AT5G62410

Structural maintenance of chromosomes

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
25056025 .. 25062670
6646 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G62410.1

Sequence Viewer

Length: 3528 bp
ATGCATATAAAGGAGATATGCTTGGAGGGTTTTAAATCATACGCGACGAGGACGGTGGTTTCTGGTTTCGATCCACATTTCAACGCGATAACGGGTCTGAATGGTTCGGGAAAATCCAACATCCTCGATTCCATCTGTTTCGTTCTGGGTATCACCAATCTTCAGCAAGTTCGAGCTGCTAATCTTCAGGAACTCGTCTATAAGCAAGGCCAAGCTGGGATTACTAAGGCGACTGTCTCGGTTACCTTTGACAATTCCGAGAGACACAGAAGCCCTCTCGGCTACGAAGAACATCCAGAGATTACTGTGACTAGACAAATTGTAGTTGGTGGAAGGAACAAGTATTTGATAAATGGGAAGCTAGCACAACCAAGTCAAGTTCAGAATCTATTTCACTCGGTGCAGCTTAATGTCAACAATCCACACTTTCTCATCATGCAAGGGCGTATCACCAAAGTTTTGAATATGAAGCCTCCGGAGATATTGTCCATGCTTGAAGAAGCTGCTGGAACAAGGATGTATGAAAACAAGAAAGAGGCTGCATTGAAAACGCTTGAAAAAAAGCAGACCAAGGTTGATGAGATTAATAAGCTTCTTGATCATGAAATATTGCCGGCTCTCGAGAAGTTGAGGAAAGAAAAATCACAGTACATGCAGTGGGCTAATGGTAACGCGGAGCTAGATCGACTAAGGAGATTCTGTATTGCCTTTGAATATGTTCAAGCGGAGAAGATTAGAGACAATGCTGTTCTTGGAGTTGGAGAAATGAAGGCGAAGCTCGGGAAGATTGACGCGGAAACAGAAAAGACACAGGAAGAAATACAGGAATTTGAGAAACAGATAAAAGCTCTGACTCAGGCAAAGGAAGCCAGTATGGGGGGAGAAGTAAAAACTCTGTCAGAAAAAGTGGATTCACTGGCTCAAGAAATGACACGTGAGTCATCTAAACTTAATAACAAGGAGGACACCCTTCTGGGAGAAAAAGAGAATGTTGAAAAGATTGTTCACAGTATAGAAGATTTAAAGAAATCCGTAAAGGAGAGAGCCGCTGCTGTGAAGAAGTCTGAGGAAGGAGCGGCAGACCTAAAACAAAGATTCCAGGAACTCTCCACCACATTGGAAGAGTGTGAAAAGGAACACCAGGGCGTACTAGCTGGTAAGAGTAGTGGAGATGAAGAGAAATGCTTAGAAGATCAACTACGGGATGCAAAGATTGCTGTTGGAACAGCTGGAACAGAGTTGAAACAGCTAAAAACCAAAATAGAACACTGTGAAAAGGAGCTAAAGGAGAGAAAGTCTCAGTTAATGTCAAAACTTGAAGAAGCCATTGAAGTGGAGAATGAACTTGGAGCTAGGAAAAATGATGTGGAACATGTAAAAAAGGCACTTGAATCTATTCCTTATAACGAGGGTCAAATGGAAGCTTTGGAGAAGGACCGTGGAGCCGAACTTGAAGTTGTGCAGAGGCTGGAAGATAAAGTGCGTGGCTTATCAGCTCAATTAGCAAATTTTCAGTTTACATACAGCGATCCTGTGAGGAACTTTGACCGATCTAAGGTGAAAGGTGTGGTCGCAAAACTAATAAAAGTAAAAGATAGGTCCTCAATGACAGCGTTGGAGGTTACTGCTGGTGGCAAGTTGTATGATGTTGTTGTAGACTCAGAAGATACTGGAAAACAGCTCCTTCAAAACGGTGCTCTTAGGAGAAGAGTTACAATTATACCTCTGAACAAAATCCAATCTTACGTTGTTCAGCCTAGAGTGCAGCAAGCGACTGCTAGATTGGTTGGAAAGGATAATGCAGAACTGGCACTTTCCTTAGTCGGTTATAGTGATGAATTAAAGAATGCCATGGAATATGTTTTTGGCTCCACTTTTGTTTGCAAAACTACTGATGTAGCAAAGGAAGTTGCTTTTAATCGGGATATTCGGACTCCAAGTGTCACACTTGAAGGTGACATTTTCCAGCCAAGTGGTCTTCTTACTGGTGGGAGTCGCAAGGGTGGAGGTGATCGCCTTAGGAAACTTCATGACCTGGCAGAAGCTGAATCAGAATTACAAGGACACCAAAAAAGGTTGGCTGACGTTGAATCACAGATCAAAGAGCTTCAGCCTCTTCAAATGAAATTCACAGATGTTTATGCACAGTTGGAGCTGAAGACGTATGACTTGTCCTTATTTTTGAAGAGGGCTGAACAAAATGAGCATCACAAGCTTGGCGAAGCTGTAAAAAAACTTGAAGAAGAGCTTGAAGAAGCGAAATCCCAAATCAAAGAGAAGGAACTTGCTTATAAAAATTGTTTTGATGCTGTTTCCAAACTAGAGAATTCCATCAAAGACCATGACAAAAACAGAGAAGGAAGACTTAAGGACTTGGAAAAAAATATTAAAACCATCAAAGCTCAAATGCAGGCAGCTTCCAAAGATTTAAAGAGTCATGAAAATGAAAAAGAGAAGCTTGTGATGGAGGAAGAAGCAATGAAGCAAGAACAATCGTCCTTGGAGAGCCACTTAACTTCATTGGAAACCCAAATCAGCACTCTGACTTCGGAAGTAGACGAGCAGCGAGCCAAGGTTGATGCCTTACAGAAGATTCATGATGAGTCTCTTGCCGAGCTCAAGTTGATACATGCAAAGATGAAGGAATGTGATACACAGATAAGTGGTTTTGTCACTGACCAGGAAAAGTGTCTGCAGAAGCTTAGTGACATGAAGCTTGAGAGAAAGAAATTGGAAAATGAGGTCGTAAGGATGGAAACGGATCACAAGGACTGTTCCGTGAAAGTAGACAAACTTGTTGAGAAGCATACATGGATAGCATCTGAAAAGCAACTTTTTGGGAAAGGAGGGACAGATTATGATTTTGAATCTTGTGATCCGTATGTGGCCAGAGAAAAACTTGAAAAGCTCCAATCAGATCAATCAGGCTTGGAAAAAAGAGTGAACAAGAAGGTTATGGCTATGTTTGAGAAAGCAGAAGATGAATACAATGCTCTGATATCGAAAAAAAATACTATCGAGAATGACAAATCAAAAATCACGAAAGTGATCGAGGAGCTTGATGAGAAGAAAAAAGAAACCCTGAAAGTTACTTGGGTTAAAGTTAACCAGGATTTCGGATCAATCTTTTCAACTCTACTACCTGGCACCATGGCAAAACTAGAACCTCCTGAAGACGGTAACTTCCTTGATGGTCTTGAGGTGCGTGTTGCCTTTGGAAAAGTCTGGAAGCAGTCTTTATCAGAACTCAGTGGAGGGCAAAGATCTCTTCTTGCGCTATCACTAATATTGGCATTGCTTCTCTTCAAACCGGCTCCTCTTTATATATTAGATGAGGTTGATGCAGCTCTTGATCTCAGTCACACACAGAACATAGGAAGAATGATAAGAGCTCATTTCCCTCACTCGCAGTTTATCGTGGTTTCGCTGAAAGAAGGAATGTTCAACAATGCCAATGTTCTTTTCCGGACAAAGTTCGTTGATGGAGTTTCAACAGTCCAAAGGACAGTAACAAAGCAGACCAAGTGA

Protein Analysis

1175

Amino Acids

132.6

Weight (kDa)

6.3

Isoelectric Point (pI)

35.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SMC_N PF02463 2 - 1161 6.1e-68 RecF/RecN/SMC N terminal domain
KIF9 PF23735 334 - 440 3e-06 Kinesin-like protein KIF9 domain
SMC_hinge PF06470 518 - 638 1.1e-22 SMC proteins Flexible Hinge Domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1404, 2292
AasI GACNNNNNNGTC 1 cut(s) 937
AccB1I GGYRCC 1 cut(s) 3146
AccBSI CCGCTC 1 cut(s) 1076
AccI GTMKAC 3 cut(s) 1656, 2556, 2787
