AT5G55910

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
22639813 .. 22642414
2602 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G55910.1

Sequence Viewer

Length: 1497 bp
ATGATGGCTTCAAAAACTCCAGAAGGATCACTTACCAATTCCAGTCAAAGTATGTCAATCAACACTTTAGCAGATCAAGTATCTTCGAGTTTGTCTTTCGCTGATCCAAGTAGTGATGGCAAAACCGGTAATAGTAAGATCAACGAGCAAGGTGAGAGTGGAAAGAGTAGCACTTGTAGACCAAGTACAAGCAGTGATATAAGCGATGAGAGCACTTGTAGCAGCTTTAGTAGCAGTATCAACAAACCTCACAAGGCTAATGATGTGAGATGGGAAGCTATTCAAGCTGTTAGAACTAAACATGGTGGTTTGGGTTTGAATCATTTTAGGCTCTTGAAGAGGTTAGGATGTGGAGATATTGGAACTGTTCATCTTGCTGAGTTGAATGGAACTAGGTGTTATTTTGCGATGAAGGTTATGGATAAAACTGCTTTGGCTAGCCGGAAAAAGCTTCTTAGGGCTCAAACTGAAAGAGAGATATTGCAGTGTCTTGATCACCCGTTTCTTCCGACTTTGTATAGTCATTTTGAGACAGAGAAGTTCTCTTGTTTGGTGATGGAGTTTTGTCCTGGTGGTGATTTGCATACACTAAGGCAGAGACAACCCGGGAAACGCTTCACCGAGCAAGCAGCTAAGTTTTATGTCGCGGAAGTGCTTCTTGCAATGGAATATTTACACATGCTTGGGATCATTTACCGTGATCTGAAACCCGAGAACGTTCTTGTGAGAGATGATGGGCACGTGATGCTTTCGGATTTTGATCTCTCCCTGAGATGTACTGTGAGCCTCTCTATAGTCAGATCAGCTAATGTTGGATCCGAAGGCTTGTCGAAGAATTCGGTTTCTTGCTCGCAACAACCTGCATGCATCCAGCAACCATCTTGCATCTCAATGGCTCCAACATCTTGCTTCGGTCCTCGGTTCTTCTCATCGAAATCCAAGAAAGACAAGAAACCGAAAACCGAAAACGGGAACCACCAAGTAACTCCGTTACCAGAACTCGTTGCAGAGCCCACAGGCGCCCGTTCTATGTCTTTTGTTGGCACACACGAGTACTTAGCTCCAGAGATCATCAAAGGTGAAGGACATGGAAGTGCAGTTGATTGGTGGACCTTTGGGATCTTTCTTTATGAACTATTGTTTGGTAAAACACCGTTTAAAGGGTCAGGAAATCGAGCAACGCTCTTCAACGTGGTTGGTCAGCCTCTTAGATTCCCTGAATCTCCGGTTGTTAGCTTCGCAGCTAGGGATTTGATAAGGAGTTTGCTTGTGAAGGAGCCACAACATAGATTAGCTTATAAGCGTGGAGCAACAGAGATAAAGCAACATCCTTTCTTTGAAGGAGTGAATTGGGCTCTGGTTCGATGTGCCAGTCCACCGGAGATTCCTAAACCGGTTGATCTTGAAGCTTTGAATCCTACTCCTACTGTGCCAGCAGCCGCATCTTCGAGTGTAAGATCTGATCAGAGTAATTATCTTGAGTTTGATTTCTTCTGA

Protein Analysis

498

Amino Acids

54.82

Weight (kDa)

8.47

Isoelectric Point (pI)

