Bromodomain and WD repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G49430 AT5G49430 |
| fragaria_vesca | FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 |
| malus_domestica | MD13G1156100.v1.1 MD16G1157000.v1.1 |
| prunus_persica | Prupe.1G121900_v2.0.a1 Prupe.1G121900_v2.0.a1 |
| pyrus_communis | pycom13g13310 pycom13g13320 pycom13g13330 pycom13g13340 pycom13g13350 pycom16g13190 pycom16g13200 |
| rosa_chinensis | RchiOBHm_Chr4g0424601 |
| rosa_laevigata | RLG00000007452 |
| rosa_multiflora | Rmu_co8472673.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00366520 |
| rosa_rugosa | Rorug04G0198100 Rorug04G0198200 Rorug04G0198300 |
| rosa_samantha | Rh4AG254900 Rh4BG260400 Rh4CG271900 Rh4DG255100 |
| rosa_wichuraiana | Rw4G022040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 4457 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 4637, 5120 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2313 |
| AccI | GTMKAC | 4 cut(s) | 1884, 3847, 4238, 4808 |
| AccII | CGCG | 5 cut(s) | 566, 1464, 1531, 1620, 3805 |
| AccIII | TCCGGA | 2 cut(s) | 1851, 2236 |
| AciI | CCGC | 5 cut(s) | 1531, 1620, 2083, 5036, 5162 |
| AcoI | YGGCCR | 5 cut(s) | 831, 1318, 1936, 1960, 2617 |
| AcsI | RAATTY | 9 cut(s) | 14, 1078, 1423, 1602, 2557, 2906, 3773, 4481, 5092 |
| AcuI | CTGAAG | 7 cut(s) | 1101, 2209, 2391, 3081, 4632, 5015, 5030 |
| AcyI | GRCGYC | 1 cut(s) | 2188 |
| AdeI | CACNNNGTG | 1 cut(s) | 3107 |
| AflIII | ACRYGT | 1 cut(s) | 333 |
| AgeI | ACCGGT | 1 cut(s) | 1223 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2824, 2856, 3324, 3356 |
| Alw21I | GWGCWC | 1 cut(s) | 637 |
| Alw26I | GTCTC | 7 cut(s) | 98, 849, 1168, 2656, 3610, 4387, 4663 |
| Alw44I | GTGCAC | 1 cut(s) | 633 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 4526 |
| Aor13HI | TCCGGA | 2 cut(s) | 1851, 2236 |
| ApaLI | GTGCAC | 1 cut(s) | 633 |
| ApoI | RAATTY | 9 cut(s) | 14, 1078, 1423, 1602, 2557, 2906, 3773, 4481, 5092 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1640, 1672 |
| AseI | ATTAAT | 1 cut(s) | 3933 |
| AsiGI | ACCGGT | 1 cut(s) | 1223 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1894, 2626 |
| AspLEI | GCGC | 2 cut(s) | 936, 5172 |
| AspS9I | GGNCC | 9 cut(s) | 185, 340, 1145, 1589, 2216, 3096, 3433, 4059, 4120 |
| AsuII | TTCGAA | 1 cut(s) | 4416 |
| AvaII | GGWCC | 5 cut(s) | 185, 340, 1145, 3096, 4059 |
| BaeGI | GKGCMC | 1 cut(s) | 637 |
| BalI | TGGCCA | 4 cut(s) | 833, 1320, 1938, 1962 |
| BamHI | GGATCC | 3 cut(s) | 3088, 3640, 3739 |
| BauI | CACGAG | 3 cut(s) | 24, 1322, 1581 |
| BbsI | GAAGAC | 2 cut(s) | 2451, 4503 |
