Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0003731

Physical Location & Seq

Genomic Coordinates Reverse (-)

23130731 .. 23144781

Gene Structure 14051 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g19490.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5247 bp

ATGGCTCTTCAAAAGTTTCCTTGTGGCGATGCTCCTTCTGTTAGCATGAAACACTTGAACTTTCTCAGTAAAGTGCATGAAAACACTCTACATGAGGATGTAGAGCCAAATCATGCCAGGGAACAAGATGTGGATGTTGACCTCAGAGAAGTGTATTTCCTCATTATGCATTTTCTTTCAGCTGGACCATGTCGTAAAACTTGTGTACAGTTCTGGAACGAACTTCTTGAACATCAACTTTTACCTAGAAGATATCACGCTTGGTATTCAAGGAAAGGGTTGCATAGTGGGGATGAGAATGATGATGGGCAATCATTCCCCTTGAATTACAATATGTTGGTGCCAAGGTATCCTCACATTGAGCAGGATCACTTGGTAAAGCTTTTGAAGCAAATGATCCTGAGTATAGCCCCACCATCAAGGGGTATGACTGGTGGAAATGCCCCTAATGCAGCTGATGTACCTACTCTCTTGGGAACGGGCACATTTTCACTTCTGAGCTATGATAGGGATCAAGAAAACAACGAAATGAACCGACCTGCTGCTTACATGCGTTGGCCTCACATTAAAGCTAATCAGGTGCATGGGTTAGGTTTGAGGGAAATTGGGGGAGGTTTCACCAGACATCACCGTGCACCGTCTGTTCGTGCTGCATCTTATGCCATTGCAAAACCATCAACCATGTTTCAGAAGATGAAAAATACCAAGAGAATAAGGGGCCATCGAAACGCTGTCTATTGTGCAACATTTGATCGCTCAGGTAGATATGTTATCACTGGTTCAGATGATCGCCTGGTGAAGATCTGGTTAATAGAAACTGCATTTTGTTTGGCCAGCTGCCGTGGACATGAAGGAGACATCACTGATTTAGCTGTGAGTTCCAACAATACTTTGGTGGCATCCGCATCAAATGATTGTATTATACGAGTTTGGCGCTTGCCAGATGGGCTTCCAATTTCAGTGTTGCGGGGACACACTGGAGCTGTGACTGCAATTGCATTTAATCCCAGGCCTGGCTCTACATACCACCTTCTATCTTCCTCTGATGATGGAACTTGTAGGATATGGGATGCCAGGAATTCTCAAGTGACTCCAAGGATATACATTCCAAAACCTTCAGATACTACAACTGGGAGAAACAGTGGTCCATCCTCAAGCACTGTACAGAGCCATCAGATCTTCTGTTGTGCATTTAATGCTAATGGAACAGTCTTTGTTACCGGTAGCTCAGACACTCTTGCGAGGGTGTGGATTGCTTCCAAGCCAGGCTCAGATGAGTCAGACCAACCGAATCATGAGATAGATGTGTTATCTGGCCATGAGAATGATGTCAATTACGTACAATTTAGTGGCTGTGCTGTAGTATCTAGATTTATGGCAGCTGACACCTCAAAGGAAGAGAATGTTCCTAAATTTAAAAATTCGTGGTTCAATCATGACAATATAGTTACTTGCTCTCGCGATGGGAGCGCAATTATCTGGATTCCCAAATCACGAAGATCACATGGAAAATCTGGTCGTTGGACAAGAGCTTATCATCTGAAAGTTCCCCCTCCACCAATGCCTCCTCAACCTTCACGTGGAGGCCCCCGCCAGAGAATTCTTCCAACTCCTCGTGGTGTTAATATGATTATCTGGAGTCTTGACAATCGCTTTGTTCTTGCTGCTATCATGGATTGCAGAATATGCGTATGGAATGCTTCTGATGGTAGCTTAGTGCATTCTTTGACGGGTCACACTGAATCTACATATGTTCTGGATGTTCACCCTTTCAACCCCAGGTTGGCAATGAGTGCTGGCTATGACGGAAAAACAATTGTCTGGGATATATGGGAAGGCATGCCTATCTGTATATATCAAACTTCACAGTTCAGATTGGTTGACGGAAAGTTTTCGCCGGACGGAACGTCGATTATACTATCTGATGATGTTGGGCAACTCTACATATTGGACAGTGGCCAAGGGGAGTCCCACAATGATGCAAAATATGATCAGTTTTTTCTTGGTGATTATCGCCCAATCATTCAAGACAGCTTCGGGAATGTTCTTGACCAGGAAACTCAGATTCCAGCATACCGACGGAATATGCAGGATCTACTTTGTGATTCAGGCATGATACCATATCCGGAACCCTACCAGAGTGCGTACCAGAAGAGACGATTAGGAGCCCTGGGTTCTGAGTGGCGTCCTTCATCGTTAAGACTTGCTGTTGGGCCTGACTTCAGTTTAGATCCAGATTTCCAAATGCTACCTTTGGCAGACTTGGATATGTTATTGACCGAGCCGCTACCAGAGTTTGTAGATGCCATGGATTGGGAACCAGAAAATGAAATGCAAAGTGATGATGCTGATTCAGAGTACAATATCACTGAAGATTATTCTACTGGAGGGGAGCAAGGAAGTTTAAGTTCAAACCCTTCTGTTGATCCAGAGTGCAGTGAAGAAGATAGTGACGAGGATGCTCAACTGGATGGACTACGAAGATCAAGAAGGAAAAAACAAAAGGCTGATATTGAAGTCATGACGTCTTCTGGAAGGTGTATTAAAAGGAGGAACTTGGATGACCGTGATGATCACTCATTCAGAAGTAATAGAAAAAGGAAATCAAGGCATGGCCGAAAATCTTCAAAAAAGAAATGCTCCACATCGAAGTCACTGAGACCTCAAAGAGTTGCTGCACGCAATGCCCTTACACTATTTTCTAAGATAACGGGACGACATACAGACGGGGAAGATGAAGATGGATCGGAAGGAGAAATTTCAGGAAGTGAATCAACGCTGCAAGATTCAAATGTTGAGAGTGATGGATCCGATAGAGAAAATCACCTAAGCAACCATATGAAAGGAAAACAGGTTTTACTCAATGAATCTGAGGACCCGGTCAAATCTCATGAACTTCCTGAACTTCAAAGGAACTCTGGGAACAGGAGGAGATTAGTGCTAAAACTGCCAAGACGGCCGTCAAATACAAATACGATTGTGGATACAGAAAGCACAATACATAAGTGCGAAAATCCGGCTTATCTGGTTGACCAATCTTGCAATCACAAAGCCAGTGAAGCAAATGAGAATCACATGAACTCTCAGGATCTAAGGACCTCTCCTGGTCAGGAAAATTGCAGCATGTTTGAAAGAGCAGTGGGAGGGAAATCATACGAAGTTGAGAATTATTTGGACTTGACTGAGAATTATAAAGTTGGAAGTATAAGATGGGGAGGGTCCAGAGCTCGAACATCAAAGCGGCTGAGAGTGGGAGAAGCCACATCACTGGATGCACTTGCCAGTACCAGTCTAGCTGTTGTTGGTCACGGTGGAAACACAGAATCTGAAAAGGATGGTCGAAACTTGTCCCCTCAATTAGAAAGCCCAAGGAATGGGGATATGATGGATGGAGTGGTTATGACAAATGAGAGAACTATTGGGACTAGTACCTCTGAGGACCTTAATGGTAAAGCTGAGGTTAATGAGAACTCGGGTTTTAGTGAATGCAAGGATCATGACCAATCACCTAAGTCTGTTCACATGGCTCATTGGGATGCAAGCACTTCCTCTGACCTCAACAAGGATGGGAGTGTTTTCTCTTCTGAACAAAATGAGAAGCTTACACCAGCCTCAACGAAATTAAGGTTGCGGAAGATTCCGAGGGGCCCTGAATGTCCTAGTGAACAGGTTATGAGCTCTGTAGTAGAGAATTTGGAAAGAGGTAGATGTAACACATTGCCTGAAAGCCTTCCAACAATAGATCACGATTCAATTGTGCCAGAGGATAATGGCTCCAAAAAATTTAACTCAGATCAAAGATGCAGCGGCTCACGAGAATCAGACATTCAAATTGAATCAGTCGAGTCCCATGTAAATAGAAACAAAATGTTTAGTGCTGTTTATAGGCGGGTGAAATCACATAGGGGTCGGAGTAATTTGGAAGGTGAAAGTAGTGGGAAGGGAGAAGGCACTTCACAAATTTCCAACACTAGCGACCAAAATGTCATTGCTGCAGTAGACTGCCGTGACGATTCAATTGATGGAGCTCGTAGGACACGGTCAATGGGGTTGAAGGCATCTACACGTGATCCAAGTAGTGTGGATCAAGATCACAAGTTAAGTCAAGGCCATGAGCCTAGGTATACATTCAGAAGTGCCCAGAACAACACGGTGCACAAATGTCAACTTCCGAATGAAGAACGGGGATCAAGTTCAAGGACAGCAGTTGGGTTGAGATCAACTAGAAACAGAAGGAGTTATTATGATCATGATGTGGATCCAATAGATAACAGGAAGTCACATCAATCAATGAGGAAAGGAACATGGTTGATGCTGTCGGCACATGAGGAGAGCTCACGATATATTCCCCAGTTAGGGGATGAAGTTGTCTATTTGAGACAGGGGCATCAGGAGTATTTTGATCTTGGTAGGTTGAGAGAAGACCCGCCTTGGGCATTTATAAAGCAGAGAATAAGAGCTGTGGAGTTTTGTATAGTTCAAGACCTAGAATATTCTTTACTTCCAGGATCTGGGGATAGCTGCTGTAAATTGACCCTTGAATTTGTAGATCCTTCATCTGATGTGTACTGCAAGTCTTTCAGAATGACTCTGCCTGAAGTTACTGGTTTCCCTGATTACATTGTTGAAAAAACTCGCTATGTTGCTGCAATAGAGAAAAAATGGTCATGTAGGGATAAGTGCAAAGTCTGGTGGAAAAATGATGGTGACGACGATGGTAGTTGGTGGGATGGTCGGGTTGTGCAAATTCAGCCCAAATCTCCTGAGTTTCCTGACAGTCCATGGGAAATGTGTATGGTTATGTACAAGTCTGTTCCTAAAGAGACACAGCTACATAGTCCTTGGGAGCTTTTTGATACCGCTACTGAATGGGTGCAGCCCCAGATTGATGATAAGAGCAAAAACAAGCTGCATTCCGCCTTTGCCCAACTAGTGAAATCATCCCACAGTCGTCAGGATTCGTTAGGGATTAATAAATTGAAGCAGCTTCAGGAGAAGCCGAAGTTCAGAAATTGGTGTGCGGTTCCAATATCTCTTGACTTGATAGAGAGTAGGTTAGAAAACGACTATTACCGAAGTTTGGAAGCACTGAAACATGACTTTAAGGTAATGCTGTTAAATGCGCAAGCCTATGTAGAAAGCCATGCGGAGTCTTCAGGGAAAATGAAACGGACAGCAGATAAAGAATTTCTAGAGAAACTGCATTGTCTATCTGGCTGGTTTACAGAGACAATTTCGTCCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005829 GO:0006325 GO:0006355 GO:0006357 GO:0006996 GO:0007010 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008360 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019221 GO:0019222 GO:0022603 GO:0022604 GO:0023052 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0034097 GO:0038111 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071310 GO:0071345 GO:0071840 GO:0080090 GO:0098760 GO:0098761 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_resp Bromodomain WD40

Protein Analysis

1749

Amino Acids

196.68

Weight (kDa)

6.26

Isoelectric Point (pI)

49.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR5	PF25175	19 - 135	2e-10	WDR5 beta-propeller domain
WD40_Prp19	PF24814	20 - 132	3.2e-07	Prp19 WD40 domain
Beta-prop_WDR3_1st	PF25173	20 - 116	5.9e-07	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	21 - 144	5.7e-13	THOC3 beta-propeller domain
BRWD_AD	PF25313	926 - 1100	9.6e-54	BRWD/PHIP ancillary domain-like domain
Bromodomain	PF00439	1143 - 1195	1e-07	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0003731)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49430 AT5G49430
fragaria_vesca	FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490 FvH4_4g19490
malus_domestica	MD13G1156100.v1.1 MD16G1157000.v1.1
prunus_persica	Prupe.1G121900_v2.0.a1 Prupe.1G121900_v2.0.a1
pyrus_communis	pycom13g13310 pycom13g13320 pycom13g13330 pycom13g13340 pycom13g13350 pycom16g13190 pycom16g13200
rosa_chinensis	RchiOBHm_Chr4g0424601
rosa_laevigata	RLG00000007452
rosa_multiflora	Rmu_co8472673.1_g000001
rosa_roxburghii	Rroxscaffold_5G00366520
rosa_rugosa	Rorug04G0198100 Rorug04G0198200 Rorug04G0198300
rosa_samantha	Rh4AG254900 Rh4BG260400 Rh4CG271900 Rh4DG255100
rosa_wichuraiana	Rw4G022040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	3192, 4442
AasI	GACNNNNNNGTC	2 cut(s)	3983, 5236
