Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002714

Physical Location & Seq

Genomic Coordinates Reverse (-)

25373955 .. 25379297

Gene Structure 5343 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G63320.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3186 bp

ATGGGTAAAGCGCGGAAACACTCTAGAGGGAGACCATCAGGCTTTGTTCCTGATTACATGCAAGCTGTTGAGCCTGATGAATTTGTTTACTCAGAGAGGATGAATTCTGAGGCGTCTCCTCCACTGAAAAGGAGACGTTTTGGTTTGAATGGAGATAACAATGGCGTTTCTAAAGAGGTTTTGTCTCTGTCAAAGATGTCGAGGTCTGAGAGAAAGAATTTAGTTCACAAGTTGAAGATGGAGCTTCAACAGGTCAGGGACCTTAGTAAGAAGATTGCATCTTTCAGTTCAGACACTGTTCTGTTGTCGCCATACAATGATCATAGCTGCAGTGATGGGCCTAGGAGGCCGCCACCAGAAAACTTTGCTACATTTGTTGGGTCACAGGGCAAAAAGCGCCCTCCTGTGCGCAGTGATAAGCAGCGGAATAAGAAAGGTCCATCTCGATTAAATGTCCCAACAAGTTATACTGTTGCTTCAGTGATGAAGGAGTGTGAGACGTTACTCAATCGTTTATGGTCACATAAGTCGGGGTGGCCATTTCGTACTCCAGTTGATCCAGTGATGTTGAATATTCCAGACTATTTTAATGTGATTAAACATCCAATGGATCTTGGAACGATACGAAGCAGGCTGTGTAAAGGTGAATACTCTAGTCCTTTGGACTTTGCAGCAGATGTGCGTCTTACATTTTCAAATTCTATAGCTTACAATCCACCAGGAAATCAGTTCCATACTATGGCTCAGGGTATCAGTAAATATTTTGAATCGGGATGGAAAAGTATAGAGAAAAAAATACCTATGTCTAAACCACCAGTTATTCCCCTAACCAGTTCTGCTTCTCTGGAGTCTGAAATCCCTTTCGAAGTAGCACCGATGAGAAAGAAGGAAGCTGCAATGAACGATAACAAGCTGAGGGTGGAACCTGCTAAGTTGGTCATGACAGATGGTGAGAAGAAAAAATTAGGCCAAGATCTGATGGCATTAGAAGAAGATTTCCCTCAAAAGATTGCTGATCTCCTGAGAGAGCAAAGTGGCAGTGATGGTCAATCTGGAGAAGGTGAGATTGAGATAGATATAGAAGCGCTTTCTGATGAAATCTTGTTCATGGTTCGGAAACTCCTGGATGACTATTTAAGGGAGAAAAAGAAATCCATGGAAAAGAGCGAACCTTGTGAGATGGAGATTGTTCATGACTCTGGATTCAGTAATTCCCCTTTGCAGCCTAGTAAAGGTGATCTGCAAATTGACGAGGATGTTGACATAGTTGGTGGGAATGACCCCTCGGTCTCAAGCCATCCTCCTCTTAAGATAGAAAAAGATGCTGCATGTAGAAATAATGAAAGCAGCAGTTCGAGTAGCTCTAGTAGTGAATCAGGCTCTTCATCTAGTGATTCTGATTCTTGTAGTTCCTCTGGGAGTGAAACAGATTCTATTAAAGCTTCAAAACCCACAAGTAGAGAGGAAAAAAAGCAACCAGGAGTTGGTATAGACAAAAAAGAGGATGATAGCAACAGTGAGAAGATAGTTGTAAATGATTCTTTGAATGAATTGGATCAACTTGAGCATACTGTTGGGGAAAAGTCAACCACCATGGATGCAGTAGTTCTCGTTCCAGATGAGGAGACTGCTCCACCTGAGAGGCAAATTTCCCCAGATTCCCCAGATAAGCGTTACCGCGCGGCTTTCTTGAAGAATCGTTTTGCTGATACCATTATGAAAGCTCGAGAGAAGGCTTTTACCAAGGGTGAAAAAGGGGATCCTGAAAAATTGAGGATAGAAAGAGAGGAGTTTGAAAAACGGCTACGGGAAGAAAAAGAACGGTTACAAGCCGAGGCCAAAGCAGCTGAGGAGGCTCGGAGAAAAGCCAAAGCAGAAGCCGCAGAAAAAGCGAGGAGGGAAAGAGAGCAAGAGAGAGAAGCTGCACGTCAAGCTTTACAAAAGATGGAAAAGACAGTGGAGATAAACGAGGGCATACGGTTTATGGAAGACCTCCAGATGCTTAGAGCTACAGGTACAGAAGGTGATCAATTACCGACTTCCATGGAAGTGATGAGTCCCAAGTTTAGTGAGGATATGTTGGGTTTGGGTAGTTTCAAGATGGAAAGCAACAGTAATCCATTAGAACATCTAGGTCTGTATATGAAAATGGATGAGGATGAGGATGAAGAAGAAGACCCGCCACACTTTAGCCAGAGAAAAGTAGAAGACAATCCCTTTGACAGAAGTGAAAAACAGGAACATAGTCCTCACAGAGTAGAAGGAGAGGATCAACTCGTTAGCGGAAATGAAGAGCCGGTGAGCCAAGAGGCACATGATAATGGGGACCAAGAAGATGGAAAACCCATAAACCCAAATGAAATAGAACGACAACTGGAGAATATGCCAGAGCAAGAAAGTGGAGTTGGTGACAAGGAAGAGCAAGAAACTGAAGTTGTCGATATGAGAAAGCAAGAAAATGAAGTTGTTGATATGGGAGTGGAAGAAGTACATCCCCTTGACCGAAGTGAAGGGCGTACACTCAGTCCTCACAGAAAAGAGAGAGAGGACCCACGTGCTAGCGGTAATGAAGAATCGGTAAGCGAAAAGGCACAAGATTATGAGAACCAAAGAGATGAAAAAATCAATCAAAGCGAGAGAGAAGAACAATTGGAGAATGTGCTAGAGCAAGAAAGTAGTAGAGATGATGATACAGGAGAGCAAGAAACTGAAGTTGTCGGAGTAGGAAAAGAACTTTCCCTTGACAAAAGTGAAGGACAAACACTTAGTCCTCACAGAGAAGAGGGAGAGAACCAACTCGATTGTGGAAACGAAGAACTGGTAAGCCAAAAGACACAAGATAATGGGAACCAAGAAGATGAAAAATCCATCAATAAAATTGAAGGAGAAGAACAATTGGCGAATGTGCCAGAGCAAGAAAGTAGAGTTACTGAAAAAGAAGAACAAGAAACTGGAGTTGTCGACTTGGGAGAGCAAAAAAGCGAAGTTGTCGAAAAGGGGGTAGAAGAAAATGAAGCTGTTGACAATGGTGAGGGAGTGCAAGGAACTGAAGTTTCGGACAAGGGAGGAAACGAAACTGTAGTTGATGGCAATGGAAAGGTAGAAACCGAAGTTGTGGACAAGGCAGGGCAAAAAACTGACCTTGTTGACCAGGGAGAGGAAGATATAGATGTAGAAATTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006950 GO:0006970 GO:0007154 GO:0008150 GO:0009266 GO:0009267 GO:0009409 GO:0009507 GO:0009536 GO:0009605 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0009991 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0033993 GO:0042221 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051365 GO:0051716 GO:0060255 GO:0065007 GO:0071496 GO:0080090 GO:0097305 GO:1901700 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BET Bromodomain

Protein Analysis

1061

Amino Acids

118.97

Weight (kDa)

4.72

Isoelectric Point (pI)

59.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	165 - 249	5.5e-20	Bromodomain
BET	PF17035	313 - 376	1.4e-12	Bromodomain extra-terminal - transcription regulation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63320 AT5G63320 AT5G63320
fragaria_vesca	FvH4_2g09340 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g15310 FvH4_7g03961
malus_domestica	MD06G1147900.v1.1 MD14G1162200.v1.1
prunus_persica	Prupe.5G154800_v2.0.a1
pyrus_communis	pycom06g13720 pycom06g13730 pycom14g13510 pycom72g00010