| Bbv12I | GWGCWC | 1 cut(s) | 637 |
| BbvCI | CCTCAGC | 2 cut(s) | 1572, 2457 |
| BceAI | ACGGC | 3 cut(s) | 292, 658, 825 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1454, 1488 |
| BciVI | GTATCC | 1 cut(s) | 360 |
| BclI | TGATCA | 2 cut(s) | 367, 3493 |
| BcoDI | GTCTC | 7 cut(s) | 98, 849, 1168, 2656, 3610, 4387, 4663 |
| BfmI | CTRYAG | 7 cut(s) | 1057, 1125, 1362, 2724, 3393, 4476, 4665 |
| BfoI | RGCGCY | 1 cut(s) | 937 |
| BfuI | GTATCC | 1 cut(s) | 360 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 946 |
| BglII | AGATCT | 2 cut(s) | 801, 2720 |
| BlpI | GCTNAGC | 2 cut(s) | 590, 2280 |
| BmcAI | AGTACT | 1 cut(s) | 3320 |
| Bme18I | GGWCC | 5 cut(s) | 185, 340, 1145, 3096, 4059 |
| BmgT120I | GGNCC | 9 cut(s) | 185, 340, 1145, 1589, 2216, 3096, 3433, 4059, 4120 |
| BmrI | ACTGGG | 1 cut(s) | 4360 |
| BmuI | ACTGGG | 1 cut(s) | 4360 |
| BoxI | GACNNNNGTC | 1 cut(s) | 4223 |
| BpiI | GAAGAC | 2 cut(s) | 2451, 4503 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 4334, 4366 |
| BpmI | CTGGAG | 8 cut(s) | 453, 999, 1138, 1660, 2406, 3205, 4032, 4523 |
| Bpu10I | CCTNAGC | 5 cut(s) | 117, 713, 757, 1572, 2457 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 590, 2280 |
| Bpu14I | TTCGAA | 1 cut(s) | 4416 |
| BpuEI | CTTGAG | 3 cut(s) | 616, 1068, 3033 |
| Bsa29I | ATCGAT | 1 cut(s) | 88 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1767, 3492 |
| BsaHI | GRCGYC | 1 cut(s) | 2188 |
| BsaI | GGTCTC | 1 cut(s) | 2656 |
| BsaWI | WCCGGW | 4 cut(s) | 1223, 1851, 1900, 2236 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1126, 1156, 3193, 3223 |
| Bse118I | RCCGGY | 2 cut(s) | 1223, 2079 |
| Bse3DI | GCAATG | 5 cut(s) | 663, 1797, 4005, 4693, 5164 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1767, 3492 |
| BseAI | TCCGGA | 2 cut(s) | 1851, 2236 |
| BseCI | ATCGAT | 1 cut(s) | 88 |
| BseJI | GATNNNNATC | 2 cut(s) | 1767, 3492 |
| BseMI | GCAATG | 5 cut(s) | 663, 1797, 4005, 4693, 5164 |
| BseRI | GAGGAG | 8 cut(s) | 624, 895, 1560, 1599, 1605, 2947, 3640, 4904 |
| BseSI | GKGCMC | 1 cut(s) | 637 |
| BseYI | CCCAGC | 1 cut(s) | 2921 |
| BsgI | GTGCAG | 3 cut(s) | 2455, 2664, 4065 |
| Bsh1236I | CGCG | 5 cut(s) | 566, 1464, 1531, 1620, 3805 |
| BshTI | ACCGGT | 1 cut(s) | 1223 |
| BshVI | ATCGAT | 1 cut(s) | 88 |
| BsiHKAI | GWGCWC | 1 cut(s) | 637 |
| BsiSI | CCGG | 6 cut(s) | 1224, 1852, 1901, 2080, 2237, 3752 |
| BslFI | GGGAC | 4 cut(s) | 732, 1921, 2975, 3850 |
| BsmAI | GTCTC | 7 cut(s) | 98, 849, 1168, 2656, 3610, 4387, 4663 |
| BsmFI | GGGAC | 4 cut(s) | 732, 1921, 2975, 3850 |
