Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0003545

Physical Location & Seq

Genomic Coordinates Forward (+)

727651 .. 733135

Gene Structure 5485 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG009900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGATACTTTGTTGTGTGCTTTACATATGGGTTTTATTTTTTCCTCTTCAGTTGCCAAATCAACCGGCTCATTATCCGGAGCCAGACAACCGGGATTGGCGCAACCGTCGTGCTCCAGTTCCTGAGACACTTAGGGAGAATAGAGAGCCTGGTAATTACAGACAGCAGGAAGCAAATCAGCAGCAATATCCGAGGGCACAAAACTCTTCCAACCAAGGGGGAGGGGCTGTTCCTGCTCTAGTAAAAGCTGAGGTCCCATGGTCAGCTAGAAGGGGTACCCTATCTGACAAGGACCGTGTGGTGAAGACTGTTAAGGGGATACTGAACAAGCTGACCCCAGAGAAGTTTGATCTCCTTAAAGGACAGCTAGTAGACTCTGGAATTACCTCGGCTGATATTCTAAAGGAAGTCATTGAATTGATCTTCGATAAGGCTGTGCTGGAACCTACATTTTGTCCAATGTATGCTCGTCTATGCTCTGATCTTAATGAAAGGCTTCCCCGGTTCCCATCAGAGGAACCAGATGGAAAAGAAATCACTTTCAAGCGTGTCCTCTTGAACAATTGCCAAGAGGCTTTTGATGGTGCTGACAAGTTGAGGGAAGAAGTGCGGCAGATGACTGCCCCTGAACAAGAGATGGAACGTAGGGATAAAGAAAGATTGGCTAAGATACGTACTCTGGGAAACATTCGTTTAATTGGAGAGCTCCTGAAGCAGAAGATGGTACCTGAAAAGATTGTCCATCACATTGTTGCGGAGCTCTTAGGAGCTGACAACAACATTTGTCCTGCTGAGGAAAATGTTGAGGCCATATGCCATTTTTTTACCACTATTGGTAAACAGCTTGATGAGAATCAAAAATCACGTCGTATAAATGATTTGTACTTCGGCCGATTGAAGGAACTGACAACAAACCCTCAGTTGGCTCCAAGGCTGAGGTTCATGGTTCGGGATGTAATTGATTTGCGCTCCAACAACTGGGTTCCCAGGCGTGAGGAGGTGAAAGCCAAAACCATCAGTGAAATACATACAGAGGCAGAAAAGAATCTTGGATTACGTCCTGGTAGCACTAGAACTGGTCGTGGCAACTTTGCTGGTACTCAAGGGAGTACCAGCCCTGGGCCCTTCTCCAACAGCCGACCTGGTTCAGGGGGTATGATGCCTGGTATGCCTGGGTTTCCAGGAACTAGGAAGATGCCTGGTATGCCTGGAATGGACAATGACAATTGGGAGGTGTCTAAGACCCGGTCAATGCCAAGAGGTGATGGTTCTGGTATGCAGCCAGCTGGGCGTGGGGGCCAGATGCCATTAATTGGCAAATCAACATCGGTGAACACAAGGCTGTTACCTCAGGGTAGTAGTGGCCTTACAAGTGGACGCCCTAGTGCCTTGTTGCAGGGTAGTGGTGCTCCTCCTGCTCGCCCAAGCAACTACTCTTTCGAAACTGAGCCTGTAGCCCAGGTTCCTGTGCCTGCTAGACCTGTTCCTACTGCACCTGTATCACGACCTGTTGAAAAGCCACAAGCTCCAGCTTCAAAGTTGAAAGTAGATGAACTTAGGAAAAAAACAGTTTCTCTTTTGGAGGAATATTTCAGTGTGCGAATTTTAGATGAAGCATTACTGTGCGTGGAGGAGCTAAGATCTCCAGCTTACCACCCTGAGGTTGTCAAAGAAGCTATCTCCCTTGCGCTGGAGAAAAGTACATCCTATGTTGAACCACTTTTTAAGCTTCTCGAGCATTTGTTCTCTAAGAAGGTCATTACAGCGAGTGACATAAGGAGTGGATGTTTGCTCTATGCATCTTTGCTGAGTGATATCGGCATTGATTATCCTAAAGCACCGAGTTATTTTGGTGAAGTTGTGGGAAAATTAATTGTAGTTGGAGCTTTGGATTTTAAGGTGGTGAAAGAGGTTTTGAAGGTGGTGGATGATGACTACTATCAGAAAGCCATATTCAATGCAGGACTGCAGGTTATTAGTTCTAGCCCTTCGGGGCAAGCTGTGCTGGATTCACAAGCATCTGATATTGAGGCCTGCCGGAGTCTCTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03013 ko05416 map03013 map05416

