Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0003832

Physical Location & Seq

Genomic Coordinates Reverse (-)

27787712 .. 27795112

Gene Structure 7401 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G276400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3528 bp

ATGTACATCAAGGAGATATGCTTGGAGGGGTTCAAGTCGTACGCGACGAGGACGGTGGTGCCCGGGTTCGACCCGTTTTTCAACGCCATAACGGGTCTGAACGGGTCGGGCAAATCCAACATCCTCGACTCCATATGCTTCGTCTTGGGCATCACCAATTTGCAGCAAGTCCGGGCTGCCAATCTCCAAGAGCTCGTCTACAAGCAAGGCCAGGCCGGCATTACAAAGGCCACCGTCTCCATCATCTTCGACAATTCCGACCGCTCCCGCAGTCCCCTCGGCTACGAGGCCCATCCCGAAATCACAGTCACCCGTCAGATTGTGGTTGGTGGAAGGAACAAGTACTTGATCAATGGCAAACTTGCGCAGCCTAGTCAGGTCCAGAACCTTTTTCATTCGGTGCAGCTCAATGTTAACAACCCGCATTTTCTTATAATGCAAGGGCGCATTACCAAGGTTTTAAATATGAAACCCCCCGAGATTCTGTCCATGCTTGAAGAGGCTGCTGGGACAAGAATGTATGAGACCAAGAAAGAGGCGGCTTTGAAGACACTTGAGAAGAAACAGAGCAAAGTCGATGAGATCAATAACCTTCTTGACCAGGAGATACTGCCTGCCTTGGACAAGTTGAGGAGAGAAAGGACACAGTACATGCAATGGGCTAATGGAAATGCTGACTTGGATCGGCTTAAAAGGTTTTGCATTGCATATGAATATGTTCAAGCGGAGAGGATTAGAGACAGTGCAGTGTGTGAGGTGGAGCAGGTGAAGGCCAGAATTTCTGAGGTCGACGATGATACGAGAAAGACACAGGAAGAAATACAAGAAATGGAAGCACAAGTGTCTAAGTTAACAGCTGAAAAGGAGGCTAGAATGGGTGGAGAAGTAAAAACTTTGTCTGACAAAGTAGATGCACTTTCTCAAAATCTTGTGAGGGAAGTGTCTGTACTGAATAATAAAGAGGACACTCTGGGGACTGAAAAGGAAAATGCTGAAAAGATTGTCAGCAATATTGAAGACATGAAGCAGTCTGCAAAAGAGACGGACTTCGCTATAAAAAAAGCTGATGAAGGTGCGGCTGATTTGAAAAAGAGAGCAGGGGAACTTTCTCAGAGTCTGAATGAGTATGAAAAGGAGTACCAGGGCATACTAGCTGGAAAGAGTAGTGGAAATGATGAGAAATGCCTTGAAGATCAATTGGGTGATGCCAAAATAGCTGTTGGGAGTGCTGAAACAGAGTTGAAGCAGCTGAAAACAAAAATAAGCCACTGTCAAAGGGAGTTGAAAGAGAAAAATAATCAGCTAATGTCAAAGCGTGAAGAAGCTGTTGCCGTAGAAAGGGAGCTTACAGCTAGAAAAGAAGATCTGGCAAATGTTAAAATGGCACAGGAGTCTCTTCCATATAAGGAGGGCCAGATGGAAGCATTACAAAAGGATCGTGCATCTGAGTTGGAGCAGGTGCAGAAATTGAAGGATGAAATGCGAAATCTTTCTGGTCAATTAGCAAACGTTGACTTCACATATCGGGATCCTGAGAAGAATTTTGATAGGTCCAAGGTCAAGGGTGTAGTTGCAAGACTTATCAAAGTGAAGGATAGCTCCACGATGACTGCCTTAGAGGTTACTGCTGGTGGAAAGCTTTTTAATGTTGTTGTAGACACAGAGAGTACTGGAAAACAACTTCTTCAGAATGGAAACCTTCGAAGAAGAGTAACAATTATACCTTTGAACAAAATACAGCCTTATACTGTTCATCATAGGGTTCAACATGCTGCTGTTAAATTGGTTGGCAAGGAGAATGCAGAACTAGCACTTTCTTTGGTTGGTTATGATGAGGAGTTAAGAAGTGCTATGGAATTCGTTTTTGGTTCAACCTTTGTTTGCAAAACTATTGATGCTGCAAAGGAGGTTGCTTTTAACAGGGAAATTCGCACCCCAAGTGTCACTCTTGAAGGTGATATCTTTCAGCCTAGTGGCCTTTTAACTGGTGGAAGCCGCAAGGGTGGGGGTGATCTGTTAAGGCAACTTCATGAGCTGGCTGAGACTGAACAAAAACTTTTGGTGCATCAGAGAAGATTGACTGAAATCGAAGCTAAGATTACAGAGTTTCTGCCTCTTCAGAAGAAGTTCATGGACCTTAAAGCACAGTTAGAACTTAAATCGTATGACCTTTCGTTATTTCAGGGCAGGGCTGAGCAAAATGAACATCATAAGCTTGGTGAATTAGTAAGAAGGATTGAGCAGGAGCTTCAAGAAGCGCAATCTGCAGCTAAAGAAAAGCAGCTTCTTTATGAAGATTGTGTGAATAAAGTGTTGGTGCTTGAGAAATCAATCAAAGATAATGATAATAGCCGGGAGGGAAGGCTCAAAGATTTTGAAAAGAGGATTAAAGAAACAAAAGCTCAAATGCAATCAGCTTCAAAGAATCTCAAGGGGCATGAAAATGAAAAAGAGAAGCTTATTTTGGAAAAGGAAGCTATTATAAAGGAACTTGCATCTTTGGAGACTCAGTTAGCTTCTTTGAGAACGCAAATTGACAACCTAACTTCAGAAGTAGAAGAGCAGAGAGAAAAGGTAGCTTCCACCAGAAATATGCATGATCAGGCACAATCTGAGCTTAATTCGATTCGGATGAAGATGAAGGACTGTGATTCCCAAATTAGTGGCATTCTTAAGGAGCAGCAAAGACTTCAACATAAACTTAGCGAGACAAATCTTGAACGGAAGAAAATGGAAAATGAGGTAAAACGAATGGAAATGGAACAGAAAGATTGCTCTACGAAAGTAGACAAATTGATGGAGAAGCATGCCTGGATTGCATCCGAGAAACAACTATTTGGTAAAACTGGGACTGATTATGATTTTAGCTTGCGAGATCCTCGTAATGCAAGGGAAGAACTTGAGAAACTGCAGGCACAACAGTCTGGTCTTGAGAAAAGAGTGAATAAGAAAGTCATGGCAATGTTCGAGAAAGCAGAAGATGAGTACAACGATCTCATGTCTAAGAAGAACATCATTGAGAATGATAAGTCTAAGATCAAGAAGGTGATAGAAGAGCTGGATGAGAAAAAGAAGGAAACACTGAAAGTTACTTGGGTAAAGGTTAACAACGACTTTGGATCTATCTTTTCCACCCTTTTGCCCGGCACAATGGGAAAGCTTGAACCTCCTGAAGGGTGCAGCTTCCTAGATGGACTAGAGGTTCGTGTTGCATTTGGTGGTGTTTGGAAACAGTCCTTGTCAGAACTGAGTGGGGGTCAACGATCGCTGCTTGCACTTTCTCTCATCTTGGCATTGCTTCTCTTCAAACCAGCTCCACTTTATATACTGGATGAGGTTGATGCGGCTCTTGATCTAAGCCACACACAGAATATTGGAAGAATGATCAAAACTCATTTCCCACACTCCCAGTTTATTGTGGTTTCACTGAAAGAAGGCATGTTCAACAATGCTAATGTTCTTTTCCGGACCAAATTTGTGGATGGAGTTTCAACTGTTCAAAGGACTGTTGCAGCTAAGCAGAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000793 GO:0000796 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0044815

