Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003731

Physical Location & Seq

Genomic Coordinates Reverse (-)

20036988 .. 20046702

Gene Structure 9715 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G49430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5034 bp

ATGGCTCTTAGGAAAAATACTCCAAAAGGCGATTCAGTTTCACTACCTATGAAGCCTTTGAATTTCTCCAGAAAATTGCCAGGAAATGTGCAGATTCCAGACCCTGATATTGTTCAAAGTGTTGCGCCTAACATTGATCTAGACCTCCGGGAAGTTTACTTTTTGATGCTCCACTTACTTTCATCTGGGCCGTGCCAGAAAACTTATGCACTGTTGCGGCATGAACTTCTTGAACATGAGCTTCTTCCTAGAAGATATCATGCTTGGTACTCGAGGAGTGGATTGCCTAGTGGGGATGAGAATGATGATGGCAATTCCTTTCCTTTGAACTATACTGAGTTGGCTAAGAGGTATTCTCATGTAAAAAAAGATCACCTGGTGGAGCTTCTAAAGCAATTGGTCTTTGTTTCAAATAGGCCTAATCCCTCACGAGGGATCGGTGATGGAAATAAAATGATTGGAGCTGGGGTTCCAACACTTTTAGGCACTGGCTCGTTCTCCCTTTTGAGCTCTGACAAGGAAATAGTTGGAAGTGATCTCAAACCACCACCTATTGGCATGCGTTGGCCTCATATGCATGCTGATCAGGTTCGTGGTATTAGTTTGAGGGAAATTGGTGGTGGTTTTGCCAGACATCATCGTGCCCCATCAATTCGAGCAGCATGTTACGTCATTGCAAAACCATCGTCAATGGTACAAAAGATGCAGAACATCAAGAGGCTACGTGGACACAGAAATGCTGTGTACTGTGCTATATTAGATCGCTCAGGAAGGTATGTAATCACTGGTTCAGATGACCGCCTTGTAAAAGTATGGTCGATGGATACTGCATACTGCCTGGCCAGCTGTCGAGGGCATGAAGGTGACATAACTGATCTTGCTGTGAGTTCGAACAACATTTTCATAGCATCCGCATCAAATGATTGTGTGATCCGCGTTTGGCGATTGCCAGATGGCTTACCAGTTTCTGTTCTCCGTGGACATACTGGAGCTGTTACTGCTATTGCCTTTAGTCCCAGACCTGGATCCCCGTACCAGCTTCTCTCATCGTCTGATGATGGTACATGTAGGATATGGGATGCCCGGGGAGCCCAATTTGCTCCCCGGATATATGTCCCTAGGCCTCCTAGTCCTGATGGAAAGAACAGTGGCCCTTCTTCTAGTAATGCTCAGCAGAGTCACCAAATCTTTTGCTGTGCATTCAATGCTAGTGGATCTGTCTTTGTCACTGGCAGTTCTGACACTCTTGCTAGAGTATACTCGGTTTGGAGTGCTAATAAGACCAATACTGATGATCCAGAGCAGCCAAATCATGAGATGGATGTTCTGGCTGGACATGAGAATGATGTTAATTATGTTCAGTTCAGTGGTTGTGCTGCGGGGTCTAAATTTTCTGTAACTGACTACTCAAAAGACGAGAATGTTCCAAAATTTAAGAATTCCTGGTTTTGTCATGATAACATAGTTACATGCTCTCGTGATGGTAGTGCAATCATTTGGATCCCAAGATTACGGAGATCTCATGGAAAAAGCTGCCGATGGACACGAGCATATCATCTCAAGGTTCCACCTCCGCCCATGCCCCCTCAACCTCCTAGAGGGGGGCCACGTCAAAGGATCCTACCTACACCCCGTGGGGTTAACATGATTGCTTGGAGTCTGGATAATCGTTTTGTCCTTGCCGCTATTATGGATTGTAGAATATGCGTGTGGAATGCCTCTGATGGTAGCTTGGTACATTCTTTGACTGGTCATACAGCATCTACATATGTTATGGACGTCCATCCATTCAATCCTCGTATAGCTATGAGTGCTGGCTATGATGGAAAAACAATAGTGTGGGATATATGGGAAGGCATACCTATACAAATATACGACATTTCACACTACAAGTTGGTTGATGGGAAGTTTTCACCGGATGGAACTTCAATTATACTTTCAGATGATGTGGGCCAATTGTACATATTAAGTACTGGCCAAGGGGATTCTCAAAAAGACGCTAAATATGATCAGTTCTTCCTGGGGGATTATCGTCCATTAATTCAGGACACATATGGTAATGTCCTTGACCAGGAATCTCAGCTTCAACCTTATCGCCGAAATATGGAGGATCCTCTTTGTGATTCAGGGATGATTCCATATGAAGAGCCATATCAGACCACGTTTCAGAAACGGCGACTCGGCGCCTTAGGCAAAGAATGGCGACCATCTTCTTTGAAGCTTGCTGTCGGGCCAGATATCACTTTAGATCGAGATTACCAAATGCCACCTCTGGCAGATCTAGACTTAGCCGAACCGTTGCCAGAGTTTATAGATGTAATGGAGTGGGAACCAGAAGTTGATATCTTAAGTGATGAAAACGACTCTGAATACAATGTGCCAGAGGAGTATTCGTCTGGAAAAGAGCAAGAATGTTTAAATTCTTCAACCTCTGGTGAGTCAGGTTCCAGTTCTGGTGAAAGCTATGAGGATGATGATCATCAGAATAGCCTTAGAAGATCCAAAAGGAAAAAACATAAGAAAGAAGCTGGGATCATGACTTCTTCGGGTAGGCGTGTCAAAAAGAGGAACTTTGATGAGCTTGAGGGAGCTCCAAGCAACAAAAAACGTACCAGAAAATCTAGGAGTGGTCGTAAAGAATCGAAGAGGAAATCTTCAAAATCTAAATCGTCTAGACCTAGGCGAGCAGCTGCACGAAATGCTCTCTCTTGGTTTTCTAAGATTACAGGTACATCTAAAGATGCAGAAGAGGAGGAAGTCTCTGAATTGAGTGATTCATCAGAAAGTGAATCGACAACACAAGACTCAGGTACTGGGGATAGTGAACTTGAAGTAGCTTTGTTAAATGGGCATGGGAAGCAATCGAAGGGGAAAACTATCCTCGTATGTGATTCTGATGATGGGGCTCAACAATGTGATATCAGAGAAACTCATACTGCTGAAAGGAGGAGATTGGTTCTTAGATTTCCTGTTAGGAATTCAGATAAGCTTACCTTACTGGAGAACCTACCTGGATCATCTTGTGATGTTCCAAGTCCAACTTTAGGGAACGGCTGTACTGAAGACTCGAGGATTCCTGGGAACCAATTTGAAGGGCTAGATGTAAGTAAAGTCAAATGGGGAATGGTTAAGGCTCGTACAACAAAGCGAATAAGAGGTGAAGCAATATCATCGCATGAACTTATGGGCTCTGACCCGGAGGGAAAGGAAAATAATGTTAAGGAAGACTCAAATCACCGTGGAAATGGTGTTACAGCACCTAGTTGTTTGGAATTGAAAACAGATATAGATGACATGGCAGTTGACACTGACACGGTGATCTCTAATGGTTTGCCAAATGGTGGGAAGCGATATCCAGAACTGGATGGGTCACCAAGTCGAGTGGCTGATGACAAGGCCTCTAATAGTTCTCAAAATGTAACCCACCGGCACGATCTAATAGATAGCCTTCCACCAATCTCAACGACATTGAAGATACGCTCCAAGAGAGTTTCAAGGGCTCCGGATACATCTTTGAGGCAAGAAGGAAAATCCTTATCAATAGATCAAGAGACTGGTGGCTCTGATGCATTAAATGATGGTTTTGAAGATGCTAAATGTGATTTGACATTGGACTGTCAAAAGGATGGTGTGGTTGGGACAGAGATATCTCTGCGAAATGATTGTGTTCTGGAATTAAATCCTCAGATCTGTGATGCGCTCTCAATTGCTAATGATGTTCCTGTGTCACACTCACATCCTAAACGGATGTTTGATTTTGTCTATAGACGAAAGTCACGGAAGCATAAGAACAACTTAGACAGGGATGCTGCTCTTACTAAAGAAGTCAGTCCAGGTTCTTGTAGTCAGGATCATGGTAGTGGCTCTAAGTCCCATGAAGGTGCCTCTAATGGGTTCCATGGGACTGAGTTGAATGGATTAGAGAAGTCGGAAGGCAGTTTGACCCACATCCAAGATAAAATAAGTGATTCACGTGGAAACCAAAACTCTCAGGAAGAATTGAGATCCGCTTCTGGAGCAACACTTCGGTTGAGATCCACAAGAAATAGAAAGTCTACTTATCCCTTTAGTGAAACTAAACCTATTGAAACAAAGAAGCCTCAGCAGTTAATAGAAAATGTATCCTGGTTGACATTATCGATACATGAAGAGGGTTCTCGTTATATTCCACAAATGGGGGATGAAGTTGCGTATTTGCGACAGGGGCATCAAGAATACTTAAACTTTAGCTCCCTGAGGGAAGTGGCTCCTTGGACATCAATAAAAGGAGGAAATATAAAGGCTGTAGAAATTTGTAAAGTGGAAAGTCTTGAATATGCAACTCTGCCTGGTTCTGGGGATAGCTGCTGCAAAATGATACTTAAGGTCATCGATCCAAACTCCGAAGTGTTCAACAAAGCTTTCAAACTTACGTTGCCTGAAGTGGTGACGTTTCCAGATTTTCTTGTGGAAAGAAGTCGGTATGAAGCAGCAATACAGAGGAACTGGACTTGCAGGGACAAGTGTAAAGTTTGGTGGAGAGACGAAGGCGAAGAAGATGGTAGTTGGTGGGAAGGACGGATTCTAGCTGTGAAACCCAAATCACCTGATTTTCCTGATAGTCCGTGGGAGAGGTACACAGTTAAGTACAAGAGTGACCCTGCCGAGACACATCTTCACAGTCCCTGGGAGCTTTTTGATGCAGATACCAAGTGGGAGCAGCCTCACATTGATGATGAGCAACGAAACCGTTTGCTCTCGGCCTTAACAAAGTTAGAGACTTCAGACAAGAGAACCCAGGATTCTTTTGGCCTCCGAAAACTGAACCAGACCGTGGGAAATTCCAGCTACTCCAACAGGTTCCCAGTTCCTTTGTCTCTTGAAGTAATCAGATCAAGGCTTGAGAACAACTATTACCGAAGTGTGGAAGCATTACGACACGACGTATCAGTTATGTTGTCCAATGCAGAGACTTTCTTTGGTCGAAATAAAAGTGTAGCAGCCAAAATCTCAAATCTCTCTAACTGGTTCGACCGGACGCTACCTTCTTCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005829 