CCWWGG 1 cut(s) 2256
Bst2UI CCWGG 3 cut(s) 261, 2387, 2744
Bst4CI ACNGT 9 cut(s) 434, 478, 524, 683, 974, 1568, 1879, 2461, 2714
Bst6I CTCTTC 4 cut(s) 18, 711, 2028, 3039
BstACI GRCGYC 1 cut(s) 134
BstAFI CTTAAG 1 cut(s) 2000
BstAPI GCANNNNNTGC 2 cut(s) 1136, 1561
BstBAI YACGTR 1 cut(s) 2867
BstDSI CCRYGG 1 cut(s) 2460
BstENI CCTNNNNNAGG 1 cut(s) 62
BstFNI CGCG 2 cut(s) 72, 201
BstH2I RGCGCY 1 cut(s) 494
BstHHI GCGC 4 cut(s) 74, 203, 219, 493
BstMAI GTCTC 4 cut(s) 190, 238, 249, 2720
BstMCI CGRYCG 2 cut(s) 763, 2412
BstNI CCWGG 3 cut(s) 261, 2387, 2744
BstNSI RCATGY 3 cut(s) 1257, 1469, 2280
BstSCI CCNGG 5 cut(s) 259, 345, 2290, 2385, 2742
BstSFI CTRYAG 8 cut(s) 558, 894, 1070, 1140, 1149, 2375, 2547, 2985
BstSLI GKGCMC 3 cut(s) 1121, 1799, 2059
BstUI CGCG 2 cut(s) 72, 201
BstV2I GAAGAC 6 cut(s) 132, 139, 590, 996, 2546, 2881
BstX2I RGATCY 4 cut(s) 459, 835, 1207, 2680
BstXI CCANNNNNNTGG 1 cut(s) 2518
BstYI RGATCY 4 cut(s) 459, 835, 1207, 2680
Bsu15I ATCGAT 1 cut(s) 2451
Bsu36I CCTNAGG 2 cut(s) 296, 1860
BsuI GTATCC 2 cut(s) 959, 1291
BsuTUI ATCGAT 1 cut(s) 2451
BtgI CCRYGG 1 cut(s) 2460
BtgZI GCGATG 1 cut(s) 1881
BtrI CACGTC 1 cut(s) 1696
BtsI GCAGTG 3 cut(s) 412, 1137, 1562
BveI ACCTGC 1 cut(s) 1077
CciI TCATGA 1 cut(s) 1360
CfoI GCGC 4 cut(s) 74, 203, 219, 493
Cfr10I RCCGGY 1 cut(s) 248
Cfr13I GGNCC 8 cut(s) 348, 903, 1795, 1796, 2289, 2389, 2434, 2948
ClaI ATCGAT 1 cut(s) 2451
CseI GACGC 4 cut(s) 123, 207, 281, 2310
Csp6I GTAC 9 cut(s) 474, 845, 932, 958, 1323, 2024, 2158, 2457, 2868
CspCI CAANNNNNGTGG 2 cut(s) 2911, 2946
CviAII CATG 7 cut(s) 1254, 1361, 1384, 1466, 1891, 2277, 2371
CviQI GTAC 9 cut(s) 474, 845, 932, 958, 1323, 2024, 2158, 2457, 2868
DraI TTTAAA 1 cut(s) 2124
DriI GACNNNNNGTC 2 cut(s) 1881, 1926
EaeI YGGCCR 2 cut(s) 262, 2228
Eam1104I CTCTTC 4 cut(s) 18, 711, 2028, 3039
Eam1105I GACNNNNNGTC 2 cut(s) 1881, 1926
EarI CTCTTC 4 cut(s) 18, 711, 2028, 3039
EciI GGCGGA 1 cut(s) 199
Ecl136II GAGCTC 3 cut(s) 109, 1516, 2958
Eco130I CCWWGG 1 cut(s) 2256
Eco24I GRGCYC 4 cut(s) 111, 1518, 1799, 2960
Eco31I GGTCTC 1 cut(s) 249
Eco32I GATATC 1 cut(s) 529
Eco47I GGWCC 1 cut(s) 2434
Eco53kI GAGCTC 3 cut(s) 109, 1516, 2958
Eco57I CTGAAG 3 cut(s) 957, 1005, 2146
Eco81I CCTNAGG 2 cut(s) 296, 1860
Eco88I CYCGRG 1 cut(s) 1721
EcoICRI GAGCTC 3 cut(s) 109, 1516, 2958
EcoNI CCTNNNNNAGG 1 cut(s) 62
EcoO109I RGGNCCY 4 cut(s) 903, 1795, 1796, 2389
EcoRI GAATTC 1 cut(s) 290
EcoRII CCWGG 3 cut(s) 259, 2385, 2742
EcoRV GATATC 1 cut(s) 529
EcoT14I CCWWGG 1 cut(s) 2256
EcoT38I GRGCYC 4 cut(s) 111, 1518, 1799, 2960
ErhI CCWWGG 1 cut(s) 2256
Esp3I CGTCTC 2 cut(s) 190, 238
FaeI CATG 7 cut(s) 1257, 1364, 1387, 1469, 1894, 2280, 2374