AccII CGCG 4 cut(s) 44, 86, 674, 794
AccIII TCCGGA 2 cut(s) 475, 3465
AciI CCGC 5 cut(s) 674, 725, 794, 1047, 1076
AclWI GGATC 5 cut(s) 65, 1523, 2769, 2870, 3127
AcoI YGGCCR 1 cut(s) 2886
AcsI RAATTY 4 cut(s) 827, 1507, 2126, 2326
AcuI CTGAAG 5 cut(s) 146, 170, 2093, 2177, 3192
AcvI CACGTG 1 cut(s) 935
AdeI CACNNNGTG 1 cut(s) 400
AfaI GTAC 2 cut(s) 650, 1149
AfiI CCNNNNNNNGG 3 cut(s) 876, 1555, 3176
AflII CTTAAG 1 cut(s) 2366
AflIII ACRYGT 2 cut(s) 932, 1372
AjnI CCWGG 6 cut(s) 1098, 1140, 2034, 2679, 3108, 3142
AjuI GAANNNNNNNTTGG 4 cut(s) 1848, 1880, 3446, 3478
AleI CACNNNNGTG 1 cut(s) 3044
Alw21I GWGCWC 3 cut(s) 1699, 2619, 3394
Alw26I GTCTC 5 cut(s) 241, 256, 732, 1302, 2610
AlwI GGATC 5 cut(s) 65, 1523, 2769, 2870, 3127
AlwNI CAGNNNCTG 2 cut(s) 1468, 2045
Ama87I CYCGRG 2 cut(s) 620, 779
Aor13HI TCCGGA 2 cut(s) 475, 3465
AoxI GGCC 2 cut(s) 208, 2886
ApeKI GCWGC 9 cut(s) 176, 403, 503, 539, 1049, 1765, 2414, 2563, 3344
ApoI RAATTY 4 cut(s) 827, 1507, 2126, 2326
AseI ATTAAT 1 cut(s) 585
Asp700I GAANNNNTTC 2 cut(s) 717, 1395
AspLEI GCGC 1 cut(s) 3277
AspS9I GGNCC 2 cut(s) 1435, 1599
AsuHPI GGTGA 5 cut(s) 145, 442, 1570, 1967, 2021
AsuNHI GCTAGC 1 cut(s) 361
AvaI CYCGRG 2 cut(s) 620, 779
AvaII GGWCC 2 cut(s) 1435, 1599
AxyI CCTNAGG 1 cut(s) 2018
BalI TGGCCA 1 cut(s) 2888
BanI GGYRCC 1 cut(s) 3146
BanII GRGCYC 2 cut(s) 2619, 3394
BarI GAAGNNNNNNTAC 2 cut(s) 1182, 1214
BbrPI CACGTG 1 cut(s) 935
BbsI GAAGAC 4 cut(s) 1970, 2165, 2368, 3180
Bbv12I GWGCWC 3 cut(s) 1699, 2619, 3394
BbvI GCAGC 9 cut(s) 163, 415, 490, 526, 1036, 1777, 2426, 2575, 3356
BccI CCATC 7 cut(s) 140, 2339, 2402, 2458, 2746, 3185, 3476
BciT130I CCWGG 6 cut(s) 1100, 1142, 2036, 2681, 3110, 3144
BclI TGATCA 1 cut(s) 598
BcoDI GTCTC 5 cut(s) 241, 256, 732, 1302, 2610
BfaI CTAG 9 cut(s) 312, 362, 680, 1151, 1353, 1758, 1779, 2321, 3161
BfmI CTRYAG 1 cut(s) 2693
BfrI CTTAAG 1 cut(s) 2366
BglI GCCNNNNNGGC 1 cut(s) 279
BglII AGATCT 1 cut(s) 3263
Bme1390I CCNGG 6 cut(s) 1100, 1142, 2036, 2681, 3110, 3144
Bme18I GGWCC 2 cut(s) 1435, 1599
BmeT110I CYCGRG 2 cut(s) 620, 779
BmgT120I GGNCC 2 cut(s) 1435, 1599
BmiI GGNNCC 4 cut(s) 1444, 1870, 3148, 3315