KEGG Pathways

Metabolic & Signaling

ko04111 map04111

Pfam Domains

Protein Families

SMC_N SMC_hinge

Protein Analysis

1176

Amino Acids

133.05

Weight (kDa)

7.04

Isoelectric Point (pI)

38.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003832)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47460 AT3G47460 AT5G62410
fragaria_vesca	FvH4_7g25682 FvH4_7g25682 FvH4_7g25682 FvH4_7g25682 FvH4_7g25682 FvH4_7g27331 FvH4_7g27350 FvH4_7g27351 FvH4_7g27370 FvH4_7g27601 FvH4_7g27643 FvH4_7g27644 FvH4_7g27690 FvH4_7g28371 FvH4_7g28372 FvH4_7g28800
malus_domestica	MD01G1182300.v1.1 MD07G1252800.v1.1
prunus_persica	Prupe.2G276400_v2.0.a1
pyrus_communis	pycom01g19230 pycom07g22540
rosa_chinensis	RchiOBHm_Chr1g0374201
rosa_laevigata	RLG00000026756
rosa_multiflora	Rmu_co8310535.1_g000001
rosa_roxburghii	Rroxscaffold_4G00283650
rosa_rugosa	Rorug01G0381300
rosa_samantha	Rh1AG392300 Rh1BG356300 Rh1CG369300 Rh1DG386800
rosa_wichuraiana	Rw1G034340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	434, 2483
AarI	CACCTGC	2 cut(s)	754, 1447
Acc16I	TGCGCA	1 cut(s)	366
Acc36I	ACCTGC	2 cut(s)	754, 1447
AccB1I	GGYRCC	1 cut(s)	58
AccBSI	CCGCTC	1 cut(s)	264
AccI	GTMKAC	4 cut(s)	198, 789, 1656, 2787
AccII	CGCG	1 cut(s)	44
AccIII	TCCGGA	1 cut(s)	3465
AciI	CCGC	8 cut(s)	262, 268, 422, 539, 725, 1076, 1996, 3344
AclI	AACGTT	1 cut(s)	1509
AclWI	GGATC	6 cut(s)	690, 1443, 1523, 1536, 2870, 3127
AcsI	RAATTY	5 cut(s)	777, 1540, 1856, 1926, 3473
AcuI	CTGAAG	4 cut(s)	1670, 2102, 2532, 3192
AfaI	GTAC	8 cut(s)	5, 41, 344, 650, 948, 1139, 1669, 2987
AfiI	CCNNNNNNNGG	2 cut(s)	1338, 3173
AflII	CTTAAG	1 cut(s)	2672
AjnI	CCWGG	4 cut(s)	210, 600, 1140, 2810
AjuI	GAANNNNNNNTTGG	6 cut(s)	1848, 1880, 2297, 2329, 2447, 2479
AloI	GAACNNNNNNTCC	2 cut(s)	3186, 3218
Alw21I	GWGCWC	1 cut(s)	195
Alw26I	GTCTC	8 cut(s)	241, 518, 732, 1034, 1398, 2036, 2498, 2702
AlwI	GGATC	6 cut(s)	690, 1443, 1523, 1536, 2870, 3127
AlwNI	CAGNNNCTG	1 cut(s)	1117
Ama87I	CYCGRG	2 cut(s)	62, 476
Aor13HI	TCCGGA	1 cut(s)	3465
AoxI	GGCC	7 cut(s)	208, 213, 228, 288, 771, 1411, 1975
ApoI	RAATTY	5 cut(s)	777, 1540, 1856, 1926, 3473
ArsI	GACNNNNNNTTYG	4 cut(s)	291, 323, 3186, 3218
Asp700I	GAANNNNTTC	3 cut(s)	717, 1489, 2126
AspLEI	GCGC	3 cut(s)	367, 447, 2260
AspS9I	GGNCC	6 cut(s)	289, 379, 1411, 1551, 2134, 3468
AsuC2I	CCSGG	5 cut(s)	63, 64, 173, 2354, 3144
AsuHPI	GGTGA	8 cut(s)	145, 301, 778, 1214, 1967, 2021, 2231, 3058
AsuII	TTCGAA	1 cut(s)	1702
