AT5G45510

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0009232
Physical Location & Seq
Forward (+)
18444607 .. 18449446
4840 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G45510.1

Sequence Viewer

Length: 3669 bp
ATGTCTGATCCGTTGAAGATGGCGGCCGAGACGGAGGAGATTAAACCAGTTCCAGCAGCAATGGGAGAAAAGAAGGATGTGGTGTTGTGTAAGAAGATAGTGGAAACTCTGGGAGGAGGTGGTGATCAAAGAGTATTGCTGGTTGGCGAAGCTGGGATCGGGAAGACAAGGATGGCACAAATGGTTGACAAAGAAGCCTCTAAGGATGTTCTTTGCTACCAGACTCTCTGGTTGCATCTCAACAGGAAGTTTAAAGTCAACGACAACTATATCAAGGAGAAGAAGTTTGAAGACGAATGGTCTCTTTATGAGAACATAGCTTCACAGCTATCTTTATACTCTGATTTTGAAGAGACTGAAGTCGGTGAAAGAGATGAAGATGAGGAAGAGGAGAAGAAGGTTGAAGATTTGCTCAAGGATTTGAAGCCCAAGATTGAGAAGTATCTCTTGGAAAAGAAGGAAGCCGTCGTGAAAAAATTGGAGGATGACAAGAAGAAGAAGGAGAAGGAAGCCGCAGAGAAACTGGAGGCTGAGAAAAAACTGGTGGATCCGGCTGCGAAAAAAGCAAAAGACCATGGAAACAAGAATCCAACCGATGCCGCAAAGGAGAAAACGACTCAAGTAGTAGCCGGAGGAGAGGATAAAGCTCAGACATCATCTGAAAGAAAGCCGTATCTTCTTTTGATTCTTGACGATGAAGGAATGACCAGTGAGTACGAGGTGATGGTGCATTTAGGCCTTGAGGATTTTCTGAAAGATCACACACCTCGAAAAATCCTTATTACAAGAAGACAAGAAACTGAGGAGGCTACAAAATCTGGTGAGCATGCTGAGGGGGAGGCAAATGATTCGCAATCCGGGGAAAAGAAAGAGGACACAGATGGTGAAGACGAAATTAGATCAGCTGATAAGGAGGAACCTGAGTCTCAAGCCCGGGTCAAAACAGAGGAGAAACATGAAAAAGTTGTACCTCCTACCATAGATGACTTATGGGGGAGCACAAACACTTATGGTGAAATTACGTTCCAGACCACAAATGAGTCACAAGATTTACTTGAATCATTCAACCTAAAGGAGGCAGAGGCTTTATTTACTTCGTCCATGTTTTTCAAGGATATGCCAAATTTTTTCTTTGACCCCGTTCCTGGGACTGATGAGAAACTGTTAAACCACATGCTGAAAAAGAGCAAGAGTTTGCCAGCTGCAATCAACGTGCTCGCCAAGTCCCTAGAGTACACTGTCAAGAGCAAGTCCTATAAGCTTAATAAGGACGAAGAAGAGAGGTTACTAAAAGAAAAGATAGAAATGGTTCTCTCGGCTGAGCGGGGTAATCCATCCGACCAGGAATCTAGTTCTGAGAGCCCTAAGAAAGCAAGTGGAGAAAATCCAATCCTGCTTCTTGCATACAAGCTGTTCAAAACCGATGGTCCATTGAAGGATACAATATTGGATTGTTTTTGGCATAGCTTGGACTTCTTTGAGCATTGTGGCTGTGTTTACTACCGTGACCTGATCACACAATGGATACTTGAAGGCTACTTTGATCCTGTTAGGTCTGTCGAAAAGGCGTACCAGGATGGTCATTCTATCTTCATGGAGCTTATAGACCGCGGAATGCTGAAGATACAAGAAAACAATGTGGTAGTACCAGAGATGGCGATGAGAAATGTAATTGATCCTCGACGTGGTGGGCATTTAGGGAAATCTCGGCTTGGATTTTCTAGAGTCTATGGTGGTAACAAGAGAAAAGGAATAGGGAAAATCACCCAACTTGATGATATGATTAAAACAGTGCAAGCAAAGAAAGGAGACAAGATTACCACGATTCTGGTTAGTGGAGATCGTCTGCGTCGCGTAACTCCTAAAAAGTTCTTCAAGAATCTGAAAGAGCTTGAAGTACTTGGCCTTTTTGAGCCCACAGTAAAACCATTTGTCCCGTCTTTTTCAGATCAGCTCAAACTCCTCCGGGTTCTTATAATCAGGGACTGTGATCTCCTGAAAAGCATTGAAGAGCTTAAGGCTCTTACAAAGCTAAATACTCTTGAAGTTTCTGGTGCTAGCTCCCTGAGCAAAATATCTGAAAAATTCTTTGAGTCATTTCCTGAACTCCGAAGTCTTCACCTCTCTGGGCTTAAGATCGAGTCTTCCCCTCCCAGTATTTCTGGCCTGAAGGAACTTCACTGTCTCATCATCAAAGACTGCCCTTTATTGCAAGATCTGCCAAACATACAAGAACTAGTAAATCTTGAGGTTGTTGATGTTTCTGGTGCTAGTGGGCTTCGAACTTGTTTCGACAACGCAGATGGTGCCAAGAAAAACAAGAGCAAAAACAAAAACTTTTATCTTCTTACAAAACTTCAGCATCTTGACTTCTCGGGGAGCCAAATAGAGCGACTGCCAATATTCCAGGATTCTGCGGTGGCCGCCAAGCTTCACTCCTTGACTCGGCTCTTGTTGCGCAACTGTAGCAAATTGAGAAGGTTGCCTAGTTTGAAGCCCTTGTCAGGACTTCAAATTCTTGATCTTTCTGGCACTACGAGCTTAGTGGAAATGCTTGAAGTGTGCTTCGAGGATAAGCTTGAACTCAAAACTCTTAATCTCTCGGGAACTAATCTTAGCGAGTTGGCTACCACCATCGAGGACCTGTCCAGTCTCAACGAACTCCTCCTACGTGATTGCATCAACCTAGATGCCATCCCAAACATCGAGAAACTAGAAAATCTCGAAGTCATTGATGTTTCCGGCAGTGCCAAGCTGGCAAAGATTGAGGGATCATTTGAGAAAATGTTTTACCTACGTGTAGTGGATCTGTCTGGAACCCAAGTGGAGACACCAGAGTTGCCAGCGGATACCAAAATCCATTGTCTGAAGCGTTTTACTCGGGCAGATGGAAAATGTTTTGAACGTGACACATGGAGAGAAATAAAGGAAGACATTGAACGTGATAGGTCTGAGAATGCCAGCTCCTCTGATGCAGTTGTTATATCTCAAGAAATCACAGAAAAGAAGCCTGTAGAAATAAGAGAGGTTGAATCGAATGCACCTCGCGCCAGTGATTGTACCGAGAAAGTAGATGTCAACAAGGAACGTCTTCTTAAAGTCCCCATAGATAGGGCTCTATATCAGAAGGCACTAACATCACTTGTTGATTCCAAAATTCCACAAGAAGAAGTCTTGGAGATCAATGAAACTAATAAGCTAGATGAGGAAGCACTAGCTAGTGCTGAGTTTGTGTCTTTTGTGGACTGTACTCCTGAAAGGGTCAAATCTATCTTTGAGAAGGCCAAATTGGTGAAGGGTTGCTGGCTAAGGATGTGCTTTGACATAAAAGACCCTTTCGATGGTGTGGATGAGGAGAACTTGAAATCACTGGAGACTTTATCGATTACAAACCTTCTCTCATTGGAGACTATAAGCTTTATTGCTAAGTTAGAGAATCTGAAGAACCTAAGCTTAGATTGCTGCCCGAAAATCAAAACGATTTTCCCGGAGATGCCTGCCAGCCTACCAGTCCTGAATTTAAAGCATTGTGAGAACCTGGAGAAAGTTGTTGTAGGAGTTGAAGTGTCAACTCACACTAATCTGGATTTGAAAGTGGAGAATTGTCCAAAATTCGGGGACTACGTAATGGTTGACCACAGTGATGTACCTCCACCACATGAATGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8

Protein Analysis

1222

Amino Acids

137.92

Weight (kDa)

5.22

Isoelectric Point (pI)

38.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 642 - 754 8e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1976
Acc16I TGCGCA 1 cut(s) 2459
AccB1I GGYRCC 1 cut(s) 2306
AccBSI CCGCTC 1 cut(s) 1324
AccII CGCG 3 cut(s) 1611, 1854, 3048
AciI CCGC 9 cut(s) 23, 513, 600, 1324, 1609, 1611, 2417, 2424, 2846
AclWI GGATC 8 cut(s) 2, 164, 542, 555, 1538, 1670, 2779, 2814
AcoI YGGCCR 2 cut(s) 24, 2421
AcsI RAATTY 6 cut(s) 1123, 2084, 2514, 3156, 3517, 3611
