disease resistance
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19050 AT5G45510 AT5G45510 |
| fragaria_vesca | FvH4_6g22120 |
| malus_domestica | MD14G1055300.v1.1 |
| prunus_persica | Prupe.7G078000_v2.0.a1 Prupe.7G078200_v2.0.a1 |
| pyrus_communis | pycom14g04560 |
| rosa_chinensis | RchiOBHm_Chr3g0479451 |
| rosa_laevigata | RLG00000023571 RLG00000023572 RLG00000023574 |
| rosa_multiflora | Rmu_sc0003405.1_g000008 Rmu_sc0004732.1_g000021 Rmu_sc0015035.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00402260 |
| rosa_rugosa | Rorug03G0175400 |
| rosa_samantha | Rh3AG226600 Rh3BG259700 Rh3CG255700 Rh3DG251800 |
| rosa_wichuraiana | Rw3G020230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 783 |
| AccB1I | GGYRCC | 1 cut(s) | 836 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 974 |
| AccI | GTMKAC | 1 cut(s) | 885 |
| AciI | CCGC | 1 cut(s) | 224 |
| AclWI | GGATC | 6 cut(s) | 398, 411, 890, 1518, 1739, 1804 |
| AcoI | YGGCCR | 1 cut(s) | 1576 |
| AcsI | RAATTY | 4 cut(s) | 113, 1757, 2196, 2438 |
| AcuI | CTGAAG | 2 cut(s) | 1884, 2033 |
| AfaI | GTAC | 2 cut(s) | 1026, 1599 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 846, 974, 1080 |
| AflII | CTTAAG | 2 cut(s) | 1768, 2258 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1322 |
| AjiI | CACGTC | 1 cut(s) | 1424 |
| AjnI | CCWGG | 4 cut(s) | 717, 855, 967, 1544 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1260, 1292 |
| Alw21I | GWGCWC | 2 cut(s) | 1180, 1716 |
| Alw26I | GTCTC | 2 cut(s) | 1619, 2022 |
| AlwI | GGATC | 6 cut(s) | 398, 411, 890, 1518, 1739, 1804 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1722 |
| AoxI | GGCC | 2 cut(s) | 1576, 2262 |
| ApeKI | GCWGC | 5 cut(s) | 611, 683, 1109, 1207, 2042 |
| ApoI | RAATTY | 4 cut(s) | 113, 1757, 2196, 2438 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2021, 2053 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 543 |
| AspA2I | CCTAGG | 1 cut(s) | 1655 |
| AspS9I | GGNCC | 3 cut(s) | 1324, 1333, 2263 |
| AsuC2I | CCSGG | 1 cut(s) | 108 |
| AsuHPI | GGTGA | 4 cut(s) | 28, 253, 802, 1518 |
| AsuII | TTCGAA | 2 cut(s) | 1846, 2241 |
| AvaII | GGWCC | 2 cut(s) | 1324, 1333 |
| AvrII | CCTAGG | 1 cut(s) | 1655 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 219, 252 |
| BalI | TGGCCA | 1 cut(s) | 1578 |
| BamHI | GGATCC | 1 cut(s) | 403 |
| BanI | GGYRCC | 1 cut(s) | 836 |
| BbsI | GAAGAC | 2 cut(s) | 251, 2439 |
| Bbv12I | GWGCWC | 2 cut(s) | 1180, 1716 |
| BbvCI | CCTCAGC | 1 cut(s) | 615 |
| BbvI | GCAGC | 5 cut(s) | 598, 695, 1121, 1219, 2054 |
