Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001306

Physical Location & Seq

Genomic Coordinates Reverse (-)

96382030 .. 96386034

Gene Structure 4005 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00075770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1839 bp

ATGGCCTCAAAACCTGCTGCCAGAGCGTCCTCCAGACTGCAGCCAAAAGCAGCTGCTGTTCAAACGGTAGAATCTGATGATCTCAGGCAATTTCCCACACACATTATGAAAGCAACCAAATCGGAGCTGTTAGCTCCCGAGCAATTCCTGAAATCTCCACAAAATTCATCAAAGCCTGTTGCAGTAGAAGCATCTGACAATAATAAAAGCCCAGAGAATTCCAATCAAACAGGATCTGCTGATTTGTTGATTACTAAATTGAATTCGATTTCGTTGTCAGCCAACCTTGATAAGGCATCCAAGGAAGTAGATTCAGCTGTCAATCAGACTAGAGGCTCACTCGAAAATTATGCTGATCAAGAAAAGAAGATATCAGAGTATGCAAGTGTCAAGGACAGCTCAGTTTCAGCCAAGGTTAGCGATGGAGCCAGCAGTATTGCCAAGACCAGCGGAAGTGCCAAGAATTTTGTTGAAAGTGGAAAGAGCAGTATGTGTAGAGGAAGCACAAGCAGTGACGTCAGTGATGAGAGCACTTGTAGCAGCTTTAGTACCAGCATCAGCAAGCCACACAAAGCAAATGACTTGAGATGGGAAGCCATACAAGCTGTCCGAGCAAGAGATGGGGTTCTGGGTTTAGGTCATTTCAGATTGCTAAAGAGGTTAGGCTGTGGGGATATTGGGAGTGTCTATCTGTCAGAGTTGAGTGGAACCAAATGTTATTTTGCAATGAAGGTTATGGATAAAGAATCTCTAGCAAGTCGTAAAAAGCTTCTTCGCGCTCAGACAGAAAGAGAGATACTACAATCTCTGGATCATCCCTTCCTTCCAACATTATACACCCACTTTGAGACAGATAAATTTTCATGCTTGGTAATGGAGTTCTGTCCTGGAGGAGACTTGCACACGCTTCGGCAGAGGCAGCCGGGAAAGCATTTTTCTGAGCAGGCAGTAAAATTCTATGTTGCAGAGGTCCTGCTATCTCTGGAATACCTCCACATGCTTGGAATTGTCTACCGTGACCTTAAGCCAGAAAATGTCCTGGTGAGGGAAGATGGACATATAATGCTCTCTGATTTTGACCTCTCACTCCGTTGTGCTGTTAGTCCAACTCTTGTCAACTCTTCAATGGAGTTTGAGCCCTTGCGAAAAAACCCTGTTTATTGTGTTCAGCCAGCTTGCATTGAGCCGCCTTCCTGCATCCAACCATCCTGTGTAGCTCCTACAACGTGCTTCTCACCGCGTCTGTTTTCTAGCAAGTCCAAAAAGGACAAAAAACCGAAGAACGAAATTGGTAACCAAGTACGACCATTACCTGAGCTCATGGCAGAGCCAACCGATGCCCGGTCTATGTCGTTTGTTGGGACTCATGAGTATTTGGCACCTGAGATTATTAAGGGTGAAGGTCATGGAAGTGCTGTTGATTGGTGGACTTTTGGAATCTTTCTGTATGAGCTGTTGTTTGGTAAGACTCCTTTCAAGGGTTCTGGGAATCGAGCAACATTGTTCAATGTTGTGGGTCAGCCCCTGCGGTTTCCAGAATCACCAGTAGTGAGTTTTGCTGCGAGAGATCTCATCAGGGGATTGCTTGTAAAGGAACCCCAGAACAGATTGGCATACAAACGAGGGGCAACTGAGATAAAACAACACCCCTTTTTTGAAGGCGTGAATTGGGCATTGATACGTTGTGCTACCCCACCTGAGATCCCAAAGCCTGTTGAGATTGAGCGGATGCCTGTGCCAATAATATCGTCGACTGAGAAGGAGAAGGCGCCTATCATCATGAAATCAGTTCCTGATCAAAAGGGTTCCGATAATTACCTAGAGTTTGATTTCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