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

683

Amino Acids

75.75

Weight (kDa)

8.7

Isoelectric Point (pI)

54.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIF4G	PF02854	102 - 326	2.4e-55	MIF4G domain
MA3	PF02847	519 - 631	2.9e-28	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003545)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57870 AT5G57870
fragaria_vesca	FvH4_1g00720 FvH4_1g00720 FvH4_2g41200
malus_domestica	MD02G1005900.v1.1 MD02G1006000.v1.1 MD08G1055400.v1.1 MD15G1150600.v1.1
prunus_persica	Prupe.1G395100_v2.0.a1 Prupe.7G265100_v2.0.a1
pyrus_communis	pycom02g00490 pycom08g04550 pycom14g07580 pycom15g13480
rosa_chinensis	RchiOBHm_Chr2g0085441 RchiOBHm_Chr6g0299311
rosa_laevigata	RLG00000011443 RLG00000015688
rosa_multiflora	Rmu_sc0007908.1_g000012 Rmu_ssc0000374.1_g000005
rosa_roxburghii	Rroxscaffold_2G00155380 Rroxscaffold_7G00168790
rosa_rugosa	Rorug01G0460400 Rorug06G0287100
rosa_samantha	Rh2AG008600 Rh2BG009900 Rh2CG010400 Rh2DG010800 Rh6AG398600 Rh6BG407000 Rh6CG413000 Rh6DG399800
rosa_wichuraiana	Rw2G000830 Rw6G034890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1960
Acc65I	GGTACC	2 cut(s)	275, 724
AccB1I	GGYRCC	2 cut(s)	275, 724
AccB7I	CCANNNNNTGG	2 cut(s)	978, 1313
AccI	GTMKAC	1 cut(s)	372
AccIII	TCCGGA	1 cut(s)	76
AciI	CCGC	2 cut(s)	610, 755
AcoI	YGGCCR	1 cut(s)	889
AcsI	RAATTY	1 cut(s)	1602
AcuI	CTGAAG	2 cut(s)	32, 731
AcyI	GRCGYC	1 cut(s)	1378
AfaI	GTAC	7 cut(s)	277, 676, 726, 884, 1099, 1111, 1702
AjiI	CACGTC	1 cut(s)	866
AjuI	GAANNNNNNNTTGG	2 cut(s)	1032, 1064
AloI	GAACNNNNNNTCC	2 cut(s)	213, 245
Alw21I	GWGCWC	4 cut(s)	115, 708, 762, 1411
Alw26I	GTCTC	2 cut(s)	119, 2048
AlwNI	CAGNNNCTG	1 cut(s)	122
Ama87I	CYCGRG	1 cut(s)	1733
Aor13HI	TCCGGA	1 cut(s)	76
AoxI	GGCC	6 cut(s)	807, 889, 1121, 1297, 1363, 2031
ApaI	GGGCCC	1 cut(s)	1125
ApeKI	GCWGC	2 cut(s)	181, 1279
ApoI	RAATTY	1 cut(s)	1602
ArsI	GACNNNNNNTTYG	2 cut(s)	850, 882
AseI	ATTAAT	2 cut(s)	1310, 1871
Asp700I	GAANNNNTTC	1 cut(s)	495
Asp718I	GGTACC	2 cut(s)	275, 724
AspLEI	GCGC	3 cut(s)	102, 969, 1690
AspS9I	GGNCC	5 cut(s)	253, 292, 1121, 1122, 1297
AsuC2I	CCSGG	3 cut(s)	92, 502, 1246
AsuHPI	GGTGA	6 cut(s)	313, 1012, 1274, 1342, 1865, 1915
