disease resistance
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19050 AT5G45510 AT5G45510 |
| fragaria_vesca | FvH4_6g22120 |
| malus_domestica | MD14G1055300.v1.1 |
| prunus_persica | Prupe.7G078000_v2.0.a1 Prupe.7G078200_v2.0.a1 |
| pyrus_communis | pycom14g04560 |
| rosa_chinensis | RchiOBHm_Chr3g0479451 |
| rosa_laevigata | RLG00000023571 RLG00000023572 RLG00000023574 |
| rosa_multiflora | Rmu_sc0003405.1_g000008 Rmu_sc0004732.1_g000021 Rmu_sc0015035.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00402260 |
| rosa_rugosa | Rorug03G0175400 |
| rosa_samantha | Rh3AG226600 Rh3BG259700 Rh3CG255700 Rh3DG251800 |
| rosa_wichuraiana | Rw3G020230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 1663 |
| AclWI | GGATC | 3 cut(s) | 410, 475, 2164 |
| AcsI | RAATTY | 7 cut(s) | 98, 428, 867, 1962, 2078, 2658, 2808 |
| AcuI | CTGAAG | 3 cut(s) | 704, 2071, 3008 |
| AfaI | GTAC | 2 cut(s) | 1584, 2099 |
| AflII | CTTAAG | 1 cut(s) | 439 |
| AflIII | ACRYGT | 3 cut(s) | 2365, 2665, 2815 |
| AgeI | ACCGGT | 1 cut(s) | 2263 |
| AjnI | CCWGG | 5 cut(s) | 215, 2308, 2352, 2652, 3012 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2981, 3013 |
| AleI | CACNNNNGTG | 1 cut(s) | 236 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 1608, 1609, 1640, 1641, 1991, 2023 |
| Alw21I | GWGCWC | 1 cut(s) | 387 |
| Alw26I | GTCTC | 4 cut(s) | 693, 2171, 2198, 3022 |
| AlwI | GGATC | 3 cut(s) | 410, 475, 2164 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 393 |
| AoxI | GGCC | 1 cut(s) | 1255 |
| ApeKI | GCWGC | 1 cut(s) | 1804 |
| ApoI | RAATTY | 7 cut(s) | 98, 428, 867, 1962, 2078, 2658, 2808 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1264, 1296 |
| AseI | ATTAAT | 1 cut(s) | 738 |
| AsiGI | ACCGGT | 1 cut(s) | 2263 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1392, 1965, 2511 |
| AspA2I | CCTAGG | 1 cut(s) | 326 |
| AspS9I | GGNCC | 1 cut(s) | 4 |
| AsuHPI | GGTGA | 2 cut(s) | 189, 1475 |
| AsuII | TTCGAA | 2 cut(s) | 517, 2400 |
| AvaII | GGWCC | 1 cut(s) | 4 |
| AvrII | CCTAGG | 1 cut(s) | 326 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2276, 2309 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1575, 1607 |
| BbsI | GAAGAC | 3 cut(s) | 1110, 2505, 2655 |
| Bbv12I | GWGCWC | 1 cut(s) | 387 |
| BbvI | GCAGC | 1 cut(s) | 1816 |
| BccI | CCATC | 7 cut(s) | 208, 239, 1243, 1462, 1496, 2045, 2338 |
| BciT130I | CCWGG | 5 cut(s) | 217, 2310, 2354, 2654, 3014 |
| BciVI | GTATCC | 2 cut(s) | 358, 1410 |
| BclI | TGATCA | 1 cut(s) | 82 |
| BcoDI | GTCTC | 4 cut(s) | 693, 2171, 2198, 3022 |
| BfmI | CTRYAG | 1 cut(s) | 1620 |
| BfrI | CTTAAG | 1 cut(s) | 439 |
| BfuI | GTATCC | 2 cut(s) | 358, 1410 |
| BglII | AGATCT | 1 cut(s) | 1054 |
| BisI | GCNGC | 1 cut(s) | 1805 |
