Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000450.1

Orthogroup ID

OG0003625

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 10830

Gene Structure 10830 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000450.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2774 bp

gaagaaaggttgctagtcggaaggaggacctccgggagctaattgaacattttagtattgatgttgagaatccatgtgtaataatgggccaagacagaagcagagagtttttgcattctgggaatgacaaagataaatttaagttcttttacaaggccacacttctgcagcaagttgaagagcttttgcaagacattgagaaacagttggagaaggcaaatgttgttgttgatcaattagagggctcaataagacccatagaaagggaacttaatgagttacatgaaaagatcaaaaacatggagcacattgaagaaatatctcaacaagcgaagcagctaaaaaagaagcttgcttggtcatgggtatatgatgtagacaggcaactccagcaaaagaatgcaaaaattggaaagctgaaaaatcgtgtacctctttgtcaagctaaaattgatcagtttagaggtgaagtggagaaacttagccaatgctataccttgaagaaatctgagattgcaagcatggtggaaaagaccgctgaagttaggagaatgaaggacgaattgcgacagtcgctagcatcggctacaaaagagaagcttaagctagaagaagaatatggccgcaaaactaactacatccagaaattgacaaactctgttaggtctcttcagcaacagattcaggatgctgaggagcagcatgccagaaatacacaggcagaagaatctgcaatggaggaaaagctgaaagaactgcataatgaggtcgctactattgaatcaatgcttgcaaggttgcaggaagaagacagtgccttatcaataagtgtacacaagacaattactgaaattggaaaattaactgaaatgattcaaagcagagagaaggaatgtcaaaaatactccaataaagtccgcgaggttttgagaaatcaaagtaacaaggtcacagcttttggtggagatagagtgatggaccttctacgtataattgagaggaatcatcagagattcaaaagccctccaattggtccgattggtgcccatttgactttgaataatggagatgaatgggctagaactgttgaaaatgctgtaggaaggctgctcaatgctttcattgtaacaaatcataaagactctcaacttctcagaacatgtgcaagggaagcaagctataatcaccttcagattatcatatatgacttttcattaccaaggttgaatattccacctcacatgcttccacaaacaagacacccaactactctttctcttctccattctgaaaatcatactgtggtaaatgtcctggtagatatgggaagtgttgaaaggcaagttcttgttaaaacatatgaggaggggaaggaagttgcttttgaccagaggatccccaatctgaaggaggtctacacttatgatgggcgaaagatgttttcgcgtggttctgtccagacagttcttcctcccattaggcatgatagacctgctcgtctctgtgctaattatgatgatcaaatcaatgagcttaaaacatcagcatcagctgtacaaaaagaagctgaggagtgcaggacgagaaaaagggaagaagaagacaaactttggaatctcaaagaaaaacaccaaagtgtgaagaggaggcgtatgaatgctgaccgtgatttggcgtctaagagactagctattcaagacagtgcatatgatgcggaagccagtacatcacctgcatcaactgttgatgaccttcatcaagacattttgaaagtccaagaggagattcaagagagagaaatgtcgctgaaaacctttgaagtcagaattagtgaagctgtggcgaagaccaatgatcttaaagtaacatttgagaatctatgtgagtcagcaaaaggagacattgatgcctttgagaaagcagagagagatttgatggagatagaaacaaaactaggttctgcgcaaacggagaagcttcattatgaaggtctaatgaagaccaaggtccttcatgaaatcaatgacgctgaaaaacaatataaagagcttgagcatcaccgcgaggacaactgtagaaaggcttcaatcctctgtcctgaaagtgaaattacagctttgggtgattgggatggtagcactccagaacaactcagtgcccaattaaccaggctgaatcagagacttcagcgagagagtgagagatgcactgaatccattgatgagctccgaatgtcatatgagagaaaagaacgtaagattttaagaaaacagaaaacatacagagcttttcgagaaaagttgaatgcttgccagaaagccctaaagttgcgaagtacaaagttccagagaaataaagatttactaaagcgccagatgacgtggcgatttaattctcatctgggaaggaaagggttcagtgggaagattaaggtcagttatgaggagagaaccctttcaattgaggtaaagatgccccaggattcatcaagcagcactgttcgcgacactagagggctttcaggtggagaacgctccttctcaacattgtgctttgcgctggctcttcatgatatgactgaagccccatttagagctatggatgagtttgatgtatttatggatgctgtaagtcggaaaatcagccttgatactcttgttgagtttgcattggcgcaaggatcccaatgggtacttatcacccctcatgatatcagcatggtgaaaaatggggatcggataaagaagcagcaaatggcggctcctcgttcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_23 SMC_N

Protein Analysis

923

Amino Acids

106.94

Weight (kDa)

8.41

Isoelectric Point (pI)

48.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003625)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07660 AT5G61460
fragaria_vesca	FvH4_7g27291 FvH4_7g27291 FvH4_7g27291 FvH4_7g27291 FvH4_7g27291 FvH4_7g27291 FvH4_7g27291 FvH4_7g27291 FvH4_7g27291
malus_domestica	MD07G1252300.v1.1
prunus_persica	Prupe.2G275800_v2.0.a1 Prupe.2G275800_v2.0.a1 Prupe.2G275800_v2.0.a1
pyrus_communis	pycom07g22470
rosa_chinensis	RchiOBHm_Chr1g0342881 RchiOBHm_Chr1g0374131 RchiOBHm_Chr4g0408871 RchiOBHm_Chr7g0243831
rosa_laevigata	RLG00000026760
rosa_multiflora	Rmu_sc0008430.1_g000005 Rmu_sc0020614.1_g000004 Rmu_sc0028209.1_g000001 Rmu_sc0039486.1_g000001 Rmu_ssc0000450.1_g000001
rosa_roxburghii	Rroxscaffold_4G00283700 Rroxscaffold_5G00354810
rosa_rugosa	Rorug01G0380900.1
rosa_samantha	Rh1AG391800 Rh1BG355900 Rh1DG386500 Rh4DG145500 Rh4DG209300
rosa_wichuraiana	Rw1G034380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1740
AasI	GACNNNNNNGTC	1 cut(s)	1496
Acc16I	TGCGCA	1 cut(s)	1964
