Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0003545

Physical Location & Seq

Genomic Coordinates Forward (+)

63352972 .. 63357017

Gene Structure 4046 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG407000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGATGGCGGATCCGACTGTGATAAGTTTGAGGCCCGGCGGCGCTATTGGCCTGCGCGCCCCACGATTCCTCACACCTACTTCAGAGCCTCAATCCTCCTATGCTGCTCTCTCTTCCGCCTTCAAGACTGGTGACTTGCGGTTTGAAGGTCGTGAGCGTGTTCGATATACTAGAGATCAGCTAATGCAGCTTAGAGAGGCTGCCACTACTATCCCCGAGGCTATTTTGAAGATTAAACAAGAAATAGAGGCCGAGTTTGGTGGAGATGATCCTACTTGGGGACGCACAGATGCCAACCCACAGCCTCAATCGCAAGGTCGTTATACCGAGTTAGATAACCGTGATTGGCGTGGTCGATCTGGACAGTTACCTGCTTCTGAAGAGGAAAGAAATGATTTTTCAAGGCGACAGGGATTGAATAACCAGCAGGACCAACAATTTCCAAGGCCACAAATTTCTGGTAACCAAGTGGCAGGACCTGCTCCTGTTCTTCTTAAGGCGGAGGTTCCATGGTCAGCTCGAAGAGCAAATCTCTCTGACAAGGACCGTGTATTGAAGACAGTGAAGGGTATACTGAACAAATTGACCCCAGAGAAGTTTGATGTTCTCAAGGGTCAACTAATTGACTCTGGAATCACAAATCCAGATATTTTGAAGGATGTTATCTTTCTGATATTTGATAAGGCTGTGCTGGAGCCAACATTTTGTCCGATGTATGCCCTTTTATGTGCGGATCTTAATGCGAAACTTCCTCCTTTTCCACCTGAGGAGCCTGGTGGGAAAGAAATCACTTTTAAACGAGTCCTGTTGAATAACTGCCAGGAGGCTTTTGAAGGTGCTGACAACCTGAGGGCAGAAATTAGGCAGATGACTGCTCCTGAGCAAGAAATGGAATGCAGAGATAAAGAACGAATGCTTAAGTTGCGAACTCTAGGAAACATACGCCTTATTGGGGAACTTTTAAAGCAGAAGATGGTGCCTGAAAAGATTGTACACCATATTGTTCAGGAGCTTCTGGGATATGATGGAAAAACATGCCCTGCTGAAGAGAATGTAGAGGCAATATGTCAGTTTTTCAACACCATTGGTAAGCAGCTTGATGAGAGCCAAAAATCTCGCCGAATCAACGATACCTATTTCAGTAGGTTGAAGGAACTGACTACAAACTCCCAACTTGCACCACGGTTGAGGTTCATGGTCCGCAATGTTCTTGATATGCGGGCCAACAACTGGATTCCAAGACGGGAAGAGGTGAAAGCAAAGACTATAACTGAAATTCATTCAGAAGCAGAAAAGAACTTAGGGTTGCGTCCAGGTGCAACGGCAACGATAAGGAATGCTCGCATTGCAGCTGCCTCTGGGGATTCGAGCCCCGGAGGTCTTCCTGCTACCCGGCCTGGCTATATGCCTGGAATGCCTGGGAGCAGGAAAATGCCGGGAATGCCTGGACTTGATTCTGACAATTGGGAGGTTTATCGATCTAGATCAATGACCAAGCGCGATGGTTTGGTTAACTCTCCATCTGGAGGACGTGTCCAGCCACCGTTGATCAGCAAAGCACCGTCTCTTAATTCAAAATTTTTACCTCAAGGCAGTGGTGGAATCATAACTGGGAAAACAAGTGCCTTGTTGCAGGGCTCTGGTGGTCCTCCTCGAACTAATTTGATTTCTGGAGTTGAACCTCTTACTCAAAACGCCAAGCCTACAGTTCCAGCTGCATCATCAGTTTCTTCTGAGAAGGCTCTGGCCCCTGAAATTGTACCGACTTCTGCTAAACCTCTGATTCCAGCAACAGTACCAAATTCTGCTGCTCTTCTTAAAAAATCTGTGTCCCTGCTGGAAGAATATTTCAGTGTTCGGATTCTCGACGAGGCACTTCAATGTGTGGAGGAGCTGAAAGCCCCAGCCTACCATCCGGAGTTTGTTAAAGAAGCTATTGCTCTTGCTCTGGATAAGAGCCCACCATGTGTAGAACCGGTCATAAAACTTCTCGAGTACCTGTTCAGTAAAAACGTTTTGACATCGAGAGATATAGGGACTGGTTGCCTTTTATATGGGTCAATGTTGGACGAAATCGGCATTGATTTGCCGAAAGCACCAAATAATTTTGGTGAGATTATTGGGAAGTTGGCTCTGGCAGGGGCATTGGACTTCAAGGTTGTGAAGGAAATCCTTAAGAAGGTGGAAGATGACATGTATCGGTCGGCCATTTTTGGTGCTGCTATGAAGAGCATTACAGCATCGCAAGATTTTTTGGCTAGCCAGGAAACTGAAATTCAGGCGTGTAAAAGTTTGCTTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03013 ko05416 map03013 map05416

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

767

Amino Acids

84.31

Weight (kDa)

8.58

Isoelectric Point (pI)

53.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIF4G	PF02854	185 - 410	4.4e-54	MIF4G domain
MA3	PF02847	607 - 717	3.4e-25	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003545)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57870 AT5G57870
fragaria_vesca	FvH4_1g00720 FvH4_1g00720 FvH4_2g41200
malus_domestica	MD02G1005900.v1.1 MD02G1006000.v1.1 MD08G1055400.v1.1 MD15G1150600.v1.1
prunus_persica	Prupe.1G395100_v2.0.a1 Prupe.7G265100_v2.0.a1
pyrus_communis	pycom02g00490 pycom08g04550 pycom14g07580 pycom15g13480
rosa_chinensis	RchiOBHm_Chr2g0085441 RchiOBHm_Chr6g0299311
rosa_laevigata	RLG00000011443 RLG00000015688
rosa_multiflora	Rmu_sc0007908.1_g000012 Rmu_ssc0000374.1_g000005
rosa_roxburghii	Rroxscaffold_2G00155380 Rroxscaffold_7G00168790
rosa_rugosa	Rorug01G0460400 Rorug06G0287100
rosa_samantha	Rh2AG008600 Rh2BG009900 Rh2CG010400 Rh2DG010800 Rh6AG398600 Rh6BG407000 Rh6CG413000 Rh6DG399800
rosa_wichuraiana	Rw2G000830 Rw6G034890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	379, 487
AccB1I	GGYRCC	1 cut(s)	976
AccB7I	CCANNNNNTGG	1 cut(s)	1230
AccI	GTMKAC	1 cut(s)	571
AccII	CGCG	2 cut(s)	57, 1500
AccIII	TCCGGA	1 cut(s)	1915
AciI	CCGC	8 cut(s)	8, 39, 117, 139, 500, 731, 1201, 1219
AclI	AACGTT	1 cut(s)	2013
AclWI	GGATC	4 cut(s)	5, 18, 263, 741
AcoI	YGGCCR	1 cut(s)	2205
AcsI	RAATTY	5 cut(s)	453, 1275, 1577, 1801, 2274
AcuI	CTGAAG	3 cut(s)	66, 399, 1065
AdeI	CACNNNGTG	1 cut(s)	1967
AfaI	GTAC	4 cut(s)	993, 1761, 1797, 1997
AfiI	CCNNNNNNNGG	5 cut(s)	278, 952, 1230, 1526, 2179
AflII	CTTAAG	3 cut(s)	494, 917, 2174
AflIII	ACRYGT	2 cut(s)	1531, 2193
AgeI	ACCGGT	1 cut(s)	1975
