Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003625

Physical Location & Seq

Genomic Coordinates Reverse (-)

24714076 .. 24721970

Gene Structure 7895 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G61460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3174 bp

ATGGTAAAATCTGGTGCTCGAGCCAGTGATTCATTCATCAAACAACGTTCTGGGTCGGGTTCGATTCTGAGGATCAAAGTTGAGAATTTCATGTGCCATAGTAATCTCCAGATTGAGTTTGGCGAGTGGGTTAATTTCATCACCGGCCAAAACGGAAGTGGTAAGAGTGCAATACTGACTGCACTATGTGTTGCATTTGGATGTCGAGCGAGAGGGACTCAGCGTGCTGCCACTCTAAAGGATTTCATTAAAACTGGATGCAGCTATGCCGTTGTCCAAGTAGAAATGAAAAACAGTGGAGAGGATGCTTTTAAGCCTGAAATTTATGGTGGCGTTATAATTATCGAACGCAGGATAACTGAGTCTGCTACAGCTACTGTTCTCAAAGATTATCTAGGAAAAAAAGTAAGTAACAAAAGGGACGAGCTACGGGAACTTGTTGAACATTTTAATATTGATGTTGAAAATCCGTGTGTGGTAATGAGTCAAGACAAAAGCAGGGAGTTCTTACATTCTGGAAATGACAAAGATAAATTCAAGTTCTTTTTTAAGGCAACCCTTCTTCAGCAAGTCAATGATCTTCTCCAAAGTATCTACGAACACTTGACAAAAGCAACTGCTATAGTCGATGAATTGGAGAACACAATTAAACCAATAGAAAAGGAGATCAGTGAGTTGCGTGGAAAGATAAAGAATATGGAACAAGTTGAAGAAATAGCTCAAAGGTTGCAGCAGTTGAAGAAGAAACTGGCTTGGTCATGGGTATATGATGTGGATAGGCAGCTCCAGGAACAGACTGAGAAGATTGTGAAGCTTAAAGAACGTATACCGACTTGCCAAGCTAAAATAGATTGGGAACTGGGAAAAGTGGAATCATTAAGGGATACGTTGACCAAGAAGAAAGCTCAAGTTGCGTGTCTGATGGATGAATCAACTGCAATGAAGAGAGAGATAGAGAGTTTTCACCAATCAGCCAAGACGGCTGTACGAGAAAAAATTGCTCTACAAGAAGAATTCAATCATAAGTGCAATTATGTTCAAAAGATTAAGGATCGTGTTAGAAGGCTTGAACGGCAAGTTGGAGATATCAATGAACAGACAATGAAGAACACACAGGCTGAACAATCTGAAATCGAGGAGAAACTAAAATATTTGGAGCAGGAGGTTGAGAAAGTTGAAACATTGCGTTCCAGATTGAAAGAGGAAGAGAACTGCTTCTTGGAAAAAGCGTTTGAAGGGAGGAAAAAGATGGAACACATCGAGGATATGATTAAAAACCATCAAAAGAGGCAAAGATTCATAACCTCGAACATTAATGATCTGAAGAAACATCAAACAAATAAGGTTACTGCATTTGGAGGGGACAGAGTCATTAATCTTCTGCAGGCTATTGAGAGAAATCATCGTAGATTTAGAAAACCACCAATTGGTCCTATTGGCTCCCATGTGACTTTAGTCAATGGCAATAAATGGGCTTCTTCAGTTGAACAAGCTCTTGGAACCCTATTAAATGCCTTCATTGTGACTGATCACAAAGATTCTCTCACTCTAAGAGGCTGTGCGAATGAAGCTAACTATAGAAATCTTAAGATTATCATCTATGACTTTTCGAGACCAAGGTTAAATATACCAAGGCACATGGTGCCTCAGACAGAACACCCAACTATATTCTCTGTCATAGACTCTGATAACCCAACCGTCCTTAATGTCTTGGTGGATCAGAGTGGTGTTGAGAGGCAAGTGCTTGCAGAAAATTATGAGGAGGGAAAGGCGGTTGCATTTGGGAAAAGGCTCTCAAATCTGAAGGAGGTTTACACTTTAGACGGATACAAAATGTTTTTTCGTGGGCCAGTTCAGACTACTCTTCCTCCTCTTTCTCGTAGACCTTCGCGACTCTGTGCTTCTTTTGATGACCAGATCAAGGATCTTGAAATAGAGGCTTCAAAAGAACAAAACGAGATAAATCAATGCATGAGACGTAAGAGGGAGGCAGAGGAGAATCTTGAGGAACTTGAGTTGAAAGTGCGCCAACTGAAGAAGCACCGCAGCCAAGCAGAGAAGGTTTTGACGACAAAGGAACTTGAGATGCACGATTTGAAGAATACAGTCGCTGCTGAGATCGAAGCATTACCTTCTTCAAGTGTTAATGAGCTTCAACGTGAAATCATGAAAGACCTAGAAGAGATAGATGAGAAAGAAGCTTTCCTTGAGAAGCTCCAAAACTGCTTGAAAGAAGCTGAGCTAAAGGCTAATAAACTTACAGCTTTATTTGAGAACATGCGTGAGTCAGCCAAGGGTGAAATTGATGCCTTTGAGGAAGCAGAGAATGAGCTAAAGAAGATTGAGAAAGACCTTCAGTCTGCCGAAGCGGAGAAAATCCATTACGAGAACATAATGAAAAACAAGGTCCTACCTGATATTAAGAATGCTGAGGCTAACTACGAGGAGCTTAAAAATAAGCGAAAGGAAAGTGACCAGAAGGCCTCTGAAATTTGTCCTGAGAGTGAGATAGAATCTTTGGGTCCCTGGGATGGGAGTACTCCTGAGCAACTCAGTGCTCAGATTACCAGAATGAATCAGAGACTTCATCGAGAGAATCAGCAGTTTTCTGAATCAATTGATGACCTTAGGATGATGTATGAGAGCCTAGAACGAAAGATTGCAAAGAAGCGCAAATCCTATCAAGACCATCGAGAAAAACTCATGGCCTGCAAAAATGCTCTAGATTCACGGTGGGCCAAATTTCAAAGAAATGCATCTCTTCTTCGGCGCCAGTTAACATGGCAATTCAACGCTCACTTGGGAAAGAAAGGTATCAGCGGACACATCAAAGTCAGTTATGAAAATAAAACTTTGTCCATAGAGGTTAAAATGCCTCAAGACGCAACAAGCAATGTCGTTCGAGACACCAAAGGTCTTTCAGGCGGAGAACGTTCTTTCTCAACTTTATGTTTTGCACTAGCTCTTCACGAGATGACAGAAGCCCCGTTTCGAGCAATGGATGAGTTTGATGTGTTTATGGATGCAGTCAGTCGGAAAATTAGCTTGGACGCACTGGTGGATTTTGCAATTGGAGAAGGATCGCAGTGGATGTTCATCACCCCTCATGATATCAGCATGGTGAAGTCGCACGAGAGGATAAAGAAACAGCAAATGGCTGCTCCTCGTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0000819 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009987 GO:0010165 GO:0010212 GO:0016043 GO:0022402 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_23 SMC_N

Protein Analysis

1057

Amino Acids

121.78

Weight (kDa)

8.22

Isoelectric Point (pI)

48.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SMC_N	PF02463	22 - 1047	1.3e-20	RecF/RecN/SMC N terminal domain
AAA_23	PF13476	24 - 251	8.7e-21	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003625)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07660 AT5G61460
fragaria_vesca	FvH4_7g27291 FvH4_7g27291 FvH4_7g27291 FvH4_7g27291 FvH4_7g27291 FvH4_7g27291 FvH4_7g27291 FvH4_7g27291 FvH4_7g27291
malus_domestica	MD07G1252300.v1.1
prunus_persica	Prupe.2G275800_v2.0.a1 Prupe.2G275800_v2.0.a1 Prupe.2G275800_v2.0.a1
pyrus_communis	pycom07g22470
rosa_chinensis	RchiOBHm_Chr1g0342881 RchiOBHm_Chr1g0374131 RchiOBHm_Chr4g0408871 RchiOBHm_Chr7g0243831
rosa_laevigata	RLG00000026760