FalI AAGNNNNNCTT 6 cut(s) 1482, 1514, 2043, 2075, 2754, 2786
FaqI GGGAC 5 cut(s) 467, 765, 1914, 2027, 2447
FatI CATG 7 cut(s) 1253, 1360, 1383, 1465, 1890, 2276, 2370
FauI CCCGC 2 cut(s) 186, 442
FauNDI CATATG 1 cut(s) 2560
FblI GTMKAC 1 cut(s) 1258
FriOI GRGCYC 4 cut(s) 111, 1518, 1799, 2960
FspBI CTAG 9 cut(s) 59, 689, 1211, 1320, 1763, 1926, 2028, 2430, 2792
GlaI GCGC 4 cut(s) 73, 202, 218, 492
GsuI CTGGAG 2 cut(s) 1069, 2331
HaeII RGCGCY 1 cut(s) 494
HapII CCGG 7 cut(s) 94, 249, 346, 386, 952, 1670, 2292
HgaI GACGC 4 cut(s) 123, 207, 281, 2310
HhaI GCGC 4 cut(s) 74, 203, 219, 493
Hin1I GRCGYC 1 cut(s) 134
Hin1II CATG 7 cut(s) 1257, 1364, 1387, 1469, 1894, 2280, 2374
Hin6I GCGC 4 cut(s) 72, 201, 217, 491
HinP1I GCGC 4 cut(s) 72, 201, 217, 491
HincII GTYRAC 1 cut(s) 1259
HindII GTYRAC 1 cut(s) 1259
HindIII AAGCTT 1 cut(s) 1778
HpaII CCGG 7 cut(s) 94, 249, 346, 386, 952, 1670, 2292
HphI GGTGA 5 cut(s) 932, 953, 1430, 1490, 3076
Hpy166II GTNNAC 5 cut(s) 410, 1259, 2057, 2345, 2966
Hpy188III TCNNGA 9 cut(s) 193, 545, 860, 1169, 1361, 1424, 1862, 1907, 2738
Hpy8I GTNNAC 5 cut(s) 410, 1259, 2057, 2345, 2966
Hpy99I CGWCG 2 cut(s) 139, 275
HpyCH4III ACNGT 9 cut(s) 434, 478, 524, 683, 974, 1568, 1879, 2461, 2714
HpyCH4IV ACGT 6 cut(s) 499, 1000, 1695, 2347, 2365, 2866
HpySE526I ACGT 6 cut(s) 499, 1000, 1695, 2347, 2365, 2866
Hsp92I GRCGYC 1 cut(s) 134
Hsp92II CATG 7 cut(s) 1257, 1364, 1387, 1469, 1894, 2280, 2374
HspAI GCGC 4 cut(s) 72, 201, 217, 491
KpnI GGTACC 1 cut(s) 2460
LmnI GCTCC 7 cut(s) 106, 128, 180, 1347, 1513, 1807, 2848
LweI GCATC 8 cut(s) 228, 382, 540, 1090, 1219, 1426, 1551, 1861
MaeI CTAG 9 cut(s) 59, 689, 1211, 1320, 1763, 1926, 2028, 2430, 2792
MaeII ACGT 6 cut(s) 499, 1000, 1695, 2347, 2365, 2866
MaeIII GTNAC 2 cut(s) 2272, 3064
MbiI CCGCTC 1 cut(s) 123
MflI RGATCY 4 cut(s) 459, 835, 1207, 2680
MhlI GDGCHC 7 cut(s) 111, 597, 1121, 1518, 1799, 2059, 2960
MlsI TGGCCA 1 cut(s) 264
MluNI TGGCCA 1 cut(s) 264
MlyI GAGTC 5 cut(s) 899, 986, 2051, 2536, 2889
MmeI TCCRAC 2 cut(s) 102, 1042
Mox20I TGGCCA 1 cut(s) 264
MroXI GAANNNNTTC 1 cut(s) 1494
MscI TGGCCA 1 cut(s) 264
MslI CAYNNNNRTG 2 cut(s) 1227, 2516
Msp20I TGGCCA 1 cut(s) 264
MspA1I CMGCKG 1 cut(s) 181
MspCI CTTAAG 1 cut(s) 2000
MspI CCGG 7 cut(s) 94, 249, 346, 386, 952, 1670, 2292
MspR9I CCNGG 5 cut(s) 261, 347, 2292, 2387, 2744
MvaI CCWGG 3 cut(s) 261, 2387, 2744
MvnI CGCG 2 cut(s) 72, 201
NciI CCSGG 2 cut(s) 347, 2292
NdeI CATATG 1 cut(s) 2560
NlaIII CATG 7 cut(s) 1257, 1364, 1387, 1469, 1894, 2280, 2374
NmeAIII GCCGAG 2 cut(s) 238, 2206
NmuCI GTSAC 2 cut(s) 2272, 3064
NspI RCATGY 3 cut(s) 1257, 1469, 2280
OliI CACNNNNGTG 1 cut(s) 2516
PaeI GCATGC 1 cut(s) 1469