AjiI	CACGTC	1 cut(s)	1532
AjnI	CCWGG	8 cut(s)	772, 819, 1312, 1396, 1408, 1417, 1444, 2262
AluBI	AGCT	9 cut(s)	181, 190, 518, 1012, 1096, 1352, 1715, 1894, 1934
AluI	AGCT	9 cut(s)	181, 190, 518, 1012, 1096, 1352, 1715, 1894, 1934
Alw26I	GTCTC	1 cut(s)	1569
AlwI	GGATC	4 cut(s)	5, 18, 263, 741
AlwNI	CAGNNNCTG	1 cut(s)	479
Ama87I	CYCGRG	2 cut(s)	215, 1991
Aor13HI	TCCGGA	1 cut(s)	1915
AoxI	GGCC	8 cut(s)	32, 49, 249, 446, 1221, 1394, 1746, 2205
ApeKI	GCWGC	9 cut(s)	104, 187, 200, 1093, 1349, 1352, 1715, 1808, 2219
ApoI	RAATTY	5 cut(s)	453, 1275, 1577, 1801, 2274
ArsI	GACNNNNNNTTYG	2 cut(s)	125, 157
AsiGI	ACCGGT	1 cut(s)	1975
AspLEI	GCGC	4 cut(s)	44, 57, 59, 1500
AspS9I	GGNCC	8 cut(s)	33, 430, 476, 544, 1198, 1221, 1646, 1747
AsuC2I	CCSGG	4 cut(s)	36, 1374, 1393, 1437
AsuHPI	GGTGA	3 cut(s)	143, 1264, 2123
AsuNHI	GCTAGC	1 cut(s)	2258
AvaI	CYCGRG	2 cut(s)	215, 1991
AvaII	GGWCC	5 cut(s)	430, 476, 544, 1198, 1646
AxyI	CCTNAGG	2 cut(s)	765, 848
BamHI	GGATCC	1 cut(s)	10
BanI	GGYRCC	1 cut(s)	976
BanII	GRGCYC	3 cut(s)	1373, 1640, 1961
BbsI	GAAGAC	2 cut(s)	563, 1373
BbvI	GCAGC	9 cut(s)	91, 187, 199, 1105, 1339, 1361, 1702, 1795, 2206
BccI	CCATC	5 cut(s)	967, 1019, 1496, 1528, 1920
BceAI	ACGGC	1 cut(s)	1338
BciT130I	CCWGG	8 cut(s)	774, 821, 1314, 1398, 1410, 1419, 1446, 2264
BclI	TGATCA	1 cut(s)	1548
BcnI	CCSGG	4 cut(s)	36, 1374, 1393, 1437
BcoDI	GTCTC	1 cut(s)	1569
BfaI	CTAG	4 cut(s)	171, 932, 1482, 2259
BfmI	CTRYAG	1 cut(s)	1704
BfoI	RGCGCY	1 cut(s)	45
BfrI	CTTAAG	3 cut(s)	494, 917, 2174
BfuAI	ACCTGC	2 cut(s)	379, 487
Bme18I	GGWCC	5 cut(s)	430, 476, 544, 1198, 1646
BmeT110I	CYCGRG	2 cut(s)	215, 1991
BmgBI	CACGTC	1 cut(s)	1532
BmgT120I	GGNCC	8 cut(s)	33, 430, 476, 544, 1198, 1221, 1646, 1747
BmiI	GGNNCC	6 cut(s)	12, 507, 696, 771, 978, 1749
BmrI	ACTGGG	1 cut(s)	1620
BmsI	GCATC	3 cut(s)	280, 1727, 2249
BmtI	GCTAGC	1 cut(s)	2262
BmuI	ACTGGG	1 cut(s)	1620
BpiI	GAAGAC	2 cut(s)	563, 1373
BplI	GAGNNNNNCTC	2 cut(s)	516, 548
BpmI	CTGGAG	3 cut(s)	713, 1545, 1692
Bpu10I	CCTNAGC	1 cut(s)	879
BpuEI	CTTGAG	2 cut(s)	593, 1572
BpuMI	CCSGG	4 cut(s)	36, 1374, 1393, 1437
Bsa29I	ATCGAT	1 cut(s)	1477
BsaBI	GATNNNNATC	1 cut(s)	1483
BsaJI	CCNNGG	6 cut(s)	216, 443, 509, 1181, 1372, 1418
BsaWI	WCCGGW	2 cut(s)	1915, 1975
