Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001680.1

Orthogroup ID

OG0001306

Physical Location & Seq

Genomic Coordinates Reverse (-)

14287 .. 28007

Gene Structure 13721 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001680.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2973 bp

atggattctgatagcgaagcggctccatttgatcggcgatcagctgtgggggtggttcgggggcggggaggggaattagagaggcagttcgataggcagagcagggtaaggaggcagaggatcgagagcgctagcgacagcgaagaggatgaagggatcgaggcggtgagggagaagctcatgtttgaattcaaaatggcggtggatgaaatgaaagacgcgattttgagaggaaagaaggaagaggtggaggaggacgaagacgagccggcgccggttgctactgttattgttactgacatgacagcgacagtggaagaggaggatgcagaggctatggcggcagaggaggggcgaactggtttcccggttggttgcgccggaagaggagagttgctgggcggagaagaaggagatcagttttggtggagaagaagacatgggcgtctgccgggtgcccagagcatttttctgggtgcaaaaagatttgattttttttttttttatcatgtcacccagctttcgttttgggtctgtccgccgggagttgagtgcgaaaaacatggatttgtagcaggaattggagaggatgatggcagcgttggtgatggtttgggcggaaaagaaggagaggagagagagatggtttgggagaaggagcggagcttgcggtgggagtggaagaagggaagagattcctgcttcataaaccttatttcctctgaaatcttgatggcctcaaaacaacctggtgctagaccgtcctcgagactgcaaccaaaagcagctggtgttcaaacggtagaatctgatgatctcaggcaattgcaatttcccacacacattatgaaagcaaccaaatcggacctgttagctcccgagcaattcctgaaatctctacaaaattcatcaaagcctgttgcagtagaagcatctgacaataaaagcccagagaattccaatcaaacaggatctgctgatttgttgattactaaattgaattcgatttcgttgtcagccaaccttgataagtcatccaaggaagtagattcagctgtcaatcacactagaggttcactggaaaatcatgctgatcaagaaaagaagatatcagagtatgcaagtgtcaaggacagctcagtctctgccaaggttagcgatggagccagcagtattgccaagaccagcggaagtgccaagaattttgttgaaagtggaaagagcagtatgtgtagaggaagcacaagcagtgacgtcagtgatgagagcacttgtagcagctttagtaccagcatcagcaagccacacaaagcaaatgacttgagatgggaagccatacaagctgtccgagcaagagatggggttctgggtttaggtcatttcagattgctaaagaggttaggctgtggggatattggcagtgtctatctgtcggagttgagtggaaccaaatgttattttgcaatgaaggttatggataaagaatctctagcaagtcgtaaaaagcttcttcgtgctcagacagaaagagagatactacaatctctggatcatcccttccttccaacattatacacccactttgagacagataaattttcatgcttggtaatggagttctgtcctggaggagacttgcacacgcttcggcagaggcagccgggaaagcatttttctgagcaggcagtaaaattctatgttgcagaggtcctgctatctctggaatacctccacatgcttggaattgtctaccgtgaccttaagccagaaaatgtcctggtgagggaagatggacatataatgctctctgattttgacctctcactccgttgtgctgttagtccaactcttgtcaactcttcaatggagtttgagcccttgcgaaaaaaccctgtttattgtgttcagccagcttgcattgagccgccttcctgcatccaaccatcctgtgtagctcctacaacgtgcttctcaccgcgtctgttttctagcaagtccaaaaaggacaaaaaaccgaagaacgaaattggtaaccaagtacgaccattacctgagctcatggcagagccaaccgatgcccggtctatgtcgtttgttgggactcatgagtatttggcacctgagattattaagggtgaaggtcatggaagtgctgttgattggtggacttttggaatctttctgtatgagctgttgtttgattgtttcgcccagataataatggggatcgtttctcaggaggcgatcaagcaattccaagctttaatggatcaagttgatgaaccactgaagagaacatttcagaatgttcaccaaggatttctagttgagacttttgctcgttttctcaaagcaagagagtggaatgttgtcaaagcccataaaatgttgatggattgtttaaactggagggtacaaaatgagattgacagtatattggccaaacccataattccaactgaattgtacagaggagtgcgagactcacagctcataggcctttcaggttactctagagagggtatgccagtctttgctattggggttgggttaagtacatttaataaagcgtctgttcattactatgtgcagtcacacattcaaatcaatgaatatcgagatcgtgttattttgccgtctgcatcgaagaagtatggtaagcctattaccagctcgctcaggtatgtccgcttgaaaagaaccctgcttgattggttgaacagattcattgatcaaagattgctgcttgatgaagttgtagagctgttgatgaaaatgctctacaactacatcaagcagcaatctttgatcaatgaatctgttcaaccaatcaagcagggttcttttcaagcggacatacctgagcgagctgcagaaggaacacagatgacaatagaatctgagttcaacaaatttggtaacggcgatggggtatctgactctctaaatgccctcaaaatcaatggtgactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

