Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001306

Physical Location & Seq

Genomic Coordinates Reverse (-)

96387647 .. 96391331

Gene Structure 3685 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00075780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1833 bp

ATGGCCACAAAATCTGGTGCCACAGCTTCCTCGAAACCGAAACCAGCTGGCGCTCAAACGGTAGAATCAGATGACCTCAGCCGATTGCCTACACACAATATCAAGCTAACCAAATCGGAGCTGGCGGCTCCTGAGCAATTGCTGAAATCTGTACAAAATTCATCAAAGCATGTTGCAGTAGCAGCTTCTGATAATAAAAGGCCAGAAAATTCCAATCAAACAGGATCTACTGATTTGTTCATTACTAAATTGAATTCGATTTCATTGTCACCCAACCTTGAGAATGCATCAAAGGAAGTGGATTCAGCTGTAACTCAGACTAGAGGCTCAGCGGAAAGTTATGTTGATCAAGAAAAGAAGATATCAGAATATCAAAGTGTCAAGGACAGCTCAGTTTCGGCCAAAGTTAGCGATGGAACCAGCAGTATTGCCAAGACAAGTGGAAGTGCCAAGAATTTTGTTGAAAATAGCAAGAGCAGCATGTGTAGAGGAAGCACAAGTAGTGATGTCAGTGATGAGAGCACTTGTAGCAGCTTTAGTACCAGCATCAGCAAGCCACACAAAGCAAATGACTTGAGATGGGAAGCTATCCAAGCTGTCCGAGCAAGAGATGGGGTTCTGGGTTTAGGTCATTTCAGATTGCTAAAGAGGTTGGGCTGTGGGGATATTGGGAGTGTCTATCTGTCGGAGTTGAGCGGAACCAAATGTTATTTTGCAATGAAGGTTATGGACAAAGGGTCTCTAGCAAGTCGTAAAAAGCTTCTTCGTGCTCAGACAGAGAGAGAGATACTACAGTCTCTGGATCATCCCTTCCTTCCAACATTATACACCCACTTTGAGACAGATAAATTTTCATGCTTGGTAATGGAGTTCTGTCCTGGAGGAGACTTGCACACTCTTCGGCAGAGGCAGCCAGGAAAGCATTTTTCTGAGCAGGCAGTAAAATTCTATGTTGCAGAGGTCCTGTTATCTCTGGAATACCTCCACATGCTTGGGATTGTCTATCGTGACCTTAAGCCAGAAAATGTCCTGGTGAGGGAAGATGGACATATAATGCTCTCTGATTTTGACCTCTCACTCCGTTGTGCTTTTAGTCCAACTCTTGTCAAGACCTCTTCAATGGAGTTTGAACCCTTGCGTAAAAACCCTGTTTATTGTGTTCAACCAGCTTGCATTGAGCCGCCTTCCTGCATCCAACCATCCTGTGTAGCTCCTACAACGTGCTTCTCACCGCGTCTATTTTCTAGCAAGTCCAAAAAGGATAAAAAACCTAAAAACGAAACTGGTAACCAAGTAAGACCATTACCTGAGCTCATGGCAGAACCAACTGATGCCCGGTCTATGTCATTTGTTGGGACTCATGAGTATTTGGCACCTGAGATTATTAAGGGTGAAGGTCATGGAAGTGCTGTTGATTGGTGGACTTTTGGAATCTTTCTGTATGAGCTGTTGTTTGGTAAGACTCCTTTCAAGGGTTCTGGGAATCGAGCAACATTGTTCAATGTTGTGGGTCAGCCCTTGCGGTTTCCAGAATCACCAGTTGTGAGTTTTGCCGCGAGAGACCTCATCAGGGGATTGCTTGTCAAGGAACCGCAGAACAGATTGGCATACAAACGAGGGGCAACTGAGATAAAGCAACACCCCTTTTTTGAAGGAGTGAATTGGGCATTGATACGTTGTGCAACCCCGCCTGAGATCCCAAAACCTGTTGAGATTGAGCAGATTCCTGTCCCGACAATGTCATCGAGTGAGAAGGAGAAGGCGCCTACCATAATGAAAGCAGCTCCTGATCAAAAGGGTTCCGATAATTACCTAGAATTTGATTTCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