Acc36I	ACCTGC	2 cut(s)	1500, 1740
AccB1I	GGYRCC	1 cut(s)	1042
AccI	GTMKAC	2 cut(s)	377, 1415
AccII	CGCG	4 cut(s)	920, 1446, 2063, 2504
AciI	CCGC	6 cut(s)	536, 624, 918, 1714, 2061, 2758
AclWI	GGATC	5 cut(s)	1389, 1402, 2675, 2688, 2741
AcoI	YGGCCR	1 cut(s)	621
AcsI	RAATTY	1 cut(s)	136
AcuI	CTGAAG	6 cut(s)	560, 655, 1174, 1426, 2170, 2600
AcyI	GRCGYC	1 cut(s)	1675
AfaI	GTAC	6 cut(s)	431, 833, 1556, 1725, 2337, 2693
AfiI	CCNNNNNNNGG	3 cut(s)	263, 1030, 1671
AflII	CTTAAG	1 cut(s)	601
AflIII	ACRYGT	1 cut(s)	1159
AjiI	CACGTC	1 cut(s)	2381
AjnI	CCWGG	3 cut(s)	1313, 2167, 2477
AjuI	GAANNNNNNNTTGG	4 cut(s)	1257, 1289, 1769, 1801
AleI	CACNNNNGTG	1 cut(s)	1634
Alw21I	GWGCWC	2 cut(s)	308, 2228
Alw26I	GTCTC	5 cut(s)	671, 1504, 1677, 1892, 2175
AlwI	GGATC	5 cut(s)	1389, 1402, 2675, 2688, 2741
AoxI	GGCC	3 cut(s)	87, 155, 621
ApeKI	GCWGC	6 cut(s)	168, 336, 699, 1107, 2492, 2748
ApoI	RAATTY	1 cut(s)	136
Asp700I	GAANNNNTTC	4 cut(s)	872, 2082, 2413, 2454
AspLEI	GCGC	4 cut(s)	1965, 2372, 2559, 2676
AspS9I	GGNCC	5 cut(s)	27, 87, 978, 1033, 2007
AsuC2I	CCSGG	1 cut(s)	34
AsuHPI	GGTGA	7 cut(s)	478, 1177, 1721, 2050, 2134, 2691, 2733
AsuNHI	GCTAGC	1 cut(s)	576
AvaII	GGWCC	4 cut(s)	27, 978, 1033, 2007
BaeGI	GKGCMC	2 cut(s)	1047, 2160
BaeI	ACNNNNGTAYC	2 cut(s)	2642, 2675
BamHI	GGATCC	2 cut(s)	1394, 2680
BanI	GGYRCC	1 cut(s)	1042
BanII	GRGCYC	2 cut(s)	247, 2228
BarI	GAAGNNNNNNTAC	4 cut(s)	1399, 1431, 2067, 2099
BbsI	GAAGAC	4 cut(s)	815, 1607, 1852, 2005
Bbv12I	GWGCWC	2 cut(s)	308, 2228
BbvCI	CCTCAGC	2 cut(s)	692, 1568
BbvI	GCAGC	6 cut(s)	180, 348, 711, 1094, 2504, 2760
BccI	CCATC	4 cut(s)	969, 1420, 1929, 2125
BciT130I	CCWGG	3 cut(s)	1315, 2169, 2479
BclI	TGATCA	3 cut(s)	231, 453, 1518
BcnI	CCSGG	1 cut(s)	34
BcoDI	GTCTC	5 cut(s)	671, 1504, 1677, 1892, 2175
BfaI	CTAG	7 cut(s)	14, 577, 607, 1079, 1687, 1954, 2510
BfmI	CTRYAG	3 cut(s)	166, 1097, 2073
BfoI	RGCGCY	1 cut(s)	2373
BfrI	CTTAAG	1 cut(s)	601
BfuAI	ACCTGC	2 cut(s)	1500, 1740
BisI	GCNGC	8 cut(s)	169, 337, 624, 700, 1108, 2493, 2749, 2759
BlsI	GCNGC	8 cut(s)	170, 338, 625, 701, 1109, 2494, 2750, 2760