990

Amino Acids

110.77

Weight (kDa)

5.74

Isoelectric Point (pI)

49.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26610 AT5G47750 AT5G55910 AT5G55910
fragaria_vesca	FvH4_3g00260 FvH4_3g42710 FvH4_3g42710 FvH4_3g42710 FvH4_3g42710 FvH4_3g42710 FvH4_3g42710
malus_domestica	MD03G1029500.v1.1 MD09G1025300.v1.1 MD10G1339900.v1.1 MD11G1032900.v1.1
prunus_persica	Prupe.4G002900_v2.0.a1 Prupe.4G002900_v2.0.a1 Prupe.6G025600_v2.0.a1 Prupe.6G025600_v2.0.a1 Prupe.6G025600_v2.0.a1 Prupe.6G025600_v2.0.a1 Prupe.6G025600_v2.0.a1
pyrus_communis	pycom03g02440 pycom10g28980 pycom11g02860
rosa_chinensis	RchiOBHm_Chr5g0000381 RchiOBHm_Chr5g0076451
rosa_laevigata	RLG00000030861 RLG00000030862 RLG00000036620
rosa_multiflora	Rmu_co8411395.1_g000001 Rmu_sc0000369.1_g000018 Rmu_sc0001680.1_g000004 Rmu_ssc0000181.1_g000002 Rmu_ssc0000385.1_g000014
rosa_roxburghii	Rroxscaffold_1G00075770 Rroxscaffold_1G00075780
rosa_rugosa	Rorug04G0383300 Rorug04G0383300 Rorug05G0447900 Rorug05G0448000 Rorug05G0448100
rosa_samantha	Rh5AG003200 Rh5AG502800 Rh5BG004200 Rh5BG524500 Rh5CG003400 Rh5CG548100 Rh5DG003100 Rh5DG003200 Rh5DG536300 Rh7BG161800
rosa_wichuraiana	Rw5G000310 Rw5G046640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	444, 1139
AatII	GACGTC	1 cut(s)	1257
AccB1I	GGYRCC	3 cut(s)	271, 455, 2116
AccBSI	CCGCTC	1 cut(s)	661
AccI	GTMKAC	1 cut(s)	1749
AccII	CGCG	2 cut(s)	221, 1978
AclWI	GGATC	6 cut(s)	128, 164, 979, 1557, 2234, 2277
AcoI	YGGCCR	1 cut(s)	2439
AcsI	RAATTY	8 cut(s)	188, 904, 955, 1000, 1201, 1595, 1691, 2912
AcuI	CTGAAG	1 cut(s)	2309
AcyI	GRCGYC	3 cut(s)	272, 445, 1254
AfaI	GTAC	5 cut(s)	1288, 2040, 2415, 2468, 2557
AfeI	AGCGCT	1 cut(s)	130
AfiI	CCNNNNNNNGG	2 cut(s)	1783, 2079
AflII	CTTAAG	1 cut(s)	1760
AjnI	CCWGG	3 cut(s)	748, 1624, 1776
Alw21I	GWGCWC	3 cut(s)	1271, 1519, 2058
Alw26I	GTCTC	6 cut(s)	763, 1147, 1580, 1626, 2324, 2475
AlwI	GGATC	6 cut(s)	128, 164, 979, 1557, 2234, 2277
AlwNI	CAGNNNCTG	2 cut(s)	974, 1145
Ama87I	CYCGRG	2 cut(s)	766, 878