rosa_multiflora	Rmu_sc0008430.1_g000005 Rmu_sc0020614.1_g000004 Rmu_sc0028209.1_g000001 Rmu_sc0039486.1_g000001 Rmu_ssc0000450.1_g000001
rosa_roxburghii	Rroxscaffold_4G00283700 Rroxscaffold_5G00354810
rosa_rugosa	Rorug01G0380900.1
rosa_samantha	Rh1AG391800 Rh1BG355900 Rh1DG386500 Rh4DG145500 Rh4DG209300
rosa_wichuraiana	Rw1G034380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	338
AccB1I	GGYRCC	2 cut(s)	1642, 2769
AccB7I	CCANNNNNTGG	1 cut(s)	1427
AccI	GTMKAC	2 cut(s)	826, 1882
AccII	CGCG	1 cut(s)	1891
AciI	CCGC	5 cut(s)	1772, 2044, 2369, 2820, 2925
AclI	AACGTT	2 cut(s)	46, 2932
AclWI	GGATC	5 cut(s)	80, 1059, 1725, 1932, 3088
AcoI	YGGCCR	1 cut(s)	145
AcsI	RAATTY	6 cut(s)	85, 321, 533, 1013, 2490, 2741
AcuI	CTGAAG	6 cut(s)	548, 1343, 1464, 1823, 2054, 2339
AcyI	GRCGYC	1 cut(s)	2770
AdeI	CACNNNGTG	2 cut(s)	188, 1642
AfaI	GTAC	2 cut(s)	987, 2539
AfiI	CCNNNNNNNGG	4 cut(s)	1427, 1921, 2531, 2532
AflII	CTTAAG	1 cut(s)	1586
AhdI	GACNNNNNGTC	1 cut(s)	2356
AjnI	CCWGG	2 cut(s)	786, 2525
AjuI	GAANNNNNNNTTGG	8 cut(s)	1062, 1094, 1202, 1234, 1479, 1511, 3029, 3061
Alw21I	GWGCWC	2 cut(s)	19, 2560
Alw26I	GTCTC	4 cut(s)	1606, 1969, 2575, 2898
AlwI	GGATC	5 cut(s)	80, 1059, 1725, 1932, 3088
AlwNI	CAGNNNCTG	2 cut(s)	377, 2111
Ama87I	CYCGRG	1 cut(s)	18
AoxI	GGCC	5 cut(s)	145, 1847, 2481, 2706, 2736
ApeKI	GCWGC	7 cut(s)	227, 261, 730, 781, 2046, 2111, 3158
ApoI	RAATTY	6 cut(s)	85, 321, 533, 1013, 2490, 2741
AseI	ATTAAT	2 cut(s)	1314, 1374
Asp700I	GAANNNNTTC	1 cut(s)	1214
AspLEI	GCGC	3 cut(s)	2028, 2673, 2772
AspS9I	GGNCC	5 cut(s)	1430, 1847, 2407, 2522, 2736
AsuHPI	GGTGA	5 cut(s)	133, 956, 2309, 3091, 3133
AvaI	CYCGRG	1 cut(s)	18
AvaII	GGWCC	3 cut(s)	1430, 2407, 2522
AxyI	CCTNAGG	1 cut(s)	2627
BanI	GGYRCC	2 cut(s)	1642, 2769
BarI	GAAGNNNNNNTAC	2 cut(s)	1796, 1828
BauI	CACGAG	2 cut(s)	2969, 3131
Bbv12I	GWGCWC	2 cut(s)	19, 2560
BbvCI	CCTCAGC	1 cut(s)	2430
BbvI	GCAGC	7 cut(s)	214, 273, 742, 793, 2058, 2098, 3145
BccI	CCATC	5 cut(s)	916, 1243, 1287, 2525, 2697
BceAI	ACGGC	3 cut(s)	254, 996, 1088
BciT130I	CCWGG	2 cut(s)	788, 2527
BciVI	GTATCC	2 cut(s)	877, 1820
BclI	TGATCA	1 cut(s)	1528
BcoDI	GTCTC	4 cut(s)	1606, 1969, 2575, 2898
BfaI	CTAG	5 cut(s)	395, 2177, 2648, 2723, 2960
BfmI	CTRYAG	4 cut(s)	369, 621, 1382, 1576