rosa_chinensis	RchiOBHm_Chr7g0190781
rosa_laevigata	RLG00000004496 RLG00000004499
rosa_multiflora	Rmu_co8422347.1_g000001 Rmu_sc0002819.1_g000007
rosa_roxburghii	Rroxscaffold_3G00264320
rosa_rugosa	Rorug06G0506700 Rorug06G0506700 Rorug06G0506700 Rorug06G0506800
rosa_samantha	Rh7AG113500 Rh7BG116000 Rh7CG118600 Rh7DG117500
rosa_wichuraiana	Rw7G009910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1286
Acc16I	TGCGCA	1 cut(s)	410
Acc36I	ACCTGC	1 cut(s)	934
AccB7I	CCANNNNNTGG	2 cut(s)	739, 1484
AccI	GTMKAC	1 cut(s)	2961
AccII	CGCG	3 cut(s)	13, 1680, 1682
AciI	CCGC	9 cut(s)	13, 350, 424, 1678, 1682, 1881, 2180, 2283, 2562
AclWI	GGATC	6 cut(s)	551, 618, 1563, 1754, 1767, 2277
AcoI	YGGCCR	1 cut(s)	536
AcsI	RAATTY	5 cut(s)	80, 103, 217, 697, 1647
AcuI	CTGAAG	4 cut(s)	462, 2451, 2730, 3069
AcvI	CACGTG	1 cut(s)	2555
AcyI	GRCGYC	1 cut(s)	113
AfaI	GTAC	4 cut(s)	547, 2017, 2490, 2518
AfeI	AGCGCT	1 cut(s)	1086
AfiI	CCNNNNNNNGG	4 cut(s)	739, 1232, 1484, 3157
AflII	CTTAAG	1 cut(s)	1307
AjiI	CACGTC	1 cut(s)	1928
AjnI	CCWGG	4 cut(s)	718, 1122, 1477, 3150
AjuI	GAANNNNNNNTTGG	2 cut(s)	2388, 2420
Alw26I	GTCTC	7 cut(s)	25, 120, 127, 189, 491, 1294, 1619
AlwI	GGATC	6 cut(s)	551, 618, 1563, 1754, 1767, 2277
AlwNI	CAGNNNCTG	1 cut(s)	296
Ama87I	CYCGRG	1 cut(s)	1725
Aor51HI	AGCGCT	1 cut(s)	1086
AoxI	GGCC	5 cut(s)	338, 347, 536, 967, 1836
ApeKI	GCWGC	9 cut(s)	327, 421, 671, 893, 1222, 1325, 1347, 1844, 1922
ApoI	RAATTY	5 cut(s)	80, 103, 217, 697, 1647
ArsI	GACNNNNNNTTYG	4 cut(s)	2201, 2233, 2752, 2784
AspA2I	CCTAGG	1 cut(s)	341
AspLEI	GCGC	5 cut(s)	13, 399, 411, 1087, 1682
AspS9I	GGNCC	5 cut(s)	259, 338, 437, 2326, 2548
AsuHPI	GGTGA	9 cut(s)	656, 962, 1073, 1247, 1760, 2036, 2311, 2420, 3041
AsuII	TTCGAA	1 cut(s)	864
AsuNHI	GCTAGC	1 cut(s)	2558
AvaI	CYCGRG	1 cut(s)	1725
AvaII	GGWCC	4 cut(s)	259, 437, 2326, 2548
AvrII	CCTAGG	1 cut(s)	341
BalI	TGGCCA	1 cut(s)	538
BamHI	GGATCC	1 cut(s)	1759
BbrPI	CACGTG	1 cut(s)	2555
BbsI	GAAGAC	3 cut(s)	1995, 2181, 2214
BbvCI	CCTCAGC	2 cut(s)	914, 1848
BbvI	GCAGC	9 cut(s)	314, 433, 683, 880, 1234, 1312, 1359, 1856, 1909
BceAI	ACGGC	1 cut(s)	1817
BciT130I	CCWGG	4 cut(s)	720, 1124, 1479, 3152
BclI	TGATCA	2 cut(s)	319, 2026
BcoDI	GTCTC	7 cut(s)	25, 120, 127, 189, 491, 1294, 1619