AatII	GACGTC	1 cut(s)	2528
Acc16I	TGCGCA	1 cut(s)	5124
Acc36I	ACCTGC	1 cut(s)	547
AccB1I	GGYRCC	1 cut(s)	340
AccB7I	CCANNNNNTGG	3 cut(s)	2313, 3374, 4511
AccI	GTMKAC	2 cut(s)	3999, 4124
AccII	CGCG	1 cut(s)	1461
AccIII	TCCGGA	1 cut(s)	2125
AcoI	YGGCCR	5 cut(s)	831, 1315, 1957, 2614, 2957
AcuI	CTGAAG	6 cut(s)	1101, 2206, 2391, 4617, 4973, 5139
AcvI	CACGTG	2 cut(s)	1580, 4067
AcyI	GRCGYC	2 cut(s)	2185, 2525
AflIII	ACRYGT	1 cut(s)	4064
AgeI	ACCGGT	1 cut(s)	1220
AhdI	GACNNNNNGTC	1 cut(s)	1906
AhlI	ACTAGT	2 cut(s)	3425, 4930
Alw21I	GWGCWC	6 cut(s)	637, 3229, 3680, 4030, 4158, 4337
Alw26I	GTCTC	6 cut(s)	849, 2149, 2653, 4372, 4817, 5222
Alw44I	GTGCAC	2 cut(s)	633, 4154
AlwNI	CAGNNNCTG	2 cut(s)	3326, 4511
Ama87I	CYCGRG	1 cut(s)	3472
Aor13HI	TCCGGA	1 cut(s)	2125
ApaI	GGGCCC	1 cut(s)	3650
ApaLI	GTGCAC	2 cut(s)	633, 4154
ArsI	GACNNNNNNTTYG	2 cut(s)	1637, 1669
AseI	ATTAAT	1 cut(s)	4971
AsiGI	ACCGGT	1 cut(s)	1220
Asp700I	GAANNNNTTC	3 cut(s)	1891, 2623, 3729
AspA2I	CCTAGG	1 cut(s)	4118
AspLEI	GCGC	3 cut(s)	936, 1472, 5125
AsuC2I	CCSGG	1 cut(s)	2879
AvaI	CYCGRG	1 cut(s)	3472
AvaII	GGWCC	6 cut(s)	185, 1145, 2875, 3096, 3219, 3439
AvrII	CCTAGG	1 cut(s)	4118
BaeGI	GKGCMC	5 cut(s)	485, 637, 3650, 4141, 4158
BalI	TGGCCA	3 cut(s)	833, 1317, 1959
BamHI	GGATCC	2 cut(s)	2807, 4258
BanI	GGYRCC	1 cut(s)	340
BanII	GRGCYC	6 cut(s)	2170, 3229, 3650, 3680, 4030, 4337
BauI	CACGAG	2 cut(s)	1614, 3813
BbrPI	CACGTG	2 cut(s)	1580, 4067
BbsI	GAAGAC	3 cut(s)	2520, 4428, 5145
Bbv12I	GWGCWC	6 cut(s)	637, 3229, 3680, 4030, 4158, 4337
BbvCI	CCTCAGC	1 cut(s)	3456
BceAI	ACGGC	4 cut(s)	825, 2944, 2972, 3990
BciVI	GTATCC	2 cut(s)	360, 2977
BclI	TGATCA	3 cut(s)	1990, 2572, 4246
BcnI	CCSGG	1 cut(s)	2879
BcoDI	GTCTC	6 cut(s)	849, 2149, 2653, 4372, 4817, 5222
BcuI	ACTAGT	2 cut(s)	3425, 4930
BfmI	CTRYAG	3 cut(s)	1359, 3681, 3993
BfoI	RGCGCY	1 cut(s)	937
BfuAI	ACCTGC	1 cut(s)	547
BfuI	GTATCC	2 cut(s)	360, 2977
BglI	GCCNNNNNGGC	2 cut(s)	946, 2956
BglII	AGATCT	2 cut(s)	801, 1176
BlnI	CCTAGG	1 cut(s)	4118
Bme18I	GGWCC	6 cut(s)	185, 1145, 2875, 3096, 3219, 3439
BmeRI	GACNNNNNGTC	1 cut(s)	1906
BmeT110I	CYCGRG	1 cut(s)	3472
BmrI	ACTGGG	2 cut(s)	1140, 4345
BmuI	ACTGGG	2 cut(s)	1140, 4345
BoxI	GACNNNNGTC	1 cut(s)	2959
BpiI	GAAGAC	3 cut(s)	2520, 4428, 5145
BplI	GAGNNNNNCTC	2 cut(s)	4319, 4351
BpmI	CTGGAG	3 cut(s)	999, 1657, 2406
Bpu10I	CCTNAGC	3 cut(s)	757, 2828, 3456
BpuEI	CTTGAG	2 cut(s)	1068, 1138
BpuMI	CCSGG	1 cut(s)	2879
BsaAI	YACGTR	3 cut(s)	1339, 1580, 4067