46.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 110 - 260 6.5e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 110 - 258 3.8e-20 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 343 - 446 1.1e-20 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 351 - 434 2e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1299
Acc36I ACCTGC 1 cut(s) 868
AccB1I GGYRCC 1 cut(s) 1019
AccI GTMKAC 1 cut(s) 178
AccII CGCG 1 cut(s) 647
AciI CCGC 2 cut(s) 647, 1440
AclI AACGTT 1 cut(s) 717
AclWI GGATC 6 cut(s) 34, 98, 695, 810, 823, 1127
AcsI RAATTY 1 cut(s) 835
AcvI CACGTG 1 cut(s) 742
AcyI GRCGYC 1 cut(s) 1020
AfaI GTAC 3 cut(s) 187, 778, 1055
AfiI CCNNNNNNNGG 2 cut(s) 969, 1160
AgeI ACCGGT 2 cut(s) 125, 1393
AgsI TTSAA 9 cut(s) 12, 284, 319, 337, 385, 1189, 1340, 1406, 1414
AjnI CCWGG 1 cut(s) 568
AjuI GAANNNNNNNTTGG 2 cut(s) 1125, 1157
Alw21I GWGCWC 1 cut(s) 215
Alw26I GTCTC 2 cut(s) 524, 592
AlwI GGATC 6 cut(s) 34, 98, 695, 810, 823, 1127
Ama87I CYCGRG 2 cut(s) 605, 710
ApeKI GCWGC 4 cut(s) 222, 629, 1241, 1436
ApoI RAATTY 1 cut(s) 835
AsiGI ACCGGT 2 cut(s) 125, 1393
Asp700I GAANNNNTTC 3 cut(s) 279, 614, 654
AspLEI GCGC 1 cut(s) 1022
AspS9I GGNCC 2 cut(s) 914, 1110
AsuC2I CCSGG 2 cut(s) 606, 607
AsuHPI GGTGA 6 cut(s) 164, 488, 565, 587, 610, 1091
AsuNHI GCTAGC 1 cut(s) 437
AvaI CYCGRG 2 cut(s) 605, 710
AvaII GGWCC 2 cut(s) 914, 1110
BaeGI GKGCMC 1 cut(s) 741
BamHI GGATCC 1 cut(s) 815
BanI GGYRCC 1 cut(s) 1019
BanII GRGCYC 3 cut(s) 463, 1014, 1357
BauI CACGAG 1 cut(s) 1049
BbrPI CACGTG 1 cut(s) 742
Bbv12I GWGCWC 1 cut(s) 215
BbvI GCAGC 4 cut(s) 234, 641, 1253, 1448
BccI CCATC 5 cut(s) 110, 264, 550, 728, 886
BciT130I CCWGG 1 cut(s) 570
BclI TGATCA 2 cut(s) 493, 1462
BcnI CCSGG 2 cut(s) 606, 607
BcoDI GTCTC 2 cut(s) 524, 592
BfaI CTAG 3 cut(s) 393, 438, 1245
BfmI CTRYAG 1 cut(s) 792
BfoI RGCGCY 1 cut(s) 1023
BfuAI ACCTGC 1 cut(s) 868
BglII AGATCT 1 cut(s) 1457
BisI GCNGC 5 cut(s) 223, 630, 1242, 1437, 1440
BlsI GCNGC 5 cut(s) 224, 631, 1243, 1438, 1441
BmcAI AGTACT 1 cut(s) 1055
Bme1390I CCNGG 3 cut(s) 570, 606, 607
Bme18I GGWCC 2 cut(s) 914, 1110
BmeT110I CYCGRG 2 cut(s) 605, 710