BfaI	CTAG	9 cut(s)	24, 342, 654, 1227, 1365, 1389, 2132, 2559, 2663
BfmI	CTRYAG	4 cut(s)	328, 702, 2010, 3078
BfoI	RGCGCY	2 cut(s)	400, 1088
BfrI	CTTAAG	1 cut(s)	1307
BfuAI	ACCTGC	1 cut(s)	934
BglI	GCCNNNNNGGC	1 cut(s)	346
BglII	AGATCT	1 cut(s)	973
BlnI	CCTAGG	1 cut(s)	341
Bme1390I	CCNGG	4 cut(s)	720, 1124, 1479, 3152
Bme18I	GGWCC	4 cut(s)	259, 437, 2326, 2548
BmeT110I	CYCGRG	1 cut(s)	1725
BmgBI	CACGTC	1 cut(s)	1928
BmgT120I	GGNCC	5 cut(s)	259, 338, 437, 2326, 2548
BmiI	GGNNCC	6 cut(s)	260, 924, 1761, 2327, 2550, 2849
BmrFI	CCNGG	4 cut(s)	720, 1124, 1479, 3152
BmsI	GCATC	4 cut(s)	287, 1312, 1588, 1989
BmtI	GCTAGC	1 cut(s)	2562
BpiI	GAAGAC	3 cut(s)	1995, 2181, 2214
BpmI	CTGGAG	6 cut(s)	534, 866, 1074, 1979, 2396, 2973
Bpu10I	CCTNAGC	3 cut(s)	744, 914, 1848
Bpu14I	TTCGAA	1 cut(s)	864
BpuEI	CTTGAG	2 cut(s)	1276, 1583
BsaAI	YACGTR	1 cut(s)	2555
BsaHI	GRCGYC	1 cut(s)	113
BsaI	GGTCTC	2 cut(s)	25, 1294
BsaJI	CCNNGG	8 cut(s)	341, 1155, 1284, 1593, 1743, 1833, 2043, 3151
Bsc4I	CCNNNNNNNGG	4 cut(s)	739, 1232, 1484, 3157
Bse118I	RCCGGY	1 cut(s)	2296
Bse1I	ACTGG	7 cut(s)	551, 560, 815, 831, 2379, 2823, 2956
Bse3DI	GCAATG	2 cut(s)	903, 3097
BseBI	CCWGG	4 cut(s)	720, 1124, 1479, 3152
BseDI	CCNNGG	8 cut(s)	341, 1155, 1284, 1593, 1743, 1833, 2043, 3151
BseLI	CCNNNNNNNGG	4 cut(s)	739, 1232, 1484, 3157
BseMI	GCAATG	2 cut(s)	903, 3097
BseMII	CTCAG	9 cut(s)	99, 105, 198, 758, 905, 1013, 1629, 1839, 2536
BseNI	ACTGG	7 cut(s)	551, 560, 815, 831, 2379, 2823, 2956
BseRI	GAGGAG	6 cut(s)	108, 1293, 1637, 1802, 1865, 1909
BseXI	GCAGC	9 cut(s)	314, 433, 683, 880, 1234, 1312, 1359, 1856, 1909
BsgI	GTGCAG	1 cut(s)	1908
Bsh1236I	CGCG	3 cut(s)	13, 1680, 1682
BshFI	GGCC	5 cut(s)	340, 349, 538, 969, 1838
BsiHKCI	CYCGRG	1 cut(s)	1725
BsiSI	CCGG	1 cut(s)	2297
BslFI	GGGAC	4 cut(s)	272, 440, 2043, 2339
BslI	CCNNNNNNNGG	4 cut(s)	739, 1232, 1484, 3157
BsmAI	GTCTC	7 cut(s)	25, 120, 127, 189, 491, 1294, 1619
BsmBI	CGTCTC	3 cut(s)	120, 127, 491
BsmFI	GGGAC	4 cut(s)	272, 440, 2043, 2339
BsnI	GGCC	5 cut(s)	340, 349, 538, 969, 1838
Bso31I	GGTCTC	2 cut(s)	25, 1294
BsoBI	CYCGRG	1 cut(s)	1725
Bsp119I	TTCGAA	1 cut(s)	864
Bsp19I	CCATGG	3 cut(s)	1155, 1593, 2043
BspACI	CCGC	9 cut(s)	13, 350, 424, 1678, 1682, 1881, 2180, 2283, 2562
BspANI	GGCC	5 cut(s)	340, 349, 538, 969, 1838