BsaBI	GATNNNNATC	3 cut(s)	510, 4089, 4257
BsaHI	GRCGYC	2 cut(s)	2185, 2525
BsaI	GGTCTC	1 cut(s)	2653
BsaWI	WCCGGW	2 cut(s)	1220, 2125
BsaXI	ACNNNNNCTCC	2 cut(s)	1126, 1156
Bse118I	RCCGGY	1 cut(s)	1220
Bse3DI	GCAATG	5 cut(s)	663, 1794, 2689, 3716, 3987
Bse8I	GATNNNNATC	3 cut(s)	510, 4089, 4257
BseAI	TCCGGA	1 cut(s)	2125
BseJI	GATNNNNATC	3 cut(s)	510, 4089, 4257
BseMI	GCAATG	5 cut(s)	663, 1794, 2689, 3716, 3987
BseRI	GAGGAG	4 cut(s)	1557, 1602, 2944, 4343
BseSI	GKGCMC	5 cut(s)	485, 637, 3650, 4141, 4158
BseX3I	CGGCCG	1 cut(s)	2957
BsgI	GTGCAG	3 cut(s)	2455, 2661, 4895
Bsh1236I	CGCG	1 cut(s)	1461
Bsh1285I	CGRYCG	1 cut(s)	2960
BshNI	GGYRCC	1 cut(s)	340
BshTI	ACCGGT	1 cut(s)	1220
BsiEI	CGRYCG	1 cut(s)	2960
BsiHKAI	GWGCWC	6 cut(s)	637, 3229, 3680, 4030, 4158, 4337
BsiHKCI	CYCGRG	1 cut(s)	3472
BsiSI	CCGG	5 cut(s)	1221, 1898, 2126, 2879, 3017
BslFI	GGGAC	6 cut(s)	984, 1954, 2727, 3334, 3436, 3832
BsmAI	GTCTC	6 cut(s)	849, 2149, 2653, 4372, 4817, 5222
BsmBI	CGTCTC	1 cut(s)	2149
BsmFI	GGGAC	6 cut(s)	984, 1954, 2727, 3334, 3436, 3832
BsmI	GAATGC	4 cut(s)	1702, 1720, 3491, 4912
Bso31I	GGTCTC	1 cut(s)	2653
BsoBI	CYCGRG	1 cut(s)	3472
Bsp120I	GGGCCC	1 cut(s)	3646
Bsp13I	TCCGGA	1 cut(s)	2125
Bsp1407I	TGTACA	3 cut(s)	205, 1162, 4803
Bsp19I	CCATGG	2 cut(s)	2307, 4781
Bsp68I	TCGCGA	1 cut(s)	1461
BspEI	TCCGGA	1 cut(s)	2125
BspFNI	CGCG	1 cut(s)	1461
BspHI	TCATGA	6 cut(s)	1294, 1435, 2520, 2890, 3496, 4249
BspMAI	CTGCAG	1 cut(s)	3997
BspMI	ACCTGC	1 cut(s)	547
BspQI	GCTCTTC	1 cut(s)	12
BspT107I	GGYRCC	1 cut(s)	340
BspTNI	GGTCTC	1 cut(s)	2653
BsrDI	GCAATG	5 cut(s)	663, 1794, 2689, 3716, 3987
BsrFI	RCCGGY	1 cut(s)	1220
BsrGI	TGTACA	3 cut(s)	205, 1162, 4803
BssAI	RCCGGY	1 cut(s)	1220
BssNAI	GTATAC	1 cut(s)	4125
BssNI	GRCGYC	2 cut(s)	2185, 2525
BssSI	CACGAG	2 cut(s)	1614, 3813
BssT1I	CCWWGG	9 cut(s)	344, 1094, 1960, 2307, 3368, 4118, 4430, 4781, 4841
Bst1107I	GTATAC	1 cut(s)	4125
Bst2BI	CACGAG	2 cut(s)	1614, 3813
Bst6I	CTCTTC	4 cut(s)	12, 1392, 2147, 3586
BstACI	GRCGYC	2 cut(s)	2185, 2525
BstAPI	GCANNNNNTGC	5 cut(s)	659, 1196, 1686, 1793, 2684
BstAUI	TGTACA	3 cut(s)	205, 1162, 4803
BstBAI	YACGTR	3 cut(s)	1339, 1580, 4067
BstC8I	GCNNGC	7 cut(s)	835, 938, 1798, 1841, 2680, 3541, 5127
BstDSI	CCRYGG	3 cut(s)	841, 2307, 4781
BstENI	CCTNNNNNAGG	1 cut(s)	3560
BstFNI	CGCG	1 cut(s)	1461
BstH2I	RGCGCY	1 cut(s)	937
BstHHI	GCGC	3 cut(s)	936, 1472, 5125
BstMAI	GTCTC	6 cut(s)	849, 2149, 2653, 4372, 4817, 5222
BstMCI	CGRYCG	1 cut(s)	2960
BstNSI	RCATGY	3 cut(s)	553, 1843, 3127
