Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0003545

Physical Location & Seq

Genomic Coordinates Forward (+)

370955 .. 375860

Gene Structure 4906 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g00720.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGGCGGCGGCGGCTCTGGTTTCTCCATTAGGGTATACACATCCGAATCGATTGTCTTTATTTGGATCTATAAAGTTTCAGCCATCTGCGTATTCGATATGCAATCTGGCTGGAGACTCGCGATTTGAGGGTCGTGAACGTGTGAGGTACACTAGAGAGCAGCTCTTTCAGCTTAGAGAGGCTGTTGAGGTTCCTGATGAAATTATTAAAGTCAGACAAGAAGTTGAAGCCGAGTTTCTTGTTGAAAATCAACCCTGGGTCCATGAACCCAGATTGCCAAATCAACCAGCTCATTATCCTGAGCCAGACAACCGGGATTGGCGCAACCGTCGTCCTGAGACACCTCGGGAGAATAGGGAGCCTGGTAATTACAAACAGCAGGAACCAAATCAACAACAATATTCTAGGCCACAAAACCCTTCCAACCAAGTGGGAGGGATAGTAAAAGCCGAGGTCCCATGGTCAGCTAGAAGGGGTACCCTATCTGACAAGGACCGTGTGCTGAAGACTGTGAAGGGGATACTGAACAAGCTGACACCGGAGAAGTTTGATCTCCTTAAAGGACAGCTAGTGAAATCTGGGATTACCTCGGCTGATATCCTAAAGGACGTCATTGAATTGATCTTTGATAAGGCTGTGCTGGAACCTACATTTTGCCCAATGTATGCTCTTCTATGCTCCGATCTTAATGAAAGGCTTCCCCGGTTCCCGTCAGAGGAACCAGATGGAAAAGAAATCACTTTCAAGCGTGTCCTCTTGAACAATTGCCAAGAGGCTTTTGATGGTGCTGACAAACTGAGGGAAGAAGTGCGGCAGATGACCGCCCCTGAGCAAGAGATGGAACGTAAGGATAAAGAAAGATTGGCTAAGATTCGTACTCTGGGAAACATTCGTTTAATTGGAGAGCTCCTGAAGCAGAAGATGGTACCTGAGAAGATTGTCCATCACATTGTTATGGAGCTCTTAGGACCTGACCCCAACATTTGTCCTGCTGAGGAAAACGTGGAGGCCATATGCCATTTTTTTACCACTATTGGTAAACAGCTTGATGAGAATCAAAAAGCACGTCATGTAAACAAGGGGTACTTTGACCGATTGAAGGAACTGGCAGCAAACCCTCAGTTGGCTCCAAGGCTGAGGTTTATGGTTCGTGATGTAATTGATTTGCGCTCCAACAACTGGGTTCCCAGGCGTGAGGAGGTGAAAGCTAAAACCATCAGTGAAATACATACAGAGGCAGAAAAGAATCTTGGATTACGTCCTGGTAGCATTAGAACTGGTCGTGGCAACTTTTCTGGTACTCAAGGGAGTGCCAGCCCTGGTCCCTTCCCCAACAACCGACCTGGTTTAGGGGGTATGATGCCCGGTATGCCTGGGATTCCAGGAACCAGGAAGATGCCTGGTATGCCTGGAATGGACAATGACAATTGGGAGGTGCCTAAGAATCGGTCAATGCCAAGAGGTGATGGTTCTGGTATGCAGCCAGCTGTGCGTGGGGGCCAGATGCCATTTAGTGGCAAGCCAACGTCTGTGAACACAAGGCTGTTACCTCAGGGTAGTGCTGGCCTCACTAGTGGCCGGCCTAGTGCCTTGTTGCAGGGTACTGGTGCCCCTCCTGCTCGGCCGACCAACTACCCTTTTGGCACCGAGTCTGTAGCTCATGTTGCTGTGCCTGCTAGACCTGTTCCTACTGCTTCGGTACCTGTTGAAAAGCCACAAGCTCCAGCTGCAAAGTCGAAACTGGATGAACTTAGGAAAAAGACAGTTTCCCTTTTGGAGGAATATTTCAGTGTGCGAATTTTAGATGAAGCATTACTGTGTGTGGAGGAGCTAAATTCTCCAGCTTACCACCCTGAGGTTGTCAAAGAAGCCATCTCTCTTGCGCTGGAGAAAAGTACATCCTGTGTTGAACCACTTGTGAAGCTTCTCGAGCATTTGTTTTCTAAGAAGGTCTTTACAGCGAGTGACATAAGGAGCGGATGTTTGCTATATGCGTCTTTGCTGAGTGATATTTGCATTGACCTGCCTAAAGCACCGAGTTATTTTGGTGAAGTTCTGGCAAAATTAATTTTAGTTGGAGCTTTGGATTTTAAGGCGGTAAAAGAGATTTTGAAGGAGGTGGATGACGATTACTATCAGAAAGCTATATTCAATGCAGGACTGCAGATTATTGATTCTAGCCCTTCGGGGCAAGCCGTGCTGGATTCACAAGCATCTGATATTGAGGCCTGTCGGAGTCTATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03013 ko05416 map03013 map05416

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

749

Amino Acids

83.23

Weight (kDa)

8.13

Isoelectric Point (pI)

50.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIF4G	PF02854	168 - 393	9.2e-52	MIF4G domain
MA3	PF02847	584 - 696	9.2e-27	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003545)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57870 AT5G57870
fragaria_vesca	FvH4_1g00720 FvH4_1g00720 FvH4_2g41200
malus_domestica	MD02G1005900.v1.1 MD02G1006000.v1.1 MD08G1055400.v1.1 MD15G1150600.v1.1
prunus_persica	Prupe.1G395100_v2.0.a1 Prupe.7G265100_v2.0.a1
pyrus_communis	pycom02g00490 pycom08g04550 pycom14g07580 pycom15g13480
rosa_chinensis	RchiOBHm_Chr2g0085441 RchiOBHm_Chr6g0299311
rosa_laevigata	RLG00000011443 RLG00000015688
rosa_multiflora	Rmu_sc0007908.1_g000012 Rmu_ssc0000374.1_g000005
rosa_roxburghii	Rroxscaffold_2G00155380 Rroxscaffold_7G00168790
rosa_rugosa	Rorug01G0460400 Rorug06G0287100
rosa_samantha	Rh2AG008600 Rh2BG009900 Rh2CG010400 Rh2DG010800 Rh6AG398600 Rh6BG407000 Rh6CG413000 Rh6DG399800
rosa_wichuraiana	Rw2G000830 Rw6G034890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	612
Acc36I	ACCTGC	1 cut(s)	2031
Acc65I	GGTACC	3 cut(s)	476, 925, 1699
AccB1I	GGYRCC	6 cut(s)	476, 925, 1435, 1607, 1643, 1699
AccB7I	CCANNNNNTGG	2 cut(s)	1179, 1514
AccBSI	CCGCTC	1 cut(s)	1977
AccI	GTMKAC	1 cut(s)	35
AccII	CGCG	1 cut(s)	121
AciI	CCGC	7 cut(s)	5, 8, 11, 811, 822, 1977, 2096
AclWI	GGATC	1 cut(s)	73
AcoI	YGGCCR	2 cut(s)	1576, 1622
AcsI	RAATTY	2 cut(s)	1797, 1834
AcuI	CTGAAG	2 cut(s)	524, 932
AcyI	GRCGYC	1 cut(s)	609