612

Amino Acids

67.59

Weight (kDa)

8.4

Isoelectric Point (pI)

45.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	216 - 365	1.9e-36	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	216 - 365	2.2e-19	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	449 - 552	1.6e-20	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	456 - 539	6.3e-06	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26610 AT5G47750 AT5G55910 AT5G55910
fragaria_vesca	FvH4_3g00260 FvH4_3g42710 FvH4_3g42710 FvH4_3g42710 FvH4_3g42710 FvH4_3g42710 FvH4_3g42710
malus_domestica	MD03G1029500.v1.1 MD09G1025300.v1.1 MD10G1339900.v1.1 MD11G1032900.v1.1
prunus_persica	Prupe.4G002900_v2.0.a1 Prupe.4G002900_v2.0.a1 Prupe.6G025600_v2.0.a1 Prupe.6G025600_v2.0.a1 Prupe.6G025600_v2.0.a1 Prupe.6G025600_v2.0.a1 Prupe.6G025600_v2.0.a1
pyrus_communis	pycom03g02440 pycom10g28980 pycom11g02860
rosa_chinensis	RchiOBHm_Chr5g0000381 RchiOBHm_Chr5g0076451
rosa_laevigata	RLG00000030861 RLG00000030862 RLG00000036620
rosa_multiflora	Rmu_co8411395.1_g000001 Rmu_sc0000369.1_g000018 Rmu_sc0001680.1_g000004 Rmu_ssc0000181.1_g000002 Rmu_ssc0000385.1_g000014
rosa_roxburghii	Rroxscaffold_1G00075770 Rroxscaffold_1G00075780
rosa_rugosa	Rorug04G0383300 Rorug04G0383300 Rorug05G0447900 Rorug05G0448000 Rorug05G0448100
rosa_samantha	Rh5AG003200 Rh5AG502800 Rh5BG004200 Rh5BG524500 Rh5CG003400 Rh5CG548100 Rh5DG003100 Rh5DG003200 Rh5DG536300 Rh7BG161800
rosa_wichuraiana	Rw5G000310 Rw5G046640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	519
Acc36I	ACCTGC	1 cut(s)	22
AccB1I	GGYRCC	2 cut(s)	1378, 1768
AccBSI	CCGCTC	1 cut(s)	1726
AccI	GTMKAC	2 cut(s)	1011, 1751
AccII	CGCG	2 cut(s)	777, 1240
AciI	CCGC	5 cut(s)	450, 1187, 1238, 1528, 1726
AclWI	GGATC	3 cut(s)	241, 819, 1696
AcsI	RAATTY	6 cut(s)	163, 217, 262, 463, 857, 953
AcyI	GRCGYC	2 cut(s)	516, 1769
AfaI	GTAC	2 cut(s)	550, 1302
AfiI	CCNNNNNNNGG	4 cut(s)	292, 1045, 1341, 1478
AflII	CTTAAG	1 cut(s)	1022
AgsI	TTSAA	7 cut(s)	62, 262, 473, 1125, 1477, 1507, 1658
AjnI	CCWGG	2 cut(s)	886, 1038
Alw21I	GWGCWC	2 cut(s)	533, 1320
Alw26I	GTCTC	2 cut(s)	842, 888
AlwI	GGATC	3 cut(s)	241, 819, 1696