BfoI	RGCGCY	1 cut(s)	2773
BfrI	CTTAAG	1 cut(s)	1586
BfuI	GTATCC	2 cut(s)	877, 1820
BglI	GCCNNNNNGGC	1 cut(s)	980
BisI	GCNGC	7 cut(s)	228, 262, 731, 782, 2047, 2112, 3159
BlpI	GCTNAGC	1 cut(s)	2238
BlsI	GCNGC	7 cut(s)	229, 263, 732, 783, 2048, 2113, 3160
BmcAI	AGTACT	1 cut(s)	2539
Bme1390I	CCNGG	2 cut(s)	788, 2527
Bme18I	GGWCC	3 cut(s)	1430, 2407, 2522
BmeRI	GACNNNNNGTC	1 cut(s)	2356
BmeT110I	CYCGRG	1 cut(s)	18
BmgT120I	GGNCC	5 cut(s)	1430, 1847, 2407, 2522, 2736
BmiI	GGNNCC	6 cut(s)	1441, 1501, 1644, 2523, 2524, 2771
BmrFI	CCNGG	2 cut(s)	788, 2527
BmrI	ACTGGG	1 cut(s)	869
BmsI	GCATC	6 cut(s)	248, 295, 2076, 2296, 2765, 3013
BmuI	ACTGGG	1 cut(s)	869
BoxI	GACNNNNGTC	1 cut(s)	1454
BplI	GAGNNNNNCTC	4 cut(s)	202, 234, 2685, 2717
BpmI	CTGGAG	2 cut(s)	92, 770
Bpu10I	CCTNAGC	2 cut(s)	2430, 2544
Bpu1102I	GCTNAGC	1 cut(s)	2238
BpuEI	CTTGAG	6 cut(s)	891, 2024, 2033, 2102, 2228, 2862
BsaBI	GATNNNNATC	2 cut(s)	1595, 3095
BsaHI	GRCGYC	1 cut(s)	2770
BsaI	GGTCTC	1 cut(s)	1606
BsaJI	CCNNGG	5 cut(s)	1616, 1631, 2292, 2525, 2526
BsaXI	ACNNNNNCTCC	2 cut(s)	1852, 1882
Bsc4I	CCNNNNNNNGG	4 cut(s)	1427, 1921, 2531, 2532
Bse118I	RCCGGY	1 cut(s)	143
Bse1I	ACTGG	7 cut(s)	24, 259, 753, 864, 1850, 2773, 3060
Bse21I	CCTNAGG	1 cut(s)	2627
Bse3DI	GCAATG	4 cut(s)	945, 1181, 2899, 3003
Bse8I	GATNNNNATC	2 cut(s)	1595, 3095
BseBI	CCWGG	2 cut(s)	788, 2527
BseDI	CCNNGG	5 cut(s)	1616, 1631, 2292, 2525, 2526
BseGI	GGATG	9 cut(s)	206, 263, 310, 931, 2536, 2637, 3007, 3028, 3096
BseJI	GATNNNNATC	2 cut(s)	1595, 3095
BseLI	CCNNNNNNNGG	4 cut(s)	1427, 1921, 2531, 2532
BseMI	GCAATG	4 cut(s)	945, 1181, 2899, 3003
BseNI	ACTGG	7 cut(s)	24, 259, 753, 864, 1850, 2773, 3060
BseRI	GAGGAG	6 cut(s)	1151, 1775, 1860, 2009, 2459, 3153
BseXI	GCAGC	7 cut(s)	214, 273, 742, 793, 2058, 2098, 3145
BsgI	GTGCAG	1 cut(s)	165
Bsh1236I	CGCG	1 cut(s)	1891
BshFI	GGCC	5 cut(s)	147, 1849, 2483, 2708, 2738
BshNI	GGYRCC	2 cut(s)	1642, 2769
BsiHKAI	GWGCWC	2 cut(s)	19, 2560
BsiHKCI	CYCGRG	1 cut(s)	18
BsiSI	CCGG	1 cut(s)	144
BslFI	GGGAC	4 cut(s)	229, 434, 1376, 2508
BslI	CCNNNNNNNGG	4 cut(s)	1427, 1921, 2531, 2532
BsmAI	GTCTC	4 cut(s)	1606, 1969, 2575, 2898
BsmBI	CGTCTC	1 cut(s)	1969
BsmFI	GGGAC	4 cut(s)	229, 434, 1376, 2508
BsmI	GAATGC	1 cut(s)	2431
BsnI	GGCC	5 cut(s)	147, 1849, 2483, 2708, 2738