AvaI	CYCGRG	2 cut(s)	62, 476
AvaII	GGWCC	4 cut(s)	379, 1551, 2134, 3468
BaeGI	GKGCMC	1 cut(s)	63
BamHI	GGATCC	1 cut(s)	1528
BanI	GGYRCC	1 cut(s)	58
BanII	GRGCYC	1 cut(s)	195
BarI	GAAGNNNNNNTAC	2 cut(s)	930, 962
BbsI	GAAGAC	2 cut(s)	554, 1023
Bbv12I	GWGCWC	1 cut(s)	195
BccI	CCATC	6 cut(s)	248, 300, 1411, 2791, 3185, 3476
BceAI	ACGGC	1 cut(s)	1316
BcgI	CGANNNNNNTGC	2 cut(s)	259, 293
BciT130I	CCWGG	4 cut(s)	212, 602, 1142, 2812
BclI	TGATCA	3 cut(s)	348, 2599, 3384
BcnI	CCSGG	5 cut(s)	63, 64, 173, 2354, 3144
BcoDI	GTCTC	8 cut(s)	241, 518, 732, 1034, 1398, 2036, 2498, 2702
BfaI	CTAG	8 cut(s)	372, 870, 1151, 1353, 1808, 1971, 3188, 3197
BfmI	CTRYAG	2 cut(s)	2265, 2909
BfrI	CTTAAG	1 cut(s)	2672
BfuAI	ACCTGC	2 cut(s)	754, 1447
BglI	GCCNNNNNGGC	1 cut(s)	216
BglII	AGATCT	1 cut(s)	1363
BlpI	GCTNAGC	2 cut(s)	2193, 3516
BmcAI	AGTACT	2 cut(s)	344, 1669
Bme1390I	CCNGG	9 cut(s)	63, 64, 173, 212, 602, 1142, 2354, 2812, 3144
Bme18I	GGWCC	4 cut(s)	379, 1551, 2134, 3468
BmeT110I	CYCGRG	2 cut(s)	62, 476
BmgT120I	GGNCC	6 cut(s)	289, 379, 1411, 1551, 2134, 3468
BmiI	GGNNCC	2 cut(s)	60, 1530
BmrFI	CCNGG	9 cut(s)	63, 64, 173, 212, 602, 1142, 2354, 2812, 3144
BmrI	ACTGGG	2 cut(s)	2856, 3403
BmsI	GCATC	9 cut(s)	159, 901, 1195, 1451, 1885, 2074, 2504, 2828, 3331
BmuI	ACTGGG	2 cut(s)	2856, 3403
BpiI	GAAGAC	2 cut(s)	554, 1023
Bpu1102I	GCTNAGC	2 cut(s)	2193, 3516
Bpu14I	TTCGAA	1 cut(s)	1702
BpuEI	CTTGAG	5 cut(s)	575, 2342, 2414, 2921, 2951
BpuMI	CCSGG	5 cut(s)	63, 64, 173, 2354, 3144
BsaI	GGTCTC	1 cut(s)	518
BsaJI	CCNNGG	6 cut(s)	62, 277, 453, 618, 1141, 1554
BsaWI	WCCGGW	1 cut(s)	3465
BsaXI	ACNNNNNCTCC	2 cut(s)	2495, 2525
Bsc4I	CCNNNNNNNGG	2 cut(s)	1338, 3173
Bse118I	RCCGGY	1 cut(s)	215
Bse1I	ACTGG	5 cut(s)	1675, 1990, 2851, 3333, 3409
Bse3DI	GCAATG	4 cut(s)	662, 702, 2967, 3293
BseAI	TCCGGA	1 cut(s)	3465
BseBI	CCWGG	4 cut(s)	212, 602, 1142, 2812
BseDI	CCNNGG	6 cut(s)	62, 277, 453, 618, 1141, 1554
BseGI	GGATG	8 cut(s)	120, 292, 1480, 2637, 2819, 3067, 3337, 3487
BseLI	CCNNNNNNNGG	2 cut(s)	1338, 3173
BseMI	GCAATG	4 cut(s)	662, 702, 2967, 3293
BseMII	CTCAG	9 cut(s)	774, 1124, 1437, 1524, 2031, 2184, 2522, 2604, 3239
BseNI	ACTGG	5 cut(s)	1675, 1990, 2851, 3333, 3409
BseRI	GAGGAG	2 cut(s)	646, 1850
BseSI	GKGCMC	1 cut(s)	63
BseYI	CCCAGC	1 cut(s)	506
BsgI	GTGCAG	4 cut(s)	422, 765, 1481, 3199
Bsh1236I	CGCG	1 cut(s)	44
Bsh1285I	CGRYCG	2 cut(s)	262, 3266
BshFI	GGCC	7 cut(s)	210, 215, 230, 290, 773, 1413, 1977
BshNI	GGYRCC	1 cut(s)	58