Bme1390I	CCNGG	4 cut(s)	34, 1315, 2169, 2479
Bme18I	GGWCC	4 cut(s)	27, 978, 1033, 2007
BmgBI	CACGTC	1 cut(s)	2381
BmgT120I	GGNCC	5 cut(s)	27, 87, 978, 1033, 2007
BmiI	GGNNCC	4 cut(s)	1044, 1396, 2682, 2762
BmrFI	CCNGG	4 cut(s)	34, 1315, 2169, 2479
BmtI	GCTAGC	1 cut(s)	580
BoxI	GACNNNNGTC	1 cut(s)	2005
BpiI	GAAGAC	4 cut(s)	815, 1607, 1852, 2005
BpmI	CTGGAG	2 cut(s)	373, 2126
Bpu10I	CCTNAGC	2 cut(s)	692, 1568
BpuEI	CTTGAG	1 cut(s)	2071
BpuMI	CCSGG	1 cut(s)	34
BsaAI	YACGTR	1 cut(s)	988
BsaHI	GRCGYC	1 cut(s)	1675
BsaI	GGTCTC	1 cut(s)	671
BsaJI	CCNNGG	3 cut(s)	1219, 2003, 2477
BsaXI	ACNNNNNCTCC	2 cut(s)	956, 986
Bsc4I	CCNNNNNNNGG	3 cut(s)	263, 1030, 1671
Bse1I	ACTGG	1 cut(s)	1721
Bse3DI	GCAATG	1 cut(s)	740
BseBI	CCWGG	3 cut(s)	1315, 2169, 2479
BseDI	CCNNGG	3 cut(s)	1219, 2003, 2477
BseGI	GGATG	5 cut(s)	638, 693, 2136, 2607, 2628
BseLI	CCNNNNNNNGG	3 cut(s)	263, 1030, 1671
BseMI	GCAATG	1 cut(s)	740
BseMII	CTCAG	5 cut(s)	500, 683, 1167, 1559, 2166
BseNI	ACTGG	1 cut(s)	1721
BseRI	GAGGAG	7 cut(s)	709, 1378, 1585, 1659, 1795, 2458, 2753
BseSI	GKGCMC	2 cut(s)	1047, 2160
BseXI	GCAGC	6 cut(s)	180, 348, 711, 1094, 2504, 2760
BsgI	GTGCAG	1 cut(s)	1596
Bsh1236I	CGCG	4 cut(s)	920, 1446, 2063, 2504
BshFI	GGCC	3 cut(s)	89, 157, 623
BshNI	GGYRCC	1 cut(s)	1042
BsiHKAI	GWGCWC	2 cut(s)	308, 2228
BsiSI	CCGG	1 cut(s)	33
BslI	CCNNNNNNNGG	3 cut(s)	263, 1030, 1671
BsmAI	GTCTC	5 cut(s)	671, 1504, 1677, 1892, 2175
BsmBI	CGTCTC	1 cut(s)	1504
BsmI	GAATGC	4 cut(s)	114, 405, 1662, 2310
BsnI	GGCC	3 cut(s)	89, 157, 623
Bso31I	GGTCTC	1 cut(s)	671
Bsp1286I	GDGCHC	5 cut(s)	247, 308, 1047, 2160, 2228
Bsp1407I	TGTACA	2 cut(s)	831, 1554
Bsp143I	GATC	8 cut(s)	231, 290, 453, 1394, 1518, 1854, 2680, 2733
Bsp68I	TCGCGA	1 cut(s)	2504
BspACI	CCGC	6 cut(s)	536, 624, 918, 1714, 2061, 2758
BspANI	GGCC	3 cut(s)	89, 157, 623
BspCNI	CTCAG	5 cut(s)	501, 684, 1166, 1560, 2165
BspFNI	CGCG	4 cut(s)	920, 1446, 2063, 2504
BspHI	TCATGA	3 cut(s)	2013, 2568, 2706
BspLI	GGNNCC	4 cut(s)	1044, 1396, 2682, 2762
BspMAI	CTGCAG	1 cut(s)	170
BspMI	ACCTGC	2 cut(s)	1500, 1740
BspOI	GCTAGC	1 cut(s)	580
BspPI	GGATC	5 cut(s)	1389, 1402, 2675, 2688, 2741