Aor51HI	AGCGCT	1 cut(s)	130
AoxI	GGCC	3 cut(s)	735, 2439, 2497
ApeKI	GCWGC	7 cut(s)	597, 785, 1278, 1657, 2743, 2797, 2870
ApoI	RAATTY	8 cut(s)	188, 904, 955, 1000, 1201, 1595, 1691, 2912
Asp700I	GAANNNNTTC	3 cut(s)	694, 2723, 2820
AspLEI	GCGC	3 cut(s)	131, 274, 380
AspS9I	GGNCC	2 cut(s)	865, 1708
AsuC2I	CCSGG	5 cut(s)	368, 453, 543, 1662, 2080
AsuHPI	GGTGA	7 cut(s)	178, 505, 617, 1792, 1965, 2147, 2303
AsuNHI	GCTAGC	1 cut(s)	131
AvaI	CYCGRG	2 cut(s)	766, 878
AvaII	GGWCC	2 cut(s)	865, 1708
BaeGI	GKGCMC	1 cut(s)	460
BalI	TGGCCA	1 cut(s)	2441
BanI	GGYRCC	3 cut(s)	271, 455, 2116
BanII	GRGCYC	2 cut(s)	1878, 2058
BbsI	GAAGAC	2 cut(s)	267, 442
Bbv12I	GWGCWC	3 cut(s)	1271, 1519, 2058
BbvI	GCAGC	7 cut(s)	609, 797, 1290, 1669, 2730, 2809, 2857
BceAI	ACGGC	2 cut(s)	2620, 2938
BcgI	CGANNNNNNTGC	4 cut(s)	843, 877, 1628, 1662
BciT130I	CCWGG	3 cut(s)	750, 1626, 1778
BclI	TGATCA	3 cut(s)	1093, 2731, 2808
BcnI	CCSGG	5 cut(s)	368, 453, 543, 1662, 2080
BcoDI	GTCTC	6 cut(s)	763, 1147, 1580, 1626, 2324, 2475
BfaI	CTAG	7 cut(s)	132, 756, 1068, 1490, 1989, 2324, 2514
BfmI	CTRYAG	1 cut(s)	2871
BfoI	RGCGCY	2 cut(s)	132, 275
BfrI	CTTAAG	1 cut(s)	1760
Bme1390I	CCNGG	8 cut(s)	368, 453, 543, 750, 1626, 1662, 1778, 2080
Bme18I	GGWCC	2 cut(s)	865, 1708
BmeT110I	CYCGRG	2 cut(s)	766, 878
BmgT120I	GGNCC	2 cut(s)	865, 1708
BmiI	GGNNCC	6 cut(s)	24, 273, 457, 1165, 1447, 2118
BmrFI	CCNGG	8 cut(s)	368, 453, 543, 750, 1626, 1662, 1778, 2080
BmsI	GCATC	6 cut(s)	316, 941, 1302, 1944, 2065, 2651
BmtI	GCTAGC	1 cut(s)	135
BpiI	GAAGAC	2 cut(s)	267, 442
BpmI	CTGGAG	2 cut(s)	1647, 2428
Bpu10I	CCTNAGC	3 cut(s)	2052, 2678, 2862
BpuEI	CTTGAG	1 cut(s)	1342
BpuMI	CCSGG	5 cut(s)	368, 453, 543, 1662, 2080
BsaHI	GRCGYC	3 cut(s)	272, 445, 1254
BsaJI	CCNNGG	3 cut(s)	1038, 1149, 2314
Bsc4I	CCNNNNNNNGG	2 cut(s)	1783, 2079
Bse118I	RCCGGY	2 cut(s)	268, 274
Bse1I	ACTGG	4 cut(s)	364, 1083, 2411, 2528
Bse3DI	GCAATG	1 cut(s)	1470
BseBI	CCWGG	3 cut(s)	750, 1626, 1778
BseDI	CCNNGG	3 cut(s)	1038, 1149, 2314