GO:0006325 GO:0006355 GO:0006357 GO:0006996 GO:0007010 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008360 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019221 GO:0019222 GO:0022603 GO:0022604 GO:0023052 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0034097 GO:0038111 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071310 GO:0071345 GO:0071840 GO:0080090 GO:0098760 GO:0098761 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_resp Bromodomain WD40

Protein Analysis

1677

Amino Acids

186.92

Weight (kDa)

6.66

Isoelectric Point (pI)

48.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BRWD1_N	PF25437	42 - 135	3.7e-29	BRWD1-like, N-terminal domain
Beta-prop_TEP1_2nd	PF25047	230 - 366	3e-12	TEP-1 second beta-propeller
Beta-prop_THOC3	PF25174	232 - 319	5.8e-18	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	232 - 364	6.1e-15	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	232 - 362	1.1e-22	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	234 - 365	2.5e-25	WDR5 beta-propeller domain
WD40_Prp19	PF24814	234 - 316	2.7e-11	Prp19 WD40 domain
WD40	PF00400	237 - 273	1.1e-06	WD domain, G-beta repeat
WD40_Gbeta	PF25391	239 - 365	1.6e-12	G protein beta WD-40 repeat protein
Beta-prop_WDR3_2nd	PF25172	239 - 315	9.8e-11	WDR3 second beta-propeller domain
WD40_MABP1-WDR62_2nd	PF24782	244 - 359	7.4e-08	MABP1/WDR62 second WD40 domain
Beta-prop_EML_2	PF23414	245 - 363	1.8e-06	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_SCAP	PF24017	256 - 360	7.4e-10	SCAP Beta-propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	275 - 340	7.7e-07	WDR36/Utp21 second beta-propeller domain
WD40	PF00400	279 - 314	1.5e-07	WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1	PF24105	282 - 375	1.3e-07	CAF1B/HIR1 beta-propeller domain
WD40_WDHD1_1st	PF24817	289 - 362	2.9e-10	WDHD1 first WD40 domain
Beta-prop_THOC3	PF25174	302 - 364	1e-09	THOC3 beta-propeller domain
WD40	PF00400	321 - 360	4e-08	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	545 - 648	1.1e-10	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	546 - 619	6.1e-06	WDR3 first beta-propeller domain
WD40_Prp19	PF24814	546 - 644	1.9e-06	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	546 - 669	9.9e-13	THOC3 beta-propeller domain
BRWD_AD	PF25313	1386 - 1562	1.3e-62	BRWD/PHIP ancillary domain-like domain
Bromodomain	PF00439	1607 - 1661	5.6e-09	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0003731)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49430 AT5G49430
fragaria_vesca	FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490
