Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0003545

Physical Location & Seq

Genomic Coordinates Forward (+)

59480389 .. 59484428

Gene Structure 4040 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G034890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

ATGATGGCGGATCCGACTGTGATAAGTTTGAGGCCCGGCGGCGCTATTGGCCTGCGCGCCCCACGATTCCTCACACCTCGCCTCGATTCCTCTTCAGAGCCTCAATCCTCCAATGCTGCTCTCTCTTCCGCCTTCAAGACTGGTGACTTGCGGTTTGAAGGTCGTGAGCGTGTTCGATATACTAGAGATCAGCTAATGCAGCTTAGAGAGGCTGCCAATACTATCCCCGAGGGTATTTTGAAGATTAAACAAGAAATAGAGGCCGAGTTTGGTGGAGATGATCCTACTTGGGGACGCACAGATGCCAACCCACAGCCTCAACCTCAGCCTCAATTGCAAGGTCGTTATACCGAGTTAGATAACCGTGATTGGCGTGGTCGATCTGGACAGTTACCTGCTTCTGAAGAGGAAAGAAATGATTTTTCAAGGCGACAGGGATTGAATAACCAGCAGGACCAACAATTTGCAAGGCCACAAATTTCTGGTAACCAAGTGGCAGGACCTGCTCCTGTTCTTCTTAAGGCAGAGGTTCCATGGTCAGCTCGAAGAGCAAATCTCTCTGAGAAGGACCGTGTATTGAAGACAGTGAAAGGTATACTGAACAAATTGACCCCAGAGAAGTTTGATGTTCTCAAGGGTCAACTAATTGACTCTGGAATCACAAATCCAGATATTTTGAAGGATGTTATCTTTCTGATATTTGATAAGGCTGTGCTGGAGCCAACATTTTGTCCGATGTATGCCCTTTTATGTGCGGATCTTAATGCGAAACTTCCTCCTTTTCCACCTGAGGAGCCTGGTGGGAAAGAAATCACTTTTAAACGAGTCCTGTTGAATAACTGCCAGGAGGCTTTCGAAGGTGCTGACAACCTGAGGGCAGAAATTAGGCAGATGACTGCTCCTGAGCAGGAAATGGAATGCAGAGATAAAGAACGAATGCTTAAGTTGCGAACTCTAGGAAACATACGCCTTATTGGGGAACTTTTAAAGCAGAAGATGGTGCCTGAAAAGATTGTACACCATATTGTTCAGGAGCTTCTGGGATATGATGGAAAAACATGCCCTGCTGAAGAGAATGTAGAGGCAATATGTCAGTTTTTCAACACCATTGGTAAGCAGCTTGATGAGAGCCAAAAATCTCGCCGAATCAACGATACCTATTTCAGTAGGTTGAAGGAACTGACTACAAACTCCCAACTTGCACCACGGTTGAGGTTCATGGTCCGCAATGTTCTTGATATGCGGGCCAACAACTGGATTCCAAGACGGGAAGAGGTGAAAGCAAAGACTATAACTGAAATTCATTCAGAAGCAGAAAAGAACTTAGGGTTGCGTCCAGGTGCAACGGCAACGATAAGGAATGCTCGTATTGCGGCTGCCTCTGGGGATTTGAGCCCCGGAGGTCTTCCTGCTACCCGGCCTGGCTATATGCCTGGAATGCCTGGGAGCAGGAAAATGCCGGGAATGCCTGGACTTGATTCTGACAATTGGGAGGTTTATCGATCTAGATCAATGACCAAGCGCGATGGTTTGGTTAACTCTCCATCTGGAGGACGTGTCCAGCCACCGTTGATCAGCAAAGCACCGTCTCTTAATTCAAAATTTTTACCTCAAGGCAGTGGTGGAATCATAACTGGGAAAACAAGTGCCTTGTTGCAGGGCTCTGGTGGTCCTCCTCGAACTAATTTGATTTCTGGAGTTGAACCTCTTACTCAAAACGCCAAGCCTACAGTTCCAGCTGCATCATCAGTTTCTTCTGAGAAGGCTCCGGCCCCTGAAATTGTACCGACTTCTGCTAAACCTCTGATTCCTGCAACAATACCAAATTCTGCTGCTCTTCTTAAAAAAACTGTATCCCTGCTGGAAGAATATTTCAGTGTTCGGATTCTCGACGAGGCACTTCAATGTGTGGAGGAGCTGAAAGCCCCAGCCTACCATCCGGAGTTTGTTAAAGAAGCTATTGCTCTTGCTCTGGATAAGAACCCACCATGTGTAGAACCGGTCATAAAACTTCTCGAGTACCTGTTCAGTAAAAACGTCTTGACATCGAGAGATATAGGGACTGGTTGCCTTTTATATGGGTCCATGTTGGACGAAATCGGCATTGATTTGCCGAAAGCACCAAATAATTTTGGTGAGATTATTGGGAAGTTGGCTCTGGCAGGGGCATTGGACTTCAAGGTTGTGAAGGAAATCCTTAAGAAGGTGGAAGATGACATGTATCGGTCGGCCATTTTTGGTGCTGCTATGAAGAGCATTACATCGCAAGATTTTTTGGCTAGCCAGGAAACTGAAATTCAGGCGTGTAAAAGTTTGCTTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03013 ko05416 map03013 map05416