AcuI CTGAAG 6 cut(s) 378, 1640, 2189, 2342, 2888, 3461
AfaI GTAC 9 cut(s) 716, 969, 1235, 1571, 1647, 1899, 3061, 3250, 3648
AfiI CCNNNNNNNGG 9 cut(s) 1075, 1145, 1146, 1685, 2445, 2504, 3111, 3341, 3614
AflII CTTAAG 2 cut(s) 2015, 2132
AflIII ACRYGT 1 cut(s) 2797
AhdI GACNNNNNGTC 1 cut(s) 298
AhlI ACTAGT 1 cut(s) 2236
AjiI CACGTC 1 cut(s) 1685
AjnI CCWGG 5 cut(s) 1144, 1341, 1572, 2406, 3537
AjuI GAANNNNNNNTTGG 4 cut(s) 431, 463, 3272, 3304
Alw21I GWGCWC 2 cut(s) 1001, 1218
AlwI GGATC 8 cut(s) 2, 164, 542, 555, 1538, 1670, 2779, 2814
AlwNI CAGNNNCTG 1 cut(s) 1986
Ama87I CYCGRG 4 cut(s) 933, 2374, 2602, 2880
AoxI GGCC 6 cut(s) 24, 736, 1903, 2164, 2421, 3282
ApeKI GCWGC 4 cut(s) 56, 554, 1202, 3462
ApoI RAATTY 6 cut(s) 1123, 2084, 2514, 3156, 3517, 3611
Asp700I GAANNNNTTC 2 cut(s) 1308, 3090
AspLEI GCGC 2 cut(s) 2460, 3050
AspS9I GGNCC 2 cut(s) 1427, 2641
AsuC2I CCSGG 5 cut(s) 859, 934, 935, 1967, 3488
AsuHPI GGTGA 9 cut(s) 134, 377, 733, 833, 896, 1025, 1756, 2111, 3304
AsuII TTCGAA 1 cut(s) 2281
AsuNHI GCTAGC 1 cut(s) 2057
AvaI CYCGRG 4 cut(s) 933, 2374, 2602, 2880
AvaII GGWCC 2 cut(s) 1427, 2641
BamHI GGATCC 1 cut(s) 547
BanI GGYRCC 1 cut(s) 2306
BanII GRGCYC 3 cut(s) 1364, 1917, 3118
BarI GAAGNNNNNNTAC 2 cut(s) 1269, 1301
BbsI GAAGAC 8 cut(s) 170, 297, 796, 894, 2108, 2136, 2937, 3083
Bbv12I GWGCWC 2 cut(s) 1001, 1218
BbvCI CCTCAGC 1 cut(s) 831
BbvI GCAGC 4 cut(s) 68, 541, 1189, 3449
BceAI ACGGC 2 cut(s) 449, 655
BcgI CGANNNNNNTGC 2 cut(s) 831, 865
BciT130I CCWGG 5 cut(s) 1146, 1343, 1574, 2408, 3539
BciVI GTATCC 3 cut(s) 1432, 1518, 2842
BclI TGATCA 2 cut(s) 124, 1512
BcnI CCSGG 5 cut(s) 859, 934, 935, 1967, 3488
BcuI ACTAGT 1 cut(s) 2236
BfmI CTRYAG 2 cut(s) 2464, 3012
BfrI CTTAAG 2 cut(s) 2015, 2132
BfuI GTATCC 3 cut(s) 1432, 1518, 2842
BglI GCCNNNNNGGC 1 cut(s) 2756
BglII AGATCT 1 cut(s) 2215
BisI GCNGC 8 cut(s) 24, 57, 513, 555, 600, 1203, 2424, 3463
BlpI GCTNAGC 1 cut(s) 1320
BlsI GCNGC 8 cut(s) 25, 58, 514, 556, 601, 1204, 2425, 3464
BmcAI AGTACT 1 cut(s) 1899
Bme18I GGWCC 2 cut(s) 1427, 2641
BmeRI GACNNNNNGTC 1 cut(s) 298
BmeT110I CYCGRG 4 cut(s) 933, 2374, 2602, 2880
BmgBI CACGTC 1 cut(s) 1685
BmgT120I GGNCC 2 cut(s) 1427, 2641
BmiI GGNNCC 5 cut(s) 549, 918, 2308, 2381, 2818
BmrI ACTGGG 1 cut(s) 2148