AfaI	GTAC	9 cut(s)	149, 478, 877, 927, 1085, 1300, 1603, 1701, 1897
AfiI	CCNNNNNNNGG	8 cut(s)	715, 1099, 1123, 1179, 1349, 1514, 1777, 1855
AflIII	ACRYGT	1 cut(s)	139
AhlI	ACTAGT	1 cut(s)	1571
AjiI	CACGTC	1 cut(s)	1067
AjuI	GAANNNNNNNTTGG	2 cut(s)	1233, 1265
Alw21I	GWGCWC	2 cut(s)	909, 963
Alw26I	GTCTC	2 cut(s)	108, 332
AlwI	GGATC	1 cut(s)	73
Ama87I	CYCGRG	2 cut(s)	345, 1928
AoxI	GGCC	8 cut(s)	407, 1008, 1498, 1564, 1576, 1580, 1622, 2226
ApeKI	GCWGC	4 cut(s)	160, 1109, 1480, 1727
ApoI	RAATTY	2 cut(s)	1797, 1834
ArsI	GACNNNNNNTTYG	6 cut(s)	38, 70, 107, 139, 1051, 1083
AseI	ATTAAT	1 cut(s)	2066
Asp700I	GAANNNNTTC	1 cut(s)	696
Asp718I	GGTACC	3 cut(s)	476, 925, 1699
AspLEI	GCGC	3 cut(s)	324, 1170, 1885
AspS9I	GGNCC	6 cut(s)	259, 454, 493, 968, 1322, 1498
AsuC2I	CCSGG	3 cut(s)	314, 703, 1365
AsuHPI	GGTGA	3 cut(s)	1213, 1475, 2060
AvaI	CYCGRG	2 cut(s)	345, 1928
AvaII	GGWCC	5 cut(s)	259, 454, 493, 968, 1322
AxyI	CCTNAGG	2 cut(s)	1551, 1854
BaeGI	GKGCMC	1 cut(s)	1612
BanI	GGYRCC	6 cut(s)	476, 925, 1435, 1607, 1643, 1699
BanII	GRGCYC	2 cut(s)	909, 963
BbsI	GAAGAC	1 cut(s)	512
Bbv12I	GWGCWC	2 cut(s)	909, 963
BbvCI	CCTCAGC	2 cut(s)	993, 1136
BbvI	GCAGC	4 cut(s)	172, 1121, 1492, 1714
BccI	CCATC	9 cut(s)	91, 719, 776, 832, 916, 951, 1223, 1460, 1880
BceAI	ACGGC	1 cut(s)	2180
BciVI	GTATCC	1 cut(s)	513
BcnI	CCSGG	3 cut(s)	314, 703, 1365
BcoDI	GTCTC	2 cut(s)	108, 332
BcuI	ACTAGT	1 cut(s)	1571
BfaI	CTAG	9 cut(s)	153, 405, 468, 569, 1572, 1584, 1677, 2178, 2245
BfmI	CTRYAG	2 cut(s)	1653, 2162
BfuAI	ACCTGC	1 cut(s)	2031
BfuI	GTATCC	1 cut(s)	513
BisI	GCNGC	8 cut(s)	6, 9, 12, 161, 812, 1110, 1481, 1728
BlsI	GCNGC	8 cut(s)	7, 10, 13, 162, 813, 1111, 1482, 1729
Bme18I	GGWCC	5 cut(s)	259, 454, 493, 968, 1322
BmeT110I	CYCGRG	2 cut(s)	345, 1928
BmgBI	CACGTC	1 cut(s)	1067
BmgT120I	GGNCC	6 cut(s)	259, 454, 493, 968, 1322, 1498
BmrI	ACTGGG	1 cut(s)	1189
BmsI	GCATC	4 cut(s)	1350, 1386, 1494, 2222
BmuI	ACTGGG	1 cut(s)	1189
BpiI	GAAGAC	1 cut(s)	512
BplI	GAGNNNNNCTC	2 cut(s)	147, 179
BpmI	CTGGAG	4 cut(s)	132, 1707, 1824, 1907
Bpu10I	CCTNAGC	4 cut(s)	300, 828, 993, 1136
BpuEI	CTTGAG	1 cut(s)	1287