malus_domestica	MD13G1156100.v1.1 MD16G1157000.v1.1
prunus_persica	Prupe.1G121900_v2.0.a1 Prupe.1G121900_v2.0.a1
pyrus_communis	pycom13g13310 pycom13g13320 pycom13g13330 pycom13g13340 pycom13g13350 pycom16g13190 pycom16g13200
rosa_chinensis	RchiOBHm_Chr4g0424601
rosa_laevigata	RLG00000007452
rosa_multiflora	Rmu_co8472673.1_g000001
rosa_roxburghii	Rroxscaffold_5G00366520
rosa_rugosa	Rorug04G0198100 Rorug04G0198200 Rorug04G0198300
rosa_samantha	Rh4AG254900 Rh4BG260400 Rh4CG271900 Rh4DG255100
rosa_wichuraiana	Rw4G022040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1782
AccB1I	GGYRCC	2 cut(s)	2183, 3881
AccB7I	CCANNNNNTGG	3 cut(s)	554, 3341, 4813
AccI	GTMKAC	2 cut(s)	1257, 4055
AccII	CGCG	1 cut(s)	936
AccIII	TCCGGA	1 cut(s)	3502
AciI	CCGC	8 cut(s)	217, 799, 912, 934, 1379, 1574, 1683, 4008
AcoI	YGGCCR	2 cut(s)	840, 1975
AcsI	RAATTY	8 cut(s)	61, 1388, 1430, 1438, 2419, 2977, 4290, 4819
AcuI	CTGAAG	3 cut(s)	3081, 4440, 4746
AcvI	CACGTG	1 cut(s)	3974
AcyI	GRCGYC	2 cut(s)	1779, 2184
AdeI	CACNNNGTG	2 cut(s)	379, 1634
AflII	CTTAAG	2 cut(s)	2347, 4361
AflIII	ACRYGT	1 cut(s)	1064
AjiI	CACGTC	1 cut(s)	1610
AjuI	GAANNNNNNNTTGG	2 cut(s)	16, 48
AloI	GAACNNNNNNTCC	2 cut(s)	453, 485
Alw21I	GWGCWC	2 cut(s)	512, 2593
Alw26I	GTCTC	7 cut(s)	2764, 3545, 4515, 4640, 4751, 4860, 4943
AlwNI	CAGNNNCTG	4 cut(s)	104, 968, 2813, 4665
Ama87I	CYCGRG	3 cut(s)	271, 1083, 3067
Aor13HI	TCCGGA	1 cut(s)	3502
ApoI	RAATTY	8 cut(s)	61, 1388, 1430, 1438, 2419, 2977, 4290, 4819
ArsI	GACNNNNNNTTYG	2 cut(s)	671, 703
AseI	ATTAAT	1 cut(s)	2039
AspA2I	CCTAGG	2 cut(s)	1118, 2678
AspLEI	GCGC	3 cut(s)	127, 2186, 3700
AspS9I	GGNCC	5 cut(s)	188, 1151, 1604, 1951, 2231
AsuC2I	CCSGG	5 cut(s)	149, 1084, 1085, 1105, 3197
AsuII	TTCGAA	1 cut(s)	890
AvaI	CYCGRG	3 cut(s)	271, 1083, 3067
AvrII	CCTAGG	2 cut(s)	1118, 2678
AxyI	CCTNAGG	2 cut(s)	2188, 4235
BaeGI	GKGCMC	1 cut(s)	646
BalI	TGGCCA	2 cut(s)	842, 1977
BamHI	GGATCC	4 cut(s)	1025, 1500, 1617, 2110
BanI	GGYRCC	2 cut(s)	2183, 3881
BanII	GRGCYC	6 cut(s)	512, 1093, 2593, 2908, 3191, 3502
BarI	GAAGNNNNNNTAC	2 cut(s)	4458, 4490
BauI	CACGAG	3 cut(s)	429, 1476, 1545
BbrPI	CACGTG	1 cut(s)	3974
BbsI	GAAGAC	2 cut(s)	3069, 3231
Bbv12I	GWGCWC	2 cut(s)	512, 2593
BbvCI	CCTCAGC	1 cut(s)	4101
BceAI	ACGGC	3 cut(s)	175, 2189, 3067
BcgI	CGANNNNNNTGC	4 cut(s)	666, 700, 3153, 3187
BciVI	GTATCC	3 cut(s)	817, 3499, 4132
BclI	TGATCA	3 cut(s)	583, 2008, 2476
BcnI	CCSGG	5 cut(s)	149, 1084, 1085, 1105, 3197
BcoDI	GTCTC	7 cut(s)	2764, 3545, 4515, 4640, 4751, 4860, 4943
BfmI	CTRYAG	2 cut(s)	3763, 4284
BfoI	RGCGCY	1 cut(s)	2187
BfrI	CTTAAG	2 cut(s)	2347, 4361
BfuI	GTATCC	3 cut(s)	817, 3499, 4132
BglII	AGATCT	3 cut(s)	1517, 2278, 3687
BlnI	CCTAGG	2 cut(s)	1118, 2678