BmrFI CCNGG 6 cut(s) 1100, 1142, 2036, 2681, 3110, 3144
BmsI GCATC 6 cut(s) 1195, 2215, 2296, 2569, 2828, 3331
BmtI GCTAGC 1 cut(s) 365
BpiI GAAGAC 4 cut(s) 1970, 2165, 2368, 3180
BplI GAGNNNNNCTC 2 cut(s) 1282, 1314
BpuEI CTTGAG 4 cut(s) 906, 2603, 2738, 3218
BsaAI YACGTR 1 cut(s) 935
BsaJI CCNNGG 7 cut(s) 570, 1141, 1438, 1851, 2499, 2571, 3150
BsaWI WCCGGW 2 cut(s) 475, 3465
BsaXI ACNNNNNCTCC 6 cut(s) 470, 500, 685, 715, 1280, 1310
Bsc4I CCNNNNNNNGG 3 cut(s) 876, 1555, 3176
Bse118I RCCGGY 2 cut(s) 613, 3310
Bse1I ACTGG 5 cut(s) 870, 921, 1675, 1812, 1990
Bse21I CCTNAGG 1 cut(s) 2018
Bse3DI GCAATG 2 cut(s) 2484, 3293
BseAI TCCGGA 2 cut(s) 475, 3465
BseBI CCWGG 6 cut(s) 1100, 1142, 2036, 2681, 3110, 3144
BseDI CCNNGG 7 cut(s) 570, 1141, 1438, 1851, 2499, 2571, 3150
BseGI GGATG 5 cut(s) 120, 292, 522, 1210, 2757
BseLI CCNNNNNNNGG 3 cut(s) 876, 1555, 3176
BseMI GCAATG 2 cut(s) 2484, 3293
BseMII CTCAG 6 cut(s) 869, 1056, 1313, 1674, 3262, 3370
BseNI ACTGG 5 cut(s) 870, 921, 1675, 1812, 1990
BseRI GAGGAG 2 cut(s) 3068, 3306
BseXI GCAGC 9 cut(s) 163, 415, 490, 526, 1036, 1777, 2426, 2575, 3356
BseYI CCCAGC 1 cut(s) 215
BsgI GTGCAG 3 cut(s) 422, 1481, 1784
Bsh1236I CGCG 4 cut(s) 44, 86, 674, 794
BshFI GGCC 2 cut(s) 210, 2888
BshNI GGYRCC 1 cut(s) 3146
BsiHKAI GWGCWC 3 cut(s) 1699, 2619, 3394
BsiHKCI CYCGRG 2 cut(s) 620, 779
BsiSI CCGG 4 cut(s) 476, 614, 3311, 3466
BslFI GGGAC 1 cut(s) 2863
BslI CCNNNNNNNGG 3 cut(s) 876, 1555, 3176
BsmAI GTCTC 5 cut(s) 241, 256, 732, 1302, 2610
BsmFI GGGAC 1 cut(s) 2863
BsmI GAATGC 1 cut(s) 1852
BsnI GGCC 2 cut(s) 210, 2888
BsoBI CYCGRG 2 cut(s) 620, 779
Bsp1286I GDGCHC 3 cut(s) 1699, 2619, 3394
Bsp13I TCCGGA 2 cut(s) 475, 3465
Bsp19I CCATGG 2 cut(s) 1851, 3150
BspACI CCGC 5 cut(s) 674, 725, 794, 1047, 1076
BspANI GGCC 2 cut(s) 210, 2888
BspCNI CTCAG 6 cut(s) 868, 1057, 1312, 1673, 3261, 3369
BspEI TCCGGA 2 cut(s) 475, 3465
BspFNI CGCG 4 cut(s) 44, 86, 674, 794
BspHI TCATGA 4 cut(s) 601, 2029, 2437, 2596
BspLI GGNNCC 4 cut(s) 1444, 1870, 3148, 3315
BspMAI CTGCAG 1 cut(s) 2697
BspOI GCTAGC 1 cut(s) 365
BspPI GGATC 5 cut(s) 65, 1523, 2769, 2870, 3127