| BsmI | GAATGC | 3 cut(s) | 1705, 1723, 3485 |
| Bso31I | GGTCTC | 1 cut(s) | 2656 |
| Bsp119I | TTCGAA | 1 cut(s) | 4416 |
| Bsp1286I | GDGCHC | 1 cut(s) | 637 |
| Bsp13I | TCCGGA | 2 cut(s) | 1851, 2236 |
| Bsp1407I | TGTACA | 2 cut(s) | 205, 1342 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 590, 2280 |
| Bsp19I | CCATGG | 4 cut(s) | 2307, 4062, 4170, 4796 |
| Bsp68I | TCGCGA | 2 cut(s) | 1464, 3805 |
| BspACI | CCGC | 5 cut(s) | 1531, 1620, 2083, 5036, 5162 |
| BspDI | ATCGAT | 1 cut(s) | 88 |
| BspEI | TCCGGA | 2 cut(s) | 1851, 2236 |
| BspFNI | CGCG | 5 cut(s) | 566, 1464, 1531, 1620, 3805 |
| BspHI | TCATGA | 6 cut(s) | 1297, 1438, 2029, 2523, 3490, 4105 |
| BspMAI | CTGCAG | 1 cut(s) | 2728 |
| BspQI | GCTCTTC | 1 cut(s) | 12 |
| BspT104I | TTCGAA | 1 cut(s) | 4416 |
| BspTNI | GGTCTC | 1 cut(s) | 2656 |
| BsrDI | GCAATG | 5 cut(s) | 663, 1797, 4005, 4693, 5164 |
| BsrFI | RCCGGY | 2 cut(s) | 1223, 2079 |
| BsrGI | TGTACA | 2 cut(s) | 205, 1342 |
| BssAI | RCCGGY | 2 cut(s) | 1223, 2079 |
| BssNAI | GTATAC | 2 cut(s) | 3848, 4809 |
| BssNI | GRCGYC | 1 cut(s) | 2188 |
| BssSI | CACGAG | 3 cut(s) | 24, 1322, 1581 |
| BssT1I | CCWWGG | 8 cut(s) | 1094, 2307, 3524, 4062, 4123, 4170, 4796, 4856 |
| Bst1107I | GTATAC | 2 cut(s) | 3848, 4809 |
| Bst2BI | CACGAG | 3 cut(s) | 24, 1322, 1581 |
| Bst6I | CTCTTC | 3 cut(s) | 12, 1395, 4666 |
| BstACI | GRCGYC | 1 cut(s) | 2188 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 659, 1199, 1796 |
| BstAUI | TGTACA | 2 cut(s) | 205, 1342 |
| BstBI | TTCGAA | 1 cut(s) | 4416 |
| BstC8I | GCNNGC | 8 cut(s) | 835, 938, 1533, 1801, 1844, 2575, 3535, 3803 |
| BstDSI | CCRYGG | 6 cut(s) | 841, 2307, 4062, 4170, 4445, 4796 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 505, 1581, 3554 |
| BstFNI | CGCG | 5 cut(s) | 566, 1464, 1531, 1620, 3805 |
| BstH2I | RGCGCY | 1 cut(s) | 937 |
| BstHHI | GCGC | 2 cut(s) | 936, 5172 |
| BstMAI | GTCTC | 7 cut(s) | 98, 849, 1168, 2656, 3610, 4387, 4663 |
| BstNSI | RCATGY | 4 cut(s) | 337, 553, 1846, 4686 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 4223 |
| BstSFI | CTRYAG | 7 cut(s) | 1057, 1125, 1362, 2724, 3393, 4476, 4665 |
| BstSLI | GKGCMC | 1 cut(s) | 637 |
| BstUI | CGCG | 5 cut(s) | 566, 1464, 1531, 1620, 3805 |
| BstV2I | GAAGAC | 2 cut(s) | 2451, 4503 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 3268, 3377 |
| BstZ17I | GTATAC | 2 cut(s) | 3848, 4809 |
| Bsu15I | ATCGAT | 1 cut(s) | 88 |
| BsuI | GTATCC | 1 cut(s) | 360 |
| BsuTUI | ATCGAT | 1 cut(s) | 88 |
| BtgI | CCRYGG | 6 cut(s) | 841, 2307, 4062, 4170, 4445, 4796 |