BseGI	GGATG	8 cut(s)	154, 211, 331, 595, 1034, 1552, 1935, 1943
BseLI	CCNNNNNNNGG	2 cut(s)	1783, 2079
BseMI	GCAATG	1 cut(s)	1470
BseNI	ACTGG	4 cut(s)	364, 1083, 2411, 2528
BseRI	GAGGAG	7 cut(s)	266, 335, 362, 402, 647, 1644, 2487
BseSI	GKGCMC	1 cut(s)	460
BseXI	GCAGC	7 cut(s)	609, 797, 1290, 1669, 2730, 2809, 2857
BseYI	CCCAGC	2 cut(s)	397, 516
BsgI	GTGCAG	1 cut(s)	2609
Bsh1236I	CGCG	2 cut(s)	221, 1978
BshFI	GGCC	3 cut(s)	737, 2441, 2499
BshNI	GGYRCC	3 cut(s)	271, 455, 2116
BsiHKAI	GWGCWC	3 cut(s)	1271, 1519, 2058
BsiHKCI	CYCGRG	2 cut(s)	766, 878
BsiSI	CCGG	8 cut(s)	269, 275, 368, 381, 452, 542, 1661, 2080
BslFI	GGGAC	1 cut(s)	2113
BslI	CCNNNNNNNGG	2 cut(s)	1783, 2079
BsmAI	GTCTC	6 cut(s)	763, 1147, 1580, 1626, 2324, 2475
BsmFI	GGGAC	1 cut(s)	2113
BsnI	GGCC	3 cut(s)	737, 2441, 2499
BsoBI	CYCGRG	2 cut(s)	766, 878
Bsp1286I	GDGCHC	5 cut(s)	460, 1271, 1519, 1878, 2058
Bsp1407I	TGTACA	1 cut(s)	2466
BspANI	GGCC	3 cut(s)	737, 2441, 2499
BspFNI	CGCG	2 cut(s)	221, 1978
BspHI	TCATGA	1 cut(s)	2104
BspLI	GGNNCC	6 cut(s)	24, 273, 457, 1165, 1447, 2118
BspMAI	CTGCAG	1 cut(s)	2875
BspOI	GCTAGC	1 cut(s)	135
BspPI	GGATC	6 cut(s)	128, 164, 979, 1557, 2234, 2277
BspT107I	GGYRCC	3 cut(s)	271, 455, 2116
BspTI	CTTAAG	1 cut(s)	1760
BsrBI	CCGCTC	1 cut(s)	661
BsrDI	GCAATG	1 cut(s)	1470
BsrFI	RCCGGY	2 cut(s)	268, 274
BsrGI	TGTACA	1 cut(s)	2466
BsrI	ACTGG	4 cut(s)	364, 1083, 2411, 2528
BssAI	RCCGGY	2 cut(s)	268, 274
BssECI	CCNNGG	3 cut(s)	1038, 1149, 2314
BssNI	GRCGYC	3 cut(s)	272, 445, 1254
BssT1I	CCWWGG	3 cut(s)	1038, 1149, 2314
Bst2UI	CCWGG	3 cut(s)	750, 1626, 1778
Bst4CI	ACNGT	6 cut(s)	286, 313, 762, 802, 1754, 2432
Bst6I	CTCTTC	7 cut(s)	138, 237, 312, 379, 685, 1864, 2285
BstACI	GRCGYC	3 cut(s)	272, 445, 1254
BstAFI	CTTAAG	1 cut(s)	1760
BstAUI	TGTACA	1 cut(s)	2466
BstEII	GGTNACC	1 cut(s)	2030
BstF5I	GGATG	8 cut(s)	154, 211, 331, 595, 1034, 1552, 1935, 1943
BstFNI	CGCG	2 cut(s)	221, 1978
BstH2I	RGCGCY	2 cut(s)	132, 275
BstHHI	GCGC	3 cut(s)	131, 274, 380