BpuMI	CCSGG	3 cut(s)	314, 703, 1365
Bsa29I	ATCGAT	1 cut(s)	49
BsaBI	GATNNNNATC	2 cut(s)	1053, 2133
BsaHI	GRCGYC	1 cut(s)	609
BsaWI	WCCGGW	1 cut(s)	538
BsaXI	ACNNNNNCTCC	4 cut(s)	426, 456, 1966, 1996
Bsc4I	CCNNNNNNNGG	8 cut(s)	715, 1099, 1123, 1179, 1349, 1514, 1777, 1855
Bse118I	RCCGGY	1 cut(s)	1578
Bse1I	ACTGG	5 cut(s)	1110, 1184, 1282, 1609, 1746
Bse21I	CCTNAGG	2 cut(s)	1551, 1854
Bse8I	GATNNNNATC	2 cut(s)	1053, 2133
BseCI	ATCGAT	1 cut(s)	49
BseGI	GGATG	5 cut(s)	40, 1750, 1898, 1985, 2128
BseJI	GATNNNNATC	2 cut(s)	1053, 2133
BseLI	CCNNNNNNNGG	8 cut(s)	715, 1099, 1123, 1179, 1349, 1514, 1777, 1855
BseNI	ACTGG	5 cut(s)	1110, 1184, 1282, 1609, 1746
BseRI	GAGGAG	2 cut(s)	1211, 1841
BseSI	GKGCMC	1 cut(s)	1612
BseX3I	CGGCCG	1 cut(s)	1622
BseXI	GCAGC	4 cut(s)	172, 1121, 1492, 1714
Bsh1236I	CGCG	1 cut(s)	121
Bsh1285I	CGRYCG	1 cut(s)	1625
BshFI	GGCC	8 cut(s)	409, 1010, 1500, 1566, 1578, 1582, 1624, 2228
BshNI	GGYRCC	6 cut(s)	476, 925, 1435, 1607, 1643, 1699
BshVI	ATCGAT	1 cut(s)	49
BsiEI	CGRYCG	1 cut(s)	1625
BsiHKAI	GWGCWC	2 cut(s)	909, 963
BsiHKCI	CYCGRG	2 cut(s)	345, 1928
BsiSI	CCGG	5 cut(s)	313, 539, 703, 1365, 1579
BslFI	GGGAC	2 cut(s)	440, 1308
BslI	CCNNNNNNNGG	8 cut(s)	715, 1099, 1123, 1179, 1349, 1514, 1777, 1855
BsmAI	GTCTC	2 cut(s)	108, 332
BsmFI	GGGAC	2 cut(s)	440, 1308
BsnI	GGCC	8 cut(s)	409, 1010, 1500, 1566, 1578, 1582, 1624, 2228
BsoBI	CYCGRG	2 cut(s)	345, 1928
Bsp1286I	GDGCHC	3 cut(s)	909, 963, 1612
Bsp143I	GATC	4 cut(s)	65, 550, 621, 682
Bsp19I	CCATGG	1 cut(s)	458
Bsp68I	TCGCGA	1 cut(s)	121
BspACI	CCGC	7 cut(s)	5, 8, 11, 811, 822, 1977, 2096
BspANI	GGCC	8 cut(s)	409, 1010, 1500, 1566, 1578, 1582, 1624, 2228
BspDI	ATCGAT	1 cut(s)	49
BspFNI	CGCG	1 cut(s)	121
BspMAI	CTGCAG	1 cut(s)	2166
BspMI	ACCTGC	1 cut(s)	2031
BspPI	GGATC	1 cut(s)	73
BspQI	GCTCTTC	1 cut(s)	675
BspT107I	GGYRCC	6 cut(s)	476, 925, 1435, 1607, 1643, 1699
BsrBI	CCGCTC	1 cut(s)	1977
BsrFI	RCCGGY	1 cut(s)	1578
BsrI	ACTGG	5 cut(s)	1110, 1184, 1282, 1609, 1746
BssAI	RCCGGY	1 cut(s)	1578
BssMI	GATC	4 cut(s)	65, 550, 621, 682
BssNAI	GTATAC	1 cut(s)	36
BssNI	GRCGYC	1 cut(s)	609
