Rh7BG161800

Protein kinase PVPK-1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0001306
Physical Location & Seq
Reverse (-)
12490557 .. 12493209
2653 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG161800.1

Sequence Viewer

Length: 285 bp
ATGATGAATAATGCTCAAGCACCACAAAATGGTTTCAAGCCAACATCATTCACCGGCATGAATCAAATGTCAGTTAATAACCCACATCAGTCTACATATGGTTTCATGGCTCAAAATGGTGCTGCATACGCTCATTTGACAACTGGGACTTCTCGTCCCTCTCAGCCTCCATCTCCGAAACAATTGAGAAGTGAAGTGGCTTCATCCACATCTAGTGTGGCAGCTCATGGTTATGAAGTAAAGACATACGTCCTTAAATTTAAACGCAAAGATAGTAAAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

94

Amino Acids

10.18

Weight (kDa)

10.07

Isoelectric Point (pI)

48.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 29
AccI GTMKAC 1 cut(s) 92
AcsI RAATTY 1 cut(s) 257
AfiI CCNNNNNNNGG 1 cut(s) 29
AgsI TTSAA 1 cut(s) 37
AhdI GACNNNNNGTC 1 cut(s) 153
AluBI AGCT 2 cut(s) 224, 281
AluI AGCT 2 cut(s) 224, 281
ApeKI GCWGC 2 cut(s) 122, 221
ApoI RAATTY 1 cut(s) 257
AsuHPI GGTGA 1 cut(s) 43
BbvI GCAGC 2 cut(s) 109, 233
BccI CCATC 1 cut(s) 178
BfaI CTAG 1 cut(s) 213
BisI GCNGC 2 cut(s) 123, 222
BlsI GCNGC 2 cut(s) 124, 223
BmeRI GACNNNNNGTC 1 cut(s) 153
BmrI ACTGGG 1 cut(s) 153
BmuI ACTGGG 1 cut(s) 153
BoxI GACNNNNGTC 1 cut(s) 248
Bsc4I CCNNNNNNNGG 1 cut(s) 29
Bse118I RCCGGY 1 cut(s) 53
Bse1I ACTGG 1 cut(s) 148
BseGI GGATG 1 cut(s) 203
BseLI CCNNNNNNNGG 1 cut(s) 29
BseMII CTCAG 1 cut(s) 176
BseNI ACTGG 1 cut(s) 148
BseXI GCAGC 2 cut(s) 109, 233
BsiSI CCGG 1 cut(s) 54
BslFI GGGAC 2 cut(s) 141, 160
BslI CCNNNNNNNGG 1 cut(s) 29
BsmFI GGGAC 2 cut(s) 141, 160
BspCNI CTCAG 1 cut(s) 175
BsrFI RCCGGY 1 cut(s) 53
BsrI ACTGG 1 cut(s) 148
BssAI RCCGGY 1 cut(s) 53
BstDEI CTNAG 1 cut(s) 162
BstF5I GGATG 1 cut(s) 203
BstMWI GCNNNNNNNGC 1 cut(s) 128
BstPAI GACNNNNGTC 1 cut(s) 248
BstV1I GCAGC 2 cut(s) 109, 233
BtsCI GGATG 1 cut(s) 203
Cfr10I RCCGGY 1 cut(s) 53
CviAII CATG 3 cut(s) 58, 106, 227
CviJI RGCY 6 cut(s) 40, 110, 166, 200, 224, 281
CviKI_1 RGCY 6 cut(s) 40, 110, 166, 200, 224, 281
DdeI CTNAG 1 cut(s) 162
DraI TTTAAA 1 cut(s) 262
DriI GACNNNNNGTC 1 cut(s) 153
Eam1105I GACNNNNNGTC 1 cut(s) 153
FaeI CATG 3 cut(s) 61, 109, 230
FaiI YATR 8 cut(s) 59, 97, 99, 107, 127, 228, 234, 247
FaqI GGGAC 2 cut(s) 141, 160
FatI CATG 3 cut(s) 57, 105, 226
FauNDI CATATG 1 cut(s) 97
FblI GTMKAC 1 cut(s) 92
Fnu4HI GCNGC 2 cut(s) 123, 222
FokI GGATG 1 cut(s) 190
Fsp4HI GCNGC 2 cut(s) 123, 222
FspBI CTAG 1 cut(s) 213
GluI GCNGC 2 cut(s) 123, 222
HapII CCGG 1 cut(s) 54
Hin1II CATG 3 cut(s) 61, 109, 230
HindIII AAGCTT 1 cut(s) 279
HinfI GANTC 1 cut(s) 61
HpaII CCGG 1 cut(s) 54
HphI GGTGA 1 cut(s) 43
Hpy166II GTNNAC 1 cut(s) 93
Hpy188I TCNGA 1 cut(s) 177
Hpy8I GTNNAC 1 cut(s) 93
HpyCH4IV ACGT 1 cut(s) 249
HpyCH4V TGCA 1 cut(s) 125
HpyF10VI GCNNNNNNNGC 1 cut(s) 128
HpyF3I CTNAG 1 cut(s) 162
HpySE526I ACGT 1 cut(s) 249
Hsp92II CATG 3 cut(s) 61, 109, 230
LpnPI CCDG 2 cut(s) 67, 129
Lsp1109I GCAGC 2 cut(s) 109, 233
MaeI CTAG 1 cut(s) 213
MaeII ACGT 1 cut(s) 249
MfeI CAATTG 1 cut(s) 182
MluCI AATT 2 cut(s) 182, 257
MnlI CCTC 2 cut(s) 169, 177
MseI TTAA 3 cut(s) 75, 255, 261
MslI CAYNNNNRTG 2 cut(s) 56, 231
MspI CCGG 1 cut(s) 54
MunI CAATTG 1 cut(s) 182
MwoI GCNNNNNNNGC 1 cut(s) 128
NdeI CATATG 1 cut(s) 97
NlaIII CATG 3 cut(s) 61, 109, 230
PfeI GAWTC 1 cut(s) 61
PflMI CCANNNNNTGG 1 cut(s) 29
PkrI GCNGC 2 cut(s) 124, 223
PshAI GACNNNNGTC 1 cut(s) 248
RseI CAYNNNNRTG 2 cut(s) 56, 231
SaqAI TTAA 3 cut(s) 75, 255, 261
SatI GCNGC 2 cut(s) 123, 222
SetI ASST 3 cut(s) 226, 252, 283
SgeI CNNG 9 cut(s) 29, 49, 66, 70, 118, 156, 165, 225, 239
SmiMI CAYNNNNRTG 2 cut(s) 56, 231
SmlI CTYRAG 1 cut(s) 15
SmoI CTYRAG 1 cut(s) 15
Sse9I AATT 2 cut(s) 182, 257
SspMI CTAG 1 cut(s) 213
TaiI ACGT 1 cut(s) 252
TasI AATT 2 cut(s) 182, 257
TfiI GAWTC 1 cut(s) 61
Tru1I TTAA 3 cut(s) 75, 255, 261
Tru9I TTAA 3 cut(s) 75, 255, 261
TseI GCWGC 2 cut(s) 122, 221
TspDTI ATGAA 5 cut(s) 20, 74, 94, 192, 249
Van91I CCANNNNNTGG 1 cut(s) 29
XapI RAATTY 1 cut(s) 257
XcmI CCANNNNNNNNNTGG 1 cut(s) 214
XmiI GTMKAC 1 cut(s) 92
XspI CTAG 1 cut(s) 213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.