610

Amino Acids

67.2

Weight (kDa)

8.51

Isoelectric Point (pI)

43.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	213 - 362	8.2e-36	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	213 - 362	3.9e-19	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	447 - 550	1.6e-20	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	454 - 537	6.3e-06	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26610 AT5G47750 AT5G55910 AT5G55910
fragaria_vesca	FvH4_3g00260 FvH4_3g42710 FvH4_3g42710 FvH4_3g42710 FvH4_3g42710 FvH4_3g42710 FvH4_3g42710
malus_domestica	MD03G1029500.v1.1 MD09G1025300.v1.1 MD10G1339900.v1.1 MD11G1032900.v1.1
prunus_persica	Prupe.4G002900_v2.0.a1 Prupe.4G002900_v2.0.a1 Prupe.6G025600_v2.0.a1 Prupe.6G025600_v2.0.a1 Prupe.6G025600_v2.0.a1 Prupe.6G025600_v2.0.a1 Prupe.6G025600_v2.0.a1
pyrus_communis	pycom03g02440 pycom10g28980 pycom11g02860
rosa_chinensis	RchiOBHm_Chr5g0000381 RchiOBHm_Chr5g0076451
rosa_laevigata	RLG00000030861 RLG00000030862 RLG00000036620
rosa_multiflora	Rmu_co8411395.1_g000001 Rmu_sc0000369.1_g000018 Rmu_sc0001680.1_g000004 Rmu_ssc0000181.1_g000002 Rmu_ssc0000385.1_g000014
rosa_roxburghii	Rroxscaffold_1G00075770 Rroxscaffold_1G00075780
rosa_rugosa	Rorug04G0383300 Rorug04G0383300 Rorug05G0447900 Rorug05G0448000 Rorug05G0448100
rosa_samantha	Rh5AG003200 Rh5AG502800 Rh5BG004200 Rh5BG524500 Rh5CG003400 Rh5CG548100 Rh5DG003100 Rh5DG003200 Rh5DG536300 Rh7BG161800
rosa_wichuraiana	Rw5G000310 Rw5G046640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	17, 1372, 1762
AccBSI	CCGCTC	1 cut(s)	696
AccII	CGCG	2 cut(s)	1234, 1556
AciI	CCGC	9 cut(s)	125, 332, 696, 1181, 1232, 1522, 1554, 1592, 1688
AclWI	GGATC	3 cut(s)	232, 810, 1690
AcoI	YGGCCR	2 cut(s)	3, 399
AcsI	RAATTY	7 cut(s)	157, 208, 253, 454, 848, 944, 1817
AcyI	GRCGYC	1 cut(s)	1763
AfaI	GTAC	2 cut(s)	153, 541
AfiI	CCNNNNNNNGG	3 cut(s)	1036, 1472, 1570
AflII	CTTAAG	1 cut(s)	1013
AgsI	TTSAA	8 cut(s)	253, 464, 1119, 1130, 1163, 1471, 1501, 1652
AhdI	GACNNNNNGTC	1 cut(s)	736
AjnI	CCWGG	3 cut(s)	877, 913, 1029
Alw21I	GWGCWC	3 cut(s)	524, 772, 1314
Alw26I	GTCTC	5 cut(s)	744, 801, 833, 879, 1554