BmsI GCATC 7 cut(s) 244, 586, 2371, 2680, 2688, 2962, 3483
BmtI GCTAGC 1 cut(s) 2061
BmuI ACTGGG 1 cut(s) 2148
BoxI GACNNNNGTC 1 cut(s) 359
BpiI GAAGAC 8 cut(s) 170, 297, 796, 894, 2108, 2136, 2937, 3083
BpmI CTGGAG 3 cut(s) 545, 3392, 3560
Bpu10I CCTNAGC 4 cut(s) 831, 2066, 3308, 3449
Bpu1102I GCTNAGC 1 cut(s) 1320
Bpu14I TTCGAA 1 cut(s) 2281
BpuEI CTTGAG 6 cut(s) 398, 603, 761, 912, 2267, 2973
BpuMI CCSGG 5 cut(s) 859, 934, 935, 1967, 3488
Bsa29I ATCGAT 1 cut(s) 3383
BsaAI YACGTR 3 cut(s) 2672, 2798, 3625
BsaI GGTCTC 1 cut(s) 306
BsaJI CCNNGG 5 cut(s) 574, 858, 933, 1145, 1609
BsaXI ACNNNNNCTCC 4 cut(s) 269, 299, 3549, 3579
Bsc4I CCNNNNNNNGG 9 cut(s) 1075, 1145, 1146, 1685, 2445, 2504, 3111, 3341, 3614
Bse1I ACTGG 9 cut(s) 47, 528, 546, 708, 2154, 2649, 3051, 3375, 3509
Bse3DI GCAATG 1 cut(s) 66
BseBI CCWGG 5 cut(s) 1146, 1343, 1574, 2408, 3539
BseCI ATCGAT 1 cut(s) 3383
BseDI CCNNGG 5 cut(s) 574, 858, 933, 1145, 1609
BseGI GGATG 9 cut(s) 82, 177, 211, 490, 1334, 1582, 2694, 3318, 3355
BseLI CCNNNNNNNGG 9 cut(s) 1075, 1145, 1146, 1685, 2445, 2504, 3111, 3341, 3614
BseMI GCAATG 1 cut(s) 66
BseNI ACTGG 9 cut(s) 47, 528, 546, 708, 2154, 2649, 3051, 3375, 3509
BseX3I CGGCCG 1 cut(s) 24
BseXI GCAGC 4 cut(s) 68, 541, 1189, 3449
BseYI CCCAGC 1 cut(s) 152
Bsh1236I CGCG 3 cut(s) 1611, 1854, 3048
Bsh1285I CGRYCG 1 cut(s) 27
BshFI GGCC 6 cut(s) 26, 738, 1905, 2166, 2423, 3284
BshNI GGYRCC 1 cut(s) 2306
BshVI ATCGAT 1 cut(s) 3383
BsiEI CGRYCG 1 cut(s) 27
BsiHKAI GWGCWC 2 cut(s) 1001, 1218
BsiHKCI CYCGRG 4 cut(s) 933, 2374, 2602, 2880
BsiSI CCGG 7 cut(s) 551, 630, 858, 934, 1966, 2742, 3488
BslFI GGGAC 6 cut(s) 1162, 1210, 1919, 1997, 3086, 3632
BslI CCNNNNNNNGG 9 cut(s) 1075, 1145, 1146, 1685, 2445, 2504, 3111, 3341, 3614
BsmBI CGTCTC 1 cut(s) 23
BsmFI GGGAC 6 cut(s) 1162, 1210, 1919, 1997, 3086, 3632
BsmI GAATGC 4 cut(s) 1620, 2962, 3043, 3668
BsnI GGCC 6 cut(s) 26, 738, 1905, 2166, 2423, 3284
Bso31I GGTCTC 1 cut(s) 306
BsoBI CYCGRG 4 cut(s) 933, 2374, 2602, 2880
Bsp119I TTCGAA 1 cut(s) 2281
Bsp1286I GDGCHC 5 cut(s) 1001, 1218, 1364, 1917, 3118
Bsp1720I GCTNAGC 1 cut(s) 1320
Bsp19I CCATGG 1 cut(s) 574
BspACI CCGC 9 cut(s) 23, 513, 600, 1324, 1609, 1611, 2417, 2424, 2846
BspANI GGCC 6 cut(s) 26, 738, 1905, 2166, 2423, 3284