AsuII	TTCGAA	1 cut(s)	1440
AvaI	CYCGRG	1 cut(s)	1733
AvaII	GGWCC	2 cut(s)	253, 292
AxyI	CCTNAGG	2 cut(s)	1350, 1659
BaeGI	GKGCMC	2 cut(s)	199, 1125
BanI	GGYRCC	2 cut(s)	275, 724
BanII	GRGCYC	3 cut(s)	708, 762, 1125
BbsI	GAAGAC	1 cut(s)	311
Bbv12I	GWGCWC	4 cut(s)	115, 708, 762, 1411
BbvCI	CCTCAGC	3 cut(s)	249, 792, 935
BbvI	GCAGC	2 cut(s)	193, 1291
BccI	CCATC	8 cut(s)	517, 518, 575, 631, 715, 750, 1022, 1259
BciVI	GTATCC	1 cut(s)	312
BcnI	CCSGG	3 cut(s)	92, 502, 1246
BcoDI	GTCTC	2 cut(s)	119, 2048
BfaI	CTAG	9 cut(s)	239, 267, 368, 1071, 1188, 1383, 1476, 1983, 2050
BfmI	CTRYAG	2 cut(s)	1452, 1967
BfuAI	ACCTGC	1 cut(s)	1960
BfuI	GTATCC	1 cut(s)	312
BglI	GCCNNNNNGGC	1 cut(s)	1288
BglII	AGATCT	1 cut(s)	1640
BisI	GCNGC	3 cut(s)	182, 611, 1280
BlsI	GCNGC	3 cut(s)	183, 612, 1281
Bme18I	GGWCC	2 cut(s)	253, 292
BmeT110I	CYCGRG	1 cut(s)	1733
BmgBI	CACGTC	1 cut(s)	866
BmgT120I	GGNCC	5 cut(s)	253, 292, 1121, 1122, 1297
BmrI	ACTGGG	1 cut(s)	988
BmsI	GCATC	5 cut(s)	1149, 1185, 1293, 1808, 2027
BmuI	ACTGGG	1 cut(s)	988
BpiI	GAAGAC	1 cut(s)	311
BpmI	CTGGAG	4 cut(s)	99, 1512, 1629, 1712
Bpu10I	CCTNAGC	3 cut(s)	249, 792, 935
Bpu14I	TTCGAA	1 cut(s)	1440
BpuEI	CTTGAG	1 cut(s)	1086
BpuMI	CCSGG	3 cut(s)	92, 502, 1246
BsaAI	YACGTR	1 cut(s)	674
BsaBI	GATNNNNATC	1 cut(s)	852
BsaHI	GRCGYC	1 cut(s)	1378
BsaWI	WCCGGW	1 cut(s)	76
BsaXI	ACNNNNNCTCC	4 cut(s)	213, 243, 1771, 1801
Bse118I	RCCGGY	1 cut(s)	64
Bse1I	ACTGG	3 cut(s)	116, 983, 1081
Bse21I	CCTNAGG	2 cut(s)	1350, 1659
Bse8I	GATNNNNATC	1 cut(s)	852
BseAI	TCCGGA	1 cut(s)	76
BseGI	GGATG	4 cut(s)	958, 1703, 1790, 1933
BseJI	GATNNNNATC	1 cut(s)	852
BseMII	CTCAG	9 cut(s)	114, 240, 783, 926, 932, 1364, 1437, 1650, 1799
BseNI	ACTGG	3 cut(s)	116, 983, 1081
BseRI	GAGGAG	3 cut(s)	1010, 1401, 1646
BseSI	GKGCMC	2 cut(s)	199, 1125
BseX3I	CGGCCG	1 cut(s)	889
BseXI	GCAGC	2 cut(s)	193, 1291
BseYI	CCCAGC	1 cut(s)	1286
BsgI	GTGCAG	1 cut(s)	1476
Bsh1285I	CGRYCG	1 cut(s)	892
BshFI	GGCC	6 cut(s)	809, 891, 1123, 1299, 1365, 2033
BshNI	GGYRCC	2 cut(s)	275, 724
BsiEI	CGRYCG	1 cut(s)	892
BsiHKAI	GWGCWC	4 cut(s)	115, 708, 762, 1411
BsiHKCI	CYCGRG	1 cut(s)	1733
BsiSI	CCGG	6 cut(s)	65, 77, 91, 502, 1246, 2038
BslFI	GGGAC	1 cut(s)	239
BsmAI	GTCTC	2 cut(s)	119, 2048
BsmFI	GGGAC	1 cut(s)	239