BspQI	GCTCTTC	2 cut(s)	173, 2570
BspT107I	GGYRCC	1 cut(s)	1042
BspTI	CTTAAG	1 cut(s)	601
BspTNI	GGTCTC	1 cut(s)	671
BsrDI	GCAATG	1 cut(s)	740
BsrGI	TGTACA	2 cut(s)	831, 1554
BsrI	ACTGG	1 cut(s)	1721
BssECI	CCNNGG	3 cut(s)	1219, 2003, 2477
BssMI	GATC	8 cut(s)	231, 290, 453, 1394, 1518, 1854, 2680, 2733
BssNI	GRCGYC	1 cut(s)	1675
BssT1I	CCWWGG	2 cut(s)	1219, 2003
Bst2UI	CCWGG	3 cut(s)	1315, 2169, 2479
Bst6I	CTCTTC	5 cut(s)	173, 674, 1283, 1636, 2570
BstACI	GRCGYC	1 cut(s)	1675
BstAFI	CTTAAG	1 cut(s)	601
BstAPI	GCANNNNNTGC	1 cut(s)	1711
BstAUI	TGTACA	2 cut(s)	831, 1554
BstBAI	YACGTR	1 cut(s)	988
BstC8I	GCNNGC	8 cut(s)	353, 519, 578, 704, 791, 1176, 2310, 2561
BstDEI	CTNAG	7 cut(s)	481, 509, 692, 1153, 1568, 1679, 2152
BstF5I	GGATG	5 cut(s)	638, 693, 2136, 2607, 2628
BstFNI	CGCG	4 cut(s)	920, 1446, 2063, 2504
BstH2I	RGCGCY	1 cut(s)	2373
BstHHI	GCGC	4 cut(s)	1965, 2372, 2559, 2676
BstKTI	GATC	8 cut(s)	234, 293, 456, 1397, 1521, 1857, 2683, 2736
BstMAI	GTCTC	5 cut(s)	671, 1504, 1677, 1892, 2175
BstMBI	GATC	8 cut(s)	231, 290, 453, 1394, 1518, 1854, 2680, 2733
BstMWI	GCNNNNNNNGC	5 cut(s)	390, 573, 1171, 1711, 2501
BstNI	CCWGG	3 cut(s)	1315, 2169, 2479
BstNSI	RCATGY	3 cut(s)	706, 1163, 1245
BstPAI	GACNNNNGTC	1 cut(s)	2005
BstSCI	CCNGG	4 cut(s)	32, 1313, 2167, 2477
BstSFI	CTRYAG	3 cut(s)	166, 1097, 2073
BstSLI	GKGCMC	2 cut(s)	1047, 2160
BstSNI	TACGTA	1 cut(s)	988
BstUI	CGCG	4 cut(s)	920, 1446, 2063, 2504
BstV1I	GCAGC	6 cut(s)	180, 348, 711, 1094, 2504, 2760
BstV2I	GAAGAC	4 cut(s)	815, 1607, 1852, 2005
BstX2I	RGATCY	2 cut(s)	1394, 2680
BstYI	RGATCY	2 cut(s)	1394, 2680
BsuRI	GGCC	3 cut(s)	89, 157, 623
BtrI	CACGTC	1 cut(s)	2381
BtsCI	GGATG	5 cut(s)	638, 693, 2136, 2607, 2628
BtsIMutI	CAGTG	6 cut(s)	819, 1707, 2160, 2207, 2424, 2495
BtuMI	TCGCGA	1 cut(s)	2504
BveI	ACCTGC	2 cut(s)	1500, 1740
Cac8I	GCNNGC	8 cut(s)	353, 519, 578, 704, 791, 1176, 2310, 2561
CciI	TCATGA	3 cut(s)	2013, 2568, 2706
CfoI	GCGC	4 cut(s)	1965, 2372, 2559, 2676
Cfr13I	GGNCC	5 cut(s)	27, 87, 978, 1033, 2007
CseI	GACGC	2 cut(s)	1664, 2035
Csp6I	GTAC	6 cut(s)	430, 832, 1555, 1724, 2336, 2692
CspCI	CAANNNNNGTGG	2 cut(s)	506, 541