BlpI	GCTNAGC	1 cut(s)	1170
BmcAI	AGTACT	1 cut(s)	1972
BmeT110I	CYCGRG	3 cut(s)	271, 1083, 3067
BmgBI	CACGTC	1 cut(s)	1610
BmgT120I	GGNCC	5 cut(s)	188, 1151, 1604, 1951, 2231
BmrI	ACTGGG	2 cut(s)	2823, 4838
BmuI	ACTGGG	2 cut(s)	2823, 4838
BoxI	GACNNNNGTC	1 cut(s)	3772
BpiI	GAAGAC	2 cut(s)	3069, 3231
BplI	GAGNNNNNCTC	4 cut(s)	340, 372, 2744, 2776
BpmI	CTGGAG	4 cut(s)	52, 1008, 3020, 4035
Bpu10I	CCTNAGC	2 cut(s)	766, 4101
Bpu1102I	GCTNAGC	1 cut(s)	1170
Bpu14I	TTCGAA	1 cut(s)	890
BpuEI	CTTGAG	3 cut(s)	1544, 2603, 4901
BpuMI	CCSGG	5 cut(s)	149, 1084, 1085, 1105, 3197
Bsa29I	ATCGAT	2 cut(s)	4139, 4371
BsaAI	YACGTR	2 cut(s)	725, 3974
BsaBI	GATNNNNATC	2 cut(s)	2475, 2478
BsaHI	GRCGYC	2 cut(s)	1779, 2184
BsaWI	WCCGGW	3 cut(s)	1915, 3502, 5013
BsaXI	ACNNNNNCTCC	8 cut(s)	453, 483, 2378, 2408, 2617, 2647, 4214, 4244
Bse118I	RCCGGY	1 cut(s)	3426
Bse21I	CCTNAGG	2 cut(s)	2188, 4235
Bse3DI	GCAATG	1 cut(s)	672
Bse8I	GATNNNNATC	2 cut(s)	2475, 2478
BseAI	TCCGGA	1 cut(s)	3502
BseCI	ATCGAT	2 cut(s)	4139, 4371
BseJI	GATNNNNATC	2 cut(s)	2475, 2478
BseMI	GCAATG	1 cut(s)	672
BseRI	GAGGAG	4 cut(s)	289, 2399, 2765, 2962
BseSI	GKGCMC	1 cut(s)	646
BseYI	CCCAGC	2 cut(s)	464, 2528
BsgI	GTGCAG	2 cut(s)	110, 2676
Bsh1236I	CGCG	1 cut(s)	936
Bsh1285I	CGRYCG	1 cut(s)	5014
BshNI	GGYRCC	2 cut(s)	2183, 3881
BshVI	ATCGAT	2 cut(s)	4139, 4371
BsiEI	CGRYCG	1 cut(s)	5014
BsiHKAI	GWGCWC	2 cut(s)	512, 2593
BsiHKCI	CYCGRG	3 cut(s)	271, 1083, 3067
BsiSI	CCGG	8 cut(s)	148, 1084, 1105, 1916, 3197, 3427, 3503, 5014
BslFI	GGGAC	7 cut(s)	999, 1100, 3652, 3856, 3916, 4511, 4647
BsmAI	GTCTC	7 cut(s)	2764, 3545, 4515, 4640, 4751, 4860, 4943
BsmBI	CGTCTC	1 cut(s)	4515
BsmFI	GGGAC	7 cut(s)	999, 1100, 3652, 3856, 3916, 4511, 4647
BsmI	GAATGC	2 cut(s)	1199, 1720
BsoBI	CYCGRG	3 cut(s)	271, 1083, 3067
Bsp119I	TTCGAA	1 cut(s)	890
Bsp1286I	GDGCHC	7 cut(s)	512, 646, 1093, 2593, 2908, 3191, 3502
Bsp13I	TCCGGA	1 cut(s)	3502
Bsp1407I	TGTACA	1 cut(s)	1959
Bsp1720I	GCTNAGC	1 cut(s)	1170
Bsp19I	CCATGG	1 cut(s)	3898
BspACI	CCGC	8 cut(s)	217, 799, 912, 934, 1379, 1574, 1683, 4008
BspDI	ATCGAT	2 cut(s)	4139, 4371
BspEI	TCCGGA	1 cut(s)	3502
BspFNI	CGCG	1 cut(s)	936
BspHI	TCATGA	3 cut(s)	1312, 1453, 2535
BspQI	GCTCTTC	1 cut(s)	2139
BspT104I	TTCGAA	1 cut(s)	890
BspT107I	GGYRCC	2 cut(s)	2183, 3881
BspTI	CTTAAG	2 cut(s)	2347, 4361
BsrDI	GCAATG	1 cut(s)	672
BsrFI	RCCGGY	1 cut(s)	3426
BsrGI	TGTACA	1 cut(s)	1959
BssAI	RCCGGY	1 cut(s)	3426
BssNAI	GTATAC	1 cut(s)	1258
BssNI	GRCGYC	2 cut(s)	1779, 2184
BssSI	CACGAG	3 cut(s)	429, 1476, 1545
BssT1I	CCWWGG	5 cut(s)	1118, 1978, 2678, 3898, 4250
Bst1107I	GTATAC	1 cut(s)	1258
Bst2BI	CACGAG	3 cut(s)	429, 1476, 1545
Bst6I	CTCTTC	4 cut(s)	2139, 2639, 2742, 4143