| BlnI | CCTAGG | 1 cut(s) | 326 |
| BlsI | GCNGC | 1 cut(s) | 1806 |
| Bme1390I | CCNGG | 5 cut(s) | 217, 2310, 2354, 2654, 3014 |
| Bme18I | GGWCC | 1 cut(s) | 4 |
| BmgT120I | GGNCC | 1 cut(s) | 4 |
| BmiI | GGNNCC | 2 cut(s) | 1268, 1753 |
| BmrFI | CCNGG | 5 cut(s) | 217, 2310, 2354, 2654, 3014 |
| BmrI | ACTGGG | 1 cut(s) | 1891 |
| BmsI | GCATC | 4 cut(s) | 264, 495, 2322, 2992 |
| BmuI | ACTGGG | 1 cut(s) | 1891 |
| BpiI | GAAGAC | 3 cut(s) | 1110, 2505, 2655 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1621, 1653 |
| BpmI | CTGGAG | 3 cut(s) | 1358, 1751, 2978 |
| Bpu14I | TTCGAA | 2 cut(s) | 517, 2400 |
| BpuEI | CTTGAG | 6 cut(s) | 470, 519, 638, 1550, 1616, 1843 |
| Bsa29I | ATCGAT | 1 cut(s) | 258 |
| BsaI | GGTCTC | 1 cut(s) | 3022 |
| BsaJI | CCNNGG | 6 cut(s) | 216, 326, 351, 642, 857, 1089 |
| BsaWI | WCCGGW | 3 cut(s) | 2263, 2614, 2914 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 1307, 1337, 3002 |
| Bse118I | RCCGGY | 1 cut(s) | 2263 |
| Bse1I | ACTGG | 9 cut(s) | 204, 344, 540, 1041, 1341, 1886, 2760, 2910, 2995 |
| Bse3DI | GCAATG | 6 cut(s) | 85, 250, 2433, 2583, 2733, 2883 |
| BseBI | CCWGG | 5 cut(s) | 217, 2310, 2354, 2654, 3014 |
| BseCI | ATCGAT | 1 cut(s) | 258 |
| BseDI | CCNNGG | 6 cut(s) | 216, 326, 351, 642, 857, 1089 |
| BseGI | GGATG | 9 cut(s) | 200, 594, 611, 1454, 1488, 1891, 2080, 2330, 3007 |
| BseMI | GCAATG | 6 cut(s) | 85, 250, 2433, 2583, 2733, 2883 |
| BseMII | CTCAG | 3 cut(s) | 400, 1443, 1507 |
| BseNI | ACTGG | 9 cut(s) | 204, 344, 540, 1041, 1341, 1886, 2760, 2910, 2995 |
| BseRI | GAGGAG | 5 cut(s) | 794, 2488, 2638, 2788, 2938 |
| BseXI | GCAGC | 1 cut(s) | 1816 |
| BseYI | CCCAGC | 1 cut(s) | 2337 |
| BshFI | GGCC | 1 cut(s) | 1257 |
| BshTI | ACCGGT | 1 cut(s) | 2263 |
| BshVI | ATCGAT | 1 cut(s) | 258 |
| BsiHKAI | GWGCWC | 1 cut(s) | 387 |
| BsiSI | CCGG | 4 cut(s) | 2264, 2465, 2615, 2915 |
| BslFI | GGGAC | 1 cut(s) | 254 |
| BsmAI | GTCTC | 4 cut(s) | 693, 2171, 2198, 3022 |
| BsmFI | GGGAC | 1 cut(s) | 254 |
| BsmI | GAATGC | 1 cut(s) | 171 |
| BsnI | GGCC | 1 cut(s) | 1257 |
| Bso31I | GGTCTC | 1 cut(s) | 3022 |
| Bsp119I | TTCGAA | 2 cut(s) | 517, 2400 |
| Bsp1286I | GDGCHC | 1 cut(s) | 387 |
| Bsp19I | CCATGG | 1 cut(s) | 1089 |
| BspACI | CCGC | 1 cut(s) | 1663 |
| BspANI | GGCC | 1 cut(s) | 1257 |
| BspCNI | CTCAG | 3 cut(s) | 399, 1442, 1506 |
| BspDI | ATCGAT | 1 cut(s) | 258 |
| BspLI | GGNNCC | 2 cut(s) | 1268, 1753 |
| BspMAI | CTGCAG | 1 cut(s) | 1624 |
| BspPI | GGATC | 3 cut(s) | 410, 475, 2164 |
| BspT104I | TTCGAA | 2 cut(s) | 517, 2400 |
| BspTI | CTTAAG | 1 cut(s) | 439 |
| BspTNI | GGTCTC | 1 cut(s) | 3022 |
| BsrDI | GCAATG | 6 cut(s) | 85, 250, 2433, 2583, 2733, 2883 |
| BsrFI | RCCGGY | 1 cut(s) | 2263 |