BspDI ATCGAT 1 cut(s) 3383
BspFNI CGCG 3 cut(s) 1611, 1854, 3048
BspLI GGNNCC 5 cut(s) 549, 918, 2308, 2381, 2818
BspOI GCTAGC 1 cut(s) 2061
BspPI GGATC 8 cut(s) 2, 164, 542, 555, 1538, 1670, 2779, 2814
BspQI GCTCTTC 1 cut(s) 2004
BspT104I TTCGAA 1 cut(s) 2281
BspT107I GGYRCC 1 cut(s) 2306
BspTI CTTAAG 2 cut(s) 2015, 2132
BspTNI GGTCTC 1 cut(s) 306
BsrBI CCGCTC 1 cut(s) 1324
BsrDI GCAATG 1 cut(s) 66
BsrI ACTGG 9 cut(s) 47, 528, 546, 708, 2154, 2649, 3051, 3375, 3509
BssECI CCNNGG 5 cut(s) 574, 858, 933, 1145, 1609
BssT1I CCWWGG 1 cut(s) 574
Bst2UI CCWGG 5 cut(s) 1146, 1343, 1574, 2408, 3539
Bst6I CTCTTC 4 cut(s) 345, 381, 1272, 2004
BstAFI CTTAAG 2 cut(s) 2015, 2132
BstAPI GCANNNNNTGC 2 cut(s) 2218, 2306
BstBAI YACGTR 3 cut(s) 2672, 2798, 3625
BstBI TTCGAA 1 cut(s) 2281
BstDSI CCRYGG 2 cut(s) 574, 1609
BstENI CCTNNNNNAGG 1 cut(s) 1073
BstF5I GGATG 9 cut(s) 82, 177, 211, 490, 1334, 1582, 2694, 3318, 3355
BstFNI CGCG 3 cut(s) 1611, 1854, 3048
BstHHI GCGC 2 cut(s) 2460, 3050
BstMCI CGRYCG 1 cut(s) 27
BstNI CCWGG 5 cut(s) 1146, 1343, 1574, 2408, 3539
BstNSI RCATGY 2 cut(s) 830, 1177
BstPAI GACNNNNGTC 1 cut(s) 359
BstSFI CTRYAG 2 cut(s) 2464, 3012
BstSNI TACGTA 1 cut(s) 3625
BstUI CGCG 3 cut(s) 1611, 1854, 3048
BstV1I GCAGC 4 cut(s) 68, 541, 1189, 3449
BstV2I GAAGAC 8 cut(s) 170, 297, 796, 894, 2108, 2136, 2937, 3083
BstX2I RGATCY 3 cut(s) 547, 2215, 2806
BstXI CCANNNNNNTGG 1 cut(s) 1828
BstYI RGATCY 3 cut(s) 547, 2215, 2806
BstZI CGGCCG 1 cut(s) 24
Bsu15I ATCGAT 1 cut(s) 3383
BsuI GTATCC 3 cut(s) 1432, 1518, 2842
BsuRI GGCC 6 cut(s) 26, 738, 1905, 2166, 2423, 3284
BsuTUI ATCGAT 1 cut(s) 3383
BtgI CCRYGG 2 cut(s) 574, 1609
BtgZI GCGATG 1 cut(s) 1673
BtrI CACGTC 1 cut(s) 1685
BtsCI GGATG 9 cut(s) 82, 177, 211, 490, 1334, 1582, 2694, 3318, 3355
BtsI GCAGTG 1 cut(s) 2752
BtsIMutI CAGTG 8 cut(s) 715, 1236, 1797, 2179, 2752, 3058, 3368, 3646
CaiI CAGNNNCTG 1 cut(s) 1986
CfoI GCGC 2 cut(s) 2460, 3050
Cfr13I GGNCC 2 cut(s) 1427, 2641
Cfr42I CCGCGG 1 cut(s) 1612
Cfr9I CCCGGG 1 cut(s) 933
ClaI ATCGAT 1 cut(s) 3383
CseI GACGC 1 cut(s) 1838
Csp6I GTAC 9 cut(s) 715, 968, 1234, 1570, 1646, 1898, 3060, 3249, 3647
CviAII CATG 8 cut(s) 575, 827, 956, 1102, 1174, 1594, 2913, 3659
CviQI GTAC 9 cut(s) 715, 968, 1234, 1570, 1646, 1898, 3060, 3249, 3647