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

774

Amino Acids

85.17

Weight (kDa)

8.58

Isoelectric Point (pI)

52.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIF4G	PF02854	193 - 418	4.5e-54	MIF4G domain
MA3	PF02847	615 - 725	4.5e-25	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003545)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57870 AT5G57870
fragaria_vesca	FvH4_1g00720 FvH4_1g00720 FvH4_2g41200
malus_domestica	MD02G1005900.v1.1 MD02G1006000.v1.1 MD08G1055400.v1.1 MD15G1150600.v1.1
prunus_persica	Prupe.1G395100_v2.0.a1 Prupe.7G265100_v2.0.a1
pyrus_communis	pycom02g00490 pycom08g04550 pycom14g07580 pycom15g13480
rosa_chinensis	RchiOBHm_Chr2g0085441 RchiOBHm_Chr6g0299311
rosa_laevigata	RLG00000011443 RLG00000015688
rosa_multiflora	Rmu_sc0007908.1_g000012 Rmu_ssc0000374.1_g000005
rosa_roxburghii	Rroxscaffold_2G00155380 Rroxscaffold_7G00168790
rosa_rugosa	Rorug01G0460400 Rorug06G0287100
rosa_samantha	Rh2AG008600 Rh2BG009900 Rh2CG010400 Rh2DG010800 Rh6AG398600 Rh6BG407000 Rh6CG413000 Rh6DG399800
rosa_wichuraiana	Rw2G000830 Rw6G034890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	403, 511
AccB1I	GGYRCC	1 cut(s)	1000
AccB7I	CCANNNNNTGG	1 cut(s)	1254
AccI	GTMKAC	1 cut(s)	595
AccII	CGCG	2 cut(s)	57, 1524
AccIII	TCCGGA	1 cut(s)	1939
AciI	CCGC	8 cut(s)	8, 39, 129, 151, 755, 1225, 1243, 1373
AclWI	GGATC	4 cut(s)	5, 18, 275, 765
AcoI	YGGCCR	1 cut(s)	2229
AcsI	RAATTY	5 cut(s)	477, 1299, 1601, 1825, 2295
AcuI	CTGAAG	3 cut(s)	78, 423, 1089
AdeI	CACNNNGTG	1 cut(s)	1991
AfaI	GTAC	3 cut(s)	1017, 1785, 2021
AfiI	CCNNNNNNNGG	5 cut(s)	290, 976, 1254, 1550, 2203
AflII	CTTAAG	3 cut(s)	518, 941, 2198
AflIII	ACRYGT	2 cut(s)	1555, 2217
AgeI	ACCGGT	1 cut(s)	1999
AjiI	CACGTC	1 cut(s)	1556
AjnI	CCWGG	8 cut(s)	796, 843, 1336, 1420, 1432, 1441, 1468, 2283
AluBI	AGCT	8 cut(s)	193, 202, 542, 1036, 1120, 1739, 1918, 1958
AluI	AGCT	8 cut(s)	193, 202, 542, 1036, 1120, 1739, 1918, 1958
Alw26I	GTCTC	1 cut(s)	1593
AlwI	GGATC	4 cut(s)	5, 18, 275, 765
AlwNI	CAGNNNCTG	1 cut(s)	503
Ama87I	CYCGRG	2 cut(s)	227, 2015
Aor13HI	TCCGGA	1 cut(s)	1939
AoxI	GGCC	8 cut(s)	32, 49, 261, 470, 1245, 1418, 1770, 2229
ApeKI	GCWGC	8 cut(s)	116, 199, 212, 1117, 1376, 1739, 1832, 2243
ApoI	RAATTY	5 cut(s)	477, 1299, 1601, 1825, 2295
ArsI	GACNNNNNNTTYG	4 cut(s)	137, 169, 446, 478
AsiGI	ACCGGT	1 cut(s)	1999
AspLEI	GCGC	4 cut(s)	44, 57, 59, 1524