Bso31I	GGTCTC	1 cut(s)	1606
BsoBI	CYCGRG	1 cut(s)	18
Bsp1286I	GDGCHC	2 cut(s)	19, 2560
Bsp1720I	GCTNAGC	1 cut(s)	2238
Bsp68I	TCGCGA	1 cut(s)	1891
BspACI	CCGC	5 cut(s)	1772, 2044, 2369, 2820, 2925
BspANI	GGCC	5 cut(s)	147, 1849, 2483, 2708, 2738
BspFNI	CGCG	1 cut(s)	1891
BspHI	TCATGA	2 cut(s)	2166, 3106
BspLI	GGNNCC	6 cut(s)	1441, 1501, 1644, 2523, 2524, 2771
BspMAI	CTGCAG	1 cut(s)	1386
BspPI	GGATC	5 cut(s)	80, 1059, 1725, 1932, 3088
BspQI	GCTCTTC	1 cut(s)	2970
BspT107I	GGYRCC	2 cut(s)	1642, 2769
BspTI	CTTAAG	1 cut(s)	1586
BspTNI	GGTCTC	1 cut(s)	1606
BsrDI	GCAATG	4 cut(s)	945, 1181, 2899, 3003
BsrFI	RCCGGY	1 cut(s)	143
BsrI	ACTGG	7 cut(s)	24, 259, 753, 864, 1850, 2773, 3060
BssAI	RCCGGY	1 cut(s)	143
BssECI	CCNNGG	5 cut(s)	1616, 1631, 2292, 2525, 2526
BssNAI	GTATAC	1 cut(s)	827
BssNI	GRCGYC	1 cut(s)	2770
BssSI	CACGAG	2 cut(s)	2969, 3131
BssT1I	CCWWGG	3 cut(s)	1616, 1631, 2292
Bst1107I	GTATAC	1 cut(s)	827
Bst2BI	CACGAG	2 cut(s)	2969, 3131
Bst2UI	CCWGG	2 cut(s)	788, 2527
Bst4CI	ACNGT	5 cut(s)	296, 379, 1699, 2107, 2733
Bst6I	CTCTTC	6 cut(s)	938, 1200, 1869, 2175, 2766, 2970
BstACI	GRCGYC	1 cut(s)	2770
BstAFI	CTTAAG	1 cut(s)	1586
BstAPI	GCANNNNNTGC	1 cut(s)	1642
BstC8I	GCNNGC	4 cut(s)	225, 1386, 1746, 2710
BstF5I	GGATG	9 cut(s)	206, 263, 310, 931, 2536, 2637, 3007, 3028, 3096
BstFNI	CGCG	1 cut(s)	1891
BstH2I	RGCGCY	1 cut(s)	2773
BstHHI	GCGC	3 cut(s)	2028, 2673, 2772
BstMAI	GTCTC	4 cut(s)	1606, 1969, 2575, 2898
BstMWI	GCNNNNNNNGC	5 cut(s)	911, 980, 1072, 1568, 1642
BstNI	CCWGG	2 cut(s)	788, 2527
BstNSI	RCATGY	1 cut(s)	2281
BstPAI	GACNNNNGTC	1 cut(s)	1454
BstSCI	CCNGG	2 cut(s)	786, 2525
BstSFI	CTRYAG	4 cut(s)	369, 621, 1382, 1576
BstUI	CGCG	1 cut(s)	1891
BstV1I	GCAGC	7 cut(s)	214, 273, 742, 793, 2058, 2098, 3145
BstX2I	RGATCY	1 cut(s)	1924
BstYI	RGATCY	1 cut(s)	1924
BstZ17I	GTATAC	1 cut(s)	827
Bsu36I	CCTNAGG	1 cut(s)	2627
BsuI	GTATCC	2 cut(s)	877, 1820
BsuRI	GGCC	5 cut(s)	147, 1849, 2483, 2708, 2738
BtsCI	GGATG	9 cut(s)	206, 263, 310, 931, 2536, 2637, 3007, 3028, 3096
BtsI	GCAGTG	1 cut(s)	3092
BtsIMutI	CAGTG	6 cut(s)	31, 301, 676, 2560, 3053, 3092
BtuMI	TCGCGA	1 cut(s)	1891
Cac8I	GCNNGC	4 cut(s)	225, 1386, 1746, 2710
CaiI	CAGNNNCTG	2 cut(s)	377, 2111
CciI	TCATGA	2 cut(s)	2166, 3106