BsiEI	CGRYCG	2 cut(s)	262, 3266
BsiHKAI	GWGCWC	1 cut(s)	195
BsiHKCI	CYCGRG	2 cut(s)	62, 476
BsiSI	CCGG	6 cut(s)	63, 172, 216, 2353, 3144, 3466
BsiWI	CGTACG	1 cut(s)	39
BslFI	GGGAC	4 cut(s)	258, 523, 988, 2863
BslI	CCNNNNNNNGG	2 cut(s)	1338, 3173
BsmAI	GTCTC	8 cut(s)	241, 518, 732, 1034, 1398, 2036, 2498, 2702
BsmBI	CGTCTC	2 cut(s)	241, 1034
BsmFI	GGGAC	4 cut(s)	258, 523, 988, 2863
BsmI	GAATGC	2 cut(s)	1804, 2667
BsnI	GGCC	7 cut(s)	210, 215, 230, 290, 773, 1413, 1977
Bso31I	GGTCTC	1 cut(s)	518
BsoBI	CYCGRG	2 cut(s)	62, 476
Bsp119I	TTCGAA	1 cut(s)	1702
Bsp1286I	GDGCHC	2 cut(s)	63, 195
Bsp13I	TCCGGA	1 cut(s)	3465
Bsp1407I	TGTACA	1 cut(s)	3
Bsp1720I	GCTNAGC	2 cut(s)	2193, 3516
BspACI	CCGC	8 cut(s)	262, 268, 422, 539, 725, 1076, 1996, 3344
BspANI	GGCC	7 cut(s)	210, 215, 230, 290, 773, 1413, 1977
BspCNI	CTCAG	9 cut(s)	775, 1123, 1438, 1525, 2032, 2185, 2521, 2605, 3240
BspEI	TCCGGA	1 cut(s)	3465
BspFNI	CGCG	1 cut(s)	44
BspHI	TCATGA	1 cut(s)	2029
BspLI	GGNNCC	2 cut(s)	60, 1530
BspMAI	CTGCAG	2 cut(s)	2269, 2913
BspMI	ACCTGC	2 cut(s)	754, 1447
BspPI	GGATC	6 cut(s)	690, 1443, 1523, 1536, 2870, 3127
BspQI	GCTCTTC	2 cut(s)	2553, 3048
BspT104I	TTCGAA	1 cut(s)	1702
BspT107I	GGYRCC	1 cut(s)	58
BspTI	CTTAAG	1 cut(s)	2672
BspTNI	GGTCTC	1 cut(s)	518
BsrBI	CCGCTC	1 cut(s)	264
BsrDI	GCAATG	4 cut(s)	662, 702, 2967, 3293
BsrFI	RCCGGY	1 cut(s)	215
BsrGI	TGTACA	1 cut(s)	3
BsrI	ACTGG	5 cut(s)	1675, 1990, 2851, 3333, 3409
BssAI	RCCGGY	1 cut(s)	215
BssECI	CCNNGG	6 cut(s)	62, 277, 453, 618, 1141, 1554
BssT1I	CCWWGG	3 cut(s)	453, 618, 1554
Bst2UI	CCWGG	4 cut(s)	212, 602, 1142, 2812
Bst6I	CTCTTC	7 cut(s)	492, 1401, 1702, 2121, 2553, 3048, 3308
BstAFI	CTTAAG	1 cut(s)	2672
BstAUI	TGTACA	1 cut(s)	3
BstBI	TTCGAA	1 cut(s)	1702
BstC8I	GCNNGC	7 cut(s)	217, 615, 2037, 2808, 2870, 2913, 3273
BstENI	CCTNNNNNAGG	1 cut(s)	3171
BstF5I	GGATG	8 cut(s)	120, 292, 1480, 2637, 2819, 3067, 3337, 3487
BstFNI	CGCG	1 cut(s)	44
BstHHI	GCGC	3 cut(s)	367, 447, 2260
BstMAI	GTCTC	8 cut(s)	241, 518, 732, 1034, 1398, 2036, 2498, 2702
BstMCI	CGRYCG	2 cut(s)	262, 3266
BstMWI	GCNNNNNNNGC	5 cut(s)	216, 1214, 1808, 2264, 2816
BstNI	CCWGG	4 cut(s)	212, 602, 1142, 2812
BstNSI	RCATGY	4 cut(s)	655, 1772, 2810, 3442
BstSCI	CCNGG	9 cut(s)	61, 62, 171, 210, 600, 1140, 2352, 2810, 3142
BstSFI	CTRYAG	2 cut(s)	2265, 2909
BstSLI	GKGCMC	1 cut(s)	63
BstUI	CGCG	1 cut(s)	44
BstV2I	GAAGAC	2 cut(s)	554, 1023
BstX2I	RGATCY	4 cut(s)	1363, 1528, 2875, 3119