BspQI GCTCTTC 1 cut(s) 2238
BspT107I GGYRCC 1 cut(s) 3146
BspTI CTTAAG 1 cut(s) 2366
BsrBI CCGCTC 1 cut(s) 1076
BsrDI GCAATG 2 cut(s) 2484, 3293
BsrFI RCCGGY 2 cut(s) 613, 3310
BsrI ACTGG 5 cut(s) 870, 921, 1675, 1812, 1990
BssAI RCCGGY 2 cut(s) 613, 3310
BssECI CCNNGG 7 cut(s) 570, 1141, 1438, 1851, 2499, 2571, 3150
BssT1I CCWWGG 5 cut(s) 570, 1851, 2499, 2571, 3150
Bst2UI CCWGG 6 cut(s) 1100, 1142, 2036, 2681, 3110, 3144
Bst6I CTCTTC 8 cut(s) 1116, 1170, 1702, 2121, 2180, 2238, 3273, 3308
BstAFI CTTAAG 1 cut(s) 2366
BstAPI GCANNNNNTGC 1 cut(s) 1214
BstBAI YACGTR 1 cut(s) 935
BstC8I GCNNGC 5 cut(s) 363, 615, 1770, 2412, 2568
BstDSI CCRYGG 3 cut(s) 1438, 1851, 3150
BstEII GGTNACC 1 cut(s) 241
BstF5I GGATG 5 cut(s) 120, 292, 522, 1210, 2757
BstFNI CGCG 4 cut(s) 44, 86, 674, 794
BstHHI GCGC 1 cut(s) 3277
BstMAI GTCTC 5 cut(s) 241, 256, 732, 1302, 2610
BstMWI GCNNNNNNNGC 7 cut(s) 279, 866, 1214, 1502, 1762, 1808, 2212
BstNI CCWGG 6 cut(s) 1100, 1142, 2036, 2681, 3110, 3144
BstNSI RCATGY 3 cut(s) 655, 1376, 2633
BstPI GGTNACC 1 cut(s) 241
BstSCI CCNGG 6 cut(s) 1098, 1140, 2034, 2679, 3108, 3142
BstSFI CTRYAG 1 cut(s) 2693
BstUI CGCG 4 cut(s) 44, 86, 674, 794
BstV1I GCAGC 9 cut(s) 163, 415, 490, 526, 1036, 1777, 2426, 2575, 3356
BstV2I GAAGAC 4 cut(s) 1970, 2165, 2368, 3180
BstX2I RGATCY 1 cut(s) 3263
BstXI CCANNNNNNTGG 3 cut(s) 1117, 1333, 1973
BstYI RGATCY 1 cut(s) 3263
Bsu36I CCTNAGG 1 cut(s) 2018
BsuRI GGCC 2 cut(s) 210, 2888
BtgI CCRYGG 3 cut(s) 1438, 1851, 3150
BtsCI GGATG 5 cut(s) 120, 292, 522, 1210, 2757
BtsI GCAGTG 1 cut(s) 662
BtsIMutI CAGTG 5 cut(s) 662, 914, 1267, 2673, 3256
Cac8I GCNNGC 5 cut(s) 363, 615, 1770, 2412, 2568
CaiI CAGNNNCTG 2 cut(s) 1468, 2045
CciI TCATGA 4 cut(s) 601, 2029, 2437, 2596
CfoI GCGC 1 cut(s) 3277
Cfr10I RCCGGY 2 cut(s) 613, 3310
Cfr13I GGNCC 2 cut(s) 1435, 1599
CseI GACGC 1 cut(s) 800
Csp6I GTAC 2 cut(s) 649, 1148
CviQI GTAC 2 cut(s) 649, 1148
DraI TTTAAA 3 cut(s) 34, 1023, 2430
DraIII CACNNNGTG 1 cut(s) 400
DrdI GACNNNNNNGTC 1 cut(s) 937
DseDI GACNNNNNNGTC 1 cut(s) 937
EaeI YGGCCR 1 cut(s) 2886
Eam1104I CTCTTC 8 cut(s) 1116, 1170, 1702, 2121, 2180, 2238, 3273, 3308