AlwI	GGATC	3 cut(s)	232, 810, 1690
AlwNI	CAGNNNCTG	3 cut(s)	188, 799, 1787
AoxI	GGCC	3 cut(s)	3, 200, 399
ApeKI	GCWGC	5 cut(s)	182, 477, 531, 910, 1781
ApoI	RAATTY	7 cut(s)	157, 208, 253, 454, 848, 944, 1817
AspLEI	GCGC	2 cut(s)	53, 1765
AspS9I	GGNCC	1 cut(s)	961
AsuC2I	CCSGG	1 cut(s)	1336
AsuHPI	GGTGA	5 cut(s)	261, 1045, 1221, 1403, 1527
AvaII	GGWCC	1 cut(s)	961
BaeI	ACNNNNGTAYC	2 cut(s)	779, 812
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	3 cut(s)	17, 1372, 1762
BanII	GRGCYC	1 cut(s)	1314
Bbv12I	GWGCWC	3 cut(s)	524, 772, 1314
BbvCI	CCTCAGC	1 cut(s)	77
BbvI	GCAGC	5 cut(s)	194, 489, 543, 922, 1793
BccI	CCATC	5 cut(s)	407, 573, 605, 1037, 1207
BcgI	CGANNNNNNTGC	2 cut(s)	881, 915
BciT130I	CCWGG	3 cut(s)	879, 915, 1031
BclI	TGATCA	2 cut(s)	346, 1789
BcnI	CCSGG	1 cut(s)	1336
BcoDI	GTCTC	5 cut(s)	744, 801, 833, 879, 1554
BfaI	CTAG	4 cut(s)	321, 743, 1245, 1814
BfmI	CTRYAG	1 cut(s)	791
BfoI	RGCGCY	2 cut(s)	54, 1766
BfrI	CTTAAG	1 cut(s)	1013
BisI	GCNGC	8 cut(s)	126, 183, 478, 532, 911, 1181, 1554, 1782
BlpI	GCTNAGC	1 cut(s)	328
BlsI	GCNGC	8 cut(s)	127, 184, 479, 533, 912, 1182, 1555, 1783
Bme1390I	CCNGG	4 cut(s)	879, 915, 1031, 1336
Bme18I	GGWCC	1 cut(s)	961
BmeRI	GACNNNNNGTC	1 cut(s)	736
BmgT120I	GGNCC	1 cut(s)	961
BmiI	GGNNCC	8 cut(s)	19, 129, 418, 700, 1374, 1590, 1764, 1801
BmrFI	CCNGG	4 cut(s)	879, 915, 1031, 1336
BmsI	GCATC	4 cut(s)	296, 555, 1200, 1321
BpmI	CTGGAG	1 cut(s)	900
Bpu10I	CCTNAGC	3 cut(s)	77, 132, 1308
Bpu1102I	GCTNAGC	1 cut(s)	328
BpuEI	CTTGAG	2 cut(s)	299, 595
BpuMI	CCSGG	1 cut(s)	1336
BsaHI	GRCGYC	1 cut(s)	1763
BsaI	GGTCTC	2 cut(s)	744, 1554
Bsc4I	CCNNNNNNNGG	3 cut(s)	1036, 1472, 1570
Bse1I	ACTGG	2 cut(s)	1288, 1538
Bse3DI	GCAATG	1 cut(s)	723
BseBI	CCWGG	3 cut(s)	879, 915, 1031
BseGI	GGATG	3 cut(s)	805, 1191, 1199
BseLI	CCNNNNNNNGG	3 cut(s)	1036, 1472, 1570
BseMI	GCAATG	1 cut(s)	723
BseNI	ACTGG	2 cut(s)	1288, 1538
BseRI	GAGGAG	1 cut(s)	897
BseXI	GCAGC	5 cut(s)	194, 489, 543, 922, 1793
Bsh1236I	CGCG	2 cut(s)	1234, 1556
BshFI	GGCC	3 cut(s)	5, 202, 401
BshNI	GGYRCC	3 cut(s)	17, 1372, 1762
BsiHKAI	GWGCWC	3 cut(s)	524, 772, 1314
BsiSI	CCGG	1 cut(s)	1336