| BtgZI | GCGATG | 1 cut(s) | 1479 |
| BtsI | GCAGTG | 3 cut(s) | 1477, 2443, 3144 |
| BtuMI | TCGCGA | 2 cut(s) | 1464, 3805 |
| Cac8I | GCNNGC | 8 cut(s) | 835, 938, 1533, 1801, 1844, 2575, 3535, 3803 |
| CaiI | CAGNNNCTG | 1 cut(s) | 4526 |
| CciI | TCATGA | 6 cut(s) | 1297, 1438, 2029, 2523, 3490, 4105 |
| CfoI | GCGC | 2 cut(s) | 936, 5172 |
| Cfr10I | RCCGGY | 2 cut(s) | 1223, 2079 |
| Cfr13I | GGNCC | 9 cut(s) | 185, 340, 1145, 1589, 2216, 3096, 3433, 4059, 4120 |
| ClaI | ATCGAT | 1 cut(s) | 88 |
| CseI | GACGC | 3 cut(s) | 1537, 2177, 3230 |
| CsiI | ACCWGGT | 1 cut(s) | 3103 |
| CspAI | ACCGGT | 1 cut(s) | 1223 |
| DraI | TTTAAA | 3 cut(s) | 1420, 3873, 5119 |
| DraIII | CACNNNGTG | 1 cut(s) | 3107 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 4637, 5120 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 4637, 5120 |
| EaeI | YGGCCR | 5 cut(s) | 831, 1318, 1936, 1960, 2617 |
| Eam1104I | CTCTTC | 3 cut(s) | 12, 1395, 4666 |
| EarI | CTCTTC | 3 cut(s) | 12, 1395, 4666 |
| EciI | GGCGGA | 1 cut(s) | 2098 |
| Eco130I | CCWWGG | 8 cut(s) | 1094, 2307, 3524, 4062, 4123, 4170, 4796, 4856 |
| Eco31I | GGTCTC | 1 cut(s) | 2656 |
| Eco32I | GATATC | 1 cut(s) | 254 |
| Eco47I | GGWCC | 5 cut(s) | 185, 340, 1145, 3096, 4059 |
| Eco57I | CTGAAG | 7 cut(s) | 1101, 2209, 2391, 3081, 4632, 5015, 5030 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 505, 1581, 3554 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1589, 3096, 3433 |
| EcoRI | GAATTC | 2 cut(s) | 1078, 1602 |
| EcoRV | GATATC | 1 cut(s) | 254 |
| EcoT14I | CCWWGG | 8 cut(s) | 1094, 2307, 3524, 4062, 4123, 4170, 4796, 4856 |
| EcoT22I | ATGCAT | 3 cut(s) | 171, 1705, 5210 |
| ErhI | CCWWGG | 8 cut(s) | 1094, 2307, 3524, 4062, 4123, 4170, 4796, 4856 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 5099, 5131 |
| FaqI | GGGAC | 4 cut(s) | 732, 1921, 2975, 3850 |
| FauI | CCCGC | 1 cut(s) | 1524 |
| FauNDI | CATATG | 2 cut(s) | 1753, 2125 |
| FbaI | TGATCA | 2 cut(s) | 367, 3493 |
| FblI | GTMKAC | 4 cut(s) | 1884, 3847, 4238, 4808 |
| GlaI | GCGC | 2 cut(s) | 935, 5171 |
| GsaI | CCCAGC | 1 cut(s) | 2925 |
| GsuI | CTGGAG | 8 cut(s) | 453, 999, 1138, 1660, 2406, 3205, 4032, 4523 |
| HaeII | RGCGCY | 1 cut(s) | 937 |
| HapII | CCGG | 6 cut(s) | 1224, 1852, 1901, 2080, 2237, 3752 |
| HgaI | GACGC | 3 cut(s) | 1537, 2177, 3230 |
| HhaI | GCGC | 2 cut(s) | 936, 5172 |
| Hin1I | GRCGYC | 1 cut(s) | 2188 |
| Hin6I | GCGC | 2 cut(s) | 934, 5170 |
| HinP1I | GCGC | 2 cut(s) | 934, 5170 |
| HincII | GTYRAC | 2 cut(s) | 678, 4335 |