| BccI | CCATC | 9 cut(s) | 160, 405, 425, 821, 1112, 1324, 1537, 1564, 1568 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 539, 573 |
| BciT130I | CCWGG | 4 cut(s) | 719, 857, 969, 1546 |
| BciVI | GTATCC | 3 cut(s) | 220, 309, 1687 |
| BclI | TGATCA | 1 cut(s) | 1248 |
| BcnI | CCSGG | 1 cut(s) | 108 |
| BcoDI | GTCTC | 2 cut(s) | 1619, 2022 |
| BfaI | CTAG | 4 cut(s) | 713, 1656, 1887, 2412 |
| BfmI | CTRYAG | 3 cut(s) | 87, 681, 2217 |
| BfrI | CTTAAG | 2 cut(s) | 1768, 2258 |
| BfuAI | ACCTGC | 1 cut(s) | 783 |
| BfuI | GTATCC | 3 cut(s) | 220, 309, 1687 |
| BglII | AGATCT | 1 cut(s) | 677 |
| BisI | GCNGC | 5 cut(s) | 612, 684, 1110, 1208, 2043 |
| BlnI | CCTAGG | 1 cut(s) | 1655 |
| BlsI | GCNGC | 5 cut(s) | 613, 685, 1111, 1209, 2044 |
| Bme1390I | CCNGG | 5 cut(s) | 108, 719, 857, 969, 1546 |
| Bme18I | GGWCC | 2 cut(s) | 1324, 1333 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1322 |
| BmgBI | CACGTC | 1 cut(s) | 1424 |
| BmgT120I | GGNCC | 3 cut(s) | 1324, 1333, 2263 |
| BmiI | GGNNCC | 4 cut(s) | 105, 405, 838, 1072 |
| BmrFI | CCNGG | 5 cut(s) | 108, 719, 857, 969, 1546 |
| BmsI | GCATC | 3 cut(s) | 598, 1271, 1593 |
| BpiI | GAAGAC | 2 cut(s) | 251, 2439 |
| Bpu10I | CCTNAGC | 1 cut(s) | 615 |
| Bpu14I | TTCGAA | 2 cut(s) | 1846, 2241 |
| BpuEI | CTTGAG | 1 cut(s) | 1967 |
| BpuMI | CCSGG | 1 cut(s) | 108 |
| Bsa29I | ATCGAT | 1 cut(s) | 1587 |
| BsaJI | CCNNGG | 6 cut(s) | 918, 1545, 1655, 1971, 2186, 2418 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 846, 974, 1080 |
| Bse1I | ACTGG | 4 cut(s) | 1414, 1533, 1673, 2304 |
| Bse3DI | GCAATG | 5 cut(s) | 162, 555, 1163, 1165, 1579 |
| BseBI | CCWGG | 4 cut(s) | 719, 857, 969, 1546 |
| BseCI | ATCGAT | 1 cut(s) | 1587 |
| BseDI | CCNNGG | 6 cut(s) | 918, 1545, 1655, 1971, 2186, 2418 |
| BseGI | GGATG | 8 cut(s) | 177, 727, 748, 855, 1286, 1529, 1579, 1940 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 846, 974, 1080 |
| BseMI | GCAATG | 5 cut(s) | 162, 555, 1163, 1165, 1579 |
| BseMII | CTCAG | 6 cut(s) | 275, 394, 606, 1346, 1695, 1729 |
| BseNI | ACTGG | 4 cut(s) | 1414, 1533, 1673, 2304 |
| BseRI | GAGGAG | 4 cut(s) | 165, 632, 635, 764 |
| BseXI | GCAGC | 5 cut(s) | 598, 695, 1121, 1219, 2054 |
| BseYI | CCCAGC | 1 cut(s) | 844 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1185 |
| BshFI | GGCC | 2 cut(s) | 1578, 2264 |
| BshNI | GGYRCC | 1 cut(s) | 836 |
| BshVI | ATCGAT | 1 cut(s) | 1587 |
| BsiEI | CGRYCG | 1 cut(s) | 1185 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1180, 1716 |