AspS9I	GGNCC	9 cut(s)	33, 454, 500, 568, 1222, 1245, 1670, 1771, 2082
AsuC2I	CCSGG	4 cut(s)	36, 1398, 1417, 1461
AsuHPI	GGTGA	3 cut(s)	155, 1288, 2147
AsuII	TTCGAA	1 cut(s)	855
AsuNHI	GCTAGC	1 cut(s)	2279
AvaI	CYCGRG	2 cut(s)	227, 2015
AvaII	GGWCC	6 cut(s)	454, 500, 568, 1222, 1670, 2082
AxyI	CCTNAGG	2 cut(s)	789, 872
BamHI	GGATCC	1 cut(s)	10
BanI	GGYRCC	1 cut(s)	1000
BanII	GRGCYC	2 cut(s)	1397, 1664
BbsI	GAAGAC	2 cut(s)	587, 1397
BbvCI	CCTCAGC	1 cut(s)	324
BbvI	GCAGC	8 cut(s)	103, 199, 211, 1129, 1363, 1726, 1819, 2230
BccI	CCATC	5 cut(s)	991, 1043, 1520, 1552, 1944
BceAI	ACGGC	1 cut(s)	1362
BciT130I	CCWGG	8 cut(s)	798, 845, 1338, 1422, 1434, 1443, 1470, 2285
BciVI	GTATCC	1 cut(s)	1864
BclI	TGATCA	1 cut(s)	1572
BcnI	CCSGG	4 cut(s)	36, 1398, 1417, 1461
BcoDI	GTCTC	1 cut(s)	1593
BfaI	CTAG	4 cut(s)	183, 956, 1506, 2280
BfmI	CTRYAG	1 cut(s)	1728
BfoI	RGCGCY	1 cut(s)	45
BfrI	CTTAAG	3 cut(s)	518, 941, 2198
BfuAI	ACCTGC	2 cut(s)	403, 511
BfuI	GTATCC	1 cut(s)	1864
Bme18I	GGWCC	6 cut(s)	454, 500, 568, 1222, 1670, 2082
BmeT110I	CYCGRG	2 cut(s)	227, 2015
BmgBI	CACGTC	1 cut(s)	1556
BmgT120I	GGNCC	9 cut(s)	33, 454, 500, 568, 1222, 1245, 1670, 1771, 2082
BmiI	GGNNCC	8 cut(s)	12, 531, 720, 795, 1002, 1767, 1773, 2083
BmrI	ACTGGG	1 cut(s)	1644
BmsI	GCATC	2 cut(s)	292, 1751
BmtI	GCTAGC	1 cut(s)	2283
BmuI	ACTGGG	1 cut(s)	1644
BpiI	GAAGAC	2 cut(s)	587, 1397
BplI	GAGNNNNNCTC	2 cut(s)	540, 572
BpmI	CTGGAG	3 cut(s)	737, 1569, 1716
Bpu10I	CCTNAGC	2 cut(s)	324, 903
Bpu14I	TTCGAA	1 cut(s)	855
BpuEI	CTTGAG	2 cut(s)	617, 1596
BpuMI	CCSGG	4 cut(s)	36, 1398, 1417, 1461
Bsa29I	ATCGAT	1 cut(s)	1501
BsaBI	GATNNNNATC	1 cut(s)	1507
BsaJI	CCNNGG	5 cut(s)	228, 533, 1205, 1396, 1442
BsaWI	WCCGGW	2 cut(s)	1939, 1999
BsaXI	ACNNNNNCTCC	2 cut(s)	1542, 1572
Bsc4I	CCNNNNNNNGG	5 cut(s)	290, 976, 1254, 1550, 2203
Bse118I	RCCGGY	1 cut(s)	1999
Bse1I	ACTGG	4 cut(s)	145, 1259, 1639, 2068
Bse21I	CCTNAGG	2 cut(s)	789, 872
Bse3DI	GCAATG	1 cut(s)	1234
Bse8I	GATNNNNATC	1 cut(s)	1507
BseAI	TCCGGA	1 cut(s)	1939
BseBI	CCWGG	8 cut(s)	798, 845, 1338, 1422, 1434, 1443, 1470, 2285
BseCI	ATCGAT	1 cut(s)	1501
BseDI	CCNNGG	5 cut(s)	228, 533, 1205, 1396, 1442
BseGI	GGATG	2 cut(s)	688, 1936
BseJI	GATNNNNATC	1 cut(s)	1507
BseLI	CCNNNNNNNGG	5 cut(s)	290, 976, 1254, 1550, 2203
BseMI	GCAATG	1 cut(s)	1234
BseMII	CTCAG	6 cut(s)	338, 552, 780, 863, 894, 1749
BseNI	ACTGG	4 cut(s)	145, 1259, 1639, 2068
BsePI	GCGCGC	1 cut(s)	55