BmgT120I GGNCC 2 cut(s) 914, 1110
BmiI GGNNCC 5 cut(s) 817, 897, 974, 1021, 1278
BmrFI CCNGG 3 cut(s) 570, 606, 607
BmsI GCATC 4 cut(s) 735, 876, 894, 1451
BmtI GCTAGC 1 cut(s) 441
BplI GAGNNNNNCTC 4 cut(s) 527, 559, 1167, 1199
BpmI CTGGAG 1 cut(s) 1047
BpuMI CCSGG 2 cut(s) 606, 607
BsaAI YACGTR 1 cut(s) 742
BsaBI GATNNNNATC 1 cut(s) 759
BsaHI GRCGYC 1 cut(s) 1020
BsaJI CCNNGG 2 cut(s) 605, 917
BsaWI WCCGGW 4 cut(s) 125, 1225, 1378, 1393
Bsc4I CCNNNNNNNGG 2 cut(s) 969, 1160
Bse118I RCCGGY 2 cut(s) 125, 1393
Bse1I ACTGG 2 cut(s) 42, 1371
Bse3DI GCAATG 1 cut(s) 669
Bse8I GATNNNNATC 1 cut(s) 759
BseBI CCWGG 1 cut(s) 570
BseDI CCNNGG 2 cut(s) 605, 917
BseGI GGATG 3 cut(s) 353, 867, 1327
BseJI GATNNNNATC 1 cut(s) 759
BseLI CCNNNNNNNGG 2 cut(s) 969, 1160
BseMI GCAATG 1 cut(s) 669
BseMII CTCAG 2 cut(s) 369, 761
BseNI ACTGG 2 cut(s) 42, 1371
BseSI GKGCMC 1 cut(s) 741
BseXI GCAGC 4 cut(s) 234, 641, 1253, 1448
BsgI GTGCAG 1 cut(s) 1116
Bsh1236I CGCG 1 cut(s) 647
BshNI GGYRCC 1 cut(s) 1019
BshTI ACCGGT 2 cut(s) 125, 1393
BsiHKAI GWGCWC 1 cut(s) 215
BsiHKCI CYCGRG 2 cut(s) 605, 710
BsiSI CCGG 6 cut(s) 126, 442, 606, 1226, 1379, 1394
BslI CCNNNNNNNGG 2 cut(s) 969, 1160
BsmAI GTCTC 2 cut(s) 524, 592
BsoBI CYCGRG 2 cut(s) 605, 710
Bsp1286I GDGCHC 5 cut(s) 215, 463, 741, 1014, 1357
BspACI CCGC 2 cut(s) 647, 1440
BspCNI CTCAG 2 cut(s) 370, 762
BspFNI CGCG 1 cut(s) 647
BspLI GGNNCC 5 cut(s) 817, 897, 974, 1021, 1278
BspMI ACCTGC 1 cut(s) 868
BspOI GCTAGC 1 cut(s) 441
BspPI GGATC 6 cut(s) 34, 98, 695, 810, 823, 1127
BspQI GCTCTTC 1 cut(s) 1190
BspT107I GGYRCC 1 cut(s) 1019
BsrDI GCAATG 1 cut(s) 669
BsrFI RCCGGY 2 cut(s) 125, 1393
BsrI ACTGG 2 cut(s) 42, 1371
BssAI RCCGGY 2 cut(s) 125, 1393
BssECI CCNNGG 2 cut(s) 605, 917
BssNI GRCGYC 1 cut(s) 1020
BssSI CACGAG 1 cut(s) 1049
Bst2BI CACGAG 1 cut(s) 1049
Bst2UI CCWGG 1 cut(s) 570
Bst4CI ACNGT 5 cut(s) 367, 698, 781, 1155, 1429
Bst6I CTCTTC 2 cut(s) 332, 1190
BstACI GRCGYC 1 cut(s) 1020
BstAPI GCANNNNNTGC 1 cut(s) 745
BstBAI YACGTR 1 cut(s) 742
BstC8I GCNNGC 5 cut(s) 439, 627, 851, 865, 1434
BstDEI CTNAG 7 cut(s) 378, 455, 590, 633, 770, 1057, 1208