BssT1I	CCWWGG	2 cut(s)	458, 1130
Bst1107I	GTATAC	1 cut(s)	36
Bst4CI	ACNGT	5 cut(s)	329, 497, 511, 1765, 1818
Bst6I	CTCTTC	1 cut(s)	675
BstACI	GRCGYC	1 cut(s)	609
BstAPI	GCANNNNNTGC	1 cut(s)	2197
BstC8I	GCNNGC	7 cut(s)	1315, 1485, 1520, 1564, 1580, 1674, 2193
BstDSI	CCRYGG	1 cut(s)	458
BstENI	CCTNNNNNAGG	2 cut(s)	1347, 1775
BstF5I	GGATG	5 cut(s)	40, 1750, 1898, 1985, 2128
BstFNI	CGCG	1 cut(s)	121
BstHHI	GCGC	3 cut(s)	324, 1170, 1885
BstKTI	GATC	4 cut(s)	68, 553, 624, 685
BstMAI	GTCTC	2 cut(s)	108, 332
BstMBI	GATC	4 cut(s)	65, 550, 621, 682
BstMCI	CGRYCG	1 cut(s)	1625
BstSFI	CTRYAG	2 cut(s)	1653, 2162
BstSLI	GKGCMC	1 cut(s)	1612
BstUI	CGCG	1 cut(s)	121
BstV1I	GCAGC	4 cut(s)	172, 1121, 1492, 1714
BstV2I	GAAGAC	1 cut(s)	512
BstX2I	RGATCY	1 cut(s)	65
BstXI	CCANNNNNNTGG	1 cut(s)	430
BstYI	RGATCY	1 cut(s)	65
BstZ17I	GTATAC	1 cut(s)	36
BstZI	CGGCCG	1 cut(s)	1622
Bsu15I	ATCGAT	1 cut(s)	49
Bsu36I	CCTNAGG	2 cut(s)	1551, 1854
BsuI	GTATCC	1 cut(s)	513
BsuRI	GGCC	8 cut(s)	409, 1010, 1500, 1566, 1578, 1582, 1624, 2228
BsuTUI	ATCGAT	1 cut(s)	49
BtgI	CCRYGG	1 cut(s)	458
BtrI	CACGTC	1 cut(s)	1067
BtsCI	GGATG	5 cut(s)	40, 1750, 1898, 1985, 2128
BtsIMutI	CAGTG	2 cut(s)	1225, 1795
BtuMI	TCGCGA	1 cut(s)	121
BveI	ACCTGC	1 cut(s)	2031
Cac8I	GCNNGC	7 cut(s)	1315, 1485, 1520, 1564, 1580, 1674, 2193
CfoI	GCGC	3 cut(s)	324, 1170, 1885
Cfr10I	RCCGGY	1 cut(s)	1578
Cfr13I	GGNCC	6 cut(s)	259, 454, 493, 968, 1322, 1498
ClaI	ATCGAT	1 cut(s)	49
CseI	GACGC	1 cut(s)	1983
CsiI	ACCWGGT	1 cut(s)	1342
Csp6I	GTAC	9 cut(s)	148, 477, 876, 926, 1084, 1299, 1602, 1700, 1896
CviAII	CATG	4 cut(s)	263, 459, 1070, 1661
CviQI	GTAC	9 cut(s)	148, 477, 876, 926, 1084, 1299, 1602, 1700, 1896
DpnI	GATC	4 cut(s)	67, 552, 623, 684
DpnII	GATC	4 cut(s)	65, 550, 621, 682
EaeI	YGGCCR	2 cut(s)	1576, 1622
EagI	CGGCCG	1 cut(s)	1622
Eam1104I	CTCTTC	1 cut(s)	675
EarI	CTCTTC	1 cut(s)	675
Ecl136II	GAGCTC	2 cut(s)	907, 961
EclXI	CGGCCG	1 cut(s)	1622
Eco130I	CCWWGG	2 cut(s)	458, 1130
Eco147I	AGGCCT	1 cut(s)	2228
Eco24I	GRGCYC	2 cut(s)	909, 963
Eco32I	GATATC	1 cut(s)	598
Eco47I	GGWCC	5 cut(s)	259, 454, 493, 968, 1322