BsaXI	ACNNNNNCTCC	2 cut(s)	1518, 1548
Bsc4I	CCNNNNNNNGG	5 cut(s)	278, 952, 1230, 1526, 2179
Bse118I	RCCGGY	1 cut(s)	1975
Bse1I	ACTGG	4 cut(s)	133, 1235, 1615, 2044
Bse21I	CCTNAGG	2 cut(s)	765, 848
Bse3DI	GCAATG	2 cut(s)	1210, 1344
Bse8I	GATNNNNATC	1 cut(s)	1483
BseAI	TCCGGA	1 cut(s)	1915
BseBI	CCWGG	8 cut(s)	774, 821, 1314, 1398, 1410, 1419, 1446, 2264
BseCI	ATCGAT	1 cut(s)	1477
BseDI	CCNNGG	6 cut(s)	216, 443, 509, 1181, 1372, 1418
BseGI	GGATG	2 cut(s)	664, 1912
BseJI	GATNNNNATC	1 cut(s)	1483
BseLI	CCNNNNNNNGG	5 cut(s)	278, 952, 1230, 1526, 2179
BseMI	GCAATG	2 cut(s)	1210, 1344
BseMII	CTCAG	4 cut(s)	756, 839, 870, 1725
BseNI	ACTGG	4 cut(s)	133, 1235, 1615, 2044
BsePI	GCGCGC	1 cut(s)	55
BseRI	GAGGAG	3 cut(s)	782, 1641, 1904
BseXI	GCAGC	9 cut(s)	91, 187, 199, 1105, 1339, 1361, 1702, 1795, 2206
BseYI	CCCAGC	1 cut(s)	1903
Bsh1236I	CGCG	2 cut(s)	57, 1500
Bsh1285I	CGRYCG	1 cut(s)	2204
BshFI	GGCC	8 cut(s)	34, 51, 251, 448, 1223, 1396, 1748, 2207
BshNI	GGYRCC	1 cut(s)	976
BshTI	ACCGGT	1 cut(s)	1975
BshVI	ATCGAT	1 cut(s)	1477
BsiEI	CGRYCG	1 cut(s)	2204
BsiHKCI	CYCGRG	2 cut(s)	215, 1991
BsiSI	CCGG	6 cut(s)	36, 1374, 1393, 1436, 1916, 1976
BslFI	GGGAC	3 cut(s)	294, 1816, 2050
BslI	CCNNNNNNNGG	5 cut(s)	278, 952, 1230, 1526, 2179
BsmAI	GTCTC	1 cut(s)	1569
BsmBI	CGTCTC	1 cut(s)	1569
BsmFI	GGGAC	3 cut(s)	294, 1816, 2050
BsmI	GAATGC	5 cut(s)	899, 918, 1342, 1419, 1446
BsnI	GGCC	8 cut(s)	34, 51, 251, 448, 1223, 1396, 1748, 2207
BsoBI	CYCGRG	2 cut(s)	215, 1991
Bsp1286I	GDGCHC	3 cut(s)	1373, 1640, 1961
Bsp13I	TCCGGA	1 cut(s)	1915
Bsp1407I	TGTACA	1 cut(s)	991
Bsp143I	GATC	8 cut(s)	10, 175, 268, 356, 733, 1478, 1484, 1548
Bsp19I	CCATGG	1 cut(s)	509
BspACI	CCGC	8 cut(s)	8, 39, 117, 139, 500, 731, 1201, 1219
BspANI	GGCC	8 cut(s)	34, 51, 251, 448, 1223, 1396, 1748, 2207
BspCNI	CTCAG	4 cut(s)	757, 840, 871, 1726
BspDI	ATCGAT	1 cut(s)	1477
BspEI	TCCGGA	1 cut(s)	1915
BspFNI	CGCG	2 cut(s)	57, 1500
BspLI	GGNNCC	6 cut(s)	12, 507, 696, 771, 978, 1749
BspMI	ACCTGC	2 cut(s)	379, 487
BspOI	GCTAGC	1 cut(s)	2262
BspPI	GGATC	4 cut(s)	5, 18, 263, 741
BspQI	GCTCTTC	3 cut(s)	517, 1818, 2222
BspT107I	GGYRCC	1 cut(s)	976
BspTI	CTTAAG	3 cut(s)	494, 917, 2174
BsrDI	GCAATG	2 cut(s)	1210, 1344