BspCNI	CTCAG	9 cut(s)	100, 104, 199, 757, 906, 1014, 1630, 1840, 2535
BspFNI	CGCG	3 cut(s)	13, 1680, 1682
BspHI	TCATGA	2 cut(s)	939, 1192
BspLI	GGNNCC	6 cut(s)	260, 924, 1761, 2327, 2550, 2849
BspMAI	CTGCAG	1 cut(s)	332
BspMI	ACCTGC	1 cut(s)	934
BspOI	GCTAGC	1 cut(s)	2562
BspPI	GGATC	6 cut(s)	551, 618, 1563, 1754, 1767, 2277
BspQI	GCTCTTC	3 cut(s)	1387, 2286, 2412
BspT104I	TTCGAA	1 cut(s)	864
BspTI	CTTAAG	1 cut(s)	1307
BspTNI	GGTCTC	2 cut(s)	25, 1294
BsrDI	GCAATG	2 cut(s)	903, 3097
BsrFI	RCCGGY	1 cut(s)	2296
BsrI	ACTGG	7 cut(s)	551, 560, 815, 831, 2379, 2823, 2956
BssAI	RCCGGY	1 cut(s)	2296
BssECI	CCNNGG	8 cut(s)	341, 1155, 1284, 1593, 1743, 1833, 2043, 3151
BssNI	GRCGYC	1 cut(s)	113
BssT1I	CCWWGG	5 cut(s)	341, 1155, 1593, 1743, 2043
Bst2UI	CCWGG	4 cut(s)	720, 1124, 1479, 3152
Bst4CI	ACNGT	9 cut(s)	298, 472, 1517, 1573, 1824, 1957, 1980, 2114, 3079
Bst6I	CTCTTC	4 cut(s)	1387, 2286, 2412, 2775
BstACI	GRCGYC	1 cut(s)	113
BstAFI	CTTAAG	1 cut(s)	1307
BstBAI	YACGTR	1 cut(s)	2555
BstBI	TTCGAA	1 cut(s)	864
BstC8I	GCNNGC	3 cut(s)	63, 632, 2560
BstDSI	CCRYGG	3 cut(s)	1155, 1593, 2043
BstENI	CCTNNNNNAGG	1 cut(s)	1230
BstFNI	CGCG	3 cut(s)	13, 1680, 1682
BstH2I	RGCGCY	2 cut(s)	400, 1088
BstHHI	GCGC	5 cut(s)	13, 399, 411, 1087, 1682
BstMAI	GTCTC	7 cut(s)	25, 120, 127, 189, 491, 1294, 1619
BstMWI	GCNNNNNNNGC	7 cut(s)	346, 396, 1844, 1853, 1880, 1889, 1931
BstNI	CCWGG	4 cut(s)	720, 1124, 1479, 3152
BstNSI	RCATGY	2 cut(s)	61, 1332
BstSCI	CCNGG	4 cut(s)	718, 1122, 1477, 3150
BstSFI	CTRYAG	4 cut(s)	328, 702, 2010, 3078
BstUI	CGCG	3 cut(s)	13, 1680, 1682
BstV1I	GCAGC	9 cut(s)	314, 433, 683, 880, 1234, 1312, 1359, 1856, 1909
BstV2I	GAAGAC	3 cut(s)	1995, 2181, 2214
BstX2I	RGATCY	3 cut(s)	610, 973, 1759
BstXI	CCANNNNNNTGG	1 cut(s)	2336
BstYI	RGATCY	3 cut(s)	610, 973, 1759
BsuRI	GGCC	5 cut(s)	340, 349, 538, 969, 1838
BtgI	CCRYGG	3 cut(s)	1155, 1593, 2043
BtrI	CACGTC	1 cut(s)	1928
BtsI	GCAGTG	3 cut(s)	337, 418, 1045
BtsIMutI	CAGTG	9 cut(s)	122, 294, 337, 418, 486, 567, 1045, 1522, 1962
BveI	ACCTGC	1 cut(s)	934
Cac8I	GCNNGC	3 cut(s)	63, 632, 2560
CaiI	CAGNNNCTG	1 cut(s)	296
CciI	TCATGA	2 cut(s)	939, 1192
CfoI	GCGC	5 cut(s)	13, 399, 411, 1087, 1682
Cfr10I	RCCGGY	1 cut(s)	2296
Cfr13I	GGNCC	5 cut(s)	259, 338, 437, 2326, 2548
CseI	GACGC	2 cut(s)	102, 671