BstF5I GGATG 3 cut(s) 353, 867, 1327
BstFNI CGCG 1 cut(s) 647
BstH2I RGCGCY 1 cut(s) 1023
BstHHI GCGC 1 cut(s) 1022
BstMAI GTCTC 2 cut(s) 524, 592
BstMWI GCNNNNNNNGC 5 cut(s) 210, 219, 231, 284, 745
BstNI CCWGG 1 cut(s) 570
BstNSI RCATGY 2 cut(s) 682, 867
BstSCI CCNGG 3 cut(s) 568, 604, 605
BstSFI CTRYAG 1 cut(s) 792
BstSLI GKGCMC 1 cut(s) 741
BstUI CGCG 1 cut(s) 647
BstV1I GCAGC 4 cut(s) 234, 641, 1253, 1448
BstX2I RGATCY 3 cut(s) 815, 1119, 1457
BstYI RGATCY 3 cut(s) 815, 1119, 1457
BtgZI GCGATG 2 cut(s) 219, 422
BtsCI GGATG 3 cut(s) 353, 867, 1327
BtsI GCAGTG 2 cut(s) 199, 491
BtsIMutI CAGTG 2 cut(s) 199, 491
BveI ACCTGC 1 cut(s) 868
Cac8I GCNNGC 5 cut(s) 439, 627, 851, 865, 1434
CfoI GCGC 1 cut(s) 1022
Cfr10I RCCGGY 2 cut(s) 125, 1393
Cfr13I GGNCC 2 cut(s) 914, 1110
Cfr9I CCCGGG 1 cut(s) 605
Csp6I GTAC 3 cut(s) 186, 777, 1054
CspAI ACCGGT 2 cut(s) 125, 1393
CviAII CATG 4 cut(s) 302, 679, 864, 1088
CviQI GTAC 3 cut(s) 186, 777, 1054
DdeI CTNAG 7 cut(s) 378, 455, 590, 633, 770, 1057, 1208
DinI GGCGCC 1 cut(s) 1021
DraI TTTAAA 1 cut(s) 1159
Eam1104I CTCTTC 2 cut(s) 332, 1190
EarI CTCTTC 2 cut(s) 332, 1190
Eco24I GRGCYC 3 cut(s) 463, 1014, 1357
Eco47I GGWCC 2 cut(s) 914, 1110
Eco72I CACGTG 1 cut(s) 742
Eco88I CYCGRG 2 cut(s) 605, 710
EcoRI GAATTC 1 cut(s) 835
EcoRII CCWGG 1 cut(s) 568
EcoT22I ATGCAT 1 cut(s) 869
EcoT38I GRGCYC 3 cut(s) 463, 1014, 1357
EgeI GGCGCC 1 cut(s) 1021
EheI GGCGCC 1 cut(s) 1021
FaeI CATG 4 cut(s) 305, 682, 867, 1091
FalI AAGNNNNNCTT 4 cut(s) 15, 47, 642, 674
FatI CATG 4 cut(s) 301, 678, 863, 1087
FbaI TGATCA 2 cut(s) 493, 1462
FblI GTMKAC 1 cut(s) 178
Fnu4HI GCNGC 5 cut(s) 223, 630, 1242, 1437, 1440
FokI GGATG 3 cut(s) 360, 854, 1314
FriOI GRGCYC 3 cut(s) 463, 1014, 1357
Fsp4HI GCNGC 5 cut(s) 223, 630, 1242, 1437, 1440
FspBI CTAG 3 cut(s) 393, 438, 1245
GlaI GCGC 1 cut(s) 1021
GluI GCNGC 5 cut(s) 223, 630, 1242, 1437, 1440
GsuI CTGGAG 1 cut(s) 1047
HaeII RGCGCY 1 cut(s) 1023
HapII CCGG 6 cut(s) 126, 442, 606, 1226, 1379, 1394
HhaI GCGC 1 cut(s) 1022
Hin1I GRCGYC 1 cut(s) 1020
Hin1II CATG 4 cut(s) 305, 682, 867, 1091
Hin6I GCGC 1 cut(s) 1020