BstMAI	GTCTC	6 cut(s)	763, 1147, 1580, 1626, 2324, 2475
BstMWI	GCNNNNNNNGC	9 cut(s)	278, 341, 667, 929, 1275, 1340, 1349, 1657, 1666
BstNI	CCWGG	3 cut(s)	750, 1626, 1778
BstNSI	RCATGY	1 cut(s)	1738
BstPI	GGTNACC	1 cut(s)	2030
BstSCI	CCNGG	8 cut(s)	366, 451, 541, 748, 1624, 1660, 1776, 2078
BstSFI	CTRYAG	1 cut(s)	2871
BstSLI	GKGCMC	1 cut(s)	460
BstUI	CGCG	2 cut(s)	221, 1978
BstV1I	GCAGC	7 cut(s)	609, 797, 1290, 1669, 2730, 2809, 2857
BstV2I	GAAGAC	2 cut(s)	267, 442
BstX2I	RGATCY	1 cut(s)	971
BstXI	CCANNNNNNTGG	1 cut(s)	1739
BstYI	RGATCY	1 cut(s)	971
BsuRI	GGCC	3 cut(s)	737, 2441, 2499
BtgZI	GCGATG	2 cut(s)	1173, 2940
BtsCI	GGATG	8 cut(s)	154, 211, 331, 595, 1034, 1552, 1935, 1943
BtsI	GCAGTG	2 cut(s)	1255, 1426
BtsIMutI	CAGTG	6 cut(s)	318, 1076, 1255, 1264, 1426, 2285
CaiI	CAGNNNCTG	2 cut(s)	974, 1145
CciI	TCATGA	1 cut(s)	2104
CfoI	GCGC	3 cut(s)	131, 274, 380
Cfr10I	RCCGGY	2 cut(s)	268, 274
Cfr13I	GGNCC	2 cut(s)	865, 1708
CseI	GACGC	4 cut(s)	227, 434, 1967, 2559
CsiI	ACCWGGT	1 cut(s)	748
Csp6I	GTAC	5 cut(s)	1287, 2039, 2414, 2467, 2556
CviQI	GTAC	5 cut(s)	1287, 2039, 2414, 2467, 2556
DinI	GGCGCC	1 cut(s)	273
DraI	TTTAAA	1 cut(s)	2403
DrdI	GACNNNNNNGTC	2 cut(s)	444, 1139
DseDI	GACNNNNNNGTC	2 cut(s)	444, 1139
EaeI	YGGCCR	1 cut(s)	2439
Eam1104I	CTCTTC	7 cut(s)	138, 237, 312, 379, 685, 1864, 2285
EarI	CTCTTC	7 cut(s)	138, 237, 312, 379, 685, 1864, 2285
EciI	GGCGGA	3 cut(s)	417, 528, 633
Ecl136II	GAGCTC	1 cut(s)	2056
Eco130I	CCWWGG	3 cut(s)	1038, 1149, 2314
Eco147I	AGGCCT	1 cut(s)	2499
Eco24I	GRGCYC	2 cut(s)	1878, 2058
Eco32I	GATATC	1 cut(s)	1110
Eco47I	GGWCC	2 cut(s)	865, 1708
Eco47III	AGCGCT	1 cut(s)	130
Eco53kI	GAGCTC	1 cut(s)	2056
Eco57I	CTGAAG	1 cut(s)	2309
Eco88I	CYCGRG	2 cut(s)	766, 878
Eco91I	GGTNACC	1 cut(s)	2030
EcoICRI	GAGCTC	1 cut(s)	2056
EcoO109I	RGGNCCY	1 cut(s)	1708
EcoO65I	GGTNACC	1 cut(s)	2030
EcoRI	GAATTC	3 cut(s)	188, 955, 1000
EcoRII	CCWGG	3 cut(s)	748, 1624, 1776
EcoRV	GATATC	1 cut(s)	1110
EcoT14I	CCWWGG	3 cut(s)	1038, 1149, 2314