| HindII | GTYRAC | 2 cut(s) | 678, 4335 |
| HindIII | AAGCTT | 4 cut(s) | 380, 592, 2625, 2972 |
| HpaII | CCGG | 6 cut(s) | 1224, 1852, 1901, 2080, 2237, 3752 |
| Hpy99I | CGWCG | 1 cut(s) | 3302 |
| HpyCH4IV | ACGT | 1 cut(s) | 2899 |
| HpySE526I | ACGT | 1 cut(s) | 2899 |
| Hsp92I | GRCGYC | 1 cut(s) | 2188 |
| HspAI | GCGC | 2 cut(s) | 934, 5170 |
| Kpn2I | TCCGGA | 2 cut(s) | 1851, 2236 |
| Ksp22I | TGATCA | 2 cut(s) | 367, 3493 |
| LguI | GCTCTTC | 1 cut(s) | 12 |
| MabI | ACCWGGT | 1 cut(s) | 3103 |
| MaeII | ACGT | 1 cut(s) | 2899 |
| MfeI | CAATTG | 2 cut(s) | 392, 1818 |
| MhlI | GDGCHC | 1 cut(s) | 637 |
| MlsI | TGGCCA | 4 cut(s) | 833, 1320, 1938, 1962 |
| MluNI | TGGCCA | 4 cut(s) | 833, 1320, 1938, 1962 |
| MlyI | GAGTC | 9 cut(s) | 1099, 1651, 1979, 2879, 2957, 3872, 4025, 4597, 4865 |
| MmeI | TCCRAC | 4 cut(s) | 906, 1505, 1634, 4207 |
| Mox20I | TGGCCA | 4 cut(s) | 833, 1320, 1938, 1962 |
| Mph1103I | ATGCAT | 3 cut(s) | 171, 1705, 5210 |
| MroI | TCCGGA | 2 cut(s) | 1851, 2236 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1894, 2626 |
| MscI | TGGCCA | 4 cut(s) | 833, 1320, 1938, 1962 |
| MslI | CAYNNNNRTG | 4 cut(s) | 630, 1326, 1980, 3003 |
| Msp20I | TGGCCA | 4 cut(s) | 833, 1320, 1938, 1962 |
| MspA1I | CMGCKG | 4 cut(s) | 182, 455, 837, 1385 |
| MspI | CCGG | 6 cut(s) | 1224, 1852, 1901, 2080, 2237, 3752 |
| MunI | CAATTG | 2 cut(s) | 392, 1818 |
| Mva1269I | GAATGC | 3 cut(s) | 1705, 1723, 3485 |
| MvnI | CGCG | 5 cut(s) | 566, 1464, 1531, 1620, 3805 |
| NcoI | CCATGG | 4 cut(s) | 2307, 4062, 4170, 4796 |
| NdeI | CATATG | 2 cut(s) | 1753, 2125 |
| NmuCI | GTSAC | 5 cut(s) | 1219, 1736, 3351, 4265, 4826 |
| NruI | TCGCGA | 2 cut(s) | 1464, 3805 |
| NsiI | ATGCAT | 3 cut(s) | 171, 1705, 5210 |
| NspI | RCATGY | 4 cut(s) | 337, 553, 1846, 4686 |
| NspV | TTCGAA | 1 cut(s) | 4416 |
| PaeI | GCATGC | 1 cut(s) | 1846 |
| PagI | TCATGA | 6 cut(s) | 1297, 1438, 2029, 2523, 3490, 4105 |
| PciI | ACATGT | 1 cut(s) | 333 |
| PciSI | GCTCTTC | 1 cut(s) | 12 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3306 |
| PctI | GAATGC | 3 cut(s) | 1705, 1723, 3485 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1894, 2626 |
| PflFI | GACNNNGTC | 2 cut(s) | 189, 4057 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2313 |
| PinAI | ACCGGT | 1 cut(s) | 1223 |
| PleI | GAGTC | 9 cut(s) | 1098, 1650, 1978, 2878, 2957, 3871, 4025, 4597, 4865 |
| PpsI | GAGTC | 9 cut(s) | 1098, 1650, 1978, 2878, 2957, 3871, 4025, 4597, 4865 |
| PpuMI | RGGWCCY | 1 cut(s) | 3096 |
| PscI | ACATGT | 1 cut(s) | 333 |
| PshAI | GACNNNNGTC | 1 cut(s) | 4223 |