BstPAI	GACNNNNGTC	1 cut(s)	2959
BstSFI	CTRYAG	3 cut(s)	1359, 3681, 3993
BstSLI	GKGCMC	5 cut(s)	485, 637, 3650, 4141, 4158
BstSNI	TACGTA	1 cut(s)	1339
BstUI	CGCG	1 cut(s)	1461
BstV2I	GAAGAC	3 cut(s)	2520, 4428, 5145
BstX2I	RGATCY	9 cut(s)	801, 1176, 2092, 2230, 2807, 3088, 4258, 4508, 4549
BstXI	CCANNNNNNTGG	1 cut(s)	3268
BstYI	RGATCY	9 cut(s)	801, 1176, 2092, 2230, 2807, 3088, 4258, 4508, 4549
BstZ17I	GTATAC	1 cut(s)	4125
BstZI	CGGCCG	1 cut(s)	2957
BsuI	GTATCC	2 cut(s)	360, 2977
BtgI	CCRYGG	3 cut(s)	841, 2307, 4781
BtgZI	GCGATG	2 cut(s)	42, 1476
BtsI	GCAGTG	2 cut(s)	2443, 3144
BtuMI	TCGCGA	1 cut(s)	1461
BveI	ACCTGC	1 cut(s)	547
Cac8I	GCNNGC	7 cut(s)	835, 938, 1798, 1841, 2680, 3541, 5127
CaiI	CAGNNNCTG	2 cut(s)	3326, 4511
CciI	TCATGA	6 cut(s)	1294, 1435, 2520, 2890, 3496, 4249
CfoI	GCGC	3 cut(s)	936, 1472, 5125
Cfr10I	RCCGGY	1 cut(s)	1220
CseI	GACGC	1 cut(s)	2174
CspAI	ACCGGT	1 cut(s)	1220
CspCI	CAANNNNNGTGG	2 cut(s)	4062, 4097
DraI	TTTAAA	1 cut(s)	1417
DrdI	GACNNNNNNGTC	2 cut(s)	3983, 5236
DriI	GACNNNNNGTC	1 cut(s)	1906
DseDI	GACNNNNNNGTC	2 cut(s)	3983, 5236
EaeI	YGGCCR	5 cut(s)	831, 1315, 1957, 2614, 2957
EagI	CGGCCG	1 cut(s)	2957
Eam1104I	CTCTTC	4 cut(s)	12, 1392, 2147, 3586
Eam1105I	GACNNNNNGTC	1 cut(s)	1906
EarI	CTCTTC	4 cut(s)	12, 1392, 2147, 3586
EciI	GGCGGA	1 cut(s)	4906
Ecl136II	GAGCTC	4 cut(s)	3227, 3678, 4028, 4335
EclXI	CGGCCG	1 cut(s)	2957
Eco105I	TACGTA	1 cut(s)	1339
Eco130I	CCWWGG	9 cut(s)	344, 1094, 1960, 2307, 3368, 4118, 4430, 4781, 4841
Eco147I	AGGCCT	1 cut(s)	1012
Eco24I	GRGCYC	6 cut(s)	2170, 3229, 3650, 3680, 4030, 4337
Eco31I	GGTCTC	1 cut(s)	2653
Eco32I	GATATC	1 cut(s)	254
Eco47I	GGWCC	6 cut(s)	185, 1145, 2875, 3096, 3219, 3439
Eco52I	CGGCCG	1 cut(s)	2957
Eco53kI	GAGCTC	4 cut(s)	3227, 3678, 4028, 4335
Eco57I	CTGAAG	6 cut(s)	1101, 2206, 2391, 4617, 4973, 5139
Eco72I	CACGTG	2 cut(s)	1580, 4067
Eco88I	CYCGRG	1 cut(s)	3472
EcoICRI	GAGCTC	4 cut(s)	3227, 3678, 4028, 4335
EcoNI	CCTNNNNNAGG	1 cut(s)	3560
EcoO109I	RGGNCCY	6 cut(s)	1586, 2875, 3096, 3439, 3646, 3647
EcoRI	GAATTC	2 cut(s)	1078, 1599
EcoRV	GATATC	1 cut(s)	254
EcoT14I	CCWWGG	9 cut(s)	344, 1094, 1960, 2307, 3368, 4118, 4430, 4781, 4841
EcoT22I	ATGCAT	1 cut(s)	171
EcoT38I	GRGCYC	6 cut(s)	2170, 3229, 3650, 3680, 4030, 4337
ErhI	CCWWGG	9 cut(s)	344, 1094, 1960, 2307, 3368, 4118, 4430, 4781, 4841
Esp3I	CGTCTC	1 cut(s)	2149
FaqI	GGGAC	6 cut(s)	984, 1954, 2727, 3334, 3436, 3832
FauI	CCCGC	4 cut(s)	960, 1598, 3882, 4434
FauNDI	CATATG	2 cut(s)	1750, 2838