EcoT38I	GRGCYC	2 cut(s)	1878, 2058
EgeI	GGCGCC	1 cut(s)	273
EheI	GGCGCC	1 cut(s)	273
ErhI	CCWWGG	3 cut(s)	1038, 1149, 2314
FaqI	GGGAC	1 cut(s)	2113
FauI	CCCGC	1 cut(s)	57
FbaI	TGATCA	3 cut(s)	1093, 2731, 2808
FblI	GTMKAC	1 cut(s)	1749
FokI	GGATG	8 cut(s)	161, 218, 338, 602, 1021, 1539, 1922, 1930
FriOI	GRGCYC	2 cut(s)	1878, 2058
FspBI	CTAG	7 cut(s)	132, 756, 1068, 1490, 1989, 2324, 2514
GlaI	GCGC	3 cut(s)	130, 273, 379
GsaI	CCCAGC	2 cut(s)	401, 520
GsuI	CTGGAG	2 cut(s)	1647, 2428
HaeII	RGCGCY	2 cut(s)	132, 275
HaeIII	GGCC	3 cut(s)	737, 2441, 2499
HapII	CCGG	8 cut(s)	269, 275, 368, 381, 452, 542, 1661, 2080
HgaI	GACGC	4 cut(s)	227, 434, 1967, 2559
HhaI	GCGC	3 cut(s)	131, 274, 380
Hin1I	GRCGYC	3 cut(s)	272, 445, 1254
Hin6I	GCGC	3 cut(s)	129, 272, 378
HinP1I	GCGC	3 cut(s)	129, 272, 378
HincII	GTYRAC	1 cut(s)	1855
HindII	GTYRAC	1 cut(s)	1855
HindIII	AAGCTT	2 cut(s)	1505, 2259
HpaII	CCGG	8 cut(s)	269, 275, 368, 381, 452, 542, 1661, 2080
HphI	GGTGA	7 cut(s)	178, 505, 617, 1792, 1965, 2147, 2303
Hpy166II	GTNNAC	5 cut(s)	1076, 1750, 1855, 2166, 2311
Hpy8I	GTNNAC	5 cut(s)	1076, 1750, 1855, 2166, 2311
HpyCH4III	ACNGT	6 cut(s)	286, 313, 762, 802, 1754, 2432
HpyCH4IV	ACGT	2 cut(s)	1254, 1964
HpyF10VI	GCNNNNNNNGC	9 cut(s)	278, 341, 667, 929, 1275, 1340, 1349, 1657, 1666
HpySE526I	ACGT	2 cut(s)	1254, 1964
Hsp92I	GRCGYC	3 cut(s)	272, 445, 1254
HspAI	GCGC	3 cut(s)	129, 272, 378
KasI	GGCGCC	1 cut(s)	271
KroI	GCCGGC	1 cut(s)	268
KroNI	GCCGGC	1 cut(s)	270
Ksp22I	TGATCA	3 cut(s)	1093, 2731, 2808
LmnI	GCTCC	6 cut(s)	28, 658, 663, 880, 1163, 1960
Lsp1109I	GCAGC	7 cut(s)	609, 797, 1290, 1669, 2730, 2809, 2857
LweI	GCATC	6 cut(s)	316, 941, 1302, 1944, 2065, 2651
MabI	ACCWGGT	1 cut(s)	748
MaeI	CTAG	7 cut(s)	132, 756, 1068, 1490, 1989, 2324, 2514
MaeII	ACGT	2 cut(s)	1254, 1964
MaeIII	GTNAC	9 cut(s)	292, 511, 1250, 1754, 2030, 2507, 2592, 2918, 2966
MbiI	CCGCTC	1 cut(s)	661
MfeI	CAATTG	1 cut(s)	824
MflI	RGATCY	1 cut(s)	971
MhlI	GDGCHC	5 cut(s)	460, 1271, 1519, 1878, 2058
MlsI	TGGCCA	1 cut(s)	2441