AlwNI	CAGNNNCTG	4 cut(s)	56, 236, 1525, 1793
Ama87I	CYCGRG	1 cut(s)	137
AoxI	GGCC	1 cut(s)	3
ApeKI	GCWGC	7 cut(s)	17, 40, 50, 53, 540, 919, 1559
ApoI	RAATTY	6 cut(s)	163, 217, 262, 463, 857, 953
AspLEI	GCGC	2 cut(s)	779, 1771
AspS9I	GGNCC	1 cut(s)	970
AsuC2I	CCSGG	2 cut(s)	924, 1342
AsuHPI	GGTGA	4 cut(s)	1054, 1227, 1409, 1533
AvaI	CYCGRG	1 cut(s)	137
AvaII	GGWCC	1 cut(s)	970
BanI	GGYRCC	2 cut(s)	1378, 1768
BanII	GRGCYC	2 cut(s)	1140, 1320
Bbv12I	GWGCWC	2 cut(s)	533, 1320
BbvI	GCAGC	7 cut(s)	4, 40, 52, 62, 552, 931, 1546
BccI	CCATC	5 cut(s)	416, 582, 614, 1046, 1213
BcgI	CGANNNNNNTGC	6 cut(s)	102, 136, 332, 366, 890, 924
BciT130I	CCWGG	2 cut(s)	888, 1040
BclI	TGATCA	2 cut(s)	355, 1795
BcnI	CCSGG	2 cut(s)	924, 1342
BcoDI	GTCTC	2 cut(s)	842, 888
BfaI	CTAG	4 cut(s)	330, 752, 1251, 1820
BfmI	CTRYAG	1 cut(s)	38
BfoI	RGCGCY	1 cut(s)	1772
BfrI	CTTAAG	1 cut(s)	1022
BfuAI	ACCTGC	1 cut(s)	22
BglII	AGATCT	1 cut(s)	1567
BisI	GCNGC	8 cut(s)	18, 41, 51, 54, 541, 920, 1187, 1560
BlsI	GCNGC	8 cut(s)	19, 42, 52, 55, 542, 921, 1188, 1561
Bme1390I	CCNGG	4 cut(s)	888, 924, 1040, 1342
Bme18I	GGWCC	1 cut(s)	970
BmeT110I	CYCGRG	1 cut(s)	137
BmgT120I	GGNCC	1 cut(s)	970
BmiI	GGNNCC	6 cut(s)	427, 709, 1380, 1596, 1770, 1807
BmrFI	CCNGG	4 cut(s)	888, 924, 1040, 1342
BmsI	GCATC	6 cut(s)	200, 305, 564, 1206, 1327, 1719
BplI	GAGNNNNNCTC	2 cut(s)	324, 356
BpmI	CTGGAG	2 cut(s)	16, 909
Bpu10I	CCTNAGC	1 cut(s)	1314
BpuEI	CTTGAG	1 cut(s)	604
BpuMI	CCSGG	2 cut(s)	924, 1342
BsaHI	GRCGYC	2 cut(s)	516, 1769
BsaJI	CCNNGG	2 cut(s)	300, 411
Bsc4I	CCNNNNNNNGG	4 cut(s)	292, 1045, 1341, 1478
Bse1I	ACTGG	1 cut(s)	1544
Bse3DI	GCAATG	1 cut(s)	732
BseBI	CCWGG	2 cut(s)	888, 1040
BseDI	CCNNGG	2 cut(s)	300, 411
BseGI	GGATG	5 cut(s)	296, 814, 1197, 1205, 1734
BseLI	CCNNNNNNNGG	4 cut(s)	292, 1045, 1341, 1478
BseMI	GCAATG	1 cut(s)	732
BseMII	CTCAG	9 cut(s)	97, 414, 794, 930, 1305, 1374, 1623, 1689, 1746
BseNI	ACTGG	1 cut(s)	1544
BseRI	GAGGAG	1 cut(s)	906
BseXI	GCAGC	7 cut(s)	4, 40, 52, 62, 552, 931, 1546
Bsh1236I	CGCG	2 cut(s)	777, 1240
BshFI	GGCC	1 cut(s)	5
BshNI	GGYRCC	2 cut(s)	1378, 1768
BsiHKAI	GWGCWC	2 cut(s)	533, 1320
BsiHKCI	CYCGRG	1 cut(s)	137
BsiSI	CCGG	2 cut(s)	923, 1342