BstACI	GRCGYC	2 cut(s)	1779, 2184
BstAFI	CTTAAG	2 cut(s)	2347, 4361
BstAPI	GCANNNNNTGC	2 cut(s)	1205, 2699
BstAUI	TGTACA	1 cut(s)	1959
BstBAI	YACGTR	2 cut(s)	725, 3974
BstBI	TTCGAA	1 cut(s)	890
BstC8I	GCNNGC	6 cut(s)	560, 579, 844, 1816, 2223, 2685
BstDSI	CCRYGG	6 cut(s)	976, 1633, 3238, 3898, 4604, 4812
BstEII	GGTNACC	1 cut(s)	3369
BstENI	CCTNNNNNAGG	2 cut(s)	1596, 2069
BstFNI	CGCG	1 cut(s)	936
BstH2I	RGCGCY	1 cut(s)	2187
BstHHI	GCGC	3 cut(s)	127, 2186, 3700
BstMAI	GTCTC	7 cut(s)	2764, 3545, 4515, 4640, 4751, 4860, 4943
BstMCI	CGRYCG	1 cut(s)	5014
BstNSI	RCATGY	5 cut(s)	562, 581, 666, 1068, 1473
BstPAI	GACNNNNGTC	1 cut(s)	3772
BstPI	GGTNACC	1 cut(s)	3369
BstSFI	CTRYAG	2 cut(s)	3763, 4284
BstSLI	GKGCMC	1 cut(s)	646
BstUI	CGCG	1 cut(s)	936
BstV2I	GAAGAC	2 cut(s)	3069, 3231
BstZ17I	GTATAC	1 cut(s)	1258
Bsu15I	ATCGAT	2 cut(s)	4139, 4371
Bsu36I	CCTNAGG	2 cut(s)	2188, 4235
BsuI	GTATCC	3 cut(s)	817, 3499, 4132
BsuTUI	ATCGAT	2 cut(s)	4139, 4371
BtgI	CCRYGG	6 cut(s)	976, 1633, 3238, 3898, 4604, 4812
BtgZI	GCGATG	1 cut(s)	3156
BtrI	CACGTC	1 cut(s)	1610
BtsIMutI	CAGTG	7 cut(s)	209, 486, 783, 1153, 1227, 1372, 3306
Cac8I	GCNNGC	6 cut(s)	560, 579, 844, 1816, 2223, 2685
CaiI	CAGNNNCTG	4 cut(s)	104, 968, 2813, 4665
CciI	TCATGA	3 cut(s)	1312, 1453, 2535
CfoI	GCGC	3 cut(s)	127, 2186, 3700
Cfr10I	RCCGGY	1 cut(s)	3426
Cfr13I	GGNCC	5 cut(s)	188, 1151, 1604, 1951, 2231
Cfr9I	CCCGGG	1 cut(s)	1083
ClaI	ATCGAT	2 cut(s)	4139, 4371
CseI	GACGC	2 cut(s)	2006, 5026
CsiI	ACCWGGT	1 cut(s)	375
CspCI	CAANNNNNGTGG	4 cut(s)	1192, 1227, 3363, 3398
DinI	GGCGCC	1 cut(s)	2185
DraI	TTTAAA	1 cut(s)	2418
DraIII	CACNNNGTG	2 cut(s)	379, 1634
EaeI	YGGCCR	2 cut(s)	840, 1975
Eam1104I	CTCTTC	4 cut(s)	2139, 2639, 2742, 4143
EarI	CTCTTC	4 cut(s)	2139, 2639, 2742, 4143
EciI	GGCGGA	1 cut(s)	1563
Ecl136II	GAGCTC	2 cut(s)	510, 2591
Eco130I	CCWWGG	5 cut(s)	1118, 1978, 2678, 3898, 4250
Eco147I	AGGCCT	3 cut(s)	418, 1123, 3398
Eco24I	GRGCYC	6 cut(s)	512, 1093, 2593, 2908, 3191, 3502
Eco32I	GATATC	6 cut(s)	257, 2239, 2344, 2920, 3353, 3648
Eco53kI	GAGCTC	2 cut(s)	510, 2591
Eco57I	CTGAAG	3 cut(s)	3081, 4440, 4746
Eco72I	CACGTG	1 cut(s)	3974
Eco81I	CCTNAGG	2 cut(s)	2188, 4235
Eco88I	CYCGRG	3 cut(s)	271, 1083, 3067
Eco91I	GGTNACC	1 cut(s)	3369
EcoICRI	GAGCTC	2 cut(s)	510, 2591
EcoNI	CCTNNNNNAGG	2 cut(s)	1596, 2069
EcoO65I	GGTNACC	1 cut(s)	3369
EcoRI	GAATTC	2 cut(s)	1438, 2977
EcoRV	GATATC	6 cut(s)	257, 2239, 2344, 2920, 3353, 3648
EcoT14I	CCWWGG	5 cut(s)	1118, 1978, 2678, 3898, 4250
EcoT22I	ATGCAT	2 cut(s)	579, 3571
EcoT38I	GRGCYC	6 cut(s)	512, 1093, 2593, 2908, 3191, 3502
EgeI	GGCGCC	1 cut(s)	2185
EheI	GGCGCC	1 cut(s)	2185
ErhI	CCWWGG	5 cut(s)	1118, 1978, 2678, 3898, 4250