BsrFI	RCCGGY	1 cut(s)	1975
BsrGI	TGTACA	1 cut(s)	991
BsrI	ACTGG	4 cut(s)	133, 1235, 1615, 2044
BssAI	RCCGGY	1 cut(s)	1975
BssECI	CCNNGG	6 cut(s)	216, 443, 509, 1181, 1372, 1418
BssHII	GCGCGC	1 cut(s)	55
BssMI	GATC	8 cut(s)	10, 175, 268, 356, 733, 1478, 1484, 1548
BssNAI	GTATAC	1 cut(s)	572
BssT1I	CCWWGG	2 cut(s)	443, 509
Bst1107I	GTATAC	1 cut(s)	572
Bst2UI	CCWGG	8 cut(s)	774, 821, 1314, 1398, 1410, 1419, 1446, 2264
Bst6I	CTCTTC	7 cut(s)	118, 375, 517, 1041, 1242, 1818, 2222
BstAFI	CTTAAG	3 cut(s)	494, 917, 2174
BstAPI	GCANNNNNTGC	1 cut(s)	479
BstAUI	TGTACA	1 cut(s)	991
BstC8I	GCNNGC	5 cut(s)	53, 57, 1221, 1342, 2260
BstDEI	CTNAG	6 cut(s)	191, 765, 848, 879, 1300, 1734
BstDSI	CCRYGG	2 cut(s)	509, 1181
BstEII	GGTNACC	1 cut(s)	461
BstENI	CCTNNNNNAGG	1 cut(s)	2177
BstF5I	GGATG	2 cut(s)	664, 1912
BstFNI	CGCG	2 cut(s)	57, 1500
BstH2I	RGCGCY	1 cut(s)	45
BstHHI	GCGC	4 cut(s)	44, 57, 59, 1500
BstKTI	GATC	8 cut(s)	13, 178, 271, 359, 736, 1481, 1487, 1551
BstMAI	GTCTC	1 cut(s)	1569
BstMBI	GATC	8 cut(s)	10, 175, 268, 356, 733, 1478, 1484, 1548
BstMCI	CGRYCG	1 cut(s)	2204
BstMWI	GCNNNNNNNGC	9 cut(s)	48, 187, 310, 479, 524, 922, 1346, 1414, 1441
BstNI	CCWGG	8 cut(s)	774, 821, 1314, 1398, 1410, 1419, 1446, 2264
BstNSI	RCATGY	2 cut(s)	1038, 2197
BstPI	GGTNACC	1 cut(s)	461
BstSFI	CTRYAG	1 cut(s)	1704
BstUI	CGCG	2 cut(s)	57, 1500
BstV1I	GCAGC	9 cut(s)	91, 187, 199, 1105, 1339, 1361, 1702, 1795, 2206
BstV2I	GAAGAC	2 cut(s)	563, 1373
BstX2I	RGATCY	2 cut(s)	10, 733
BstYI	RGATCY	2 cut(s)	10, 733
BstZ17I	GTATAC	1 cut(s)	572
Bsu15I	ATCGAT	1 cut(s)	1477
Bsu36I	CCTNAGG	2 cut(s)	765, 848
BsuRI	GGCC	8 cut(s)	34, 51, 251, 448, 1223, 1396, 1748, 2207
BsuTUI	ATCGAT	1 cut(s)	1477
BtgI	CCRYGG	2 cut(s)	509, 1181
BtgZI	GCGATG	2 cut(s)	1515, 2226
BtrI	CACGTC	1 cut(s)	1532
BtsCI	GGATG	2 cut(s)	664, 1912
BtsI	GCAGTG	1 cut(s)	1600
BtsIMutI	CAGTG	3 cut(s)	567, 1600, 1858
BveI	ACCTGC	2 cut(s)	379, 487
Cac8I	GCNNGC	5 cut(s)	53, 57, 1221, 1342, 2260
CaiI	CAGNNNCTG	1 cut(s)	479
CfoI	GCGC	4 cut(s)	44, 57, 59, 1500
Cfr10I	RCCGGY	1 cut(s)	1975
Cfr13I	GGNCC	8 cut(s)	33, 430, 476, 544, 1198, 1221, 1646, 1747
ClaI	ATCGAT	1 cut(s)	1477
CseI	GACGC	2 cut(s)	291, 1298
Csp6I	GTAC	4 cut(s)	992, 1760, 1796, 1996