CviQI	GTAC	6 cut(s)	430, 832, 1555, 1724, 2336, 2692
DdeI	CTNAG	7 cut(s)	481, 509, 692, 1153, 1568, 1679, 2152
DpnI	GATC	8 cut(s)	233, 292, 455, 1396, 1520, 1856, 2682, 2735
DpnII	GATC	8 cut(s)	231, 290, 453, 1394, 1518, 1854, 2680, 2733
DrdI	GACNNNNNNGTC	1 cut(s)	1496
DseDI	GACNNNNNNGTC	1 cut(s)	1496
EaeI	YGGCCR	1 cut(s)	621
Eam1104I	CTCTTC	5 cut(s)	173, 674, 1283, 1636, 2570
EarI	CTCTTC	5 cut(s)	173, 674, 1283, 1636, 2570
Ecl136II	GAGCTC	1 cut(s)	2226
Eco105I	TACGTA	1 cut(s)	988
Eco130I	CCWWGG	2 cut(s)	1219, 2003
Eco24I	GRGCYC	2 cut(s)	247, 2228
Eco31I	GGTCTC	1 cut(s)	671
Eco32I	GATATC	1 cut(s)	2712
Eco47I	GGWCC	4 cut(s)	27, 978, 1033, 2007
Eco53kI	GAGCTC	1 cut(s)	2226
Eco57I	CTGAAG	6 cut(s)	560, 655, 1174, 1426, 2170, 2600
EcoICRI	GAGCTC	1 cut(s)	2226
EcoO109I	RGGNCCY	2 cut(s)	27, 2007
EcoRII	CCWGG	3 cut(s)	1313, 2167, 2477
EcoRV	GATATC	1 cut(s)	2712
EcoT14I	CCWWGG	2 cut(s)	1219, 2003
EcoT38I	GRGCYC	2 cut(s)	247, 2228
ErhI	CCWWGG	2 cut(s)	1219, 2003
Esp3I	CGTCTC	1 cut(s)	1504
FalI	AAGNNNNNCTT	4 cut(s)	584, 616, 1592, 1624
FauNDI	CATATG	3 cut(s)	1359, 1707, 2238
FbaI	TGATCA	3 cut(s)	231, 453, 1518
FblI	GTMKAC	2 cut(s)	377, 1415
Fnu4HI	GCNGC	8 cut(s)	169, 337, 624, 700, 1108, 2493, 2749, 2759
FokI	GGATG	5 cut(s)	625, 700, 2143, 2614, 2635
FriOI	GRGCYC	2 cut(s)	247, 2228
Fsp4HI	GCNGC	8 cut(s)	169, 337, 624, 700, 1108, 2493, 2749, 2759
FspBI	CTAG	7 cut(s)	14, 577, 607, 1079, 1687, 1954, 2510
FspI	TGCGCA	1 cut(s)	1964
GlaI	GCGC	4 cut(s)	1964, 2371, 2558, 2675
GluI	GCNGC	8 cut(s)	169, 337, 624, 700, 1108, 2493, 2749, 2759
GsuI	CTGGAG	2 cut(s)	373, 2126
HaeII	RGCGCY	1 cut(s)	2373
HaeIII	GGCC	3 cut(s)	89, 157, 623
HapII	CCGG	1 cut(s)	33
HgaI	GACGC	2 cut(s)	1664, 2035
HhaI	GCGC	4 cut(s)	1965, 2372, 2559, 2676
Hin1I	GRCGYC	1 cut(s)	1675
Hin6I	GCGC	4 cut(s)	1963, 2370, 2557, 2674
HinP1I	GCGC	4 cut(s)	1963, 2370, 2557, 2674
HindIII	AAGCTT	3 cut(s)	349, 598, 1975
HpaII	CCGG	1 cut(s)	33
HphI	GGTGA	7 cut(s)	478, 1177, 1721, 2050, 2134, 2691, 2733
Hpy166II	GTNNAC	5 cut(s)	378, 430, 832, 834, 1416
Hpy8I	GTNNAC	5 cut(s)	378, 430, 832, 834, 1416