BsnI	GGCC	6 cut(s)	809, 891, 1123, 1299, 1365, 2033
BsoBI	CYCGRG	1 cut(s)	1733
Bsp119I	TTCGAA	1 cut(s)	1440
Bsp120I	GGGCCC	1 cut(s)	1121
Bsp1286I	GDGCHC	6 cut(s)	115, 199, 708, 762, 1125, 1411
Bsp13I	TCCGGA	1 cut(s)	76
Bsp143I	GATC	4 cut(s)	349, 420, 481, 1640
Bsp19I	CCATGG	1 cut(s)	257
BspACI	CCGC	2 cut(s)	610, 755
BspANI	GGCC	6 cut(s)	809, 891, 1123, 1299, 1365, 2033
BspCNI	CTCAG	9 cut(s)	115, 241, 784, 927, 931, 1363, 1438, 1651, 1800
BspEI	TCCGGA	1 cut(s)	76
BspMAI	CTGCAG	1 cut(s)	1971
BspMI	ACCTGC	1 cut(s)	1960
BspT104I	TTCGAA	1 cut(s)	1440
BspT107I	GGYRCC	2 cut(s)	275, 724
BsrFI	RCCGGY	1 cut(s)	64
BsrI	ACTGG	3 cut(s)	116, 983, 1081
BssAI	RCCGGY	1 cut(s)	64
BssMI	GATC	4 cut(s)	349, 420, 481, 1640
BssNI	GRCGYC	1 cut(s)	1378
BssT1I	CCWWGG	3 cut(s)	214, 257, 929
Bst4CI	ACNGT	5 cut(s)	107, 296, 310, 1570, 1623
Bst6I	CTCTTC	2 cut(s)	51, 211
BstACI	GRCGYC	1 cut(s)	1378
BstAPI	GCANNNNNTGC	1 cut(s)	2002
BstBAI	YACGTR	1 cut(s)	674
BstBI	TTCGAA	1 cut(s)	1440
BstC8I	GCNNGC	5 cut(s)	1284, 1420, 1473, 1998, 2035
BstDSI	CCRYGG	1 cut(s)	257
BstENI	CCTNNNNNAGG	1 cut(s)	1146
BstF5I	GGATG	4 cut(s)	958, 1703, 1790, 1933
BstHHI	GCGC	3 cut(s)	102, 969, 1690
BstKTI	GATC	4 cut(s)	352, 423, 484, 1643
BstMAI	GTCTC	2 cut(s)	119, 2048
BstMBI	GATC	4 cut(s)	349, 420, 481, 1640
BstMCI	CGRYCG	1 cut(s)	892
BstMWI	GCNNNNNNNGC	8 cut(s)	233, 712, 1168, 1204, 1288, 1415, 1735, 2002
BstSFI	CTRYAG	2 cut(s)	1452, 1967
BstSLI	GKGCMC	2 cut(s)	199, 1125
BstSNI	TACGTA	1 cut(s)	674
BstV1I	GCAGC	2 cut(s)	193, 1291
BstV2I	GAAGAC	1 cut(s)	311
BstX2I	RGATCY	1 cut(s)	1640
BstYI	RGATCY	1 cut(s)	1640
BstZI	CGGCCG	1 cut(s)	889
Bsu36I	CCTNAGG	2 cut(s)	1350, 1659
BsuI	GTATCC	1 cut(s)	312
BsuRI	GGCC	6 cut(s)	809, 891, 1123, 1299, 1365, 2033
BtgI	CCRYGG	1 cut(s)	257
BtrI	CACGTC	1 cut(s)	866
BtsCI	GGATG	4 cut(s)	958, 1703, 1790, 1933
BtsIMutI	CAGTG	2 cut(s)	1024, 1600
BveI	ACCTGC	1 cut(s)	1960
Cac8I	GCNNGC	5 cut(s)	1284, 1420, 1473, 1998, 2035
CaiI	CAGNNNCTG	1 cut(s)	122
CfoI	GCGC	3 cut(s)	102, 969, 1690
Cfr10I	RCCGGY	1 cut(s)	64
Cfr13I	GGNCC	5 cut(s)	253, 292, 1121, 1122, 1297
CseI	GACGC	1 cut(s)	1386
CsiI	ACCWGGT	1 cut(s)	1141
Csp6I	GTAC	7 cut(s)	276, 675, 725, 883, 1098, 1110, 1701
CviAII	CATG	2 cut(s)	258, 943