Eco52I	CGGCCG	1 cut(s)	1622
Eco53kI	GAGCTC	2 cut(s)	907, 961
Eco57I	CTGAAG	2 cut(s)	524, 932
Eco81I	CCTNAGG	2 cut(s)	1551, 1854
Eco88I	CYCGRG	2 cut(s)	345, 1928
EcoICRI	GAGCTC	2 cut(s)	907, 961
EcoNI	CCTNNNNNAGG	2 cut(s)	1347, 1775
EcoO109I	RGGNCCY	2 cut(s)	454, 968
EcoRV	GATATC	1 cut(s)	598
EcoT14I	CCWWGG	2 cut(s)	458, 1130
EcoT38I	GRGCYC	2 cut(s)	909, 963
ErhI	CCWWGG	2 cut(s)	458, 1130
FaeI	CATG	4 cut(s)	266, 462, 1073, 1664
FalI	AAGNNNNNCTT	4 cut(s)	1070, 1102, 1937, 1969
FaqI	GGGAC	2 cut(s)	440, 1308
FatI	CATG	4 cut(s)	262, 458, 1069, 1660
FauNDI	CATATG	1 cut(s)	1013
FblI	GTMKAC	1 cut(s)	35
Fnu4HI	GCNGC	8 cut(s)	6, 9, 12, 161, 812, 1110, 1481, 1728
FokI	GGATG	5 cut(s)	27, 1757, 1885, 1992, 2135
FriOI	GRGCYC	2 cut(s)	909, 963
FseI	GGCCGGCC	1 cut(s)	1582
Fsp4HI	GCNGC	8 cut(s)	6, 9, 12, 161, 812, 1110, 1481, 1728
FspBI	CTAG	9 cut(s)	153, 405, 468, 569, 1572, 1584, 1677, 2178, 2245
GlaI	GCGC	3 cut(s)	323, 1169, 1884
GluI	GCNGC	8 cut(s)	6, 9, 12, 161, 812, 1110, 1481, 1728
GsuI	CTGGAG	4 cut(s)	132, 1707, 1824, 1907
HaeIII	GGCC	8 cut(s)	409, 1010, 1500, 1566, 1578, 1582, 1624, 2228
HapII	CCGG	5 cut(s)	313, 539, 703, 1365, 1579
HgaI	GACGC	1 cut(s)	1983
HhaI	GCGC	3 cut(s)	324, 1170, 1885
Hin1I	GRCGYC	1 cut(s)	609
Hin1II	CATG	4 cut(s)	266, 462, 1073, 1664
Hin6I	GCGC	3 cut(s)	322, 1168, 1883
HinP1I	GCGC	3 cut(s)	322, 1168, 1883
HindIII	AAGCTT	1 cut(s)	1922
HpaII	CCGG	5 cut(s)	313, 539, 703, 1365, 1579
HphI	GGTGA	3 cut(s)	1213, 1475, 2060
Hpy166II	GTNNAC	6 cut(s)	36, 137, 150, 1040, 1075, 1534
Hpy188I	TCNGA	8 cut(s)	45, 215, 487, 682, 715, 2139, 2218, 2235
Hpy8I	GTNNAC	6 cut(s)	36, 137, 150, 1040, 1075, 1534
Hpy99I	CGWCG	1 cut(s)	333
HpyAV	CCTTC	8 cut(s)	429, 465, 508, 1093, 1336, 1942, 2107, 2193
HpyCH4III	ACNGT	5 cut(s)	329, 497, 511, 1765, 1818
HpyCH4IV	ACGT	7 cut(s)	139, 609, 844, 1002, 1066, 1258, 1526
HpyCH4V	TGCA	7 cut(s)	102, 1480, 1597, 1730, 2016, 2156, 2164
HpySE526I	ACGT	7 cut(s)	139, 609, 844, 1002, 1066, 1258, 1526
Hsp92I	GRCGYC	1 cut(s)	609
Hsp92II	CATG	4 cut(s)	266, 462, 1073, 1664
HspAI	GCGC	3 cut(s)	322, 1168, 1883
KpnI	GGTACC	3 cut(s)	480, 929, 1703