FbaI	TGATCA	3 cut(s)	1990, 2572, 4246
FblI	GTMKAC	2 cut(s)	3999, 4124
FriOI	GRGCYC	6 cut(s)	2170, 3229, 3650, 3680, 4030, 4337
FspI	TGCGCA	1 cut(s)	5124
GlaI	GCGC	3 cut(s)	935, 1471, 5124
GsuI	CTGGAG	3 cut(s)	999, 1657, 2406
HaeII	RGCGCY	1 cut(s)	937
HapII	CCGG	5 cut(s)	1221, 1898, 2126, 2879, 3017
HgaI	GACGC	1 cut(s)	2174
HhaI	GCGC	3 cut(s)	936, 1472, 5125
Hin1I	GRCGYC	2 cut(s)	2185, 2525
Hin6I	GCGC	3 cut(s)	934, 1470, 5123
HinP1I	GCGC	3 cut(s)	934, 1470, 5123
HincII	GTYRAC	4 cut(s)	139, 1882, 3031, 4166
HindII	GTYRAC	4 cut(s)	139, 1882, 3031, 4166
HindIII	AAGCTT	2 cut(s)	380, 3599
HpaII	CCGG	5 cut(s)	1221, 1898, 2126, 2879, 3017
Hpy99I	CGWCG	3 cut(s)	1912, 2082, 4715
HpyCH4IV	ACGT	5 cut(s)	1338, 1579, 1907, 2525, 4066
HpySE526I	ACGT	5 cut(s)	1338, 1579, 1907, 2525, 4066
Hsp92I	GRCGYC	2 cut(s)	2185, 2525
HspAI	GCGC	3 cut(s)	934, 1470, 5123
Kpn2I	TCCGGA	1 cut(s)	2125
Ksp22I	TGATCA	3 cut(s)	1990, 2572, 4246
LguI	GCTCTTC	1 cut(s)	12
LmnI	GCTCC	9 cut(s)	37, 980, 1467, 2165, 2392, 2645, 3779, 4025, 4846
MaeII	ACGT	5 cut(s)	1338, 1579, 1907, 2525, 4066
MfeI	CAATTG	4 cut(s)	993, 1815, 3753, 4017
MflI	RGATCY	9 cut(s)	801, 1176, 2092, 2230, 2807, 3088, 4258, 4508, 4549
MlsI	TGGCCA	3 cut(s)	833, 1317, 1959
MluNI	TGGCCA	3 cut(s)	833, 1317, 1959
MlyI	GAGTC	7 cut(s)	1084, 1286, 1648, 1976, 3854, 4582, 5159
MmeI	TCCRAC	7 cut(s)	906, 1502, 1631, 3178, 3758, 3890, 3990
Mox20I	TGGCCA	3 cut(s)	833, 1317, 1959
Mph1103I	ATGCAT	1 cut(s)	171
MroI	TCCGGA	1 cut(s)	2125
MroXI	GAANNNNTTC	3 cut(s)	1891, 2623, 3729
MscI	TGGCCA	3 cut(s)	833, 1317, 1959
MslI	CAYNNNNRTG	5 cut(s)	96, 630, 1323, 1977, 3534
Msp20I	TGGCCA	3 cut(s)	833, 1317, 1959
MspA1I	CMGCKG	5 cut(s)	182, 455, 837, 1382, 3807
MspI	CCGG	5 cut(s)	1221, 1898, 2126, 2879, 3017
MunI	CAATTG	4 cut(s)	993, 1815, 3753, 4017
Mva1269I	GAATGC	4 cut(s)	1702, 1720, 3491, 4912
MvnI	CGCG	1 cut(s)	1461
NciI	CCSGG	1 cut(s)	2879
NcoI	CCATGG	2 cut(s)	2307, 4781
NdeI	CATATG	2 cut(s)	1750, 2838
NmuCI	GTSAC	9 cut(s)	985, 1087, 1733, 2450, 2652, 3305, 4007, 4278, 4706
NruI	TCGCGA	1 cut(s)	1461
NsbI	TGCGCA	1 cut(s)	5124
NsiI	ATGCAT	1 cut(s)	171
NspI	RCATGY	3 cut(s)	553, 1843, 3127
PaeI	GCATGC	1 cut(s)	1843
PagI	TCATGA	6 cut(s)	1294, 1435, 2520, 2890, 3496, 4249
PasI	CCCWGGG	1 cut(s)	2170
PceI	AGGCCT	1 cut(s)	1012
PciSI	GCTCTTC	1 cut(s)	12
PctI	GAATGC	4 cut(s)	1702, 1720, 3491, 4912
PdmI	GAANNNNTTC	3 cut(s)	1891, 2623, 3729
PflFI	GACNNNGTC	3 cut(s)	189, 2879, 4039
PflMI	CCANNNNNTGG	3 cut(s)	2313, 3374, 4511