BslFI	GGGAC	2 cut(s)	1369, 1715
BslI	CCNNNNNNNGG	3 cut(s)	1036, 1472, 1570
BsmAI	GTCTC	5 cut(s)	744, 801, 833, 879, 1554
BsmFI	GGGAC	2 cut(s)	1369, 1715
BsmI	GAATGC	1 cut(s)	289
BsnI	GGCC	3 cut(s)	5, 202, 401
Bso31I	GGTCTC	2 cut(s)	744, 1554
Bsp1286I	GDGCHC	3 cut(s)	524, 772, 1314
Bsp1407I	TGTACA	1 cut(s)	151
Bsp143I	GATC	5 cut(s)	224, 346, 802, 1695, 1789
Bsp1720I	GCTNAGC	1 cut(s)	328
BspACI	CCGC	9 cut(s)	125, 332, 696, 1181, 1232, 1522, 1554, 1592, 1688
BspANI	GGCC	3 cut(s)	5, 202, 401
BspFNI	CGCG	2 cut(s)	1234, 1556
BspHI	TCATGA	1 cut(s)	1360
BspLI	GGNNCC	8 cut(s)	19, 129, 418, 700, 1374, 1590, 1764, 1801
BspPI	GGATC	3 cut(s)	232, 810, 1690
BspT107I	GGYRCC	3 cut(s)	17, 1372, 1762
BspTI	CTTAAG	1 cut(s)	1013
BspTNI	GGTCTC	2 cut(s)	744, 1554
BsrBI	CCGCTC	1 cut(s)	696
BsrDI	GCAATG	1 cut(s)	723
BsrGI	TGTACA	1 cut(s)	151
BsrI	ACTGG	2 cut(s)	1288, 1538
BssMI	GATC	5 cut(s)	224, 346, 802, 1695, 1789
BssNI	GRCGYC	1 cut(s)	1763
Bst2UI	CCWGG	3 cut(s)	879, 915, 1031
Bst4CI	ACNGT	2 cut(s)	61, 795
Bst6I	CTCTTC	2 cut(s)	903, 1120
BstACI	GRCGYC	1 cut(s)	1763
BstAFI	CTTAAG	1 cut(s)	1013
BstAUI	TGTACA	1 cut(s)	151
BstC8I	GCNNGC	5 cut(s)	49, 123, 554, 936, 1171
BstEII	GGTNACC	1 cut(s)	1286
BstF5I	GGATG	3 cut(s)	805, 1191, 1199
BstFNI	CGCG	2 cut(s)	1234, 1556
BstH2I	RGCGCY	2 cut(s)	54, 1766
BstHHI	GCGC	2 cut(s)	53, 1765
BstKTI	GATC	5 cut(s)	227, 349, 805, 1698, 1792
BstMAI	GTCTC	5 cut(s)	744, 801, 833, 879, 1554
BstMBI	GATC	5 cut(s)	224, 346, 802, 1695, 1789
BstMWI	GCNNNNNNNGC	7 cut(s)	182, 477, 528, 593, 602, 910, 919
BstNI	CCWGG	3 cut(s)	879, 915, 1031
BstNSI	RCATGY	3 cut(s)	173, 484, 991
BstPI	GGTNACC	1 cut(s)	1286
BstSCI	CCNGG	4 cut(s)	877, 913, 1029, 1334
BstSFI	CTRYAG	1 cut(s)	791
BstUI	CGCG	2 cut(s)	1234, 1556
BstV1I	GCAGC	5 cut(s)	194, 489, 543, 922, 1793
BstX2I	RGATCY	2 cut(s)	224, 1695
BstXI	CCANNNNNNTGG	1 cut(s)	992
BstYI	RGATCY	2 cut(s)	224, 1695
BsuRI	GGCC	3 cut(s)	5, 202, 401
BtgZI	GCGATG	1 cut(s)	426
BtsCI	GGATG	3 cut(s)	805, 1191, 1199
BtsIMutI	CAGTG	1 cut(s)	517
Cac8I	GCNNGC	5 cut(s)	49, 123, 554, 936, 1171
CaiI	CAGNNNCTG	3 cut(s)	188, 799, 1787
CciI	TCATGA	1 cut(s)	1360
CfoI	GCGC	2 cut(s)	53, 1765