BslFI	GGGAC	1 cut(s)	1375
BslI	CCNNNNNNNGG	4 cut(s)	292, 1045, 1341, 1478
BsmAI	GTCTC	2 cut(s)	842, 888
BsmFI	GGGAC	1 cut(s)	1375
BsnI	GGCC	1 cut(s)	5
BsoBI	CYCGRG	1 cut(s)	137
Bsp1286I	GDGCHC	3 cut(s)	533, 1140, 1320
Bsp143I	GATC	7 cut(s)	79, 233, 355, 811, 1567, 1701, 1795
BspACI	CCGC	5 cut(s)	450, 1187, 1238, 1528, 1726
BspANI	GGCC	1 cut(s)	5
BspCNI	CTCAG	9 cut(s)	96, 413, 793, 931, 1306, 1375, 1624, 1690, 1747
BspFNI	CGCG	2 cut(s)	777, 1240
BspHI	TCATGA	2 cut(s)	1366, 1779
BspLI	GGNNCC	6 cut(s)	427, 709, 1380, 1596, 1770, 1807
BspMAI	CTGCAG	1 cut(s)	42
BspMI	ACCTGC	1 cut(s)	22
BspPI	GGATC	3 cut(s)	241, 819, 1696
BspT107I	GGYRCC	2 cut(s)	1378, 1768
BspTI	CTTAAG	1 cut(s)	1022
BsrBI	CCGCTC	1 cut(s)	1726
BsrDI	GCAATG	1 cut(s)	732
BsrI	ACTGG	1 cut(s)	1544
BssECI	CCNNGG	2 cut(s)	300, 411
BssMI	GATC	7 cut(s)	79, 233, 355, 811, 1567, 1701, 1795
BssNI	GRCGYC	2 cut(s)	516, 1769
BssT1I	CCWWGG	2 cut(s)	300, 411
Bst2UI	CCWGG	2 cut(s)	888, 1040
Bst4CI	ACNGT	2 cut(s)	67, 1016
Bst6I	CTCTTC	1 cut(s)	1126
BstACI	GRCGYC	2 cut(s)	516, 1769
BstAFI	CTTAAG	1 cut(s)	1022
BstC8I	GCNNGC	5 cut(s)	430, 563, 945, 1173, 1177
BstDEI	CTNAG	9 cut(s)	83, 400, 780, 939, 1314, 1383, 1632, 1698, 1755
BstEII	GGTNACC	1 cut(s)	1292
BstENI	CCTNNNNNAGG	1 cut(s)	290
BstF5I	GGATG	5 cut(s)	296, 814, 1197, 1205, 1734
BstFNI	CGCG	2 cut(s)	777, 1240
BstH2I	RGCGCY	1 cut(s)	1772
BstHHI	GCGC	2 cut(s)	779, 1771
BstKTI	GATC	7 cut(s)	82, 236, 358, 814, 1570, 1704, 1798
BstMAI	GTCTC	2 cut(s)	842, 888
BstMBI	GATC	7 cut(s)	79, 233, 355, 811, 1567, 1701, 1795
BstMWI	GCNNNNNNNGC	7 cut(s)	23, 188, 537, 602, 611, 919, 928
BstNI	CCWGG	2 cut(s)	888, 1040
BstNSI	RCATGY	1 cut(s)	1000
BstPI	GGTNACC	1 cut(s)	1292
BstSCI	CCNGG	4 cut(s)	886, 922, 1038, 1340
BstSFI	CTRYAG	1 cut(s)	38
BstUI	CGCG	2 cut(s)	777, 1240
BstV1I	GCAGC	7 cut(s)	4, 40, 52, 62, 552, 931, 1546
BstX2I	RGATCY	3 cut(s)	233, 1567, 1701
BstXI	CCANNNNNNTGG	1 cut(s)	1001
BstYI	RGATCY	3 cut(s)	233, 1567, 1701
BsuRI	GGCC	1 cut(s)	5
BtgZI	GCGATG	1 cut(s)	435
BtsCI	GGATG	5 cut(s)	296, 814, 1197, 1205, 1734
BtsI	GCAGTG	1 cut(s)	517
BtsIMutI	CAGTG	2 cut(s)	517, 526
BveI	ACCTGC	1 cut(s)	22
Cac8I	GCNNGC	5 cut(s)	430, 563, 945, 1173, 1177