MluNI	TGGCCA	1 cut(s)	2441
Mly113I	GGCGCC	1 cut(s)	272
MlyI	GAGTC	3 cut(s)	2095, 2477, 2933
MmeI	TCCRAC	5 cut(s)	1413, 1589, 1868, 1963, 2480
Mox20I	TGGCCA	1 cut(s)	2441
MroNI	GCCGGC	1 cut(s)	268
MroXI	GAANNNNTTC	3 cut(s)	694, 2723, 2820
MscI	TGGCCA	1 cut(s)	2441
MseI	TTAA	6 cut(s)	1761, 2130, 2264, 2402, 2552, 2562
MslI	CAYNNNNRTG	2 cut(s)	2148, 2583
Msp20I	TGGCCA	1 cut(s)	2441
MspA1I	CMGCKG	4 cut(s)	44, 788, 1055, 1188
MspCI	CTTAAG	1 cut(s)	1760
MspI	CCGG	8 cut(s)	269, 275, 368, 381, 452, 542, 1661, 2080
MspR9I	CCNGG	8 cut(s)	368, 453, 543, 750, 1626, 1662, 1778, 2080
MssI	GTTTAAAC	1 cut(s)	2403
MunI	CAATTG	1 cut(s)	824
MvaI	CCWGG	3 cut(s)	750, 1626, 1778
MvnI	CGCG	2 cut(s)	221, 1978
MwoI	GCNNNNNNNGC	9 cut(s)	278, 341, 667, 929, 1275, 1340, 1349, 1657, 1666
NaeI	GCCGGC	1 cut(s)	270
NarI	GGCGCC	1 cut(s)	272
NciI	CCSGG	5 cut(s)	368, 453, 543, 1662, 2080
NgoMIV	GCCGGC	1 cut(s)	268
NheI	GCTAGC	1 cut(s)	131
NlaIV	GGNNCC	6 cut(s)	24, 273, 457, 1165, 1447, 2118
NmuCI	GTSAC	5 cut(s)	511, 1250, 1754, 2592, 2966
NspI	RCATGY	1 cut(s)	1738
PaeR7I	CTCGAG	1 cut(s)	766
PagI	TCATGA	1 cut(s)	2104
PceI	AGGCCT	1 cut(s)	2499
PdiI	GCCGGC	1 cut(s)	270
PdmI	GAANNNNTTC	3 cut(s)	694, 2723, 2820
PfeI	GAWTC	9 cut(s)	5, 695, 806, 1049, 1484, 2175, 2724, 2816, 2897
PfoI	TCCNGGA	1 cut(s)	1624
PleI	GAGTC	3 cut(s)	2095, 2477, 2933
PluTI	GGCGCC	1 cut(s)	275
PmeI	GTTTAAAC	1 cut(s)	2403
PpsI	GAGTC	3 cut(s)	2095, 2477, 2933
PpuMI	RGGWCCY	1 cut(s)	1708
Psp124BI	GAGCTC	1 cut(s)	2058
Psp5II	RGGWCCY	1 cut(s)	1708
Psp6I	CCWGG	3 cut(s)	748, 1624, 1776
PspEI	GGTNACC	1 cut(s)	2030
PspFI	CCCAGC	2 cut(s)	397, 516
PspGI	CCWGG	3 cut(s)	748, 1624, 1776
PspN4I	GGNNCC	6 cut(s)	24, 273, 457, 1165, 1447, 2118
PspPI	GGNCC	2 cut(s)	865, 1708
PspPPI	RGGWCCY	1 cut(s)	1708
PstI	CTGCAG	1 cut(s)	2875
PstNI	CAGNNNCTG	2 cut(s)	974, 1145
PsuI	RGATCY	1 cut(s)	971
PvuII	CAGCTG	3 cut(s)	44, 788, 1055
RsaI	GTAC	5 cut(s)	1288, 2040, 2415, 2468, 2557
RsaNI	GTAC	5 cut(s)	1287, 2039, 2414, 2467, 2556