PfoI	TCCNGGA	1 cut(s)	4504
PinAI	ACCGGT	1 cut(s)	1220
PleI	GAGTC	7 cut(s)	1084, 1285, 1647, 1975, 3853, 4582, 5158
PmaCI	CACGTG	2 cut(s)	1580, 4067
PmlI	CACGTG	2 cut(s)	1580, 4067
PpsI	GAGTC	7 cut(s)	1084, 1285, 1647, 1975, 3853, 4582, 5158
Ppu21I	YACGTR	3 cut(s)	1339, 1580, 4067
PpuMI	RGGWCCY	3 cut(s)	2875, 3096, 3439
PshAI	GACNNNNGTC	1 cut(s)	2959
PshBI	ATTAAT	1 cut(s)	4971
PsiI	TTATAA	2 cut(s)	3192, 4442
Psp124BI	GAGCTC	4 cut(s)	3229, 3680, 4030, 4337
Psp5II	RGGWCCY	3 cut(s)	2875, 3096, 3439
PspCI	CACGTG	2 cut(s)	1580, 4067
PspOMI	GGGCCC	1 cut(s)	3646
PspPPI	RGGWCCY	3 cut(s)	2875, 3096, 3439
PstI	CTGCAG	1 cut(s)	3997
PstNI	CAGNNNCTG	2 cut(s)	3326, 4511
PsuI	RGATCY	9 cut(s)	801, 1176, 2092, 2230, 2807, 3088, 4258, 4508, 4549
PsyI	GACNNNGTC	3 cut(s)	189, 2879, 4039
PvuII	CAGCTG	4 cut(s)	182, 455, 837, 1382
RruI	TCGCGA	1 cut(s)	1461
RseI	CAYNNNNRTG	5 cut(s)	96, 630, 1323, 1977, 3534
SacI	GAGCTC	4 cut(s)	3229, 3680, 4030, 4337
SapI	GCTCTTC	1 cut(s)	12
SchI	GAGTC	7 cut(s)	1084, 1286, 1648, 1976, 3854, 4582, 5159
SfcI	CTRYAG	3 cut(s)	1359, 3681, 3993
SinI	GGWCC	6 cut(s)	185, 1145, 2875, 3096, 3219, 3439
SmiMI	CAYNNNNRTG	5 cut(s)	96, 630, 1323, 1977, 3534
SmlI	CTYRAG	2 cut(s)	1083, 1153
SmoI	CTYRAG	2 cut(s)	1083, 1153
SnaBI	TACGTA	1 cut(s)	1339
SpeI	ACTAGT	2 cut(s)	3425, 4930
SphI	GCATGC	1 cut(s)	1843
SseBI	AGGCCT	1 cut(s)	1012
SspI	AATATT	1 cut(s)	4493
SstI	GAGCTC	4 cut(s)	3229, 3680, 4030, 4337
StuI	AGGCCT	1 cut(s)	1012
StyI	CCWWGG	9 cut(s)	344, 1094, 1960, 2307, 3368, 4118, 4430, 4781, 4841
TaiI	ACGT	5 cut(s)	1341, 1582, 1910, 2528, 4069
TaqI	TCGA	6 cut(s)	724, 1910, 2648, 3229, 3340, 3843
TaqII	GACCGA	1 cut(s)	2294
TatI	WGTACW	5 cut(s)	205, 1162, 2358, 4566, 4803
TauI	GCSGC	3 cut(s)	2287, 3244, 3810
TseFI	GTSAC	9 cut(s)	985, 1087, 1733, 2450, 2652, 3305, 4007, 4278, 4706
Tsp45I	GTSAC	9 cut(s)	985, 1087, 1733, 2450, 2652, 3305, 4007, 4278, 4706
TspGWI	ACGGA	5 cut(s)	1821, 1899, 1917, 2095, 5185
Tth111I	GACNNNGTC	3 cut(s)	189, 2879, 4039
Van91I	CCANNNNNTGG	3 cut(s)	2313, 3374, 4511
VneI	GTGCAC	2 cut(s)	633, 4154
VpaK11BI	GGWCC	6 cut(s)	185, 1145, 2875, 3096, 3219, 3439
VspI	ATTAAT	1 cut(s)	4971
XagI	CCTNNNNNAGG	1 cut(s)	3560
XbaI	TCTAGA	2 cut(s)	1367, 5191
XceI	RCATGY	3 cut(s)	553, 1843, 3127
XcmI	CCANNNNNNNNNTGG	1 cut(s)	889
XmaJI	CCTAGG	1 cut(s)	4118
XmiI	GTMKAC	2 cut(s)	3999, 4124
XmnI	GAANNNNTTC	3 cut(s)	1891, 2623, 3729
ZraI	GACGTC	1 cut(s)	2526
Zsp2I	ATGCAT	1 cut(s)	171

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.