HinP1I GCGC 1 cut(s) 1020
HindIII AAGCTT 2 cut(s) 449, 1407
HinfI GANTC 5 cut(s) 319, 1212, 1220, 1384, 1414
HpaII CCGG 6 cut(s) 126, 442, 606, 1226, 1379, 1394
HphI GGTGA 6 cut(s) 164, 488, 565, 587, 610, 1091
Hpy166II GTNNAC 3 cut(s) 179, 1110, 1376
Hpy188I TCNGA 8 cut(s) 510, 705, 754, 800, 820, 1462, 1467, 1496
Hpy188III TCNNGA 7 cut(s) 20, 334, 491, 1064, 1167, 1403, 1478
Hpy8I GTNNAC 3 cut(s) 179, 1110, 1376
HpyAV CCTTC 6 cut(s) 17, 406, 815, 1076, 1267, 1334
HpyCH4III ACNGT 5 cut(s) 367, 698, 781, 1155, 1429
HpyCH4IV ACGT 3 cut(s) 717, 741, 1191
HpyCH4V TGCA 8 cut(s) 484, 583, 662, 863, 867, 885, 1007, 1097
HpyF10VI GCNNNNNNNGC 5 cut(s) 210, 219, 231, 284, 745
HpyF3I CTNAG 7 cut(s) 378, 455, 590, 633, 770, 1057, 1208
HpySE526I ACGT 3 cut(s) 717, 741, 1191
Hsp92I GRCGYC 1 cut(s) 1020
Hsp92II CATG 4 cut(s) 305, 682, 867, 1091
HspAI GCGC 1 cut(s) 1020
KasI GGCGCC 1 cut(s) 1019
Ksp22I TGATCA 2 cut(s) 493, 1462
LguI GCTCTTC 1 cut(s) 1190
LmnI GCTCC 4 cut(s) 901, 1066, 1276, 1307
Lsp1109I GCAGC 4 cut(s) 234, 641, 1253, 1448
LweI GCATC 4 cut(s) 735, 876, 894, 1451
MaeI CTAG 3 cut(s) 393, 438, 1245
MaeII ACGT 3 cut(s) 717, 741, 1191
MaeIII GTNAC 2 cut(s) 982, 990
MboII GAAGA 8 cut(s) 75, 349, 497, 844, 916, 1177, 1437, 1483
MflI RGATCY 3 cut(s) 815, 1119, 1457
MhlI GDGCHC 5 cut(s) 215, 463, 741, 1014, 1357
MluCI AATT 4 cut(s) 37, 835, 1348, 1471
Mly113I GGCGCC 1 cut(s) 1020
MmeI TCCRAC 3 cut(s) 533, 793, 923
MnlI CCTC 5 cut(s) 258, 333, 797, 927, 1215
Mph1103I ATGCAT 1 cut(s) 869
MroXI GAANNNNTTC 3 cut(s) 279, 614, 654
MseI TTAA 1 cut(s) 1158
MslI CAYNNNNRTG 2 cut(s) 890, 1092
MspI CCGG 6 cut(s) 126, 442, 606, 1226, 1379, 1394
MspR9I CCNGG 3 cut(s) 570, 606, 607
MvaI CCWGG 1 cut(s) 570
MvnI CGCG 1 cut(s) 647
MwoI GCNNNNNNNGC 5 cut(s) 210, 219, 231, 284, 745
NarI GGCGCC 1 cut(s) 1020
NciI CCSGG 2 cut(s) 606, 607
NheI GCTAGC 1 cut(s) 437
NlaIII CATG 4 cut(s) 305, 682, 867, 1091
NlaIV GGNNCC 5 cut(s) 817, 897, 974, 1021, 1278
NsiI ATGCAT 1 cut(s) 869
NspI RCATGY 2 cut(s) 682, 867
PaeI GCATGC 1 cut(s) 867
PciSI GCTCTTC 1 cut(s) 1190
PdmI GAANNNNTTC 3 cut(s) 279, 614, 654