HpyCH4IV	ACGT	3 cut(s)	987, 2253, 2380
HpyF10VI	GCNNNNNNNGC	5 cut(s)	390, 573, 1171, 1711, 2501
HpyF3I	CTNAG	7 cut(s)	481, 509, 692, 1153, 1568, 1679, 2152
HpySE526I	ACGT	3 cut(s)	987, 2253, 2380
Hsp92I	GRCGYC	1 cut(s)	1675
HspAI	GCGC	4 cut(s)	1963, 2370, 2557, 2674
Ksp22I	TGATCA	3 cut(s)	231, 453, 1518
Kzo9I	GATC	8 cut(s)	231, 290, 453, 1394, 1518, 1854, 2680, 2733
LguI	GCTCTTC	2 cut(s)	173, 2570
LmnI	GCTCC	6 cut(s)	36, 303, 696, 2231, 2539, 2766
Lsp1109I	GCAGC	6 cut(s)	180, 348, 711, 1094, 2504, 2760
MaeI	CTAG	7 cut(s)	14, 577, 607, 1079, 1687, 1954, 2510
MaeII	ACGT	3 cut(s)	987, 2253, 2380
MaeIII	GTNAC	5 cut(s)	278, 940, 948, 1125, 1863
MalI	GATC	8 cut(s)	233, 292, 455, 1396, 1520, 1856, 2682, 2735
MboI	GATC	8 cut(s)	231, 290, 453, 1394, 1518, 1854, 2680, 2733
MfeI	CAATTG	2 cut(s)	1028, 2459
MflI	RGATCY	2 cut(s)	1394, 2680
MhlI	GDGCHC	5 cut(s)	247, 308, 1047, 2160, 2228
MlyI	GAGTC	2 cut(s)	1135, 1894
MmeI	TCCRAC	2 cut(s)	188, 2614
MroXI	GAANNNNTTC	4 cut(s)	872, 2082, 2413, 2454
MslI	CAYNNNNRTG	1 cut(s)	1634
MspA1I	CMGCKG	2 cut(s)	538, 1552
MspCI	CTTAAG	1 cut(s)	601
MspI	CCGG	1 cut(s)	33
MspR9I	CCNGG	4 cut(s)	34, 1315, 2169, 2479
MunI	CAATTG	2 cut(s)	1028, 2459
Mva1269I	GAATGC	4 cut(s)	114, 405, 1662, 2310
MvaI	CCWGG	3 cut(s)	1315, 2169, 2479
MvnI	CGCG	4 cut(s)	920, 1446, 2063, 2504
MwoI	GCNNNNNNNGC	5 cut(s)	390, 573, 1171, 1711, 2501
NciI	CCSGG	1 cut(s)	34
NdeI	CATATG	3 cut(s)	1359, 1707, 2238
NdeII	GATC	8 cut(s)	231, 290, 453, 1394, 1518, 1854, 2680, 2733
NheI	GCTAGC	1 cut(s)	576
NlaIV	GGNNCC	4 cut(s)	1044, 1396, 2682, 2762
NmuCI	GTSAC	1 cut(s)	948
NruI	TCGCGA	1 cut(s)	2504
NsbI	TGCGCA	1 cut(s)	1964
NspI	RCATGY	3 cut(s)	706, 1163, 1245
OliI	CACNNNNGTG	1 cut(s)	1634
PaeI	GCATGC	1 cut(s)	706
PagI	TCATGA	3 cut(s)	2013, 2568, 2706
PaqCI	CACCTGC	1 cut(s)	1740
PciI	ACATGT	1 cut(s)	1159
PciSI	GCTCTTC	2 cut(s)	173, 2570
PctI	GAATGC	4 cut(s)	114, 405, 1662, 2310
PdmI	GAANNNNTTC	4 cut(s)	872, 2082, 2413, 2454
PfoI	TCCNGGA	1 cut(s)	32
PkrI	GCNGC	8 cut(s)	170, 338, 625, 701, 1109, 2494, 2750, 2760
PleI	GAGTC	2 cut(s)	1135, 1893
PpsI	GAGTC	2 cut(s)	1135, 1893
Ppu21I	YACGTR	1 cut(s)	988