Esp3I	CGTCTC	1 cut(s)	4515
FalI	AAGNNNNNCTT	8 cut(s)	2555, 2587, 2978, 3010, 3025, 3057, 3779, 3811
FaqI	GGGAC	7 cut(s)	999, 1100, 3652, 3856, 3916, 4511, 4647
FauI	CCCGC	1 cut(s)	1372
FauNDI	CATATG	4 cut(s)	573, 1768, 2053, 2140
FbaI	TGATCA	3 cut(s)	583, 2008, 2476
FblI	GTMKAC	2 cut(s)	1257, 4055
FriOI	GRGCYC	6 cut(s)	512, 1093, 2593, 2908, 3191, 3502
GlaI	GCGC	3 cut(s)	126, 2185, 3699
GsaI	CCCAGC	2 cut(s)	468, 2532
GsuI	CTGGAG	4 cut(s)	52, 1008, 3020, 4035
HaeII	RGCGCY	1 cut(s)	2187
HapII	CCGG	8 cut(s)	148, 1084, 1105, 1916, 3197, 3427, 3503, 5014
HgaI	GACGC	2 cut(s)	2006, 5026
HhaI	GCGC	3 cut(s)	127, 2186, 3700
Hin1I	GRCGYC	2 cut(s)	1779, 2184
Hin6I	GCGC	3 cut(s)	125, 2184, 3698
HinP1I	GCGC	3 cut(s)	125, 2184, 3698
HincII	GTYRAC	3 cut(s)	1642, 3304, 4131
HindII	GTYRAC	3 cut(s)	1642, 3304, 4131
HindIII	AAGCTT	3 cut(s)	2219, 2987, 4398
HpaI	GTTAAC	1 cut(s)	1642
HpaII	CCGG	8 cut(s)	148, 1084, 1105, 1916, 3197, 3427, 3503, 5014
Hpy99I	CGWCG	1 cut(s)	4925
Hsp92I	GRCGYC	2 cut(s)	1779, 2184
HspAI	GCGC	3 cut(s)	125, 2184, 3698
KasI	GGCGCC	1 cut(s)	2183
Kpn2I	TCCGGA	1 cut(s)	3502
Ksp22I	TGATCA	3 cut(s)	583, 2008, 2476
KspAI	GTTAAC	1 cut(s)	1642
LguI	GCTCTTC	1 cut(s)	2139
MabI	ACCWGGT	1 cut(s)	375
MfeI	CAATTG	3 cut(s)	395, 1955, 3705
MhlI	GDGCHC	7 cut(s)	512, 646, 1093, 2593, 2908, 3191, 3502
MlsI	TGGCCA	2 cut(s)	842, 1977
MluNI	TGGCCA	2 cut(s)	842, 1977
Mly113I	GGCGCC	1 cut(s)	2184
MlyI	GAGTC	8 cut(s)	1186, 1666, 2172, 2357, 2447, 2798, 3059, 3221
MmeI	TCCRAC	5 cut(s)	497, 508, 3062, 3909, 4857
Mox20I	TGGCCA	2 cut(s)	842, 1977
Mph1103I	ATGCAT	2 cut(s)	579, 3571
MroI	TCCGGA	1 cut(s)	3502
MscI	TGGCCA	2 cut(s)	842, 1977
MslI	CAYNNNNRTG	8 cut(s)	576, 639, 735, 861, 1341, 3858, 3879, 4710
Msp20I	TGGCCA	2 cut(s)	842, 1977
MspA1I	CMGCKG	2 cut(s)	846, 2690
MspCI	CTTAAG	2 cut(s)	2347, 4361
MspI	CCGG	8 cut(s)	148, 1084, 1105, 1916, 3197, 3427, 3503, 5014
MunI	CAATTG	3 cut(s)	395, 1955, 3705
Mva1269I	GAATGC	2 cut(s)	1199, 1720
MvnI	CGCG	1 cut(s)	936
NarI	GGCGCC	1 cut(s)	2184
NciI	CCSGG	5 cut(s)	149, 1084, 1085, 1105, 3197
NcoI	CCATGG	1 cut(s)	3898
NdeI	CATATG	4 cut(s)	573, 1768, 2053, 2140
NmeAIII	GCCGAG	3 cut(s)	2160, 4669, 4718
NmuCI	GTSAC	8 cut(s)	863, 1178, 1225, 3369, 3726, 3774, 4426, 4634
NsiI	ATGCAT	2 cut(s)	579, 3571
NspI	RCATGY	5 cut(s)	562, 581, 666, 1068, 1473
NspV	TTCGAA	1 cut(s)	890
PaeI	GCATGC	2 cut(s)	562, 581
PaeR7I	CTCGAG	2 cut(s)	271, 3067
PagI	TCATGA	3 cut(s)	1312, 1453, 2535
PasI	CCCWGGG	1 cut(s)	4665
PceI	AGGCCT	3 cut(s)	418, 1123, 3398
PciI	ACATGT	1 cut(s)	1064
PciSI	GCTCTTC	1 cut(s)	2139
PctI	GAATGC	2 cut(s)	1199, 1720
PflMI	CCANNNNNTGG	3 cut(s)	554, 3341, 4813
PfoI	TCCNGGA	1 cut(s)	147