BstXI	CCANNNNNNTGG	2 cut(s)	2663, 3478
BstYI	RGATCY	4 cut(s)	1363, 1528, 2875, 3119
BsuRI	GGCC	7 cut(s)	210, 215, 230, 290, 773, 1413, 1977
BtsCI	GGATG	8 cut(s)	120, 292, 1480, 2637, 2819, 3067, 3337, 3487
BtsI	GCAGTG	1 cut(s)	753
BtsIMutI	CAGTG	5 cut(s)	748, 753, 1267, 3080, 3425
BveI	ACCTGC	2 cut(s)	754, 1447
Cac8I	GCNNGC	7 cut(s)	217, 615, 2037, 2808, 2870, 2913, 3273
CaiI	CAGNNNCTG	1 cut(s)	1117
CciI	TCATGA	1 cut(s)	2029
CfoI	GCGC	3 cut(s)	367, 447, 2260
Cfr10I	RCCGGY	1 cut(s)	215
Cfr13I	GGNCC	6 cut(s)	289, 379, 1411, 1551, 2134, 3468
Cfr9I	CCCGGG	1 cut(s)	62
Csp6I	GTAC	8 cut(s)	4, 40, 343, 649, 947, 1138, 1668, 2986
CviQI	GTAC	8 cut(s)	4, 40, 343, 649, 947, 1138, 1668, 2986
DraI	TTTAAA	1 cut(s)	462
Eam1104I	CTCTTC	7 cut(s)	492, 1401, 1702, 2121, 2553, 3048, 3308
EarI	CTCTTC	7 cut(s)	492, 1401, 1702, 2121, 2553, 3048, 3308
Ecl136II	GAGCTC	1 cut(s)	193
Eco130I	CCWWGG	3 cut(s)	453, 618, 1554
Eco24I	GRGCYC	1 cut(s)	195
Eco31I	GGTCTC	1 cut(s)	518
Eco32I	GATATC	1 cut(s)	1960
Eco47I	GGWCC	4 cut(s)	379, 1551, 2134, 3468
Eco53kI	GAGCTC	1 cut(s)	193
Eco57I	CTGAAG	4 cut(s)	1670, 2102, 2532, 3192
Eco88I	CYCGRG	2 cut(s)	62, 476
EcoICRI	GAGCTC	1 cut(s)	193
EcoNI	CCTNNNNNAGG	1 cut(s)	3171
EcoRI	GAATTC	1 cut(s)	1856
EcoRII	CCWGG	4 cut(s)	210, 600, 1140, 2810
EcoRV	GATATC	1 cut(s)	1960
EcoT14I	CCWWGG	3 cut(s)	453, 618, 1554
EcoT22I	ATGCAT	1 cut(s)	2598
EcoT38I	GRGCYC	1 cut(s)	195
ErhI	CCWWGG	3 cut(s)	453, 618, 1554
Esp3I	CGTCTC	2 cut(s)	241, 1034
FalI	AAGNNNNNCTT	2 cut(s)	2442, 2474
FaqI	GGGAC	4 cut(s)	258, 523, 988, 2863
FauI	CCCGC	2 cut(s)	275, 429
FauNDI	CATATG	2 cut(s)	134, 709
FbaI	TGATCA	3 cut(s)	348, 2599, 3384
FblI	GTMKAC	4 cut(s)	198, 789, 1656, 2787
FokI	GGATG	8 cut(s)	107, 279, 1487, 2644, 2806, 3074, 3344, 3494
FriOI	GRGCYC	1 cut(s)	195
FspBI	CTAG	8 cut(s)	372, 870, 1151, 1353, 1808, 1971, 3188, 3197
FspI	TGCGCA	1 cut(s)	366
GlaI	GCGC	3 cut(s)	366, 446, 2259
GsaI	CCCAGC	1 cut(s)	510
HaeIII	GGCC	7 cut(s)	210, 215, 230, 290, 773, 1413, 1977
HapII	CCGG	6 cut(s)	63, 172, 216, 2353, 3144, 3466
HhaI	GCGC	3 cut(s)	367, 447, 2260
Hin6I	GCGC	3 cut(s)	365, 445, 2258
HinP1I	GCGC	3 cut(s)	365, 445, 2258
HincII	GTYRAC	6 cut(s)	415, 790, 852, 1513, 3106, 3260
HindII	GTYRAC	6 cut(s)	415, 790, 852, 1513, 3106, 3260
HindIII	AAGCTT	4 cut(s)	1637, 2213, 2456, 3158
HinfI	GANTC	8 cut(s)	128, 481, 1114, 1391, 2425, 2506, 2626, 2651
HpaI	GTTAAC	3 cut(s)	415, 852, 3106
HpaII	CCGG	6 cut(s)	63, 172, 216, 2353, 3144, 3466