CviQI	GTAC	7 cut(s)	276, 675, 725, 883, 1098, 1110, 1701
DpnI	GATC	4 cut(s)	351, 422, 483, 1642
DpnII	GATC	4 cut(s)	349, 420, 481, 1640
EaeI	YGGCCR	1 cut(s)	889
EagI	CGGCCG	1 cut(s)	889
Eam1104I	CTCTTC	2 cut(s)	51, 211
EarI	CTCTTC	2 cut(s)	51, 211
Ecl136II	GAGCTC	2 cut(s)	706, 760
EclXI	CGGCCG	1 cut(s)	889
Eco105I	TACGTA	1 cut(s)	674
Eco130I	CCWWGG	3 cut(s)	214, 257, 929
Eco147I	AGGCCT	1 cut(s)	2033
Eco24I	GRGCYC	3 cut(s)	708, 762, 1125
Eco32I	GATATC	1 cut(s)	1816
Eco47I	GGWCC	2 cut(s)	253, 292
Eco52I	CGGCCG	1 cut(s)	889
Eco53kI	GAGCTC	2 cut(s)	706, 760
Eco57I	CTGAAG	2 cut(s)	32, 731
Eco81I	CCTNAGG	2 cut(s)	1350, 1659
Eco88I	CYCGRG	1 cut(s)	1733
EcoICRI	GAGCTC	2 cut(s)	706, 760
EcoNI	CCTNNNNNAGG	1 cut(s)	1146
EcoO109I	RGGNCCY	2 cut(s)	253, 1122
EcoRV	GATATC	1 cut(s)	1816
EcoT14I	CCWWGG	3 cut(s)	214, 257, 929
EcoT22I	ATGCAT	1 cut(s)	1801
EcoT38I	GRGCYC	3 cut(s)	708, 762, 1125
ErhI	CCWWGG	3 cut(s)	214, 257, 929
FaeI	CATG	2 cut(s)	261, 946
FaqI	GGGAC	1 cut(s)	239
FatI	CATG	2 cut(s)	257, 942
FauNDI	CATATG	2 cut(s)	26, 812
FblI	GTMKAC	1 cut(s)	372
Fnu4HI	GCNGC	3 cut(s)	182, 611, 1280
FokI	GGATG	4 cut(s)	965, 1690, 1797, 1940
FriOI	GRGCYC	3 cut(s)	708, 762, 1125
Fsp4HI	GCNGC	3 cut(s)	182, 611, 1280
FspBI	CTAG	9 cut(s)	239, 267, 368, 1071, 1188, 1383, 1476, 1983, 2050
GlaI	GCGC	3 cut(s)	101, 968, 1689
GluI	GCNGC	3 cut(s)	182, 611, 1280
GsaI	CCCAGC	1 cut(s)	1290
GsuI	CTGGAG	4 cut(s)	99, 1512, 1629, 1712
HaeIII	GGCC	6 cut(s)	809, 891, 1123, 1299, 1365, 2033
HapII	CCGG	6 cut(s)	65, 77, 91, 502, 1246, 2038
HgaI	GACGC	1 cut(s)	1386
HhaI	GCGC	3 cut(s)	102, 969, 1690
Hin1I	GRCGYC	1 cut(s)	1378
Hin1II	CATG	2 cut(s)	261, 946
Hin6I	GCGC	3 cut(s)	100, 967, 1688
HinP1I	GCGC	3 cut(s)	100, 967, 1688
HindIII	AAGCTT	1 cut(s)	1727
HinfI	GANTC	5 cut(s)	374, 853, 1045, 2009, 2041
HpaII	CCGG	6 cut(s)	65, 77, 91, 502, 1246, 2038
HphI	GGTGA	6 cut(s)	313, 1012, 1274, 1342, 1865, 1915
Hpy166II	GTNNAC	4 cut(s)	373, 839, 1333, 1376
Hpy188I	TCNGA	6 cut(s)	192, 286, 481, 514, 1944, 2023
Hpy188III	TCNNGA	8 cut(s)	77, 122, 378, 556, 709, 950, 1503, 1733
Hpy8I	GTNNAC	4 cut(s)	373, 839, 1333, 1376
Hpy99I	CGWCG	2 cut(s)	111, 870
HpyAV	CCTTC	6 cut(s)	264, 892, 1135, 1747, 1912, 1998