| PshBI | ATTAAT | 1 cut(s) | 3933 |
| PsiI | TTATAA | 1 cut(s) | 4457 |
| Psp5II | RGGWCCY | 1 cut(s) | 3096 |
| PspFI | CCCAGC | 1 cut(s) | 2921 |
| PspPI | GGNCC | 9 cut(s) | 185, 340, 1145, 1589, 2216, 3096, 3433, 4059, 4120 |
| PspPPI | RGGWCCY | 1 cut(s) | 3096 |
| PstI | CTGCAG | 1 cut(s) | 2728 |
| PstNI | CAGNNNCTG | 1 cut(s) | 4526 |
| PsyI | GACNNNGTC | 2 cut(s) | 189, 4057 |
| PvuII | CAGCTG | 4 cut(s) | 182, 455, 837, 1385 |
| RruI | TCGCGA | 2 cut(s) | 1464, 3805 |
| RseI | CAYNNNNRTG | 4 cut(s) | 630, 1326, 1980, 3003 |
| SapI | GCTCTTC | 1 cut(s) | 12 |
| Sau96I | GGNCC | 9 cut(s) | 185, 340, 1145, 1589, 2216, 3096, 3433, 4059, 4120 |
| ScaI | AGTACT | 1 cut(s) | 3320 |
| SchI | GAGTC | 9 cut(s) | 1099, 1651, 1979, 2879, 2957, 3872, 4025, 4597, 4865 |
| SduI | GDGCHC | 1 cut(s) | 637 |
| SexAI | ACCWGGT | 1 cut(s) | 3103 |
| SfcI | CTRYAG | 7 cut(s) | 1057, 1125, 1362, 2724, 3393, 4476, 4665 |
| SfuI | TTCGAA | 1 cut(s) | 4416 |
| SinI | GGWCC | 5 cut(s) | 185, 340, 1145, 3096, 4059 |
| SmiI | ATTTAAAT | 1 cut(s) | 3873 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 630, 1326, 1980, 3003 |
| SmlI | CTYRAG | 3 cut(s) | 595, 1083, 3048 |
| SmoI | CTYRAG | 3 cut(s) | 595, 1083, 3048 |
| SphI | GCATGC | 1 cut(s) | 1846 |
| SsiI | CCGC | 5 cut(s) | 1531, 1620, 2083, 5036, 5162 |
| SspI | AATATT | 2 cut(s) | 2365, 4592 |
| StyI | CCWWGG | 8 cut(s) | 1094, 2307, 3524, 4062, 4123, 4170, 4796, 4856 |
| SwaI | ATTTAAAT | 1 cut(s) | 3873 |
| TaiI | ACGT | 1 cut(s) | 2902 |
| TaqI | TCGA | 7 cut(s) | 88, 724, 925, 3861, 4416, 4641, 5089 |
| TatI | WGTACW | 7 cut(s) | 205, 404, 1342, 2358, 2995, 3318, 4818 |
| TseFI | GTSAC | 5 cut(s) | 1219, 1736, 3351, 4265, 4826 |
| Tsp45I | GTSAC | 5 cut(s) | 1219, 1736, 3351, 4265, 4826 |
| TspGWI | ACGGA | 4 cut(s) | 635, 878, 1824, 1902 |
| Tth111I | GACNNNGTC | 2 cut(s) | 189, 4057 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2313 |
| VneI | GTGCAC | 1 cut(s) | 633 |
| VpaK11BI | GGWCC | 5 cut(s) | 185, 340, 1145, 3096, 4059 |
| VspI | ATTAAT | 1 cut(s) | 3933 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 505, 1581, 3554 |
| XapI | RAATTY | 9 cut(s) | 14, 1078, 1423, 1602, 2557, 2906, 3773, 4481, 5092 |
| XbaI | TCTAGA | 4 cut(s) | 100, 1370, 2609, 2981 |
| XceI | RCATGY | 4 cut(s) | 337, 553, 1846, 4686 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2003, 4976 |
| XmiI | GTMKAC | 4 cut(s) | 1884, 3847, 4238, 4808 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1894, 2626 |
| ZrmI | AGTACT | 1 cut(s) | 3320 |
| Zsp2I | ATGCAT | 3 cut(s) | 171, 1705, 5210 |