CspAI	ACCGGT	1 cut(s)	1975
CviAII	CATG	5 cut(s)	510, 1035, 1195, 1965, 2194
CviQI	GTAC	4 cut(s)	992, 1760, 1796, 1996
DdeI	CTNAG	6 cut(s)	191, 765, 848, 879, 1300, 1734
DpnI	GATC	8 cut(s)	12, 177, 270, 358, 735, 1480, 1486, 1550
DpnII	GATC	8 cut(s)	10, 175, 268, 356, 733, 1478, 1484, 1548
DraI	TTTAAA	2 cut(s)	796, 963
DraIII	CACNNNGTG	1 cut(s)	1967
EaeI	YGGCCR	1 cut(s)	2205
Eam1104I	CTCTTC	7 cut(s)	118, 375, 517, 1041, 1242, 1818, 2222
EarI	CTCTTC	7 cut(s)	118, 375, 517, 1041, 1242, 1818, 2222
EciI	GGCGGA	3 cut(s)	23, 106, 515
Eco130I	CCWWGG	2 cut(s)	443, 509
Eco24I	GRGCYC	3 cut(s)	1373, 1640, 1961
Eco47I	GGWCC	5 cut(s)	430, 476, 544, 1198, 1646
Eco57I	CTGAAG	3 cut(s)	66, 399, 1065
Eco81I	CCTNAGG	2 cut(s)	765, 848
Eco88I	CYCGRG	2 cut(s)	215, 1991
Eco91I	GGTNACC	1 cut(s)	461
EcoNI	CCTNNNNNAGG	1 cut(s)	2177
EcoO109I	RGGNCCY	1 cut(s)	476
EcoO65I	GGTNACC	1 cut(s)	461
EcoRII	CCWGG	8 cut(s)	772, 819, 1312, 1396, 1408, 1417, 1444, 2262
EcoT14I	CCWWGG	2 cut(s)	443, 509
EcoT38I	GRGCYC	3 cut(s)	1373, 1640, 1961
ErhI	CCWWGG	2 cut(s)	443, 509
Esp3I	CGTCTC	1 cut(s)	1569
FaeI	CATG	5 cut(s)	513, 1038, 1198, 1968, 2197
FaqI	GGGAC	3 cut(s)	294, 1816, 2050
FatI	CATG	5 cut(s)	509, 1034, 1194, 1964, 2193
FauI	CCCGC	1 cut(s)	1212
FbaI	TGATCA	1 cut(s)	1548
FblI	GTMKAC	1 cut(s)	571
FokI	GGATG	2 cut(s)	671, 1899
FriOI	GRGCYC	3 cut(s)	1373, 1640, 1961
FspBI	CTAG	4 cut(s)	171, 932, 1482, 2259
GlaI	GCGC	4 cut(s)	43, 56, 58, 1499
GsaI	CCCAGC	1 cut(s)	1907
GsuI	CTGGAG	3 cut(s)	713, 1545, 1692
HaeII	RGCGCY	1 cut(s)	45
HaeIII	GGCC	8 cut(s)	34, 51, 251, 448, 1223, 1396, 1748, 2207
HapII	CCGG	6 cut(s)	36, 1374, 1393, 1436, 1916, 1976
HgaI	GACGC	2 cut(s)	291, 1298
HhaI	GCGC	4 cut(s)	44, 57, 59, 1500
Hin1II	CATG	5 cut(s)	513, 1038, 1198, 1968, 2197
Hin6I	GCGC	4 cut(s)	42, 55, 57, 1498
HinP1I	GCGC	4 cut(s)	42, 55, 57, 1498
HincII	GTYRAC	2 cut(s)	617, 1513
HindII	GTYRAC	2 cut(s)	617, 1513
HpaI	GTTAAC	1 cut(s)	1513
HpaII	CCGG	6 cut(s)	36, 1374, 1393, 1436, 1916, 1976
HphI	GGTGA	3 cut(s)	143, 1264, 2123
Hpy166II	GTNNAC	4 cut(s)	572, 617, 994, 1513
Hpy8I	GTNNAC	4 cut(s)	572, 617, 994, 1513
Hpy99I	CGWCG	1 cut(s)	1871
HpyAV	CCTTC	9 cut(s)	130, 140, 559, 649, 827, 1144, 1732, 2158, 2173
HpyCH4IV	ACGT	2 cut(s)	1531, 2013