DraI TTTAAA 2 cut(s) 253, 3522
DriI GACNNNNNGTC 1 cut(s) 298
EaeI YGGCCR 2 cut(s) 24, 2421
EagI CGGCCG 1 cut(s) 24
Eam1104I CTCTTC 4 cut(s) 345, 381, 1272, 2004
Eam1105I GACNNNNNGTC 1 cut(s) 298
EarI CTCTTC 4 cut(s) 345, 381, 1272, 2004
EclXI CGGCCG 1 cut(s) 24
Eco105I TACGTA 1 cut(s) 3625
Eco130I CCWWGG 1 cut(s) 574
Eco147I AGGCCT 1 cut(s) 738
Eco24I GRGCYC 3 cut(s) 1364, 1917, 3118
Eco31I GGTCTC 1 cut(s) 306
Eco47I GGWCC 2 cut(s) 1427, 2641
Eco52I CGGCCG 1 cut(s) 24
Eco57I CTGAAG 6 cut(s) 378, 1640, 2189, 2342, 2888, 3461
Eco88I CYCGRG 4 cut(s) 933, 2374, 2602, 2880
EcoNI CCTNNNNNAGG 1 cut(s) 1073
EcoO109I RGGNCCY 1 cut(s) 2641
EcoRII CCWGG 5 cut(s) 1144, 1341, 1572, 2406, 3537
EcoT14I CCWWGG 1 cut(s) 574
EcoT38I GRGCYC 3 cut(s) 1364, 1917, 3118
ErhI CCWWGG 1 cut(s) 574
Esp3I CGTCTC 1 cut(s) 23
FaeI CATG 8 cut(s) 578, 830, 959, 1105, 1177, 1597, 2916, 3662
FalI AAGNNNNNCTT 4 cut(s) 431, 463, 1038, 1070
FaqI GGGAC 6 cut(s) 1162, 1210, 1919, 1997, 3086, 3632
FatI CATG 8 cut(s) 574, 826, 955, 1101, 1173, 1593, 2912, 3658
FauI CCCGC 1 cut(s) 1317
FbaI TGATCA 2 cut(s) 124, 1512
Fnu4HI GCNGC 8 cut(s) 24, 57, 513, 555, 600, 1203, 2424, 3463
FokI GGATG 9 cut(s) 89, 184, 218, 497, 1321, 1589, 2681, 3325, 3362
FriOI GRGCYC 3 cut(s) 1364, 1917, 3118
Fsp4HI GCNGC 8 cut(s) 24, 57, 513, 555, 600, 1203, 2424, 3463
FspI TGCGCA 1 cut(s) 2459
GlaI GCGC 2 cut(s) 2459, 3049
GluI GCNGC 8 cut(s) 24, 57, 513, 555, 600, 1203, 2424, 3463
GsaI CCCAGC 1 cut(s) 156
GsuI CTGGAG 3 cut(s) 545, 3392, 3560
HaeIII GGCC 6 cut(s) 26, 738, 1905, 2166, 2423, 3284
HapII CCGG 7 cut(s) 551, 630, 858, 934, 1966, 2742, 3488
HgaI GACGC 1 cut(s) 1838
HhaI GCGC 2 cut(s) 2460, 3050
Hin1II CATG 8 cut(s) 578, 830, 959, 1105, 1177, 1597, 2916, 3662
Hin6I GCGC 2 cut(s) 2458, 3048
HinP1I GCGC 2 cut(s) 2458, 3048
HincII GTYRAC 5 cut(s) 187, 259, 3079, 3570, 3634
HindII GTYRAC 5 cut(s) 187, 259, 3079, 3570, 3634
HindIII AAGCTT 5 cut(s) 1259, 2429, 2576, 3415, 3451
HpaII CCGG 7 cut(s) 551, 630, 858, 934, 1966, 2742, 3488
HphI GGTGA 9 cut(s) 134, 377, 733, 833, 896, 1025, 1756, 2111, 3304
Hpy166II GTNNAC 8 cut(s) 187, 259, 1236, 1498, 3079, 3244, 3570, 3634
Hpy8I GTNNAC 8 cut(s) 187, 259, 1236, 1498, 3079, 3244, 3570, 3634
Hpy99I CGWCG 3 cut(s) 470, 1686, 1854