EarI CTCTTC 8 cut(s) 1116, 1170, 1702, 2121, 2180, 2238, 3273, 3308
Ecl136II GAGCTC 2 cut(s) 2617, 3392
Eco130I CCWWGG 5 cut(s) 570, 1851, 2499, 2571, 3150
Eco24I GRGCYC 2 cut(s) 2619, 3394
Eco32I GATATC 1 cut(s) 3000
Eco47I GGWCC 2 cut(s) 1435, 1599
Eco53kI GAGCTC 2 cut(s) 2617, 3392
Eco57I CTGAAG 5 cut(s) 146, 170, 2093, 2177, 3192
Eco72I CACGTG 1 cut(s) 935
Eco81I CCTNAGG 1 cut(s) 2018
Eco88I CYCGRG 2 cut(s) 620, 779
Eco91I GGTNACC 1 cut(s) 241
EcoICRI GAGCTC 2 cut(s) 2617, 3392
EcoO109I RGGNCCY 1 cut(s) 1599
EcoO65I GGTNACC 1 cut(s) 241
EcoRI GAATTC 1 cut(s) 2326
EcoRII CCWGG 6 cut(s) 1098, 1140, 2034, 2679, 3108, 3142
EcoRV GATATC 1 cut(s) 3000
EcoT14I CCWWGG 5 cut(s) 570, 1851, 2499, 2571, 3150
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 2 cut(s) 2619, 3394
ErhI CCWWGG 5 cut(s) 570, 1851, 2499, 2571, 3150
FalI AAGNNNNNCTT 6 cut(s) 2232, 2264, 2349, 2381, 2442, 2474
FaqI GGGAC 1 cut(s) 2863
FbaI TGATCA 1 cut(s) 598
FblI GTMKAC 3 cut(s) 1656, 2556, 2787
FokI GGATG 5 cut(s) 107, 279, 529, 1217, 2764
FriOI GRGCYC 2 cut(s) 2619, 3394
FspBI CTAG 9 cut(s) 312, 362, 680, 1151, 1353, 1758, 1779, 2321, 3161
GlaI GCGC 1 cut(s) 3276
GsaI CCCAGC 1 cut(s) 219
HaeIII GGCC 2 cut(s) 210, 2888
HapII CCGG 4 cut(s) 476, 614, 3311, 3466
HgaI GACGC 1 cut(s) 800
HhaI GCGC 1 cut(s) 3277
Hin6I GCGC 1 cut(s) 3275
HinP1I GCGC 1 cut(s) 3275
HincII GTYRAC 2 cut(s) 415, 3106
HindII GTYRAC 2 cut(s) 415, 3106
HindIII AAGCTT 6 cut(s) 590, 1422, 2213, 2456, 2699, 2714
HpaI GTTAAC 1 cut(s) 3106
HpaII CCGG 4 cut(s) 476, 614, 3311, 3466
HphI GGTGA 5 cut(s) 145, 442, 1570, 1967, 2021
Hpy166II GTNNAC 8 cut(s) 415, 1006, 1518, 1657, 2557, 2788, 2944, 3106
Hpy8I GTNNAC 8 cut(s) 415, 1006, 1518, 1657, 2557, 2788, 2944, 3106
Hpy99I CGWCG 1 cut(s) 49
HpyCH4IV ACGT 4 cut(s) 934, 1746, 2085, 2162
HpyF10VI GCNNNNNNNGC 7 cut(s) 279, 866, 1214, 1502, 1762, 1808, 2212
HpySE526I ACGT 4 cut(s) 934, 1746, 2085, 2162
HspAI GCGC 1 cut(s) 3275
Kpn2I TCCGGA 2 cut(s) 475, 3465
KroI GCCGGC 1 cut(s) 613
KroNI GCCGGC 1 cut(s) 615
Ksp22I TGATCA 1 cut(s) 598
KspAI GTTAAC 1 cut(s) 3106
LguI GCTCTTC 1 cut(s) 2238
Lsp1109I GCAGC 9 cut(s) 163, 415, 490, 526, 1036, 1777, 2426, 2575, 3356