HpyCH4V	TGCA	7 cut(s)	187, 897, 1178, 1319, 1349, 1633, 1718
HpyF10VI	GCNNNNNNNGC	9 cut(s)	48, 187, 310, 479, 524, 922, 1346, 1414, 1441
HpyF3I	CTNAG	6 cut(s)	191, 765, 848, 879, 1300, 1734
HpySE526I	ACGT	2 cut(s)	1531, 2013
Hsp92II	CATG	5 cut(s)	513, 1038, 1198, 1968, 2197
HspAI	GCGC	4 cut(s)	42, 55, 57, 1498
Kpn2I	TCCGGA	1 cut(s)	1915
Ksp22I	TGATCA	1 cut(s)	1548
KspAI	GTTAAC	1 cut(s)	1513
Kzo9I	GATC	8 cut(s)	10, 175, 268, 356, 733, 1478, 1484, 1548
LguI	GCTCTTC	3 cut(s)	517, 1818, 2222
LmnI	GCTCC	7 cut(s)	487, 694, 769, 880, 1009, 1422, 1891
Lsp1109I	GCAGC	9 cut(s)	91, 187, 199, 1105, 1339, 1361, 1702, 1795, 2206
LweI	GCATC	3 cut(s)	280, 1727, 2249
MaeI	CTAG	4 cut(s)	171, 932, 1482, 2259
MaeII	ACGT	2 cut(s)	1531, 2013
MaeIII	GTNAC	3 cut(s)	131, 366, 461
MalI	GATC	8 cut(s)	12, 177, 270, 358, 735, 1480, 1486, 1550
MboI	GATC	8 cut(s)	10, 175, 268, 356, 733, 1478, 1484, 1548
MfeI	CAATTG	1 cut(s)	1462
MflI	RGATCY	2 cut(s)	10, 733
MhlI	GDGCHC	3 cut(s)	1373, 1640, 1961
MlyI	GAGTC	2 cut(s)	620, 810
MmeI	TCCRAC	2 cut(s)	38, 2046
MroI	TCCGGA	1 cut(s)	1915
MslI	CAYNNNNRTG	1 cut(s)	1879
MspA1I	CMGCKG	2 cut(s)	1352, 1715
MspCI	CTTAAG	3 cut(s)	494, 917, 2174
MspI	CCGG	6 cut(s)	36, 1374, 1393, 1436, 1916, 1976
MunI	CAATTG	1 cut(s)	1462
Mva1269I	GAATGC	5 cut(s)	899, 918, 1342, 1419, 1446
MvaI	CCWGG	8 cut(s)	774, 821, 1314, 1398, 1410, 1419, 1446, 2264
MvnI	CGCG	2 cut(s)	57, 1500
MwoI	GCNNNNNNNGC	9 cut(s)	48, 187, 310, 479, 524, 922, 1346, 1414, 1441
NciI	CCSGG	4 cut(s)	36, 1374, 1393, 1437
NcoI	CCATGG	1 cut(s)	509
NdeII	GATC	8 cut(s)	10, 175, 268, 356, 733, 1478, 1484, 1548
NheI	GCTAGC	1 cut(s)	2258
NlaIII	CATG	5 cut(s)	513, 1038, 1198, 1968, 2197
NlaIV	GGNNCC	6 cut(s)	12, 507, 696, 771, 978, 1749
NmeAIII	GCCGAG	1 cut(s)	277
NmuCI	GTSAC	1 cut(s)	131
NspI	RCATGY	2 cut(s)	1038, 2197
PaeR7I	CTCGAG	1 cut(s)	1991
PauI	GCGCGC	1 cut(s)	55
PciI	ACATGT	1 cut(s)	2193
PciSI	GCTCTTC	3 cut(s)	517, 1818, 2222
PctI	GAATGC	5 cut(s)	899, 918, 1342, 1419, 1446
PfeI	GAWTC	9 cut(s)	66, 633, 1122, 1234, 1364, 1454, 1602, 1783, 1861
PflMI	CCANNNNNTGG	1 cut(s)	1230
PinAI	ACCGGT	1 cut(s)	1975
PleI	GAGTC	2 cut(s)	620, 809
PpsI	GAGTC	2 cut(s)	620, 809
PpuMI	RGGWCCY	1 cut(s)	476