HpyCH4III	ACNGT	5 cut(s)	107, 296, 310, 1570, 1623
HpyCH4IV	ACGT	4 cut(s)	643, 673, 865, 1057
HpyCH4V	TGCA	6 cut(s)	1279, 1396, 1493, 1799, 1961, 1969
HpyF10VI	GCNNNNNNNGC	8 cut(s)	233, 712, 1168, 1204, 1288, 1415, 1735, 2002
HpySE526I	ACGT	4 cut(s)	643, 673, 865, 1057
Hsp92I	GRCGYC	1 cut(s)	1378
Hsp92II	CATG	2 cut(s)	261, 946
HspAI	GCGC	3 cut(s)	100, 967, 1688
Kpn2I	TCCGGA	1 cut(s)	76
KpnI	GGTACC	2 cut(s)	279, 728
Kzo9I	GATC	4 cut(s)	349, 420, 481, 1640
Lsp1109I	GCAGC	2 cut(s)	193, 1291
LweI	GCATC	5 cut(s)	1149, 1185, 1293, 1808, 2027
MabI	ACCWGGT	1 cut(s)	1141
MaeI	CTAG	9 cut(s)	239, 267, 368, 1071, 1188, 1383, 1476, 1983, 2050
MaeII	ACGT	4 cut(s)	643, 673, 865, 1057
MaeIII	GTNAC	2 cut(s)	1344, 1769
MalI	GATC	4 cut(s)	351, 422, 483, 1642
MboI	GATC	4 cut(s)	349, 420, 481, 1640
MboII	GAAGA	8 cut(s)	38, 198, 316, 415, 614, 730, 1204, 2038
MfeI	CAATTG	2 cut(s)	562, 1225
MflI	RGATCY	1 cut(s)	1640
MhlI	GDGCHC	6 cut(s)	115, 199, 708, 762, 1125, 1411
MlyI	GAGTC	2 cut(s)	368, 2050
MmeI	TCCRAC	4 cut(s)	234, 996, 1155, 1861
Mph1103I	ATGCAT	1 cut(s)	1801
MroI	TCCGGA	1 cut(s)	76
MroXI	GAANNNNTTC	1 cut(s)	495
MseI	TTAA	8 cut(s)	312, 357, 486, 695, 1310, 1725, 1871, 1896
MslI	CAYNNNNRTG	1 cut(s)	1621
MspA1I	CMGCKG	1 cut(s)	1286
MspI	CCGG	6 cut(s)	65, 77, 91, 502, 1246, 2038
MunI	CAATTG	2 cut(s)	562, 1225
MwoI	GCNNNNNNNGC	8 cut(s)	233, 712, 1168, 1204, 1288, 1415, 1735, 2002
NciI	CCSGG	3 cut(s)	92, 502, 1246
NcoI	CCATGG	1 cut(s)	257
NdeI	CATATG	2 cut(s)	26, 812
NdeII	GATC	4 cut(s)	349, 420, 481, 1640
NlaIII	CATG	2 cut(s)	261, 946
NmeAIII	GCCGAG	1 cut(s)	368
NmuCI	GTSAC	1 cut(s)	1769
NsiI	ATGCAT	1 cut(s)	1801
NspV	TTCGAA	1 cut(s)	1440
PaeR7I	CTCGAG	1 cut(s)	1733
PasI	CCCWGGG	1 cut(s)	1118
PceI	AGGCCT	1 cut(s)	2033
PdmI	GAANNNNTTC	1 cut(s)	495
PfeI	GAWTC	3 cut(s)	853, 1045, 2009
PflFI	GACNNNGTC	1 cut(s)	1246
PflMI	CCANNNNNTGG	2 cut(s)	978, 1313
PfoI	TCCNGGA	1 cut(s)	1180
PkrI	GCNGC	3 cut(s)	183, 612, 1281
PleI	GAGTC	2 cut(s)	368, 2049
PpsI	GAGTC	2 cut(s)	368, 2049
Ppu21I	YACGTR	1 cut(s)	674
PpuMI	RGGWCCY	1 cut(s)	253
PshBI	ATTAAT	2 cut(s)	1310, 1871
Psp124BI	GAGCTC	2 cut(s)	708, 762
Psp5II	RGGWCCY	1 cut(s)	253
PspFI	CCCAGC	1 cut(s)	1286
PspOMI	GGGCCC	1 cut(s)	1121
PspPI	GGNCC	5 cut(s)	253, 292, 1121, 1122, 1297