CaiI	CAGNNNCTG	4 cut(s)	56, 236, 1525, 1793
CciI	TCATGA	2 cut(s)	1366, 1779
CfoI	GCGC	2 cut(s)	779, 1771
Cfr13I	GGNCC	1 cut(s)	970
CseI	GACGC	2 cut(s)	15, 1229
Csp6I	GTAC	2 cut(s)	549, 1301
CviAII	CATG	6 cut(s)	864, 997, 1321, 1367, 1406, 1780
CviQI	GTAC	2 cut(s)	549, 1301
DdeI	CTNAG	9 cut(s)	83, 400, 780, 939, 1314, 1383, 1632, 1698, 1755
DinI	GGCGCC	1 cut(s)	1770
DpnI	GATC	7 cut(s)	81, 235, 357, 813, 1569, 1703, 1797
DpnII	GATC	7 cut(s)	79, 233, 355, 811, 1567, 1701, 1795
Eam1104I	CTCTTC	1 cut(s)	1126
EarI	CTCTTC	1 cut(s)	1126
Ecl136II	GAGCTC	1 cut(s)	1318
Eco130I	CCWWGG	2 cut(s)	300, 411
Eco24I	GRGCYC	2 cut(s)	1140, 1320
Eco32I	GATATC	1 cut(s)	372
Eco47I	GGWCC	1 cut(s)	970
Eco53kI	GAGCTC	1 cut(s)	1318
Eco88I	CYCGRG	1 cut(s)	137
Eco91I	GGTNACC	1 cut(s)	1292
EcoICRI	GAGCTC	1 cut(s)	1318
EcoNI	CCTNNNNNAGG	1 cut(s)	290
EcoO109I	RGGNCCY	1 cut(s)	970
EcoO65I	GGTNACC	1 cut(s)	1292
EcoRI	GAATTC	2 cut(s)	217, 262
EcoRII	CCWGG	2 cut(s)	886, 1038
EcoRV	GATATC	1 cut(s)	372
EcoT14I	CCWWGG	2 cut(s)	300, 411
EcoT38I	GRGCYC	2 cut(s)	1140, 1320
EgeI	GGCGCC	1 cut(s)	1770
EheI	GGCGCC	1 cut(s)	1770
ErhI	CCWWGG	2 cut(s)	300, 411
FaeI	CATG	6 cut(s)	867, 1000, 1324, 1370, 1409, 1783
FaqI	GGGAC	1 cut(s)	1375
FatI	CATG	6 cut(s)	863, 996, 1320, 1366, 1405, 1779
FbaI	TGATCA	2 cut(s)	355, 1795
FblI	GTMKAC	2 cut(s)	1011, 1751
Fnu4HI	GCNGC	8 cut(s)	18, 41, 51, 54, 541, 920, 1187, 1560
FokI	GGATG	5 cut(s)	283, 801, 1184, 1192, 1741
FriOI	GRGCYC	2 cut(s)	1140, 1320
Fsp4HI	GCNGC	8 cut(s)	18, 41, 51, 54, 541, 920, 1187, 1560
FspBI	CTAG	4 cut(s)	330, 752, 1251, 1820
GlaI	GCGC	2 cut(s)	778, 1770
GluI	GCNGC	8 cut(s)	18, 41, 51, 54, 541, 920, 1187, 1560
GsuI	CTGGAG	2 cut(s)	16, 909
HaeII	RGCGCY	1 cut(s)	1772
HaeIII	GGCC	1 cut(s)	5
HapII	CCGG	2 cut(s)	923, 1342
HgaI	GACGC	2 cut(s)	15, 1229
HhaI	GCGC	2 cut(s)	779, 1771
Hin1I	GRCGYC	2 cut(s)	516, 1769
Hin1II	CATG	6 cut(s)	867, 1000, 1324, 1370, 1409, 1783
Hin6I	GCGC	2 cut(s)	777, 1769
HinP1I	GCGC	2 cut(s)	777, 1769
HincII	GTYRAC	2 cut(s)	1117, 1752
HindII	GTYRAC	2 cut(s)	1117, 1752
HindIII	AAGCTT	1 cut(s)	767
HinfI	GANTC	8 cut(s)	71, 311, 746, 1363, 1437, 1468, 1489, 1538
HpaII	CCGG	2 cut(s)	923, 1342