PscI	ACATGT	1 cut(s)	2193
Psp1406I	AACGTT	1 cut(s)	2013
Psp5II	RGGWCCY	1 cut(s)	476
Psp6I	CCWGG	8 cut(s)	772, 819, 1312, 1396, 1408, 1417, 1444, 2262
PspEI	GGTNACC	1 cut(s)	461
PspFI	CCCAGC	1 cut(s)	1903
PspGI	CCWGG	8 cut(s)	772, 819, 1312, 1396, 1408, 1417, 1444, 2262
PspN4I	GGNNCC	6 cut(s)	12, 507, 696, 771, 978, 1749
PspPI	GGNCC	8 cut(s)	33, 430, 476, 544, 1198, 1221, 1646, 1747
PspPPI	RGGWCCY	1 cut(s)	476
PstNI	CAGNNNCTG	1 cut(s)	479
PsuI	RGATCY	2 cut(s)	10, 733
PteI	GCGCGC	1 cut(s)	55
PvuII	CAGCTG	2 cut(s)	1352, 1715
RsaI	GTAC	4 cut(s)	993, 1761, 1797, 1997
RsaNI	GTAC	4 cut(s)	992, 1760, 1796, 1996
RseI	CAYNNNNRTG	1 cut(s)	1879
SapI	GCTCTTC	3 cut(s)	517, 1818, 2222
Sau3AI	GATC	8 cut(s)	10, 175, 268, 356, 733, 1478, 1484, 1548
Sau96I	GGNCC	8 cut(s)	33, 430, 476, 544, 1198, 1221, 1646, 1747
SchI	GAGTC	2 cut(s)	620, 810
SduI	GDGCHC	3 cut(s)	1373, 1640, 1961
SfaNI	GCATC	3 cut(s)	280, 1727, 2249
SfcI	CTRYAG	1 cut(s)	1704
Sfr274I	CTCGAG	1 cut(s)	1991
SinI	GGWCC	5 cut(s)	430, 476, 544, 1198, 1646
SlaI	CTCGAG	1 cut(s)	1991
SmiMI	CAYNNNNRTG	1 cut(s)	1879
SmlI	CTYRAG	6 cut(s)	494, 608, 917, 1587, 1991, 2174
SmoI	CTYRAG	6 cut(s)	494, 608, 917, 1587, 1991, 2174
SsiI	CCGC	8 cut(s)	8, 39, 117, 139, 500, 731, 1201, 1219
SspI	AATATT	1 cut(s)	1847
SspMI	CTAG	4 cut(s)	171, 932, 1482, 2259
StyI	CCWWGG	2 cut(s)	443, 509
TaiI	ACGT	2 cut(s)	1534, 2016
TaqI	TCGA	9 cut(s)	163, 355, 520, 1367, 1477, 1654, 1866, 1992, 2024
TaqII	GACCGA	1 cut(s)	2190
TatI	WGTACW	1 cut(s)	991
TauI	GCSGC	1 cut(s)	42
TfiI	GAWTC	9 cut(s)	66, 633, 1122, 1234, 1364, 1454, 1602, 1783, 1861
TscAI	CASTG	3 cut(s)	567, 1600, 1858
TseFI	GTSAC	1 cut(s)	131
TseI	GCWGC	9 cut(s)	104, 187, 200, 1093, 1349, 1352, 1715, 1808, 2219
Tsp45I	GTSAC	1 cut(s)	131
TspDTI	ATGAA	3 cut(s)	1183, 1268, 2240
TspRI	CASTG	3 cut(s)	567, 1600, 1858
Van91I	CCANNNNNTGG	1 cut(s)	1230
Vha464I	CTTAAG	3 cut(s)	494, 917, 2174
VpaK11BI	GGWCC	5 cut(s)	430, 476, 544, 1198, 1646
XagI	CCTNNNNNAGG	1 cut(s)	2177
XapI	RAATTY	5 cut(s)	453, 1275, 1577, 1801, 2274
XbaI	TCTAGA	1 cut(s)	1481
XceI	RCATGY	2 cut(s)	1038, 2197
XhoI	CTCGAG	1 cut(s)	1991
XmiI	GTMKAC	1 cut(s)	571
XspI	CTAG	4 cut(s)	171, 932, 1482, 2259

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.