PspPPI	RGGWCCY	1 cut(s)	253
PsrI	GAACNNNNNNTAC	2 cut(s)	1446, 1478
PstI	CTGCAG	1 cut(s)	1971
PstNI	CAGNNNCTG	1 cut(s)	122
PsuI	RGATCY	1 cut(s)	1640
PsyI	GACNNNGTC	1 cut(s)	1246
PvuII	CAGCTG	1 cut(s)	1286
RsaI	GTAC	7 cut(s)	277, 676, 726, 884, 1099, 1111, 1702
RsaNI	GTAC	7 cut(s)	276, 675, 725, 883, 1098, 1110, 1701
RseI	CAYNNNNRTG	1 cut(s)	1621
SacI	GAGCTC	2 cut(s)	708, 762
SaqAI	TTAA	8 cut(s)	312, 357, 486, 695, 1310, 1725, 1871, 1896
SatI	GCNGC	3 cut(s)	182, 611, 1280
Sau3AI	GATC	4 cut(s)	349, 420, 481, 1640
Sau96I	GGNCC	5 cut(s)	253, 292, 1121, 1122, 1297
SchI	GAGTC	2 cut(s)	368, 2050
SduI	GDGCHC	6 cut(s)	115, 199, 708, 762, 1125, 1411
SexAI	ACCWGGT	1 cut(s)	1141
SfaNI	GCATC	5 cut(s)	1149, 1185, 1293, 1808, 2027
SfcI	CTRYAG	2 cut(s)	1452, 1967
Sfr274I	CTCGAG	1 cut(s)	1733
SfuI	TTCGAA	1 cut(s)	1440
SinI	GGWCC	2 cut(s)	253, 292
SlaI	CTCGAG	1 cut(s)	1733
SmiMI	CAYNNNNRTG	1 cut(s)	1621
SmlI	CTYRAG	2 cut(s)	1101, 1733
SmoI	CTYRAG	2 cut(s)	1101, 1733
SnaBI	TACGTA	1 cut(s)	674
SseBI	AGGCCT	1 cut(s)	2033
SsiI	CCGC	2 cut(s)	610, 755
SspI	AATATT	1 cut(s)	1589
SspMI	CTAG	9 cut(s)	239, 267, 368, 1071, 1188, 1383, 1476, 1983, 2050
SstI	GAGCTC	2 cut(s)	708, 762
StuI	AGGCCT	1 cut(s)	2033
StyI	CCWWGG	3 cut(s)	214, 257, 929
TaaI	ACNGT	5 cut(s)	107, 296, 310, 1570, 1623
TaiI	ACGT	4 cut(s)	646, 676, 868, 1060
TaqI	TCGA	3 cut(s)	426, 1440, 1734
TatI	WGTACW	2 cut(s)	882, 1700
TauI	GCSGC	1 cut(s)	613
TfiI	GAWTC	3 cut(s)	853, 1045, 2009
Tru1I	TTAA	8 cut(s)	312, 357, 486, 695, 1310, 1725, 1871, 1896
Tru9I	TTAA	8 cut(s)	312, 357, 486, 695, 1310, 1725, 1871, 1896
TscAI	CASTG	2 cut(s)	1024, 1600
TseFI	GTSAC	1 cut(s)	1769
TseI	GCWGC	2 cut(s)	181, 1279
Tsp45I	GTSAC	1 cut(s)	1769
TspDTI	ATGAA	4 cut(s)	504, 931, 1566, 1626
TspRI	CASTG	2 cut(s)	1024, 1600
Tth111I	GACNNNGTC	1 cut(s)	1246
Van91I	CCANNNNNTGG	2 cut(s)	978, 1313
VpaK11BI	GGWCC	2 cut(s)	253, 292
VspI	ATTAAT	2 cut(s)	1310, 1871
XagI	CCTNNNNNAGG	1 cut(s)	1146
XapI	RAATTY	1 cut(s)	1602
XhoI	CTCGAG	1 cut(s)	1733
XmiI	GTMKAC	1 cut(s)	372
XmnI	GAANNNNTTC	1 cut(s)	495
XspI	CTAG	9 cut(s)	239, 267, 368, 1071, 1188, 1383, 1476, 1983, 2050
Zsp2I	ATGCAT	1 cut(s)	1801

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.