PleI	GAGTC	8 cut(s)	1185, 1665, 2172, 2357, 2446, 2798, 3059, 3221
PluTI	GGCGCC	1 cut(s)	2187
PmaCI	CACGTG	1 cut(s)	3974
PmlI	CACGTG	1 cut(s)	3974
PpsI	GAGTC	8 cut(s)	1185, 1665, 2172, 2357, 2446, 2798, 3059, 3221
Ppu21I	YACGTR	2 cut(s)	725, 3974
PscI	ACATGT	1 cut(s)	1064
PshAI	GACNNNNGTC	1 cut(s)	3772
PshBI	ATTAAT	1 cut(s)	2039
Psp124BI	GAGCTC	2 cut(s)	512, 2593
PspCI	CACGTG	1 cut(s)	3974
PspEI	GGTNACC	1 cut(s)	3369
PspFI	CCCAGC	2 cut(s)	464, 2528
PspPI	GGNCC	5 cut(s)	188, 1151, 1604, 1951, 2231
PspXI	VCTCGAGB	2 cut(s)	271, 3067
PsrI	GAACNNNNNNTAC	2 cut(s)	4877, 4909
PstNI	CAGNNNCTG	4 cut(s)	104, 968, 2813, 4665
PvuII	CAGCTG	2 cut(s)	846, 2690
RseI	CAYNNNNRTG	8 cut(s)	576, 639, 735, 861, 1341, 3858, 3879, 4710
SacI	GAGCTC	2 cut(s)	512, 2593
SapI	GCTCTTC	1 cut(s)	2139
Sau96I	GGNCC	5 cut(s)	188, 1151, 1604, 1951, 2231
ScaI	AGTACT	1 cut(s)	1972
SchI	GAGTC	8 cut(s)	1186, 1666, 2172, 2357, 2447, 2798, 3059, 3221
SduI	GDGCHC	7 cut(s)	512, 646, 1093, 2593, 2908, 3191, 3502
SexAI	ACCWGGT	1 cut(s)	375
SfcI	CTRYAG	2 cut(s)	3763, 4284
SfoI	GGCGCC	1 cut(s)	2185
Sfr274I	CTCGAG	2 cut(s)	271, 3067
SfuI	TTCGAA	1 cut(s)	890
SlaI	CTCGAG	2 cut(s)	271, 3067
SmaI	CCCGGG	1 cut(s)	1085
SmiMI	CAYNNNNRTG	8 cut(s)	576, 639, 735, 861, 1341, 3858, 3879, 4710
SmlI	CTYRAG	7 cut(s)	271, 1559, 2347, 2582, 3067, 4361, 4880
SmoI	CTYRAG	7 cut(s)	271, 1559, 2347, 2582, 3067, 4361, 4880
SphI	GCATGC	2 cut(s)	562, 581
SseBI	AGGCCT	3 cut(s)	418, 1123, 3398
SsiI	CCGC	8 cut(s)	217, 799, 912, 934, 1379, 1574, 1683, 4008
SspDI	GGCGCC	1 cut(s)	2183
SstI	GAGCTC	2 cut(s)	512, 2593
StuI	AGGCCT	3 cut(s)	418, 1123, 3398
StyI	CCWWGG	5 cut(s)	1118, 1978, 2678, 3898, 4250
TatI	WGTACW	5 cut(s)	744, 1959, 1970, 3056, 4626
TauI	GCSGC	2 cut(s)	220, 1685
TscAI	CASTG	7 cut(s)	216, 493, 790, 1153, 1234, 1372, 3313
TseFI	GTSAC	8 cut(s)	863, 1178, 1225, 3369, 3726, 3774, 4426, 4634
Tsp45I	GTSAC	8 cut(s)	863, 1178, 1225, 3369, 3726, 3774, 4426, 4634
TspGWI	ACGGA	6 cut(s)	965, 1528, 3760, 3793, 4573, 4593
TspMI	CCCGGG	1 cut(s)	1083
TspRI	CASTG	7 cut(s)	216, 493, 790, 1153, 1234, 1372, 3313
Van91I	CCANNNNNTGG	3 cut(s)	554, 3341, 4813
Vha464I	CTTAAG	2 cut(s)	2347, 4361
VspI	ATTAAT	1 cut(s)	2039
XagI	CCTNNNNNAGG	2 cut(s)	1596, 2069
XapI	RAATTY	8 cut(s)	61, 1388, 1430, 1438, 2419, 2977, 4290, 4819
XbaI	TCTAGA	3 cut(s)	139, 2281, 2672
XceI	RCATGY	5 cut(s)	562, 581, 666, 1068, 1473
XcmI	CCANNNNNNNNNTGG	1 cut(s)	4784
XhoI	CTCGAG	2 cut(s)	271, 3067
XmaI	CCCGGG	1 cut(s)	1083
XmaJI	CCTAGG	2 cut(s)	1118, 2678
XmiI	GTMKAC	2 cut(s)	1257, 4055
ZraI	GACGTC	1 cut(s)	1780
ZrmI	AGTACT	1 cut(s)	1972
Zsp2I	ATGCAT	2 cut(s)	579, 3571

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.