KroI	GCCGGC	1 cut(s)	1578
KroNI	GCCGGC	1 cut(s)	1580
Kzo9I	GATC	4 cut(s)	65, 550, 621, 682
LguI	GCTCTTC	1 cut(s)	675
Lsp1109I	GCAGC	4 cut(s)	172, 1121, 1492, 1714
LweI	GCATC	4 cut(s)	1350, 1386, 1494, 2222
MabI	ACCWGGT	1 cut(s)	1342
MaeI	CTAG	9 cut(s)	153, 405, 468, 569, 1572, 1584, 1677, 2178, 2245
MaeII	ACGT	7 cut(s)	139, 609, 844, 1002, 1066, 1258, 1526
MaeIII	GTNAC	2 cut(s)	1545, 1964
MalI	GATC	4 cut(s)	67, 552, 623, 684
MbiI	CCGCTC	1 cut(s)	1977
MboI	GATC	4 cut(s)	65, 550, 621, 682
MboII	GAAGA	6 cut(s)	517, 662, 815, 931, 946, 1405
MfeI	CAATTG	2 cut(s)	763, 1426
MflI	RGATCY	1 cut(s)	65
MhlI	GDGCHC	3 cut(s)	909, 963, 1612
MlyI	GAGTC	3 cut(s)	110, 1658, 2245
MmeI	TCCRAC	4 cut(s)	447, 1197, 2056, 2213
MroNI	GCCGGC	1 cut(s)	1578
MroXI	GAANNNNTTC	1 cut(s)	696
MseI	TTAA	6 cut(s)	207, 558, 687, 896, 2066, 2091
MslI	CAYNNNNRTG	2 cut(s)	953, 1816
MspA1I	CMGCKG	2 cut(s)	1487, 1727
MspI	CCGG	5 cut(s)	313, 539, 703, 1365, 1579
MunI	CAATTG	2 cut(s)	763, 1426
MvnI	CGCG	1 cut(s)	121
NaeI	GCCGGC	1 cut(s)	1580
NciI	CCSGG	3 cut(s)	314, 703, 1365
NcoI	CCATGG	1 cut(s)	458
NdeI	CATATG	1 cut(s)	1013
NdeII	GATC	4 cut(s)	65, 550, 621, 682
NgoMIV	GCCGGC	1 cut(s)	1578
NlaIII	CATG	4 cut(s)	266, 462, 1073, 1664
NmeAIII	GCCGAG	4 cut(s)	256, 475, 569, 1600
NmuCI	GTSAC	1 cut(s)	1964
NruI	TCGCGA	1 cut(s)	121
PaeR7I	CTCGAG	1 cut(s)	1928
PasI	CCCWGGG	1 cut(s)	255
PceI	AGGCCT	1 cut(s)	2228
PciSI	GCTCTTC	1 cut(s)	675
PdiI	GCCGGC	1 cut(s)	1580
PdmI	GAANNNNTTC	1 cut(s)	696
PfeI	GAWTC	8 cut(s)	46, 871, 1054, 1246, 1378, 1444, 2174, 2204
PflMI	CCANNNNNTGG	2 cut(s)	1179, 1514
PfoI	TCCNGGA	1 cut(s)	1381
PkrI	GCNGC	8 cut(s)	7, 10, 13, 162, 813, 1111, 1482, 1729
PleI	GAGTC	3 cut(s)	110, 1657, 2244
PpsI	GAGTC	3 cut(s)	110, 1657, 2244
PpuMI	RGGWCCY	2 cut(s)	454, 968
PshBI	ATTAAT	1 cut(s)	2066
Psp124BI	GAGCTC	2 cut(s)	909, 963
Psp5II	RGGWCCY	2 cut(s)	454, 968
PspPI	GGNCC	6 cut(s)	259, 454, 493, 968, 1322, 1498
PspPPI	RGGWCCY	2 cut(s)	454, 968
PstI	CTGCAG	1 cut(s)	2166
PsuI	RGATCY	1 cut(s)	65
PvuII	CAGCTG	2 cut(s)	1487, 1727
RigI	GGCCGGCC	1 cut(s)	1582
RruI	TCGCGA	1 cut(s)	121