PfeI GAWTC 5 cut(s) 319, 1212, 1220, 1384, 1414
PinAI ACCGGT 2 cut(s) 125, 1393
PkrI GCNGC 5 cut(s) 224, 631, 1243, 1438, 1441
PluTI GGCGCC 1 cut(s) 1023
PmaCI CACGTG 1 cut(s) 742
PmlI CACGTG 1 cut(s) 742
Ppu21I YACGTR 1 cut(s) 742
PsiI TTATAA 1 cut(s) 1299
Psp1406I AACGTT 1 cut(s) 717
Psp6I CCWGG 1 cut(s) 568
PspCI CACGTG 1 cut(s) 742
PspGI CCWGG 1 cut(s) 568
PspN4I GGNNCC 5 cut(s) 817, 897, 974, 1021, 1278
PspPI GGNCC 2 cut(s) 914, 1110
PsuI RGATCY 3 cut(s) 815, 1119, 1457
RsaI GTAC 3 cut(s) 187, 778, 1055
RsaNI GTAC 3 cut(s) 186, 777, 1054
RseI CAYNNNNRTG 2 cut(s) 890, 1092
SapI GCTCTTC 1 cut(s) 1190
SaqAI TTAA 1 cut(s) 1158
SatI GCNGC 5 cut(s) 223, 630, 1242, 1437, 1440
Sau96I GGNCC 2 cut(s) 914, 1110
ScaI AGTACT 1 cut(s) 1055
ScrFI CCNGG 3 cut(s) 570, 606, 607
SduI GDGCHC 5 cut(s) 215, 463, 741, 1014, 1357
SfaNI GCATC 4 cut(s) 735, 876, 894, 1451
SfcI CTRYAG 1 cut(s) 792
SfoI GGCGCC 1 cut(s) 1021
SinI GGWCC 2 cut(s) 914, 1110
SmaI CCCGGG 1 cut(s) 607
SmiMI CAYNNNNRTG 2 cut(s) 890, 1092
SmlI CTYRAG 1 cut(s) 1478
SmoI CTYRAG 1 cut(s) 1478
SphI GCATGC 1 cut(s) 867
Sse9I AATT 4 cut(s) 37, 835, 1348, 1471
SsiI CCGC 2 cut(s) 647, 1440
SspDI GGCGCC 1 cut(s) 1019
SspI AATATT 1 cut(s) 671
SspMI CTAG 3 cut(s) 393, 438, 1245
StyD4I CCNGG 3 cut(s) 568, 604, 605
TaaI ACNGT 5 cut(s) 367, 698, 781, 1155, 1429
TaiI ACGT 3 cut(s) 720, 744, 1194
TaqI TCGA 6 cut(s) 86, 830, 932, 1174, 1363, 1448
TaqII GACCGA 1 cut(s) 902
TasI AATT 4 cut(s) 37, 835, 1348, 1471
TatI WGTACW 3 cut(s) 185, 776, 1053
TauI GCSGC 1 cut(s) 1442
TfiI GAWTC 5 cut(s) 319, 1212, 1220, 1384, 1414
Tru1I TTAA 1 cut(s) 1158
Tru9I TTAA 1 cut(s) 1158
TscAI CASTG 2 cut(s) 199, 491
TseI GCWGC 4 cut(s) 222, 629, 1241, 1436
TspDTI ATGAA 3 cut(s) 359, 425, 1146
TspGWI ACGGA 1 cut(s) 978
TspMI CCCGGG 1 cut(s) 605
TspRI CASTG 2 cut(s) 199, 491
VpaK11BI GGWCC 2 cut(s) 914, 1110
XapI RAATTY 1 cut(s) 835
XceI RCATGY 2 cut(s) 682, 867
XmaI CCCGGG 1 cut(s) 605
XmiI GTMKAC 1 cut(s) 178
XmnI GAANNNNTTC 3 cut(s) 279, 614, 654
XspI CTAG 3 cut(s) 393, 438, 1245
ZrmI AGTACT 1 cut(s) 1055
Zsp2I ATGCAT 1 cut(s) 869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.