LweI GCATC 6 cut(s) 1195, 2215, 2296, 2569, 2828, 3331
MaeI CTAG 9 cut(s) 312, 362, 680, 1151, 1353, 1758, 1779, 2321, 3161
MaeII ACGT 4 cut(s) 934, 1746, 2085, 2162
MbiI CCGCTC 1 cut(s) 1076
MflI RGATCY 1 cut(s) 3263
MhlI GDGCHC 3 cut(s) 1699, 2619, 3394
MlsI TGGCCA 1 cut(s) 2888
MluNI TGGCCA 1 cut(s) 2888
MlyI GAGTC 7 cut(s) 847, 947, 1652, 1927, 2002, 2443, 2612
MmeI TCCRAC 6 cut(s) 141, 739, 1201, 1596, 1768, 2130
Mox20I TGGCCA 1 cut(s) 2888
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 2 cut(s) 475, 3465
MroNI GCCGGC 1 cut(s) 613
MroXI GAANNNNTTC 2 cut(s) 717, 1395
MscI TGGCCA 1 cut(s) 2888
MslI CAYNNNNRTG 3 cut(s) 1331, 2442, 3044
Msp20I TGGCCA 1 cut(s) 2888
MspA1I CMGCKG 2 cut(s) 1049, 1229
MspCI CTTAAG 1 cut(s) 2366
MspI CCGG 4 cut(s) 476, 614, 3311, 3466
MspR9I CCNGG 6 cut(s) 1100, 1142, 2036, 2681, 3110, 3144
Mva1269I GAATGC 1 cut(s) 1852
MvaI CCWGG 6 cut(s) 1100, 1142, 2036, 2681, 3110, 3144
MvnI CGCG 4 cut(s) 44, 86, 674, 794
MwoI GCNNNNNNNGC 7 cut(s) 279, 866, 1214, 1502, 1762, 1808, 2212
NaeI GCCGGC 1 cut(s) 615
NcoI CCATGG 2 cut(s) 1851, 3150
NgoMIV GCCGGC 1 cut(s) 613
NheI GCTAGC 1 cut(s) 361
NlaIV GGNNCC 4 cut(s) 1444, 1870, 3148, 3315
NmeAIII GCCGAG 2 cut(s) 258, 2638
NmuCI GTSAC 6 cut(s) 307, 1942, 1955, 2671, 2705, 3359
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 3 cut(s) 655, 1376, 2633
OliI CACNNNNGTG 1 cut(s) 3044
PaeR7I CTCGAG 1 cut(s) 620
PagI TCATGA 4 cut(s) 601, 2029, 2437, 2596
PciI ACATGT 1 cut(s) 1372
PciSI GCTCTTC 1 cut(s) 2238
PctI GAATGC 1 cut(s) 1852
PdiI GCCGGC 1 cut(s) 615
PdmI GAANNNNTTC 2 cut(s) 717, 1395
PfoI TCCNGGA 1 cut(s) 1098
PleI GAGTC 7 cut(s) 847, 946, 1652, 1927, 2001, 2442, 2611
PmaCI CACGTG 1 cut(s) 935
PmlI CACGTG 1 cut(s) 935
PpsI GAGTC 7 cut(s) 847, 946, 1652, 1927, 2001, 2442, 2611
Ppu21I YACGTR 1 cut(s) 935
PpuMI RGGWCCY 1 cut(s) 1599
PscI ACATGT 1 cut(s) 1372
PshBI ATTAAT 1 cut(s) 585
PsiI TTATAA 2 cut(s) 1404, 2292
Psp124BI GAGCTC 2 cut(s) 2619, 3394
Psp5II RGGWCCY 1 cut(s) 1599
Psp6I CCWGG 6 cut(s) 1098, 1140, 2034, 2679, 3108, 3142
PspCI CACGTG 1 cut(s) 935
PspEI GGTNACC 1 cut(s) 241
PspFI CCCAGC 1 cut(s) 215
PspGI CCWGG 6 cut(s) 1098, 1140, 2034, 2679, 3108, 3142
PspN4I GGNNCC 4 cut(s) 1444, 1870, 3148, 3315
PspPI GGNCC 2 cut(s) 1435, 1599
PspPPI RGGWCCY 1 cut(s) 1599
PstI CTGCAG 1 cut(s) 2697
PstNI CAGNNNCTG 2 cut(s) 1468, 2045
PsuI RGATCY 1 cut(s) 3263
PvuII CAGCTG 1 cut(s) 1229
RsaI GTAC 2 cut(s) 650, 1149
RsaNI GTAC 2 cut(s) 649, 1148
RseI CAYNNNNRTG 3 cut(s) 1331, 2442, 3044
SacI GAGCTC 2 cut(s) 2619, 3394
SapI GCTCTTC 1 cut(s) 2238
Sau96I GGNCC 2 cut(s) 1435, 1599
SchI GAGTC 7 cut(s) 847, 947, 1652, 1927, 2002, 2443, 2612
ScrFI CCNGG 6 cut(s) 1100, 1142, 2036, 2681, 3110, 3144
SduI GDGCHC 3 cut(s) 1699, 2619, 3394
SfaNI GCATC 6 cut(s) 1195, 2215, 2296, 2569, 2828, 3331
SfcI CTRYAG 1 cut(s) 2693
Sfr274I CTCGAG 1 cut(s) 620
SinI GGWCC 2 cut(s) 1435, 1599
SlaI CTCGAG 1 cut(s) 620
SmiMI CAYNNNNRTG 3 cut(s) 1331, 2442, 3044
SmlI CTYRAG 6 cut(s) 620, 921, 2366, 2618, 2717, 3197
SmoI CTYRAG 6 cut(s) 620, 921, 2366, 2618, 2717, 3197
SsiI CCGC 5 cut(s) 674, 725, 794, 1047, 1076
SspI AATATT 3 cut(s) 609, 2386, 3288
SspMI CTAG 9 cut(s) 312, 362, 680, 1151, 1353, 1758, 1779, 2321, 3161
SstI GAGCTC 2 cut(s) 2619, 3394
StyD4I CCNGG 6 cut(s) 1098, 1140, 2034, 2679, 3108, 3142
StyI CCWWGG 5 cut(s) 570, 1851, 2499, 2571, 3150
TaiI ACGT 4 cut(s) 937, 1749, 2088, 2165
TaqI TCGA 8 cut(s) 69, 126, 172, 621, 685, 3002, 3018, 3051
TaqII GACCGA 1 cut(s) 1563
TatI WGTACW 1 cut(s) 648
TauI GCSGC 2 cut(s) 1049, 1079
TscAI CASTG 5 cut(s) 662, 921, 1274, 2680, 3256
TseFI GTSAC 6 cut(s) 307, 1942, 1955, 2671, 2705, 3359
TseI GCWGC 9 cut(s) 176, 403, 503, 539, 1049, 1765, 2414, 2563, 3344
Tsp45I GTSAC 6 cut(s) 307, 1942, 1955, 2671, 2705, 3359
TspGWI ACGGA 4 cut(s) 1021, 2767, 2774, 2868
TspRI CASTG 5 cut(s) 662, 921, 1274, 2680, 3256
Vha464I CTTAAG 1 cut(s) 2366
VpaK11BI GGWCC 2 cut(s) 1435, 1599
VspI ATTAAT 1 cut(s) 585
XapI RAATTY 4 cut(s) 827, 1507, 2126, 2326
XceI RCATGY 3 cut(s) 655, 1376, 2633
XhoI CTCGAG 1 cut(s) 620
XmiI GTMKAC 3 cut(s) 1656, 2556, 2787
XmnI GAANNNNTTC 2 cut(s) 717, 1395
XspI CTAG 9 cut(s) 312, 362, 680, 1151, 1353, 1758, 1779, 2321, 3161
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.