| BsrI | ACTGG | 9 cut(s) | 204, 344, 540, 1041, 1341, 1886, 2760, 2910, 2995 |
| BssAI | RCCGGY | 1 cut(s) | 2263 |
| BssECI | CCNNGG | 6 cut(s) | 216, 326, 351, 642, 857, 1089 |
| BssT1I | CCWWGG | 3 cut(s) | 326, 642, 1089 |
| Bst2UI | CCWGG | 5 cut(s) | 217, 2310, 2354, 2654, 3014 |
| Bst4CI | ACNGT | 4 cut(s) | 588, 709, 909, 2847 |
| Bst6I | CTCTTC | 3 cut(s) | 723, 1692, 2517 |
| BstAFI | CTTAAG | 1 cut(s) | 439 |
| BstBI | TTCGAA | 2 cut(s) | 517, 2400 |
| BstC8I | GCNNGC | 4 cut(s) | 23, 171, 1667, 2946 |
| BstDEI | CTNAG | 9 cut(s) | 92, 386, 599, 808, 1277, 1429, 1493, 1721, 2172 |
| BstDSI | CCRYGG | 1 cut(s) | 1089 |
| BstF5I | GGATG | 9 cut(s) | 200, 594, 611, 1454, 1488, 1891, 2080, 2330, 3007 |
| BstMAI | GTCTC | 4 cut(s) | 693, 2171, 2198, 3022 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 658, 799, 1126, 1273, 1662, 1726, 1813 |
| BstNI | CCWGG | 5 cut(s) | 217, 2310, 2354, 2654, 3014 |
| BstNSI | RCATGY | 4 cut(s) | 25, 282, 2369, 2819 |
| BstSCI | CCNGG | 5 cut(s) | 215, 2308, 2352, 2652, 3012 |
| BstSFI | CTRYAG | 1 cut(s) | 1620 |
| BstV1I | GCAGC | 1 cut(s) | 1816 |
| BstV2I | GAAGAC | 3 cut(s) | 1110, 2505, 2655 |
| BstX2I | RGATCY | 1 cut(s) | 1054 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1995 |
| BstYI | RGATCY | 1 cut(s) | 1054 |
| Bsu15I | ATCGAT | 1 cut(s) | 258 |
| BsuI | GTATCC | 2 cut(s) | 358, 1410 |
| BsuRI | GGCC | 1 cut(s) | 1257 |
| BsuTUI | ATCGAT | 1 cut(s) | 258 |
| BtgI | CCRYGG | 1 cut(s) | 1089 |
| BtsCI | GGATG | 9 cut(s) | 200, 594, 611, 1454, 1488, 1891, 2080, 2330, 3007 |
| BtsI | GCAGTG | 1 cut(s) | 2065 |
| BtsIMutI | CAGTG | 4 cut(s) | 547, 1034, 2065, 2843 |
| Cac8I | GCNNGC | 4 cut(s) | 23, 171, 1667, 2946 |
| CaiI | CAGNNNCTG | 1 cut(s) | 393 |
| Cfr10I | RCCGGY | 1 cut(s) | 2263 |
| Cfr13I | GGNCC | 1 cut(s) | 4 |
| ClaI | ATCGAT | 1 cut(s) | 258 |
| CsiI | ACCWGGT | 1 cut(s) | 3012 |
| Csp6I | GTAC | 2 cut(s) | 1583, 2098 |
| CspAI | ACCGGT | 1 cut(s) | 2263 |
| CviQI | GTAC | 2 cut(s) | 1583, 2098 |
| DdeI | CTNAG | 9 cut(s) | 92, 386, 599, 808, 1277, 1429, 1493, 1721, 2172 |
| DraI | TTTAAA | 2 cut(s) | 499, 1800 |
| Eam1104I | CTCTTC | 3 cut(s) | 723, 1692, 2517 |
| EarI | CTCTTC | 3 cut(s) | 723, 1692, 2517 |
| EciI | GGCGGA | 1 cut(s) | 1652 |
| Eco130I | CCWWGG | 3 cut(s) | 326, 642, 1089 |
| Eco147I | AGGCCT | 1 cut(s) | 1257 |
| Eco31I | GGTCTC | 1 cut(s) | 3022 |
| Eco32I | GATATC | 2 cut(s) | 456, 1782 |
| Eco47I | GGWCC | 1 cut(s) | 4 |
| Eco57I | CTGAAG | 3 cut(s) | 704, 2071, 3008 |
| EcoRI | GAATTC | 1 cut(s) | 98 |
| EcoRII | CCWGG | 5 cut(s) | 215, 2308, 2352, 2652, 3012 |
| EcoRV | GATATC | 2 cut(s) | 456, 1782 |
| EcoT14I | CCWWGG | 3 cut(s) | 326, 642, 1089 |