HphI	GGTGA	8 cut(s)	145, 301, 778, 1214, 1967, 2021, 2231, 3058
Hpy166II	GTNNAC	9 cut(s)	199, 415, 790, 852, 1513, 1657, 2788, 3106, 3260
Hpy8I	GTNNAC	9 cut(s)	199, 415, 790, 852, 1513, 1657, 2788, 3106, 3260
Hpy99I	CGWCG	2 cut(s)	49, 794
HpyCH4IV	ACGT	1 cut(s)	1509
HpyF10VI	GCNNNNNNNGC	5 cut(s)	216, 1214, 1808, 2264, 2816
HpySE526I	ACGT	1 cut(s)	1509
HspAI	GCGC	3 cut(s)	365, 445, 2258
Kpn2I	TCCGGA	1 cut(s)	3465
KroI	GCCGGC	1 cut(s)	215
KroNI	GCCGGC	1 cut(s)	217
Ksp22I	TGATCA	3 cut(s)	348, 2599, 3384
KspAI	GTTAAC	3 cut(s)	415, 852, 3106
LguI	GCTCTTC	2 cut(s)	2553, 3048
LmnI	GCTCC	8 cut(s)	269, 760, 1342, 1453, 1604, 2245, 2677, 3319
LweI	GCATC	9 cut(s)	159, 901, 1195, 1451, 1885, 2074, 2504, 2828, 3331
MaeI	CTAG	8 cut(s)	372, 870, 1151, 1353, 1808, 1971, 3188, 3197
MaeII	ACGT	1 cut(s)	1509
MaeIII	GTNAC	5 cut(s)	307, 1621, 1711, 1942, 3088
MbiI	CCGCTC	1 cut(s)	264
MfeI	CAATTG	1 cut(s)	1196
MflI	RGATCY	4 cut(s)	1363, 1528, 2875, 3119
MhlI	GDGCHC	2 cut(s)	63, 195
MlyI	GAGTC	4 cut(s)	122, 1123, 1400, 2500
MmeI	TCCRAC	3 cut(s)	141, 282, 1431
Mph1103I	ATGCAT	1 cut(s)	2598
MroI	TCCGGA	1 cut(s)	3465
MroNI	GCCGGC	1 cut(s)	215
MroXI	GAANNNNTTC	3 cut(s)	717, 1489, 2126
MslI	CAYNNNNRTG	2 cut(s)	2442, 2960
MspA1I	CMGCKG	2 cut(s)	857, 1249
MspCI	CTTAAG	1 cut(s)	2672
MspI	CCGG	6 cut(s)	63, 172, 216, 2353, 3144, 3466
MspR9I	CCNGG	9 cut(s)	63, 64, 173, 212, 602, 1142, 2354, 2812, 3144
MunI	CAATTG	1 cut(s)	1196
Mva1269I	GAATGC	2 cut(s)	1804, 2667
MvaI	CCWGG	4 cut(s)	212, 602, 1142, 2812
MvnI	CGCG	1 cut(s)	44
MwoI	GCNNNNNNNGC	5 cut(s)	216, 1214, 1808, 2264, 2816
NaeI	GCCGGC	1 cut(s)	217
NciI	CCSGG	5 cut(s)	63, 64, 173, 2354, 3144
NdeI	CATATG	2 cut(s)	134, 709
NgoMIV	GCCGGC	1 cut(s)	215
NlaIV	GGNNCC	2 cut(s)	60, 1530
NmeAIII	GCCGAG	1 cut(s)	258
NmuCI	GTSAC	2 cut(s)	307, 1942
NsbI	TGCGCA	1 cut(s)	366
NsiI	ATGCAT	1 cut(s)	2598
NspI	RCATGY	4 cut(s)	655, 1772, 2810, 3442
NspV	TTCGAA	1 cut(s)	1702
PaeI	GCATGC	1 cut(s)	2810
PagI	TCATGA	1 cut(s)	2029
PaqCI	CACCTGC	2 cut(s)	754, 1447
PciSI	GCTCTTC	2 cut(s)	2553, 3048
PcsI	WCGNNNNNNNCGW	2 cut(s)	44, 255
PctI	GAATGC	2 cut(s)	1804, 2667
PdiI	GCCGGC	1 cut(s)	217
PdmI	GAANNNNTTC	3 cut(s)	717, 1489, 2126
PfeI	GAWTC	4 cut(s)	481, 2425, 2626, 2651
Pfl23II	CGTACG	1 cut(s)	39
Ple19I	CGATCG	1 cut(s)	3266
PleI	GAGTC	4 cut(s)	122, 1122, 1399, 2500
PpsI	GAGTC	4 cut(s)	122, 1122, 1399, 2500
PsiI	TTATAA	2 cut(s)	434, 2483
Psp124BI	GAGCTC	1 cut(s)	195
Psp1406I	AACGTT	1 cut(s)	1509