Cfr13I	GGNCC	1 cut(s)	961
CseI	GACGC	1 cut(s)	1223
Csp6I	GTAC	2 cut(s)	152, 540
CspCI	CAANNNNNGTGG	4 cut(s)	279, 314, 421, 456
CviAII	CATG	7 cut(s)	170, 481, 855, 988, 1315, 1361, 1400
CviQI	GTAC	2 cut(s)	152, 540
DinI	GGCGCC	1 cut(s)	1764
DpnI	GATC	5 cut(s)	226, 348, 804, 1697, 1791
DpnII	GATC	5 cut(s)	224, 346, 802, 1695, 1789
DriI	GACNNNNNGTC	1 cut(s)	736
EaeI	YGGCCR	2 cut(s)	3, 399
Eam1104I	CTCTTC	2 cut(s)	903, 1120
Eam1105I	GACNNNNNGTC	1 cut(s)	736
EarI	CTCTTC	2 cut(s)	903, 1120
Ecl136II	GAGCTC	1 cut(s)	1312
Eco24I	GRGCYC	1 cut(s)	1314
Eco31I	GGTCTC	2 cut(s)	744, 1554
Eco32I	GATATC	1 cut(s)	363
Eco47I	GGWCC	1 cut(s)	961
Eco53kI	GAGCTC	1 cut(s)	1312
Eco91I	GGTNACC	1 cut(s)	1286
EcoICRI	GAGCTC	1 cut(s)	1312
EcoO109I	RGGNCCY	1 cut(s)	961
EcoO65I	GGTNACC	1 cut(s)	1286
EcoRI	GAATTC	1 cut(s)	253
EcoRII	CCWGG	3 cut(s)	877, 913, 1029
EcoRV	GATATC	1 cut(s)	363
EcoT22I	ATGCAT	1 cut(s)	289
EcoT38I	GRGCYC	1 cut(s)	1314
EgeI	GGCGCC	1 cut(s)	1764
EheI	GGCGCC	1 cut(s)	1764
FaeI	CATG	7 cut(s)	173, 484, 858, 991, 1318, 1364, 1403
FaqI	GGGAC	2 cut(s)	1369, 1715
FatI	CATG	7 cut(s)	169, 480, 854, 987, 1314, 1360, 1399
FauI	CCCGC	1 cut(s)	1695
FbaI	TGATCA	2 cut(s)	346, 1789
Fnu4HI	GCNGC	8 cut(s)	126, 183, 478, 532, 911, 1181, 1554, 1782
FokI	GGATG	3 cut(s)	792, 1178, 1186
FriOI	GRGCYC	1 cut(s)	1314
Fsp4HI	GCNGC	8 cut(s)	126, 183, 478, 532, 911, 1181, 1554, 1782
FspBI	CTAG	4 cut(s)	321, 743, 1245, 1814
GlaI	GCGC	2 cut(s)	52, 1764
GluI	GCNGC	8 cut(s)	126, 183, 478, 532, 911, 1181, 1554, 1782
GsuI	CTGGAG	1 cut(s)	900
HaeII	RGCGCY	2 cut(s)	54, 1766
HaeIII	GGCC	3 cut(s)	5, 202, 401
HapII	CCGG	1 cut(s)	1336
HgaI	GACGC	1 cut(s)	1223
HhaI	GCGC	2 cut(s)	53, 1765
Hin1I	GRCGYC	1 cut(s)	1763
Hin1II	CATG	7 cut(s)	173, 484, 858, 991, 1318, 1364, 1403
Hin6I	GCGC	2 cut(s)	51, 1763
HinP1I	GCGC	2 cut(s)	51, 1763
HindIII	AAGCTT	1 cut(s)	758
HinfI	GANTC	8 cut(s)	65, 302, 1357, 1431, 1462, 1483, 1532, 1723
HpaII	CCGG	1 cut(s)	1336
HphI	GGTGA	5 cut(s)	261, 1045, 1221, 1403, 1527
Hpy166II	GTNNAC	1 cut(s)	1422
Hpy8I	GTNNAC	1 cut(s)	1422
HpyAV	CCTTC	8 cut(s)	715, 820, 824, 1194, 1388, 1646, 1747, 1753
HpyCH4III	ACNGT	2 cut(s)	61, 795