HpyCH4IV ACGT 9 cut(s) 1022, 1212, 1684, 2671, 2797, 2905, 2941, 3088, 3624
HpyCH4V TGCA 9 cut(s) 235, 730, 1205, 1403, 1795, 2212, 2679, 2975, 3041
HpySE526I ACGT 9 cut(s) 1022, 1212, 1684, 2671, 2797, 2905, 2941, 3088, 3624
Hsp92II CATG 8 cut(s) 578, 830, 959, 1105, 1177, 1597, 2916, 3662
HspAI GCGC 2 cut(s) 2458, 3048
Ksp22I TGATCA 2 cut(s) 124, 1512
KspI CCGCGG 1 cut(s) 1612
LguI GCTCTTC 1 cut(s) 2004
LmnI GCTCC 5 cut(s) 996, 1597, 2066, 2379, 2969
Lsp1109I GCAGC 4 cut(s) 68, 541, 1189, 3449
LweI GCATC 7 cut(s) 244, 586, 2371, 2680, 2688, 2962, 3483
MaeII ACGT 9 cut(s) 1022, 1212, 1684, 2671, 2797, 2905, 2941, 3088, 3624
MaeIII GTNAC 6 cut(s) 1041, 1284, 1505, 1736, 1855, 2906
MbiI CCGCTC 1 cut(s) 1324
MflI RGATCY 3 cut(s) 547, 2215, 2806
MhlI GDGCHC 5 cut(s) 1001, 1218, 1364, 1917, 3118
MlyI GAGTC 8 cut(s) 217, 610, 932, 1049, 1734, 2102, 2150, 2437
MmeI TCCRAC 2 cut(s) 614, 1362
MroXI GAANNNNTTC 2 cut(s) 1308, 3090
MslI CAYNNNNRTG 2 cut(s) 3642, 3661
MspA1I CMGCKG 4 cut(s) 905, 1202, 1611, 2846
MspCI CTTAAG 2 cut(s) 2015, 2132
MspI CCGG 7 cut(s) 551, 630, 858, 934, 1966, 2742, 3488
Mva1269I GAATGC 4 cut(s) 1620, 2962, 3043, 3668
MvaI CCWGG 5 cut(s) 1146, 1343, 1574, 2408, 3539
MvnI CGCG 3 cut(s) 1611, 1854, 3048
NciI CCSGG 5 cut(s) 859, 934, 935, 1967, 3488
NcoI CCATGG 1 cut(s) 574
NheI GCTAGC 1 cut(s) 2057
NlaIII CATG 8 cut(s) 578, 830, 959, 1105, 1177, 1597, 2916, 3662
NlaIV GGNNCC 5 cut(s) 549, 918, 2308, 2381, 2818
NmeAIII GCCGAG 4 cut(s) 52, 1295, 1687, 2425
NmuCI GTSAC 3 cut(s) 1041, 1505, 2906
NsbI TGCGCA 1 cut(s) 2459
NspI RCATGY 2 cut(s) 830, 1177
NspV TTCGAA 1 cut(s) 2281
PaeI GCATGC 1 cut(s) 830
PceI AGGCCT 1 cut(s) 738
PciSI GCTCTTC 1 cut(s) 2004
PcsI WCGNNNNNNNCGW 1 cut(s) 3621
PctI GAATGC 4 cut(s) 1620, 2962, 3043, 3668
PdmI GAANNNNTTC 2 cut(s) 1308, 3090
PfoI TCCNGGA 2 cut(s) 2406, 3486
PkrI GCNGC 8 cut(s) 25, 58, 514, 556, 601, 1204, 2425, 3464
PleI GAGTC 8 cut(s) 217, 610, 931, 1048, 1733, 2101, 2149, 2437
PpsI GAGTC 8 cut(s) 217, 610, 931, 1048, 1733, 2101, 2149, 2437
Ppu21I YACGTR 3 cut(s) 2672, 2798, 3625
PpuMI RGGWCCY 1 cut(s) 2641
PshAI GACNNNNGTC 1 cut(s) 359
PsiI TTATAA 1 cut(s) 1976
Psp5II RGGWCCY 1 cut(s) 2641
Psp6I CCWGG 5 cut(s) 1144, 1341, 1572, 2406, 3537
PspFI CCCAGC 1 cut(s) 152