CfoI	GCGC	3 cut(s)	2028, 2673, 2772
Cfr10I	RCCGGY	1 cut(s)	143
Cfr13I	GGNCC	5 cut(s)	1430, 1847, 2407, 2522, 2736
CseI	GACGC	2 cut(s)	2891, 3059
Csp6I	GTAC	2 cut(s)	986, 2538
CviQI	GTAC	2 cut(s)	986, 2538
DinI	GGCGCC	1 cut(s)	2771
DraIII	CACNNNGTG	2 cut(s)	188, 1642
DriI	GACNNNNNGTC	1 cut(s)	2356
EaeI	YGGCCR	1 cut(s)	145
Eam1104I	CTCTTC	6 cut(s)	938, 1200, 1869, 2175, 2766, 2970
Eam1105I	GACNNNNNGTC	1 cut(s)	2356
EarI	CTCTTC	6 cut(s)	938, 1200, 1869, 2175, 2766, 2970
EciI	GGCGGA	1 cut(s)	2940
Eco130I	CCWWGG	3 cut(s)	1616, 1631, 2292
Eco147I	AGGCCT	1 cut(s)	2483
Eco31I	GGTCTC	1 cut(s)	1606
Eco32I	GATATC	2 cut(s)	1087, 3112
Eco47I	GGWCC	3 cut(s)	1430, 2407, 2522
Eco57I	CTGAAG	6 cut(s)	548, 1343, 1464, 1823, 2054, 2339
Eco81I	CCTNAGG	1 cut(s)	2627
Eco88I	CYCGRG	1 cut(s)	18
EcoO109I	RGGNCCY	2 cut(s)	2407, 2522
EcoRI	GAATTC	1 cut(s)	1013
EcoRII	CCWGG	2 cut(s)	786, 2525
EcoRV	GATATC	2 cut(s)	1087, 3112
EcoT14I	CCWWGG	3 cut(s)	1616, 1631, 2292
EcoT22I	ATGCAT	2 cut(s)	1973, 2758
EgeI	GGCGCC	1 cut(s)	2771
EheI	GGCGCC	1 cut(s)	2771
ErhI	CCWWGG	3 cut(s)	1616, 1631, 2292
Esp3I	CGTCTC	1 cut(s)	1969
FalI	AAGNNNNNCTT	2 cut(s)	2190, 2222
FaqI	GGGAC	4 cut(s)	229, 434, 1376, 2508
FbaI	TGATCA	1 cut(s)	1528
FblI	GTMKAC	2 cut(s)	826, 1882
Fnu4HI	GCNGC	7 cut(s)	228, 262, 731, 782, 2047, 2112, 3159
FokI	GGATG	9 cut(s)	213, 270, 317, 938, 2543, 2644, 3014, 3035, 3103
Fsp4HI	GCNGC	7 cut(s)	228, 262, 731, 782, 2047, 2112, 3159
FspBI	CTAG	5 cut(s)	395, 2177, 2648, 2723, 2960
GlaI	GCGC	3 cut(s)	2027, 2672, 2771
GluI	GCNGC	7 cut(s)	228, 262, 731, 782, 2047, 2112, 3159
GsuI	CTGGAG	2 cut(s)	92, 770
HaeII	RGCGCY	1 cut(s)	2773
HaeIII	GGCC	5 cut(s)	147, 1849, 2483, 2708, 2738
HapII	CCGG	1 cut(s)	144
HgaI	GACGC	2 cut(s)	2891, 3059
HhaI	GCGC	3 cut(s)	2028, 2673, 2772
Hin1I	GRCGYC	1 cut(s)	2770
Hin6I	GCGC	3 cut(s)	2026, 2671, 2770
HinP1I	GCGC	3 cut(s)	2026, 2671, 2770
HincII	GTYRAC	2 cut(s)	891, 2778
HindII	GTYRAC	2 cut(s)	891, 2778
HindIII	AAGCTT	2 cut(s)	812, 2199
HpaI	GTTAAC	1 cut(s)	2778
HpaII	CCGG	1 cut(s)	144
HphI	GGTGA	5 cut(s)	133, 956, 2309, 3091, 3133
Hpy166II	GTNNAC	5 cut(s)	827, 891, 1813, 1883, 2778
Hpy8I	GTNNAC	5 cut(s)	827, 891, 1813, 1883, 2778
HpyCH4III	ACNGT	5 cut(s)	296, 379, 1699, 2107, 2733
HpyCH4IV	ACGT	6 cut(s)	46, 823, 887, 1978, 2158, 2932