| BsiSI | CCGG | 2 cut(s) | 107, 1074 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 846, 974, 1080 |
| BsmAI | GTCTC | 2 cut(s) | 1619, 2022 |
| BsmI | GAATGC | 3 cut(s) | 1198, 1438, 1500 |
| BsnI | GGCC | 2 cut(s) | 1578, 2264 |
| Bsp119I | TTCGAA | 2 cut(s) | 1846, 2241 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1180, 1716 |
| Bsp19I | CCATGG | 1 cut(s) | 2418 |
| BspACI | CCGC | 1 cut(s) | 224 |
| BspANI | GGCC | 2 cut(s) | 1578, 2264 |
| BspCNI | CTCAG | 6 cut(s) | 276, 393, 607, 1347, 1694, 1728 |
| BspDI | ATCGAT | 1 cut(s) | 1587 |
| BspHI | TCATGA | 1 cut(s) | 586 |
| BspLI | GGNNCC | 4 cut(s) | 105, 405, 838, 1072 |
| BspMAI | CTGCAG | 1 cut(s) | 685 |
| BspMI | ACCTGC | 1 cut(s) | 783 |
| BspPI | GGATC | 6 cut(s) | 398, 411, 890, 1518, 1739, 1804 |
| BspQI | GCTCTTC | 1 cut(s) | 2052 |
| BspT104I | TTCGAA | 2 cut(s) | 1846, 2241 |
| BspT107I | GGYRCC | 1 cut(s) | 836 |
| BspTI | CTTAAG | 2 cut(s) | 1768, 2258 |
| BsrDI | GCAATG | 5 cut(s) | 162, 555, 1163, 1165, 1579 |
| BsrI | ACTGG | 4 cut(s) | 1414, 1533, 1673, 2304 |
| BssECI | CCNNGG | 6 cut(s) | 918, 1545, 1655, 1971, 2186, 2418 |
| BssNAI | GTATAC | 1 cut(s) | 886 |
| BssT1I | CCWWGG | 3 cut(s) | 1655, 1971, 2418 |
| Bst1107I | GTATAC | 1 cut(s) | 886 |
| Bst2UI | CCWGG | 4 cut(s) | 719, 857, 969, 1546 |
| Bst4CI | ACNGT | 6 cut(s) | 48, 421, 883, 1024, 1917, 2238 |
| Bst6I | CTCTTC | 4 cut(s) | 549, 663, 826, 2052 |
| BstAFI | CTTAAG | 2 cut(s) | 1768, 2258 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1204 |
| BstBI | TTCGAA | 2 cut(s) | 1846, 2241 |
| BstC8I | GCNNGC | 4 cut(s) | 562, 566, 1352, 1500 |
| BstDEI | CTNAG | 8 cut(s) | 284, 380, 615, 657, 1355, 1681, 1715, 1928 |
| BstDSI | CCRYGG | 1 cut(s) | 2418 |
| BstF5I | GGATG | 8 cut(s) | 177, 727, 748, 855, 1286, 1529, 1579, 1940 |
| BstMAI | GTCTC | 2 cut(s) | 1619, 2022 |
| BstMCI | CGRYCG | 1 cut(s) | 1185 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 1155, 1204, 1495, 1617, 1987, 2128 |
| BstNI | CCWGG | 4 cut(s) | 719, 857, 969, 1546 |
| BstNSI | RCATGY | 3 cut(s) | 282, 1354, 1611 |
| BstSCI | CCNGG | 5 cut(s) | 106, 717, 855, 967, 1544 |
| BstSFI | CTRYAG | 3 cut(s) | 87, 681, 2217 |
| BstV1I | GCAGC | 5 cut(s) | 598, 695, 1121, 1219, 2054 |
| BstV2I | GAAGAC | 2 cut(s) | 251, 2439 |
| BstX2I | RGATCY | 3 cut(s) | 403, 677, 895 |
| BstYI | RGATCY | 3 cut(s) | 403, 677, 895 |
| BstZ17I | GTATAC | 1 cut(s) | 886 |
| Bsu15I | ATCGAT | 1 cut(s) | 1587 |
| BsuI | GTATCC | 3 cut(s) | 220, 309, 1687 |
| BsuRI | GGCC | 2 cut(s) | 1578, 2264 |
| BsuTUI | ATCGAT | 1 cut(s) | 1587 |
| BtgI | CCRYGG | 1 cut(s) | 2418 |