PspGI CCWGG 5 cut(s) 1144, 1341, 1572, 2406, 3537
PspN4I GGNNCC 5 cut(s) 549, 918, 2308, 2381, 2818
PspPI GGNCC 2 cut(s) 1427, 2641
PspPPI RGGWCCY 1 cut(s) 2641
PsrI GAACNNNNNNTAC 2 cut(s) 2652, 2684
PstNI CAGNNNCTG 1 cut(s) 1986
PsuI RGATCY 3 cut(s) 547, 2215, 2806
PvuII CAGCTG 2 cut(s) 905, 1202
RsaI GTAC 9 cut(s) 716, 969, 1235, 1571, 1647, 1899, 3061, 3250, 3648
RsaNI GTAC 9 cut(s) 715, 968, 1234, 1570, 1646, 1898, 3060, 3249, 3647
RseI CAYNNNNRTG 2 cut(s) 3642, 3661
SacII CCGCGG 1 cut(s) 1612
SapI GCTCTTC 1 cut(s) 2004
SatI GCNGC 8 cut(s) 24, 57, 513, 555, 600, 1203, 2424, 3463
Sau96I GGNCC 2 cut(s) 1427, 2641
ScaI AGTACT 1 cut(s) 1899
SchI GAGTC 8 cut(s) 217, 610, 932, 1049, 1734, 2102, 2150, 2437
SduI GDGCHC 5 cut(s) 1001, 1218, 1364, 1917, 3118
SfaNI GCATC 7 cut(s) 244, 586, 2371, 2680, 2688, 2962, 3483
SfcI CTRYAG 2 cut(s) 2464, 3012
Sfr303I CCGCGG 1 cut(s) 1612
SfuI TTCGAA 1 cut(s) 2281
SgrBI CCGCGG 1 cut(s) 1612
SinI GGWCC 2 cut(s) 1427, 2641
SmaI CCCGGG 1 cut(s) 935
SmiMI CAYNNNNRTG 2 cut(s) 3642, 3661
SmlI CTYRAG 8 cut(s) 413, 618, 740, 927, 2015, 2132, 2246, 2988
SmoI CTYRAG 8 cut(s) 413, 618, 740, 927, 2015, 2132, 2246, 2988
SnaBI TACGTA 1 cut(s) 3625
SpeI ACTAGT 1 cut(s) 2236
SphI GCATGC 1 cut(s) 830
SseBI AGGCCT 1 cut(s) 738
SsiI CCGC 9 cut(s) 23, 513, 600, 1324, 1609, 1611, 2417, 2424, 2846
SspI AATATT 2 cut(s) 1446, 2403
StuI AGGCCT 1 cut(s) 738
StyI CCWWGG 1 cut(s) 574
TaiI ACGT 9 cut(s) 1025, 1215, 1687, 2674, 2800, 2908, 2944, 3091, 3627
TatI WGTACW 3 cut(s) 1233, 1897, 3248
TauI GCSGC 4 cut(s) 26, 515, 602, 2426
TscAI CASTG 8 cut(s) 715, 1243, 1797, 2186, 2752, 3058, 3375, 3646
TseFI GTSAC 3 cut(s) 1041, 1505, 2906
TseI GCWGC 4 cut(s) 56, 554, 1202, 3462
Tsp45I GTSAC 3 cut(s) 1041, 1505, 2906
TspDTI ATGAA 5 cut(s) 390, 711, 972, 1582, 3201
TspGWI ACGGA 1 cut(s) 47
TspMI CCCGGG 1 cut(s) 933
TspRI CASTG 8 cut(s) 715, 1243, 1797, 2186, 2752, 3058, 3375, 3646
Vha464I CTTAAG 2 cut(s) 2015, 2132
VpaK11BI GGWCC 2 cut(s) 1427, 2641
XagI CCTNNNNNAGG 1 cut(s) 1073
XapI RAATTY 6 cut(s) 1123, 2084, 2514, 3156, 3517, 3611
XbaI TCTAGA 1 cut(s) 1721
XceI RCATGY 2 cut(s) 830, 1177
XmaI CCCGGG 1 cut(s) 933
XmnI GAANNNNTTC 2 cut(s) 1308, 3090
ZrmI AGTACT 1 cut(s) 1899
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.