RsaI	GTAC	9 cut(s)	149, 478, 877, 927, 1085, 1300, 1603, 1701, 1897
RsaNI	GTAC	9 cut(s)	148, 477, 876, 926, 1084, 1299, 1602, 1700, 1896
RseI	CAYNNNNRTG	2 cut(s)	953, 1816
SacI	GAGCTC	2 cut(s)	909, 963
SapI	GCTCTTC	1 cut(s)	675
SaqAI	TTAA	6 cut(s)	207, 558, 687, 896, 2066, 2091
SatI	GCNGC	8 cut(s)	6, 9, 12, 161, 812, 1110, 1481, 1728
Sau3AI	GATC	4 cut(s)	65, 550, 621, 682
Sau96I	GGNCC	6 cut(s)	259, 454, 493, 968, 1322, 1498
SchI	GAGTC	3 cut(s)	110, 1658, 2245
SduI	GDGCHC	3 cut(s)	909, 963, 1612
SexAI	ACCWGGT	1 cut(s)	1342
SfaNI	GCATC	4 cut(s)	1350, 1386, 1494, 2222
SfcI	CTRYAG	2 cut(s)	1653, 2162
Sfr274I	CTCGAG	1 cut(s)	1928
SinI	GGWCC	5 cut(s)	259, 454, 493, 968, 1322
SlaI	CTCGAG	1 cut(s)	1928
SmiMI	CAYNNNNRTG	2 cut(s)	953, 1816
SmlI	CTYRAG	2 cut(s)	1302, 1928
SmoI	CTYRAG	2 cut(s)	1302, 1928
SpeI	ACTAGT	1 cut(s)	1571
SseBI	AGGCCT	1 cut(s)	2228
SsiI	CCGC	7 cut(s)	5, 8, 11, 811, 822, 1977, 2096
SspI	AATATT	2 cut(s)	401, 1784
SspMI	CTAG	9 cut(s)	153, 405, 468, 569, 1572, 1584, 1677, 2178, 2245
SstI	GAGCTC	2 cut(s)	909, 963
StuI	AGGCCT	1 cut(s)	2228
StyI	CCWWGG	2 cut(s)	458, 1130
TaaI	ACNGT	5 cut(s)	329, 497, 511, 1765, 1818
TaiI	ACGT	7 cut(s)	142, 612, 847, 1005, 1069, 1261, 1529
TaqI	TCGA	4 cut(s)	49, 95, 1736, 1929
TaqII	GACCGA	2 cut(s)	1107, 1437
TatI	WGTACW	1 cut(s)	1895
TauI	GCSGC	4 cut(s)	8, 11, 14, 814
TfiI	GAWTC	8 cut(s)	46, 871, 1054, 1246, 1378, 1444, 2174, 2204
Tru1I	TTAA	6 cut(s)	207, 558, 687, 896, 2066, 2091
Tru9I	TTAA	6 cut(s)	207, 558, 687, 896, 2066, 2091
TscAI	CASTG	2 cut(s)	1225, 1795
TseFI	GTSAC	1 cut(s)	1964
TseI	GCWGC	4 cut(s)	160, 1109, 1480, 1727
Tsp45I	GTSAC	1 cut(s)	1964
TspDTI	ATGAA	5 cut(s)	213, 279, 705, 1761, 1821
TspRI	CASTG	2 cut(s)	1225, 1795
Van91I	CCANNNNNTGG	2 cut(s)	1179, 1514
VpaK11BI	GGWCC	5 cut(s)	259, 454, 493, 968, 1322
VspI	ATTAAT	1 cut(s)	2066
XagI	CCTNNNNNAGG	2 cut(s)	1347, 1775
XapI	RAATTY	2 cut(s)	1797, 1834
XhoI	CTCGAG	1 cut(s)	1928
XmiI	GTMKAC	1 cut(s)	35
XmnI	GAANNNNTTC	1 cut(s)	696
XspI	CTAG	9 cut(s)	153, 405, 468, 569, 1572, 1584, 1677, 2178, 2245
ZraI	GACGTC	1 cut(s)	610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.