| BtgZI | GCGATG | 1 cut(s) | 840 |
| BtrI | CACGTC | 1 cut(s) | 1424 |
| BtsCI | GGATG | 8 cut(s) | 177, 727, 748, 855, 1286, 1529, 1579, 1940 |
| BtsIMutI | CAGTG | 2 cut(s) | 53, 906 |
| BveI | ACCTGC | 1 cut(s) | 783 |
| Cac8I | GCNNGC | 4 cut(s) | 562, 566, 1352, 1500 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1722 |
| CciI | TCATGA | 1 cut(s) | 586 |
| Cfr13I | GGNCC | 3 cut(s) | 1324, 1333, 2263 |
| ClaI | ATCGAT | 1 cut(s) | 1587 |
| Csp6I | GTAC | 2 cut(s) | 1025, 1598 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1207, 1242 |
| CviQI | GTAC | 2 cut(s) | 1025, 1598 |
| DdeI | CTNAG | 8 cut(s) | 284, 380, 615, 657, 1355, 1681, 1715, 1928 |
| DraI | TTTAAA | 2 cut(s) | 786, 2157 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1322 |
| EaeI | YGGCCR | 1 cut(s) | 1576 |
| Eam1104I | CTCTTC | 4 cut(s) | 549, 663, 826, 2052 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1322 |
| EarI | CTCTTC | 4 cut(s) | 549, 663, 826, 2052 |
| EciI | GGCGGA | 1 cut(s) | 239 |
| Eco130I | CCWWGG | 3 cut(s) | 1655, 1971, 2418 |
| Eco47I | GGWCC | 2 cut(s) | 1324, 1333 |
| Eco57I | CTGAAG | 2 cut(s) | 1884, 2033 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1324, 2263 |
| EcoRII | CCWGG | 4 cut(s) | 717, 855, 967, 1544 |
| EcoT14I | CCWWGG | 3 cut(s) | 1655, 1971, 2418 |
| EcoT22I | ATGCAT | 1 cut(s) | 1165 |
| ErhI | CCWWGG | 3 cut(s) | 1655, 1971, 2418 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2284, 2316 |
| FbaI | TGATCA | 1 cut(s) | 1248 |
| FblI | GTMKAC | 1 cut(s) | 885 |
| Fnu4HI | GCNGC | 5 cut(s) | 612, 684, 1110, 1208, 2043 |
| FokI | GGATG | 8 cut(s) | 184, 734, 755, 862, 1293, 1516, 1586, 1947 |
| Fsp4HI | GCNGC | 5 cut(s) | 612, 684, 1110, 1208, 2043 |
| FspBI | CTAG | 4 cut(s) | 713, 1656, 1887, 2412 |
| GluI | GCNGC | 5 cut(s) | 612, 684, 1110, 1208, 2043 |
| GsaI | CCCAGC | 1 cut(s) | 848 |
| HaeIII | GGCC | 2 cut(s) | 1578, 2264 |
| HapII | CCGG | 2 cut(s) | 107, 1074 |
| HincII | GTYRAC | 3 cut(s) | 417, 769, 1687 |
| HindII | GTYRAC | 3 cut(s) | 417, 769, 1687 |
| HindIII | AAGCTT | 4 cut(s) | 662, 1765, 1960, 2054 |
| HinfI | GANTC | 8 cut(s) | 95, 539, 791, 914, 1627, 1719, 2022, 2390 |
| HpaII | CCGG | 2 cut(s) | 107, 1074 |
| HphI | GGTGA | 4 cut(s) | 28, 253, 802, 1518 |
| Hpy166II | GTNNAC | 8 cut(s) | 393, 417, 769, 886, 906, 1662, 1687, 1910 |
| Hpy8I | GTNNAC | 8 cut(s) | 393, 417, 769, 886, 906, 1662, 1687, 1910 |
| Hpy99I | CGWCG | 1 cut(s) | 1425 |
| HpyAV | CCTTC | 6 cut(s) | 93, 733, 1262, 1294, 1853, 2310 |
| HpyCH4III | ACNGT | 6 cut(s) | 48, 421, 883, 1024, 1917, 2238 |