HpyF10VI	GCNNNNNNNGC	5 cut(s)	911, 980, 1072, 1568, 1642
HpySE526I	ACGT	6 cut(s)	46, 823, 887, 1978, 2158, 2932
Hsp92I	GRCGYC	1 cut(s)	2770
HspAI	GCGC	3 cut(s)	2026, 2671, 2770
KasI	GGCGCC	1 cut(s)	2769
KflI	GGGWCCC	1 cut(s)	2522
Ksp22I	TGATCA	1 cut(s)	1528
KspAI	GTTAAC	1 cut(s)	2778
LguI	GCTCTTC	1 cut(s)	2970
LmnI	GCTCC	6 cut(s)	789, 1156, 1445, 2220, 2446, 3166
Lsp1109I	GCAGC	7 cut(s)	214, 273, 742, 793, 2058, 2098, 3145
LweI	GCATC	6 cut(s)	248, 295, 2076, 2296, 2765, 3013
MaeI	CTAG	5 cut(s)	395, 2177, 2648, 2723, 2960
MaeII	ACGT	6 cut(s)	46, 823, 887, 1978, 2158, 2932
MaeIII	GTNAC	5 cut(s)	410, 1345, 1447, 1522, 2471
MfeI	CAATTG	3 cut(s)	1425, 2616, 3069
MflI	RGATCY	1 cut(s)	1924
MhlI	GDGCHC	2 cut(s)	19, 2560
Mly113I	GGCGCC	1 cut(s)	2770
MlyI	GAGTC	7 cut(s)	211, 371, 493, 1377, 1676, 1887, 2294
MmeI	TCCRAC	2 cut(s)	1060, 3014
Mph1103I	ATGCAT	2 cut(s)	1973, 2758
MroXI	GAANNNNTTC	1 cut(s)	1214
MslI	CAYNNNNRTG	1 cut(s)	199
MspA1I	CMGCKG	1 cut(s)	2820
MspCI	CTTAAG	1 cut(s)	1586
MspI	CCGG	1 cut(s)	144
MspR9I	CCNGG	2 cut(s)	788, 2527
MunI	CAATTG	3 cut(s)	1425, 2616, 3069
Mva1269I	GAATGC	1 cut(s)	2431
MvaI	CCWGG	2 cut(s)	788, 2527
MvnI	CGCG	1 cut(s)	1891
MwoI	GCNNNNNNNGC	5 cut(s)	911, 980, 1072, 1568, 1642
NarI	GGCGCC	1 cut(s)	2770
NlaIV	GGNNCC	6 cut(s)	1441, 1501, 1644, 2523, 2524, 2771
NmuCI	GTSAC	3 cut(s)	1447, 1522, 2471
NruI	TCGCGA	1 cut(s)	1891
NsiI	ATGCAT	2 cut(s)	1973, 2758
NspI	RCATGY	1 cut(s)	2281
PaeR7I	CTCGAG	1 cut(s)	18
PagI	TCATGA	2 cut(s)	2166, 3106
PasI	CCCWGGG	1 cut(s)	2526
PceI	AGGCCT	1 cut(s)	2483
PciSI	GCTCTTC	1 cut(s)	2970
PctI	GAATGC	1 cut(s)	2431
PdmI	GAANNNNTTC	1 cut(s)	1214
PflFI	GACNNNGTC	1 cut(s)	1367
PflMI	CCANNNNNTGG	1 cut(s)	1427
PfoI	TCCNGGA	1 cut(s)	786
PkrI	GCNGC	7 cut(s)	229, 263, 732, 783, 2048, 2113, 3160
PleI	GAGTC	7 cut(s)	211, 370, 492, 1376, 1676, 1887, 2293
PluTI	GGCGCC	1 cut(s)	2773
PpsI	GAGTC	7 cut(s)	211, 370, 492, 1376, 1676, 1887, 2293
PpuMI	RGGWCCY	2 cut(s)	2407, 2522
PshAI	GACNNNNGTC	1 cut(s)	1454
PshBI	ATTAAT	2 cut(s)	1314, 1374
PsiI	TTATAA	1 cut(s)	338
Psp1406I	AACGTT	2 cut(s)	46, 2932
Psp5II	RGGWCCY	2 cut(s)	2407, 2522
Psp6I	CCWGG	2 cut(s)	786, 2525
PspGI	CCWGG	2 cut(s)	786, 2525
PspN4I	GGNNCC	6 cut(s)	1441, 1501, 1644, 2523, 2524, 2771