HpyCH4IV	ACGT	2 cut(s)	1220, 1675
HpyCH4V	TGCA	8 cut(s)	176, 287, 716, 892, 956, 1173, 1191, 1682
HpyF10VI	GCNNNNNNNGC	7 cut(s)	182, 477, 528, 593, 602, 910, 919
HpySE526I	ACGT	2 cut(s)	1220, 1675
Hsp92I	GRCGYC	1 cut(s)	1763
Hsp92II	CATG	7 cut(s)	173, 484, 858, 991, 1318, 1364, 1403
HspAI	GCGC	2 cut(s)	51, 1763
KasI	GGCGCC	1 cut(s)	1762
Ksp22I	TGATCA	2 cut(s)	346, 1789
Kzo9I	GATC	5 cut(s)	224, 346, 802, 1695, 1789
LmnI	GCTCC	4 cut(s)	118, 133, 1216, 1789
Lsp1109I	GCAGC	5 cut(s)	194, 489, 543, 922, 1793
LweI	GCATC	4 cut(s)	296, 555, 1200, 1321
MaeI	CTAG	4 cut(s)	321, 743, 1245, 1814
MaeII	ACGT	2 cut(s)	1220, 1675
MaeIII	GTNAC	4 cut(s)	267, 310, 1007, 1286
MalI	GATC	5 cut(s)	226, 348, 804, 1697, 1791
MbiI	CCGCTC	1 cut(s)	696
MboI	GATC	5 cut(s)	224, 346, 802, 1695, 1789
MboII	GAAGA	5 cut(s)	370, 755, 890, 1052, 1107
MfeI	CAATTG	1 cut(s)	137
MflI	RGATCY	2 cut(s)	224, 1695
MhlI	GDGCHC	3 cut(s)	524, 772, 1314
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	1763
MlyI	GAGTC	2 cut(s)	1351, 1456
MmeI	TCCRAC	4 cut(s)	666, 842, 1121, 1219
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	289
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	2 cut(s)	1014, 1386
MslI	CAYNNNNRTG	1 cut(s)	1404
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	3 cut(s)	47, 308, 332
MspCI	CTTAAG	1 cut(s)	1013
MspI	CCGG	1 cut(s)	1336
MspR9I	CCNGG	4 cut(s)	879, 915, 1031, 1336
MunI	CAATTG	1 cut(s)	137
Mva1269I	GAATGC	1 cut(s)	289
MvaI	CCWGG	3 cut(s)	879, 915, 1031
MvnI	CGCG	2 cut(s)	1234, 1556
MwoI	GCNNNNNNNGC	7 cut(s)	182, 477, 528, 593, 602, 910, 919
NarI	GGCGCC	1 cut(s)	1763
NciI	CCSGG	1 cut(s)	1336
NdeII	GATC	5 cut(s)	224, 346, 802, 1695, 1789
NlaIII	CATG	7 cut(s)	173, 484, 858, 991, 1318, 1364, 1403
NlaIV	GGNNCC	8 cut(s)	19, 129, 418, 700, 1374, 1590, 1764, 1801
NmuCI	GTSAC	2 cut(s)	267, 1007
NsiI	ATGCAT	1 cut(s)	289
NspI	RCATGY	3 cut(s)	173, 484, 991
PagI	TCATGA	1 cut(s)	1360
PctI	GAATGC	1 cut(s)	289
PfeI	GAWTC	6 cut(s)	65, 302, 1431, 1483, 1532, 1723
PflFI	GACNNNGTC	1 cut(s)	1738
PfoI	TCCNGGA	1 cut(s)	877
PkrI	GCNGC	8 cut(s)	127, 184, 479, 533, 912, 1182, 1555, 1783
PleI	GAGTC	2 cut(s)	1351, 1456
PluTI	GGCGCC	1 cut(s)	1766