HphI	GGTGA	4 cut(s)	1054, 1227, 1409, 1533
Hpy166II	GTNNAC	4 cut(s)	1012, 1117, 1428, 1752
Hpy8I	GTNNAC	4 cut(s)	1012, 1117, 1428, 1752
Hpy99I	CGWCG	1 cut(s)	1753
HpyAV	CCTTC	8 cut(s)	724, 829, 833, 1200, 1394, 1652, 1753, 1759
HpyCH4III	ACNGT	2 cut(s)	67, 1016
HpyCH4IV	ACGT	3 cut(s)	516, 1226, 1681
HpyCH4V	TGCA	8 cut(s)	40, 182, 383, 725, 901, 965, 1179, 1197
HpyF10VI	GCNNNNNNNGC	7 cut(s)	23, 188, 537, 602, 611, 919, 928
HpyF3I	CTNAG	9 cut(s)	83, 400, 780, 939, 1314, 1383, 1632, 1698, 1755
HpySE526I	ACGT	3 cut(s)	516, 1226, 1681
Hsp92I	GRCGYC	2 cut(s)	516, 1769
Hsp92II	CATG	6 cut(s)	867, 1000, 1324, 1370, 1409, 1783
HspAI	GCGC	2 cut(s)	777, 1769
KasI	GGCGCC	1 cut(s)	1768
Ksp22I	TGATCA	2 cut(s)	355, 1795
Kzo9I	GATC	7 cut(s)	79, 233, 355, 811, 1567, 1701, 1795
LmnI	GCTCC	4 cut(s)	124, 139, 425, 1222
Lsp1109I	GCAGC	7 cut(s)	4, 40, 52, 62, 552, 931, 1546
LweI	GCATC	6 cut(s)	200, 305, 564, 1206, 1327, 1719
MaeI	CTAG	4 cut(s)	330, 752, 1251, 1820
MaeII	ACGT	3 cut(s)	516, 1226, 1681
MaeIII	GTNAC	3 cut(s)	512, 1016, 1292
MalI	GATC	7 cut(s)	81, 235, 357, 813, 1569, 1703, 1797
MbiI	CCGCTC	1 cut(s)	1726
MboI	GATC	7 cut(s)	79, 233, 355, 811, 1567, 1701, 1795
MboII	GAAGA	5 cut(s)	379, 764, 1061, 1113, 1291
MflI	RGATCY	3 cut(s)	233, 1567, 1701
MhlI	GDGCHC	3 cut(s)	533, 1140, 1320
Mly113I	GGCGCC	1 cut(s)	1769
MlyI	GAGTC	2 cut(s)	1357, 1462
MmeI	TCCRAC	3 cut(s)	851, 1130, 1225
MseI	TTAA	2 cut(s)	1023, 1392
MslI	CAYNNNNRTG	1 cut(s)	1410
MspA1I	CMGCKG	3 cut(s)	53, 317, 450
MspCI	CTTAAG	1 cut(s)	1022
MspI	CCGG	2 cut(s)	923, 1342
MspR9I	CCNGG	4 cut(s)	888, 924, 1040, 1342
MvaI	CCWGG	2 cut(s)	888, 1040
MvnI	CGCG	2 cut(s)	777, 1240
MwoI	GCNNNNNNNGC	7 cut(s)	23, 188, 537, 602, 611, 919, 928
NarI	GGCGCC	1 cut(s)	1769
NciI	CCSGG	2 cut(s)	924, 1342
NdeII	GATC	7 cut(s)	79, 233, 355, 811, 1567, 1701, 1795
NlaIII	CATG	6 cut(s)	867, 1000, 1324, 1370, 1409, 1783
NlaIV	GGNNCC	6 cut(s)	427, 709, 1380, 1596, 1770, 1807
NmuCI	GTSAC	2 cut(s)	512, 1016
NspI	RCATGY	1 cut(s)	1000
PagI	TCATGA	2 cut(s)	1366, 1779
PfeI	GAWTC	6 cut(s)	71, 311, 746, 1437, 1489, 1538
PfoI	TCCNGGA	1 cut(s)	886
PkrI	GCNGC	8 cut(s)	19, 42, 52, 55, 542, 921, 1188, 1561