PspPI	GGNCC	5 cut(s)	1430, 1847, 2407, 2522, 2736
PspPPI	RGGWCCY	2 cut(s)	2407, 2522
PspXI	VCTCGAGB	1 cut(s)	18
PstI	CTGCAG	1 cut(s)	1386
PstNI	CAGNNNCTG	2 cut(s)	377, 2111
PsuI	RGATCY	1 cut(s)	1924
PsyI	GACNNNGTC	1 cut(s)	1367
RruI	TCGCGA	1 cut(s)	1891
RsaI	GTAC	2 cut(s)	987, 2539
RsaNI	GTAC	2 cut(s)	986, 2538
RseI	CAYNNNNRTG	1 cut(s)	199
SapI	GCTCTTC	1 cut(s)	2970
SatI	GCNGC	7 cut(s)	228, 262, 731, 782, 2047, 2112, 3159
Sau96I	GGNCC	5 cut(s)	1430, 1847, 2407, 2522, 2736
ScaI	AGTACT	1 cut(s)	2539
SchI	GAGTC	7 cut(s)	211, 371, 493, 1377, 1676, 1887, 2294
ScrFI	CCNGG	2 cut(s)	788, 2527
SduI	GDGCHC	2 cut(s)	19, 2560
SfaNI	GCATC	6 cut(s)	248, 295, 2076, 2296, 2765, 3013
SfcI	CTRYAG	4 cut(s)	369, 621, 1382, 1576
SfoI	GGCGCC	1 cut(s)	2771
Sfr274I	CTCGAG	1 cut(s)	18
SinI	GGWCC	3 cut(s)	1430, 2407, 2522
SlaI	CTCGAG	1 cut(s)	18
SmiMI	CAYNNNNRTG	1 cut(s)	199
SmlI	CTYRAG	8 cut(s)	18, 906, 1586, 2003, 2012, 2081, 2207, 2877
SmoI	CTYRAG	8 cut(s)	18, 906, 1586, 2003, 2012, 2081, 2207, 2877
SseBI	AGGCCT	1 cut(s)	2483
SsiI	CCGC	5 cut(s)	1772, 2044, 2369, 2820, 2925
SspDI	GGCGCC	1 cut(s)	2769
SspI	AATATT	2 cut(s)	454, 1151
SspMI	CTAG	5 cut(s)	395, 2177, 2648, 2723, 2960
StuI	AGGCCT	1 cut(s)	2483
StyD4I	CCNGG	2 cut(s)	786, 2525
StyI	CCWWGG	3 cut(s)	1616, 1631, 2292
TaaI	ACNGT	5 cut(s)	296, 379, 1699, 2107, 2733
TaiI	ACGT	6 cut(s)	49, 826, 890, 1981, 2161, 2935
TatI	WGTACW	1 cut(s)	2537
TscAI	CASTG	6 cut(s)	31, 301, 676, 2560, 3060, 3092
TseFI	GTSAC	3 cut(s)	1447, 1522, 2471
TseI	GCWGC	7 cut(s)	227, 261, 730, 781, 2046, 2111, 3158
Tsp45I	GTSAC	3 cut(s)	1447, 1522, 2471
TspGWI	ACGGA	3 cut(s)	168, 459, 1839
TspRI	CASTG	6 cut(s)	31, 301, 676, 2560, 3060, 3092
Tth111I	GACNNNGTC	1 cut(s)	1367
Van91I	CCANNNNNTGG	1 cut(s)	1427
Vha464I	CTTAAG	1 cut(s)	1586
VpaK11BI	GGWCC	3 cut(s)	1430, 2407, 2522
VspI	ATTAAT	2 cut(s)	1314, 1374
XapI	RAATTY	6 cut(s)	85, 321, 533, 1013, 2490, 2741
XbaI	TCTAGA	1 cut(s)	2722
XceI	RCATGY	1 cut(s)	2281
XcmI	CCANNNNNNNNNTGG	2 cut(s)	116, 155
XhoI	CTCGAG	1 cut(s)	18
XmiI	GTMKAC	2 cut(s)	826, 1882
XmnI	GAANNNNTTC	1 cut(s)	1214
XspI	CTAG	5 cut(s)	395, 2177, 2648, 2723, 2960
ZrmI	AGTACT	1 cut(s)	2539
Zsp2I	ATGCAT	2 cut(s)	1973, 2758

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.