PpsI	GAGTC	2 cut(s)	1351, 1456
PpuMI	RGGWCCY	1 cut(s)	961
Psp124BI	GAGCTC	1 cut(s)	1314
Psp5II	RGGWCCY	1 cut(s)	961
Psp6I	CCWGG	3 cut(s)	877, 913, 1029
PspEI	GGTNACC	1 cut(s)	1286
PspGI	CCWGG	3 cut(s)	877, 913, 1029
PspN4I	GGNNCC	8 cut(s)	19, 129, 418, 700, 1374, 1590, 1764, 1801
PspPI	GGNCC	1 cut(s)	961
PspPPI	RGGWCCY	1 cut(s)	961
PstNI	CAGNNNCTG	3 cut(s)	188, 799, 1787
PsuI	RGATCY	2 cut(s)	224, 1695
PsyI	GACNNNGTC	1 cut(s)	1738
PvuII	CAGCTG	2 cut(s)	47, 308
RsaI	GTAC	2 cut(s)	153, 541
RsaNI	GTAC	2 cut(s)	152, 540
RseI	CAYNNNNRTG	1 cut(s)	1404
SacI	GAGCTC	1 cut(s)	1314
SaqAI	TTAA	2 cut(s)	1014, 1386
SatI	GCNGC	8 cut(s)	126, 183, 478, 532, 911, 1181, 1554, 1782
Sau3AI	GATC	5 cut(s)	224, 346, 802, 1695, 1789
Sau96I	GGNCC	1 cut(s)	961
SchI	GAGTC	2 cut(s)	1351, 1456
ScrFI	CCNGG	4 cut(s)	879, 915, 1031, 1336
SduI	GDGCHC	3 cut(s)	524, 772, 1314
SfaNI	GCATC	4 cut(s)	296, 555, 1200, 1321
SfcI	CTRYAG	1 cut(s)	791
SfoI	GGCGCC	1 cut(s)	1764
SinI	GGWCC	1 cut(s)	961
SmiMI	CAYNNNNRTG	1 cut(s)	1404
SmlI	CTYRAG	3 cut(s)	278, 574, 1013
SmoI	CTYRAG	3 cut(s)	278, 574, 1013
SsiI	CCGC	9 cut(s)	125, 332, 696, 1181, 1232, 1522, 1554, 1592, 1688
SspDI	GGCGCC	1 cut(s)	1762
SspMI	CTAG	4 cut(s)	321, 743, 1245, 1814
SstI	GAGCTC	1 cut(s)	1314
StyD4I	CCNGG	4 cut(s)	877, 913, 1029, 1334
TaaI	ACNGT	2 cut(s)	61, 795
TaiI	ACGT	2 cut(s)	1223, 1678
TaqI	TCGA	4 cut(s)	32, 257, 1486, 1745
TatI	WGTACW	1 cut(s)	151
TauI	GCSGC	3 cut(s)	128, 1183, 1556
TfiI	GAWTC	6 cut(s)	65, 302, 1431, 1483, 1532, 1723
Tru1I	TTAA	2 cut(s)	1014, 1386
Tru9I	TTAA	2 cut(s)	1014, 1386
TscAI	CASTG	1 cut(s)	517
TseFI	GTSAC	2 cut(s)	267, 1007
TseI	GCWGC	5 cut(s)	182, 477, 531, 910, 1781
Tsp45I	GTSAC	2 cut(s)	267, 1007
TspDTI	ATGAA	6 cut(s)	150, 229, 252, 734, 843, 1790
TspGWI	ACGGA	1 cut(s)	1070
TspRI	CASTG	1 cut(s)	517
Tth111I	GACNNNGTC	1 cut(s)	1738
Vha464I	CTTAAG	1 cut(s)	1013
VpaK11BI	GGWCC	1 cut(s)	961
XapI	RAATTY	7 cut(s)	157, 208, 253, 454, 848, 944, 1817
XceI	RCATGY	3 cut(s)	173, 484, 991
XcmI	CCANNNNNNNNNTGG	1 cut(s)	118
XspI	CTAG	4 cut(s)	321, 743, 1245, 1814
Zsp2I	ATGCAT	1 cut(s)	289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.