| ErhI | CCWWGG | 3 cut(s) | 326, 642, 1089 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 955, 987 |
| FaqI | GGGAC | 1 cut(s) | 254 |
| FauNDI | CATATG | 1 cut(s) | 1122 |
| FbaI | TGATCA | 1 cut(s) | 82 |
| Fnu4HI | GCNGC | 1 cut(s) | 1805 |
| FokI | GGATG | 9 cut(s) | 187, 581, 618, 1441, 1475, 1898, 2087, 2317, 3014 |
| Fsp4HI | GCNGC | 1 cut(s) | 1805 |
| GluI | GCNGC | 1 cut(s) | 1805 |
| GsaI | CCCAGC | 1 cut(s) | 2341 |
| GsuI | CTGGAG | 3 cut(s) | 1358, 1751, 2978 |
| HaeIII | GGCC | 1 cut(s) | 1257 |
| HapII | CCGG | 4 cut(s) | 2264, 2465, 2615, 2915 |
| HincII | GTYRAC | 2 cut(s) | 358, 1879 |
| HindII | GTYRAC | 2 cut(s) | 358, 1879 |
| HindIII | AAGCTT | 5 cut(s) | 436, 631, 892, 1238, 1274 |
| HpaII | CCGG | 4 cut(s) | 2264, 2465, 2615, 2915 |
| HphI | GGTGA | 2 cut(s) | 189, 1475 |
| Hpy166II | GTNNAC | 6 cut(s) | 333, 358, 581, 1688, 1879, 2098 |
| Hpy8I | GTNNAC | 6 cut(s) | 333, 358, 581, 1688, 1879, 2098 |
| HpyAV | CCTTC | 7 cut(s) | 524, 981, 1123, 1247, 1947, 2032, 2036 |
| HpyCH4III | ACNGT | 4 cut(s) | 588, 709, 909, 2847 |
| HpyCH4IV | ACGT | 2 cut(s) | 289, 2667 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 658, 799, 1126, 1273, 1662, 1726, 1813 |
| HpyF3I | CTNAG | 9 cut(s) | 92, 386, 599, 808, 1277, 1429, 1493, 1721, 2172 |
| HpySE526I | ACGT | 2 cut(s) | 289, 2667 |
| Ksp22I | TGATCA | 1 cut(s) | 82 |
| LmnI | GCTCC | 7 cut(s) | 807, 1272, 2475, 2625, 2775, 2925, 2997 |
| Lsp1109I | GCAGC | 1 cut(s) | 1816 |
| LweI | GCATC | 4 cut(s) | 264, 495, 2322, 2992 |
| MabI | ACCWGGT | 1 cut(s) | 3012 |
| MaeII | ACGT | 2 cut(s) | 289, 2667 |
| MaeIII | GTNAC | 4 cut(s) | 274, 509, 1892, 1928 |
| MfeI | CAATTG | 2 cut(s) | 614, 2288 |
| MflI | RGATCY | 1 cut(s) | 1054 |
| MhlI | GDGCHC | 1 cut(s) | 387 |
| MlyI | GAGTC | 2 cut(s) | 1639, 2200 |
| MmeI | TCCRAC | 2 cut(s) | 453, 2979 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1392, 1965, 2511 |
| MslI | CAYNNNNRTG | 4 cut(s) | 236, 380, 786, 2025 |
| MspA1I | CMGCKG | 1 cut(s) | 2948 |
| MspCI | CTTAAG | 1 cut(s) | 439 |
| MspI | CCGG | 4 cut(s) | 2264, 2465, 2615, 2915 |
| MspR9I | CCNGG | 5 cut(s) | 217, 2310, 2354, 2654, 3014 |
| MunI | CAATTG | 2 cut(s) | 614, 2288 |
| Mva1269I | GAATGC | 1 cut(s) | 171 |
| MvaI | CCWGG | 5 cut(s) | 217, 2310, 2354, 2654, 3014 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 658, 799, 1126, 1273, 1662, 1726, 1813 |
| NcoI | CCATGG | 1 cut(s) | 1089 |
| NdeI | CATATG | 1 cut(s) | 1122 |
| NlaIV | GGNNCC | 2 cut(s) | 1268, 1753 |
| NmeAIII | GCCGAG | 1 cut(s) | 838 |
| NmuCI | GTSAC | 2 cut(s) | 1892, 1928 |
| NspI | RCATGY | 4 cut(s) | 25, 282, 2369, 2819 |
| NspV | TTCGAA | 2 cut(s) | 517, 2400 |
| OliI | CACNNNNGTG | 1 cut(s) | 236 |
| PaeI | GCATGC | 1 cut(s) | 25 |
| PceI | AGGCCT | 1 cut(s) | 1257 |