PagI TCATGA 1 cut(s) 1360
PaqCI CACCTGC 1 cut(s) 1077
PciI ACATGT 1 cut(s) 2276
PcsI WCGNNNNNNNCGW 2 cut(s) 228, 2457
PdmI GAANNNNTTC 1 cut(s) 1494
PflMI CCANNNNNTGG 1 cut(s) 1024
Ple19I CGATCG 1 cut(s) 763
PleI GAGTC 5 cut(s) 898, 986, 2050, 2536, 2888
PpsI GAGTC 5 cut(s) 898, 986, 2050, 2536, 2888
Ppu21I YACGTR 1 cut(s) 2867
PscI ACATGT 1 cut(s) 2276
PshBI ATTAAT 2 cut(s) 737, 797
Psp124BI GAGCTC 3 cut(s) 111, 1518, 2960
Psp1406I AACGTT 1 cut(s) 1000
Psp6I CCWGG 3 cut(s) 259, 2385, 2742
PspGI CCWGG 3 cut(s) 259, 2385, 2742
PspOMI GGGCCC 1 cut(s) 1795
PspPI GGNCC 8 cut(s) 348, 903, 1795, 1796, 2289, 2389, 2434, 2948
PstI CTGCAG 5 cut(s) 1074, 1144, 2379, 2551, 2989
PsuI RGATCY 4 cut(s) 459, 835, 1207, 2680
PvuI CGATCG 1 cut(s) 763
RsaI GTAC 9 cut(s) 475, 846, 933, 959, 1324, 2025, 2159, 2458, 2869
RsaNI GTAC 9 cut(s) 474, 845, 932, 958, 1323, 2024, 2158, 2457, 2868
RseI CAYNNNNRTG 2 cut(s) 1227, 2516
SacI GAGCTC 3 cut(s) 111, 1518, 2960
SalI GTCGAC 1 cut(s) 1257
Sau96I GGNCC 8 cut(s) 348, 903, 1795, 1796, 2289, 2389, 2434, 2948
ScaI AGTACT 1 cut(s) 846
SchI GAGTC 5 cut(s) 899, 986, 2051, 2536, 2889
ScrFI CCNGG 5 cut(s) 261, 347, 2292, 2387, 2744
SduI GDGCHC 7 cut(s) 111, 597, 1121, 1518, 1799, 2059, 2960
SfaNI GCATC 8 cut(s) 228, 382, 540, 1090, 1219, 1426, 1551, 1861
SfcI CTRYAG 8 cut(s) 558, 894, 1070, 1140, 1149, 2375, 2547, 2985
SinI GGWCC 1 cut(s) 2434
SmiMI CAYNNNNRTG 2 cut(s) 1227, 2516
SmlI CTYRAG 7 cut(s) 545, 851, 1169, 2000, 2474, 2717, 2851
SmoI CTYRAG 7 cut(s) 545, 851, 1169, 2000, 2474, 2717, 2851
SpeI ACTAGT 1 cut(s) 1762
SphI GCATGC 1 cut(s) 1469
SsiI CCGC 9 cut(s) 121, 179, 204, 210, 449, 1031, 1439, 1673, 2831
SspMI CTAG 9 cut(s) 59, 689, 1211, 1320, 1763, 1926, 2028, 2430, 2792
SstI GAGCTC 3 cut(s) 111, 1518, 2960
StyD4I CCNGG 5 cut(s) 259, 345, 2290, 2385, 2742
StyI CCWWGG 1 cut(s) 2256
TaaI ACNGT 9 cut(s) 434, 478, 524, 683, 974, 1568, 1879, 2461, 2714
TaiI ACGT 6 cut(s) 502, 1003, 1698, 2350, 2368, 2869
TaqI TCGA 5 cut(s) 1258, 1356, 1423, 1616, 2451
TaqII GACCGA 1 cut(s) 2426
TatI WGTACW 4 cut(s) 844, 957, 1322, 2157
TauI GCSGC 3 cut(s) 206, 1676, 2833
TseFI GTSAC 2 cut(s) 2272, 3064
Tsp45I GTSAC 2 cut(s) 2272, 3064
TspGWI ACGGA 1 cut(s) 133
Van91I CCANNNNNTGG 1 cut(s) 1024
Vha464I CTTAAG 1 cut(s) 2000
VneI GTGCAC 1 cut(s) 2055
VpaK11BI GGWCC 1 cut(s) 2434
VspI ATTAAT 2 cut(s) 737, 797
XagI CCTNNNNNAGG 1 cut(s) 62
XapI RAATTY 4 cut(s) 290, 698, 1481, 2079
XceI RCATGY 3 cut(s) 1257, 1469, 2280
XmiI GTMKAC 1 cut(s) 1258
XmnI GAANNNNTTC 1 cut(s) 1494
XspI CTAG 9 cut(s) 59, 689, 1211, 1320, 1763, 1926, 2028, 2430, 2792
ZrmI AGTACT 1 cut(s) 846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.