PpuMI	RGGWCCY	2 cut(s)	27, 2007
PscI	ACATGT	1 cut(s)	1159
PshAI	GACNNNNGTC	1 cut(s)	2005
Psp124BI	GAGCTC	1 cut(s)	2228
Psp5II	RGGWCCY	2 cut(s)	27, 2007
Psp6I	CCWGG	3 cut(s)	1313, 2167, 2477
PspGI	CCWGG	3 cut(s)	1313, 2167, 2477
PspN4I	GGNNCC	4 cut(s)	1044, 1396, 2682, 2762
PspPI	GGNCC	5 cut(s)	27, 87, 978, 1033, 2007
PspPPI	RGGWCCY	2 cut(s)	27, 2007
PstI	CTGCAG	1 cut(s)	170
PsuI	RGATCY	2 cut(s)	1394, 2680
PvuII	CAGCTG	1 cut(s)	1552
RruI	TCGCGA	1 cut(s)	2504
RsaI	GTAC	6 cut(s)	431, 833, 1556, 1725, 2337, 2693
RsaNI	GTAC	6 cut(s)	430, 832, 1555, 1724, 2336, 2692
RseI	CAYNNNNRTG	1 cut(s)	1634
SacI	GAGCTC	1 cut(s)	2228
SapI	GCTCTTC	2 cut(s)	173, 2570
SatI	GCNGC	8 cut(s)	169, 337, 624, 700, 1108, 2493, 2749, 2759
Sau3AI	GATC	8 cut(s)	231, 290, 453, 1394, 1518, 1854, 2680, 2733
Sau96I	GGNCC	5 cut(s)	27, 87, 978, 1033, 2007
SchI	GAGTC	2 cut(s)	1135, 1894
ScrFI	CCNGG	4 cut(s)	34, 1315, 2169, 2479
SduI	GDGCHC	5 cut(s)	247, 308, 1047, 2160, 2228
SfcI	CTRYAG	3 cut(s)	166, 1097, 2073
SinI	GGWCC	4 cut(s)	27, 978, 1033, 2007
SmiMI	CAYNNNNRTG	1 cut(s)	1634
SmlI	CTYRAG	2 cut(s)	601, 2050
SmoI	CTYRAG	2 cut(s)	601, 2050
SnaBI	TACGTA	1 cut(s)	988
SphI	GCATGC	1 cut(s)	706
SsiI	CCGC	6 cut(s)	536, 624, 918, 1714, 2061, 2758
SspI	AATATT	1 cut(s)	1230
SspMI	CTAG	7 cut(s)	14, 577, 607, 1079, 1687, 1954, 2510
SstI	GAGCTC	1 cut(s)	2228
StyD4I	CCNGG	4 cut(s)	32, 1313, 2167, 2477
StyI	CCWWGG	2 cut(s)	1219, 2003
TaiI	ACGT	3 cut(s)	990, 2256, 2383
TaqI	TCGA	1 cut(s)	2292
TatI	WGTACW	4 cut(s)	831, 1554, 1723, 2335
TauI	GCSGC	2 cut(s)	626, 2761
TscAI	CASTG	6 cut(s)	819, 1707, 2160, 2214, 2424, 2502
TseFI	GTSAC	1 cut(s)	948
TseI	GCWGC	6 cut(s)	168, 336, 699, 1107, 2492, 2748
Tsp45I	GTSAC	1 cut(s)	948
TspGWI	ACGGA	1 cut(s)	1984
TspRI	CASTG	6 cut(s)	819, 1707, 2160, 2214, 2424, 2502
Vha464I	CTTAAG	1 cut(s)	601
VpaK11BI	GGWCC	4 cut(s)	27, 978, 1033, 2007
XapI	RAATTY	1 cut(s)	136
XceI	RCATGY	3 cut(s)	706, 1163, 1245
XmiI	GTMKAC	2 cut(s)	377, 1415
XmnI	GAANNNNTTC	4 cut(s)	872, 2082, 2413, 2454
XspI	CTAG	7 cut(s)	14, 577, 607, 1079, 1687, 1954, 2510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.