Psp6I	CCWGG	4 cut(s)	210, 600, 1140, 2810
PspFI	CCCAGC	1 cut(s)	506
PspGI	CCWGG	4 cut(s)	210, 600, 1140, 2810
PspLI	CGTACG	1 cut(s)	39
PspN4I	GGNNCC	2 cut(s)	60, 1530
PspPI	GGNCC	6 cut(s)	289, 379, 1411, 1551, 2134, 3468
PstI	CTGCAG	2 cut(s)	2269, 2913
PstNI	CAGNNNCTG	1 cut(s)	1117
PsuI	RGATCY	4 cut(s)	1363, 1528, 2875, 3119
PvuI	CGATCG	1 cut(s)	3266
PvuII	CAGCTG	2 cut(s)	857, 1249
RsaI	GTAC	8 cut(s)	5, 41, 344, 650, 948, 1139, 1669, 2987
RsaNI	GTAC	8 cut(s)	4, 40, 343, 649, 947, 1138, 1668, 2986
RseI	CAYNNNNRTG	2 cut(s)	2442, 2960
SacI	GAGCTC	1 cut(s)	195
SalI	GTCGAC	1 cut(s)	788
SapI	GCTCTTC	2 cut(s)	2553, 3048
Sau96I	GGNCC	6 cut(s)	289, 379, 1411, 1551, 2134, 3468
ScaI	AGTACT	2 cut(s)	344, 1669
SchI	GAGTC	4 cut(s)	122, 1123, 1400, 2500
ScrFI	CCNGG	9 cut(s)	63, 64, 173, 212, 602, 1142, 2354, 2812, 3144
SduI	GDGCHC	2 cut(s)	63, 195
SfaNI	GCATC	9 cut(s)	159, 901, 1195, 1451, 1885, 2074, 2504, 2828, 3331
SfcI	CTRYAG	2 cut(s)	2265, 2909
SfuI	TTCGAA	1 cut(s)	1702
SinI	GGWCC	4 cut(s)	379, 1551, 2134, 3468
SmaI	CCCGGG	1 cut(s)	64
SmiMI	CAYNNNNRTG	2 cut(s)	2442, 2960
SmlI	CTYRAG	6 cut(s)	554, 2321, 2429, 2672, 2900, 2930
SmoI	CTYRAG	6 cut(s)	554, 2321, 2429, 2672, 2900, 2930
SphI	GCATGC	1 cut(s)	2810
SsiI	CCGC	8 cut(s)	262, 268, 422, 539, 725, 1076, 1996, 3344
SspI	AATATT	2 cut(s)	1012, 3373
SspMI	CTAG	8 cut(s)	372, 870, 1151, 1353, 1808, 1971, 3188, 3197
SstI	GAGCTC	1 cut(s)	195
StyD4I	CCNGG	9 cut(s)	61, 62, 171, 210, 600, 1140, 2352, 2810, 3142
StyI	CCWWGG	3 cut(s)	453, 618, 1554
TaiI	ACGT	1 cut(s)	1512
TaqI	TCGA	9 cut(s)	69, 126, 249, 576, 789, 1702, 2088, 2624, 2967
TatI	WGTACW	6 cut(s)	3, 342, 648, 946, 1667, 2985
TauI	GCSGC	4 cut(s)	542, 1079, 1998, 3347
TfiI	GAWTC	4 cut(s)	481, 2425, 2626, 2651
TscAI	CASTG	5 cut(s)	748, 753, 1274, 3087, 3432
TseFI	GTSAC	2 cut(s)	307, 1942
Tsp45I	GTSAC	2 cut(s)	307, 1942
TspGWI	ACGGA	2 cut(s)	1058, 2737
TspMI	CCCGGG	1 cut(s)	62
TspRI	CASTG	5 cut(s)	748, 753, 1274, 3087, 3432
Vha464I	CTTAAG	1 cut(s)	2672
VpaK11BI	GGWCC	4 cut(s)	379, 1551, 2134, 3468
XagI	CCTNNNNNAGG	1 cut(s)	3171
XapI	RAATTY	5 cut(s)	777, 1540, 1856, 1926, 3473
XceI	RCATGY	4 cut(s)	655, 1772, 2810, 3442
XmaI	CCCGGG	1 cut(s)	62
XmiI	GTMKAC	4 cut(s)	198, 789, 1656, 2787
XmnI	GAANNNNTTC	3 cut(s)	717, 1489, 2126
XspI	CTAG	8 cut(s)	372, 870, 1151, 1353, 1808, 1971, 3188, 3197
ZrmI	AGTACT	2 cut(s)	344, 1669
Zsp2I	ATGCAT	1 cut(s)	2598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.