PleI	GAGTC	2 cut(s)	1357, 1462
PluTI	GGCGCC	1 cut(s)	1772
PpsI	GAGTC	2 cut(s)	1357, 1462
PpuMI	RGGWCCY	1 cut(s)	970
Psp124BI	GAGCTC	1 cut(s)	1320
Psp5II	RGGWCCY	1 cut(s)	970
Psp6I	CCWGG	2 cut(s)	886, 1038
PspEI	GGTNACC	1 cut(s)	1292
PspGI	CCWGG	2 cut(s)	886, 1038
PspN4I	GGNNCC	6 cut(s)	427, 709, 1380, 1596, 1770, 1807
PspPI	GGNCC	1 cut(s)	970
PspPPI	RGGWCCY	1 cut(s)	970
PstI	CTGCAG	1 cut(s)	42
PstNI	CAGNNNCTG	4 cut(s)	56, 236, 1525, 1793
PsuI	RGATCY	3 cut(s)	233, 1567, 1701
PvuII	CAGCTG	2 cut(s)	53, 317
RsaI	GTAC	2 cut(s)	550, 1302
RsaNI	GTAC	2 cut(s)	549, 1301
RseI	CAYNNNNRTG	1 cut(s)	1410
SacI	GAGCTC	1 cut(s)	1320
SalI	GTCGAC	1 cut(s)	1750
SaqAI	TTAA	2 cut(s)	1023, 1392
SatI	GCNGC	8 cut(s)	18, 41, 51, 54, 541, 920, 1187, 1560
Sau3AI	GATC	7 cut(s)	79, 233, 355, 811, 1567, 1701, 1795
Sau96I	GGNCC	1 cut(s)	970
SchI	GAGTC	2 cut(s)	1357, 1462
ScrFI	CCNGG	4 cut(s)	888, 924, 1040, 1342
SduI	GDGCHC	3 cut(s)	533, 1140, 1320
SfaNI	GCATC	6 cut(s)	200, 305, 564, 1206, 1327, 1719
SfcI	CTRYAG	1 cut(s)	38
SfoI	GGCGCC	1 cut(s)	1770
SinI	GGWCC	1 cut(s)	970
SmiMI	CAYNNNNRTG	1 cut(s)	1410
SmlI	CTYRAG	2 cut(s)	583, 1022
SmoI	CTYRAG	2 cut(s)	583, 1022
SsiI	CCGC	5 cut(s)	450, 1187, 1238, 1528, 1726
SspDI	GGCGCC	1 cut(s)	1768
SspMI	CTAG	4 cut(s)	330, 752, 1251, 1820
SstI	GAGCTC	1 cut(s)	1320
StyD4I	CCNGG	4 cut(s)	886, 922, 1038, 1340
StyI	CCWWGG	2 cut(s)	300, 411
TaaI	ACNGT	2 cut(s)	67, 1016
TaiI	ACGT	3 cut(s)	519, 1229, 1684
TaqI	TCGA	4 cut(s)	266, 342, 1492, 1751
TauI	GCSGC	1 cut(s)	1189
TfiI	GAWTC	6 cut(s)	71, 311, 746, 1437, 1489, 1538
Tru1I	TTAA	2 cut(s)	1023, 1392
Tru9I	TTAA	2 cut(s)	1023, 1392
TscAI	CASTG	2 cut(s)	517, 526
TseFI	GTSAC	2 cut(s)	512, 1016
TseI	GCWGC	7 cut(s)	17, 40, 50, 53, 540, 919, 1559
Tsp45I	GTSAC	2 cut(s)	512, 1016
TspDTI	ATGAA	5 cut(s)	122, 156, 743, 852, 1796
TspGWI	ACGGA	1 cut(s)	1079
TspRI	CASTG	2 cut(s)	517, 526
Vha464I	CTTAAG	1 cut(s)	1022
VpaK11BI	GGWCC	1 cut(s)	970
XagI	CCTNNNNNAGG	1 cut(s)	290
XapI	RAATTY	6 cut(s)	163, 217, 262, 463, 857, 953
XceI	RCATGY	1 cut(s)	1000
XmiI	GTMKAC	2 cut(s)	1011, 1751
XspI	CTAG	4 cut(s)	330, 752, 1251, 1820
ZraI	GACGTC	1 cut(s)	517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.