Csp6I	GTAC	4 cut(s)	546, 2016, 2489, 2517
CviAII	CATG	9 cut(s)	58, 940, 1108, 1156, 1193, 1329, 1594, 2044, 2315
CviQI	GTAC	4 cut(s)	546, 2016, 2489, 2517
DrdI	GACNNNNNNGTC	1 cut(s)	1286
DseDI	GACNNNNNNGTC	1 cut(s)	1286
EaeI	YGGCCR	1 cut(s)	536
Eam1104I	CTCTTC	4 cut(s)	1387, 2286, 2412, 2775
EarI	CTCTTC	4 cut(s)	1387, 2286, 2412, 2775
Eco130I	CCWWGG	5 cut(s)	341, 1155, 1593, 1743, 2043
Eco31I	GGTCTC	2 cut(s)	25, 1294
Eco47I	GGWCC	4 cut(s)	259, 437, 2326, 2548
Eco47III	AGCGCT	1 cut(s)	1086
Eco57I	CTGAAG	4 cut(s)	462, 2451, 2730, 3069
Eco72I	CACGTG	1 cut(s)	2555
Eco88I	CYCGRG	1 cut(s)	1725
EcoNI	CCTNNNNNAGG	1 cut(s)	1230
EcoO109I	RGGNCCY	2 cut(s)	259, 2548
EcoRI	GAATTC	1 cut(s)	103
EcoRII	CCWGG	4 cut(s)	718, 1122, 1477, 3150
EcoT14I	CCWWGG	5 cut(s)	341, 1155, 1593, 1743, 2043
ErhI	CCWWGG	5 cut(s)	341, 1155, 1593, 1743, 2043
Esp3I	CGTCTC	3 cut(s)	120, 127, 491
FaeI	CATG	9 cut(s)	61, 943, 1111, 1159, 1196, 1332, 1597, 2047, 2318
FaqI	GGGAC	4 cut(s)	272, 440, 2043, 2339
FatI	CATG	9 cut(s)	57, 939, 1107, 1155, 1192, 1328, 1593, 2043, 2314
FauI	CCCGC	1 cut(s)	2187
FbaI	TGATCA	2 cut(s)	319, 2026
FblI	GTMKAC	1 cut(s)	2961
FspBI	CTAG	9 cut(s)	24, 342, 654, 1227, 1365, 1389, 2132, 2559, 2663
FspI	TGCGCA	1 cut(s)	410
GlaI	GCGC	5 cut(s)	12, 398, 410, 1086, 1681
GsuI	CTGGAG	6 cut(s)	534, 866, 1074, 1979, 2396, 2973
HaeII	RGCGCY	2 cut(s)	400, 1088
HaeIII	GGCC	5 cut(s)	340, 349, 538, 969, 1838
HapII	CCGG	1 cut(s)	2297
HgaI	GACGC	2 cut(s)	102, 671
HhaI	GCGC	5 cut(s)	13, 399, 411, 1087, 1682
Hin1I	GRCGYC	1 cut(s)	113
Hin1II	CATG	9 cut(s)	61, 943, 1111, 1159, 1196, 1332, 1597, 2047, 2318
Hin6I	GCGC	5 cut(s)	11, 397, 409, 1085, 1680
HinP1I	GCGC	5 cut(s)	11, 397, 409, 1085, 1680
HincII	GTYRAC	5 cut(s)	1261, 1587, 2962, 3022, 3148
HindII	GTYRAC	5 cut(s)	1261, 1587, 2962, 3022, 3148
HindIII	AAGCTT	2 cut(s)	1440, 1932
HpaII	CCGG	1 cut(s)	2297
HphI	GGTGA	9 cut(s)	656, 962, 1073, 1247, 1760, 2036, 2311, 2420, 3041
Hpy166II	GTNNAC	9 cut(s)	88, 226, 1261, 1587, 2519, 2962, 3022, 3118, 3148
Hpy8I	GTNNAC	9 cut(s)	88, 226, 1261, 1587, 2519, 2962, 3022, 3118, 3148
HpyAV	CCTTC	9 cut(s)	481, 880, 1052, 1726, 2015, 2255, 2504, 2747, 2876
HpyCH4III	ACNGT	9 cut(s)	298, 472, 1517, 1573, 1824, 1957, 1980, 2114, 3079
HpyCH4IV	ACGT	4 cut(s)	136, 500, 1927, 2554