| HpyCH4IV | ACGT | 2 cut(s) | 455, 1423 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 1155, 1204, 1495, 1617, 1987, 2128 |
| HpyF3I | CTNAG | 8 cut(s) | 284, 380, 615, 657, 1355, 1681, 1715, 1928 |
| HpySE526I | ACGT | 2 cut(s) | 455, 1423 |
| Ksp22I | TGATCA | 1 cut(s) | 1248 |
| LguI | GCTCTTC | 1 cut(s) | 2052 |
| LmnI | GCTCC | 4 cut(s) | 152, 622, 1183, 2136 |
| Lsp1109I | GCAGC | 5 cut(s) | 598, 695, 1121, 1219, 2054 |
| LweI | GCATC | 3 cut(s) | 598, 1271, 1593 |
| MaeI | CTAG | 4 cut(s) | 713, 1656, 1887, 2412 |
| MaeII | ACGT | 2 cut(s) | 455, 1423 |
| MaeIII | GTNAC | 4 cut(s) | 8, 290, 1603, 1838 |
| MfeI | CAATTG | 1 cut(s) | 1943 |
| MflI | RGATCY | 3 cut(s) | 403, 677, 895 |
| MhlI | GDGCHC | 2 cut(s) | 1180, 1716 |
| MlsI | TGGCCA | 1 cut(s) | 1578 |
| MluNI | TGGCCA | 1 cut(s) | 1578 |
| MlyI | GAGTC | 2 cut(s) | 923, 1621 |
| MmeI | TCCRAC | 4 cut(s) | 1011, 1068, 1205, 2192 |
| Mox20I | TGGCCA | 1 cut(s) | 1578 |
| Mph1103I | ATGCAT | 1 cut(s) | 1165 |
| MroXI | GAANNNNTTC | 1 cut(s) | 543 |
| MscI | TGGCCA | 1 cut(s) | 1578 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1227, 1239, 1709, 2112 |
| Msp20I | TGGCCA | 1 cut(s) | 1578 |
| MspCI | CTTAAG | 2 cut(s) | 1768, 2258 |
| MspI | CCGG | 2 cut(s) | 107, 1074 |
| MspR9I | CCNGG | 5 cut(s) | 108, 719, 857, 969, 1546 |
| MssI | GTTTAAAC | 1 cut(s) | 2157 |
| MunI | CAATTG | 1 cut(s) | 1943 |
| Mva1269I | GAATGC | 3 cut(s) | 1198, 1438, 1500 |
| MvaI | CCWGG | 4 cut(s) | 719, 857, 969, 1546 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 1155, 1204, 1495, 1617, 1987, 2128 |
| NciI | CCSGG | 1 cut(s) | 108 |
| NcoI | CCATGG | 1 cut(s) | 2418 |
| NlaIV | GGNNCC | 4 cut(s) | 105, 405, 838, 1072 |
| NmeAIII | GCCGAG | 2 cut(s) | 899, 2167 |
| NmuCI | GTSAC | 1 cut(s) | 290 |
| NsiI | ATGCAT | 1 cut(s) | 1165 |
| NspI | RCATGY | 3 cut(s) | 282, 1354, 1611 |
| NspV | TTCGAA | 2 cut(s) | 1846, 2241 |
| PaeI | GCATGC | 1 cut(s) | 1354 |
| PagI | TCATGA | 1 cut(s) | 586 |
| PciSI | GCTCTTC | 1 cut(s) | 2052 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2341 |
| PctI | GAATGC | 3 cut(s) | 1198, 1438, 1500 |
| PdmI | GAANNNNTTC | 1 cut(s) | 543 |
| PfeI | GAWTC | 6 cut(s) | 95, 539, 791, 1719, 2022, 2390 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 974 |
| PfoI | TCCNGGA | 2 cut(s) | 106, 717 |
| PkrI | GCNGC | 5 cut(s) | 613, 685, 1111, 1209, 2044 |
| PleI | GAGTC | 2 cut(s) | 922, 1621 |
| PmeI | GTTTAAAC | 1 cut(s) | 2157 |
| PpsI | GAGTC | 2 cut(s) | 922, 1621 |
| PpuMI | RGGWCCY | 1 cut(s) | 1324 |
| Psp5II | RGGWCCY | 1 cut(s) | 1324 |