| PciI | ACATGT | 2 cut(s) | 2365, 2815 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1012 |
| PctI | GAATGC | 1 cut(s) | 171 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1392, 1965, 2511 |
| PflFI | GACNNNGTC | 1 cut(s) | 3014 |
| PinAI | ACCGGT | 1 cut(s) | 2263 |
| PkrI | GCNGC | 1 cut(s) | 1806 |
| PleI | GAGTC | 2 cut(s) | 1638, 2200 |
| PpsI | GAGTC | 2 cut(s) | 1638, 2200 |
| PscI | ACATGT | 2 cut(s) | 2365, 2815 |
| PshBI | ATTAAT | 1 cut(s) | 738 |
| Psp6I | CCWGG | 5 cut(s) | 215, 2308, 2352, 2652, 3012 |
| PspFI | CCCAGC | 1 cut(s) | 2337 |
| PspGI | CCWGG | 5 cut(s) | 215, 2308, 2352, 2652, 3012 |
| PspN4I | GGNNCC | 2 cut(s) | 1268, 1753 |
| PspPI | GGNCC | 1 cut(s) | 4 |
| PstI | CTGCAG | 1 cut(s) | 1624 |
| PstNI | CAGNNNCTG | 1 cut(s) | 393 |
| PsuI | RGATCY | 1 cut(s) | 1054 |
| PsyI | GACNNNGTC | 1 cut(s) | 3014 |
| PvuII | CAGCTG | 1 cut(s) | 2948 |
| RsaI | GTAC | 2 cut(s) | 1584, 2099 |
| RsaNI | GTAC | 2 cut(s) | 1583, 2098 |
| RseI | CAYNNNNRTG | 4 cut(s) | 236, 380, 786, 2025 |
| SatI | GCNGC | 1 cut(s) | 1805 |
| Sau96I | GGNCC | 1 cut(s) | 4 |
| SchI | GAGTC | 2 cut(s) | 1639, 2200 |
| ScrFI | CCNGG | 5 cut(s) | 217, 2310, 2354, 2654, 3014 |
| SduI | GDGCHC | 1 cut(s) | 387 |
| SexAI | ACCWGGT | 1 cut(s) | 3012 |
| SfaNI | GCATC | 4 cut(s) | 264, 495, 2322, 2992 |
| SfcI | CTRYAG | 1 cut(s) | 1620 |
| SfuI | TTCGAA | 2 cut(s) | 517, 2400 |
| SinI | GGWCC | 1 cut(s) | 4 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 236, 380, 786, 2025 |
| SmlI | CTYRAG | 7 cut(s) | 439, 449, 534, 653, 1529, 1595, 1822 |
| SmoI | CTYRAG | 7 cut(s) | 439, 449, 534, 653, 1529, 1595, 1822 |
| SphI | GCATGC | 1 cut(s) | 25 |
| SseBI | AGGCCT | 1 cut(s) | 1257 |
| SsiI | CCGC | 1 cut(s) | 1663 |
| StuI | AGGCCT | 1 cut(s) | 1257 |
| StyD4I | CCNGG | 5 cut(s) | 215, 2308, 2352, 2652, 3012 |
| StyI | CCWWGG | 3 cut(s) | 326, 642, 1089 |
| TaaI | ACNGT | 4 cut(s) | 588, 709, 909, 2847 |
| TaiI | ACGT | 2 cut(s) | 292, 2670 |
| TaqI | TCGA | 7 cut(s) | 258, 517, 697, 1135, 2400, 2700, 2850 |
| TatI | WGTACW | 1 cut(s) | 2097 |
| TscAI | CASTG | 4 cut(s) | 547, 1041, 2072, 2850 |
| TseFI | GTSAC | 2 cut(s) | 1892, 1928 |
| TseI | GCWGC | 1 cut(s) | 1804 |
| Tsp45I | GTSAC | 2 cut(s) | 1892, 1928 |
| TspRI | CASTG | 4 cut(s) | 547, 1041, 2072, 2850 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3014 |
| Vha464I | CTTAAG | 1 cut(s) | 439 |
| VpaK11BI | GGWCC | 1 cut(s) | 4 |
| VspI | ATTAAT | 1 cut(s) | 738 |
| XapI | RAATTY | 7 cut(s) | 98, 428, 867, 1962, 2078, 2658, 2808 |
| XbaI | TCTAGA | 1 cut(s) | 2296 |
| XceI | RCATGY | 4 cut(s) | 25, 282, 2369, 2819 |
| XmaJI | CCTAGG | 1 cut(s) | 326 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1392, 1965, 2511 |