HpyF10VI	GCNNNNNNNGC	7 cut(s)	346, 396, 1844, 1853, 1880, 1889, 1931
HpySE526I	ACGT	4 cut(s)	136, 500, 1927, 2554
Hsp92I	GRCGYC	1 cut(s)	113
Hsp92II	CATG	9 cut(s)	61, 943, 1111, 1159, 1196, 1332, 1597, 2047, 2318
HspAI	GCGC	5 cut(s)	11, 397, 409, 1085, 1680
Ksp22I	TGATCA	2 cut(s)	319, 2026
LguI	GCTCTTC	3 cut(s)	1387, 2286, 2412
LmnI	GCTCC	2 cut(s)	241, 1636
Lsp1109I	GCAGC	9 cut(s)	314, 433, 683, 880, 1234, 1312, 1359, 1856, 1909
LweI	GCATC	4 cut(s)	287, 1312, 1588, 1989
MaeI	CTAG	9 cut(s)	24, 342, 654, 1227, 1365, 1389, 2132, 2559, 2663
MaeII	ACGT	4 cut(s)	136, 500, 1927, 2554
MaeIII	GTNAC	7 cut(s)	381, 501, 519, 1673, 1824, 2408, 2926
MfeI	CAATTG	2 cut(s)	2648, 2894
MflI	RGATCY	3 cut(s)	610, 973, 1759
MlsI	TGGCCA	1 cut(s)	538
MluNI	TGGCCA	1 cut(s)	538
MlyI	GAGTC	3 cut(s)	857, 1190, 2065
MmeI	TCCRAC	1 cut(s)	2698
Mox20I	TGGCCA	1 cut(s)	538
MscI	TGGCCA	1 cut(s)	538
MseI	TTAA	6 cut(s)	449, 588, 597, 1136, 1308, 1437
MslI	CAYNNNNRTG	2 cut(s)	2048, 2319
Msp20I	TGGCCA	1 cut(s)	538
MspA1I	CMGCKG	2 cut(s)	424, 1847
MspCI	CTTAAG	1 cut(s)	1307
MspI	CCGG	1 cut(s)	2297
MspR9I	CCNGG	4 cut(s)	720, 1124, 1479, 3152
MunI	CAATTG	2 cut(s)	2648, 2894
MvaI	CCWGG	4 cut(s)	720, 1124, 1479, 3152
MvnI	CGCG	3 cut(s)	13, 1680, 1682
MwoI	GCNNNNNNNGC	7 cut(s)	346, 396, 1844, 1853, 1880, 1889, 1931
NcoI	CCATGG	3 cut(s)	1155, 1593, 2043
NheI	GCTAGC	1 cut(s)	2558
NlaIII	CATG	9 cut(s)	61, 943, 1111, 1159, 1196, 1332, 1597, 2047, 2318
NlaIV	GGNNCC	6 cut(s)	260, 924, 1761, 2327, 2550, 2849
NmeAIII	GCCGAG	1 cut(s)	1858
NmuCI	GTSAC	3 cut(s)	381, 519, 2408
NsbI	TGCGCA	1 cut(s)	410
NspI	RCATGY	2 cut(s)	61, 1332
NspV	TTCGAA	1 cut(s)	864
PaeR7I	CTCGAG	1 cut(s)	1725
PagI	TCATGA	2 cut(s)	939, 1192
PciSI	GCTCTTC	3 cut(s)	1387, 2286, 2412
PflMI	CCANNNNNTGG	2 cut(s)	739, 1484
PfoI	TCCNGGA	1 cut(s)	1122
PleI	GAGTC	3 cut(s)	856, 1190, 2064
PmaCI	CACGTG	1 cut(s)	2555
PmlI	CACGTG	1 cut(s)	2555
PpsI	GAGTC	3 cut(s)	856, 1190, 2064
Ppu21I	YACGTR	1 cut(s)	2555
PpuMI	RGGWCCY	2 cut(s)	259, 2548
Psp5II	RGGWCCY	2 cut(s)	259, 2548
Psp6I	CCWGG	4 cut(s)	718, 1122, 1477, 3150
PspCI	CACGTG	1 cut(s)	2555
PspGI	CCWGG	4 cut(s)	718, 1122, 1477, 3150
PspN4I	GGNNCC	6 cut(s)	260, 924, 1761, 2327, 2550, 2849
PspPI	GGNCC	5 cut(s)	259, 338, 437, 2326, 2548
PspPPI	RGGWCCY	2 cut(s)	259, 2548
PsrI	GAACNNNNNNTAC	2 cut(s)	1596, 1628
PstI	CTGCAG	1 cut(s)	332
PstNI	CAGNNNCTG	1 cut(s)	296
PsuI	RGATCY	3 cut(s)	610, 973, 1759
PvuII	CAGCTG	1 cut(s)	1847
RsaI	GTAC	4 cut(s)	547, 2017, 2490, 2518
RsaNI	GTAC	4 cut(s)	546, 2016, 2489, 2517
RseI	CAYNNNNRTG	2 cut(s)	2048, 2319
SalI	GTCGAC	1 cut(s)	2960
SapI	GCTCTTC	3 cut(s)	1387, 2286, 2412
SaqAI	TTAA	6 cut(s)	449, 588, 597, 1136, 1308, 1437
Sau96I	GGNCC	5 cut(s)	259, 338, 437, 2326, 2548
SchI	GAGTC	3 cut(s)	857, 1190, 2065
ScrFI	CCNGG	4 cut(s)	720, 1124, 1479, 3152
SfaNI	GCATC	4 cut(s)	287, 1312, 1588, 1989
SfcI	CTRYAG	4 cut(s)	328, 702, 2010, 3078
SfiI	GGCCNNNNNGGCC	1 cut(s)	346
Sfr274I	CTCGAG	1 cut(s)	1725
SfuI	TTCGAA	1 cut(s)	864
SinI	GGWCC	4 cut(s)	259, 437, 2326, 2548
SlaI	CTCGAG	1 cut(s)	1725
SmiMI	CAYNNNNRTG	2 cut(s)	2048, 2319
SmlI	CTYRAG	4 cut(s)	1291, 1307, 1562, 1725
SmoI	CTYRAG	4 cut(s)	1291, 1307, 1562, 1725
SsiI	CCGC	9 cut(s)	13, 350, 424, 1678, 1682, 1881, 2180, 2283, 2562
SspI	AATATT	2 cut(s)	574, 761
SspMI	CTAG	9 cut(s)	24, 342, 654, 1227, 1365, 1389, 2132, 2559, 2663
StyD4I	CCNGG	4 cut(s)	718, 1122, 1477, 3150
StyI	CCWWGG	5 cut(s)	341, 1155, 1593, 1743, 2043
TaaI	ACNGT	9 cut(s)	298, 472, 1517, 1573, 1824, 1957, 1980, 2114, 3079
TaiI	ACGT	4 cut(s)	139, 503, 1930, 2557
TaqI	TCGA	9 cut(s)	200, 445, 864, 1355, 1726, 2439, 2799, 2961, 2991
TaqII	GACCGA	2 cut(s)	1276, 2517
TatI	WGTACW	1 cut(s)	2488
TauI	GCSGC	3 cut(s)	352, 1685, 1883
Tru1I	TTAA	6 cut(s)	449, 588, 597, 1136, 1308, 1437
Tru9I	TTAA	6 cut(s)	449, 588, 597, 1136, 1308, 1437
TscAI	CASTG	9 cut(s)	129, 301, 337, 418, 486, 567, 1045, 1522, 1962
TseFI	GTSAC	3 cut(s)	381, 519, 2408
TseI	GCWGC	9 cut(s)	327, 421, 671, 893, 1222, 1325, 1347, 1844, 1922
Tsp45I	GTSAC	3 cut(s)	381, 519, 2408
TspRI	CASTG	9 cut(s)	129, 301, 337, 418, 486, 567, 1045, 1522, 1962
Van91I	CCANNNNNTGG	2 cut(s)	739, 1484
Vha464I	CTTAAG	1 cut(s)	1307
VpaK11BI	GGWCC	4 cut(s)	259, 437, 2326, 2548
XagI	CCTNNNNNAGG	1 cut(s)	1230
XapI	RAATTY	5 cut(s)	80, 103, 217, 697, 1647
XbaI	TCTAGA	1 cut(s)	23
XceI	RCATGY	2 cut(s)	61, 1332
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2801
XhoI	CTCGAG	1 cut(s)	1725
XmaJI	CCTAGG	1 cut(s)	341
XmiI	GTMKAC	1 cut(s)	2961
XspI	CTAG	9 cut(s)	24, 342, 654, 1227, 1365, 1389, 2132, 2559, 2663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.