RseI	CAYNNNNRTG	2 cut(s)	2148, 2583
SacI	GAGCTC	1 cut(s)	2058
SaqAI	TTAA	6 cut(s)	1761, 2130, 2264, 2402, 2552, 2562
Sau96I	GGNCC	2 cut(s)	865, 1708
SchI	GAGTC	3 cut(s)	2095, 2477, 2933
ScrFI	CCNGG	8 cut(s)	368, 453, 543, 750, 1626, 1662, 1778, 2080
SduI	GDGCHC	5 cut(s)	460, 1271, 1519, 1878, 2058
SexAI	ACCWGGT	1 cut(s)	748
SfaNI	GCATC	6 cut(s)	316, 941, 1302, 1944, 2065, 2651
SfcI	CTRYAG	1 cut(s)	2871
SfoI	GGCGCC	1 cut(s)	273
Sfr274I	CTCGAG	1 cut(s)	766
SinI	GGWCC	2 cut(s)	865, 1708
SlaI	CTCGAG	1 cut(s)	766
SmiMI	CAYNNNNRTG	2 cut(s)	2148, 2583
SmlI	CTYRAG	3 cut(s)	766, 1321, 1760
SmoI	CTYRAG	3 cut(s)	766, 1321, 1760
SseBI	AGGCCT	1 cut(s)	2499
SspDI	GGCGCC	1 cut(s)	271
SspMI	CTAG	7 cut(s)	132, 756, 1068, 1490, 1989, 2324, 2514
SstI	GAGCTC	1 cut(s)	2058
StuI	AGGCCT	1 cut(s)	2499
StyD4I	CCNGG	8 cut(s)	366, 451, 541, 748, 1624, 1660, 1776, 2078
StyI	CCWWGG	3 cut(s)	1038, 1149, 2314
TaaI	ACNGT	6 cut(s)	286, 313, 762, 802, 1754, 2432
TaiI	ACGT	2 cut(s)	1257, 1967
TaqI	TCGA	7 cut(s)	90, 123, 159, 767, 1004, 2617, 2645
TatI	WGTACW	2 cut(s)	2466, 2555
TauI	GCSGC	3 cut(s)	23, 344, 1927
TfiI	GAWTC	9 cut(s)	5, 695, 806, 1049, 1484, 2175, 2724, 2816, 2897
Tru1I	TTAA	6 cut(s)	1761, 2130, 2264, 2402, 2552, 2562
Tru9I	TTAA	6 cut(s)	1761, 2130, 2264, 2402, 2552, 2562
TscAI	CASTG	6 cut(s)	318, 1083, 1255, 1264, 1426, 2292
TseFI	GTSAC	5 cut(s)	511, 1250, 1754, 2592, 2966
TseI	GCWGC	7 cut(s)	597, 785, 1278, 1657, 2743, 2797, 2870
Tsp45I	GTSAC	5 cut(s)	511, 1250, 1754, 2592, 2966
TspGWI	ACGGA	1 cut(s)	1817
TspRI	CASTG	6 cut(s)	318, 1083, 1255, 1264, 1426, 2292
Vha464I	CTTAAG	1 cut(s)	1760
VpaK11BI	GGWCC	2 cut(s)	865, 1708
XapI	RAATTY	8 cut(s)	188, 904, 955, 1000, 1201, 1595, 1691, 2912
XbaI	TCTAGA	1 cut(s)	2513
XceI	RCATGY	1 cut(s)	1738
XhoI	CTCGAG	1 cut(s)	766
XmiI	GTMKAC	1 cut(s)	1749
XmnI	GAANNNNTTC	3 cut(s)	694, 2723, 2820
XspI	CTAG	7 cut(s)	132, 756, 1068, 1490, 1989, 2324, 2514
ZraI	GACGTC	1 cut(s)	1255

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.