| Psp6I | CCWGG | 4 cut(s) | 717, 855, 967, 1544 |
| PspFI | CCCAGC | 1 cut(s) | 844 |
| PspGI | CCWGG | 4 cut(s) | 717, 855, 967, 1544 |
| PspN4I | GGNNCC | 4 cut(s) | 105, 405, 838, 1072 |
| PspPI | GGNCC | 3 cut(s) | 1324, 1333, 2263 |
| PspPPI | RGGWCCY | 1 cut(s) | 1324 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 243, 275 |
| PstI | CTGCAG | 1 cut(s) | 685 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1722 |
| PsuI | RGATCY | 3 cut(s) | 403, 677, 895 |
| RsaI | GTAC | 2 cut(s) | 1026, 1599 |
| RsaNI | GTAC | 2 cut(s) | 1025, 1598 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1227, 1239, 1709, 2112 |
| SapI | GCTCTTC | 1 cut(s) | 2052 |
| SatI | GCNGC | 5 cut(s) | 612, 684, 1110, 1208, 2043 |
| Sau96I | GGNCC | 3 cut(s) | 1324, 1333, 2263 |
| SchI | GAGTC | 2 cut(s) | 923, 1621 |
| ScrFI | CCNGG | 5 cut(s) | 108, 719, 857, 969, 1546 |
| SduI | GDGCHC | 2 cut(s) | 1180, 1716 |
| SfaNI | GCATC | 3 cut(s) | 598, 1271, 1593 |
| SfcI | CTRYAG | 3 cut(s) | 87, 681, 2217 |
| SfuI | TTCGAA | 2 cut(s) | 1846, 2241 |
| SinI | GGWCC | 2 cut(s) | 1324, 1333 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1227, 1239, 1709, 2112 |
| SmlI | CTYRAG | 3 cut(s) | 1768, 1982, 2258 |
| SmoI | CTYRAG | 3 cut(s) | 1768, 1982, 2258 |
| SphI | GCATGC | 1 cut(s) | 1354 |
| SsiI | CCGC | 1 cut(s) | 224 |
| SspI | AATATT | 1 cut(s) | 1096 |
| SspMI | CTAG | 4 cut(s) | 713, 1656, 1887, 2412 |
| StyD4I | CCNGG | 5 cut(s) | 106, 717, 855, 967, 1544 |
| StyI | CCWWGG | 3 cut(s) | 1655, 1971, 2418 |
| TaaI | ACNGT | 6 cut(s) | 48, 421, 883, 1024, 1917, 2238 |
| TaiI | ACGT | 2 cut(s) | 458, 1426 |
| TaqI | TCGA | 3 cut(s) | 1587, 1846, 2241 |
| TaqII | GACCGA | 1 cut(s) | 1199 |
| TatI | WGTACW | 1 cut(s) | 1024 |
| TfiI | GAWTC | 6 cut(s) | 95, 539, 791, 1719, 2022, 2390 |
| TscAI | CASTG | 2 cut(s) | 53, 913 |
| TseFI | GTSAC | 1 cut(s) | 290 |
| TseI | GCWGC | 5 cut(s) | 611, 683, 1109, 1207, 2042 |
| Tsp45I | GTSAC | 1 cut(s) | 290 |
| TspGWI | ACGGA | 1 cut(s) | 1523 |
| TspRI | CASTG | 2 cut(s) | 53, 913 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 974 |
| Vha464I | CTTAAG | 2 cut(s) | 1768, 2258 |
| VpaK11BI | GGWCC | 2 cut(s) | 1324, 1333 |
| XapI | RAATTY | 4 cut(s) | 113, 1757, 2196, 2438 |
| XceI | RCATGY | 3 cut(s) | 282, 1354, 1611 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 994, 1567 |
| XmaJI | CCTAGG | 1 cut(s) | 1655 |
| XmiI | GTMKAC | 1 cut(s) | 885 |
| XmnI | GAANNNNTTC | 1 cut(s) | 543 |
| XspI | CTAG | 4 cut(s) | 713, 1656, 1887, 2412 |
| Zsp2I | ATGCAT | 1 cut(s) | 1165 |