BseRI	GAGGAG	3 cut(s)	806, 1665, 1928
BseXI	GCAGC	8 cut(s)	103, 199, 211, 1129, 1363, 1726, 1819, 2230
BseYI	CCCAGC	1 cut(s)	1927
Bsh1236I	CGCG	2 cut(s)	57, 1524
Bsh1285I	CGRYCG	1 cut(s)	2228
BshFI	GGCC	8 cut(s)	34, 51, 263, 472, 1247, 1420, 1772, 2231
BshNI	GGYRCC	1 cut(s)	1000
BshTI	ACCGGT	1 cut(s)	1999
BshVI	ATCGAT	1 cut(s)	1501
BsiEI	CGRYCG	1 cut(s)	2228
BsiHKCI	CYCGRG	2 cut(s)	227, 2015
BsiSI	CCGG	7 cut(s)	36, 1398, 1417, 1460, 1769, 1940, 2000
BslFI	GGGAC	2 cut(s)	306, 2074
BslI	CCNNNNNNNGG	5 cut(s)	290, 976, 1254, 1550, 2203
BsmAI	GTCTC	1 cut(s)	1593
BsmBI	CGTCTC	1 cut(s)	1593
BsmFI	GGGAC	2 cut(s)	306, 2074
BsmI	GAATGC	5 cut(s)	923, 942, 1366, 1443, 1470
BsnI	GGCC	8 cut(s)	34, 51, 263, 472, 1247, 1420, 1772, 2231
BsoBI	CYCGRG	2 cut(s)	227, 2015
Bsp119I	TTCGAA	1 cut(s)	855
Bsp1286I	GDGCHC	2 cut(s)	1397, 1664
Bsp13I	TCCGGA	1 cut(s)	1939
Bsp1407I	TGTACA	1 cut(s)	1015
Bsp143I	GATC	8 cut(s)	10, 187, 280, 380, 757, 1502, 1508, 1572
Bsp19I	CCATGG	1 cut(s)	533
BspACI	CCGC	8 cut(s)	8, 39, 129, 151, 755, 1225, 1243, 1373
BspANI	GGCC	8 cut(s)	34, 51, 263, 472, 1247, 1420, 1772, 2231
BspCNI	CTCAG	6 cut(s)	337, 553, 781, 864, 895, 1750
BspDI	ATCGAT	1 cut(s)	1501
BspEI	TCCGGA	1 cut(s)	1939
BspFNI	CGCG	2 cut(s)	57, 1524
BspLI	GGNNCC	8 cut(s)	12, 531, 720, 795, 1002, 1767, 1773, 2083
BspMI	ACCTGC	2 cut(s)	403, 511
BspOI	GCTAGC	1 cut(s)	2283
BspPI	GGATC	4 cut(s)	5, 18, 275, 765
BspQI	GCTCTTC	3 cut(s)	541, 1842, 2246
BspT104I	TTCGAA	1 cut(s)	855
BspT107I	GGYRCC	1 cut(s)	1000
BspTI	CTTAAG	3 cut(s)	518, 941, 2198
BsrDI	GCAATG	1 cut(s)	1234
BsrFI	RCCGGY	1 cut(s)	1999
BsrGI	TGTACA	1 cut(s)	1015
BsrI	ACTGG	4 cut(s)	145, 1259, 1639, 2068
BssAI	RCCGGY	1 cut(s)	1999
BssECI	CCNNGG	5 cut(s)	228, 533, 1205, 1396, 1442
BssHII	GCGCGC	1 cut(s)	55
BssMI	GATC	8 cut(s)	10, 187, 280, 380, 757, 1502, 1508, 1572
BssNAI	GTATAC	1 cut(s)	596
BssT1I	CCWWGG	1 cut(s)	533
Bst1107I	GTATAC	1 cut(s)	596
Bst2UI	CCWGG	8 cut(s)	798, 845, 1338, 1422, 1434, 1443, 1470, 2285
Bst6I	CTCTTC	8 cut(s)	97, 130, 399, 541, 1065, 1266, 1842, 2246
BstAFI	CTTAAG	3 cut(s)	518, 941, 2198
BstAPI	GCANNNNNTGC	1 cut(s)	503
BstAUI	TGTACA	1 cut(s)	1015
BstBI	TTCGAA	1 cut(s)	855
BstC8I	GCNNGC	4 cut(s)	53, 57, 1245, 2281
BstDEI	CTNAG	8 cut(s)	203, 324, 561, 789, 872, 903, 1324, 1758
BstDSI	CCRYGG	2 cut(s)	533, 1205
BstEII	GGTNACC	1 cut(s)	485
BstENI	CCTNNNNNAGG	1 cut(s)	2201
BstF5I	GGATG	2 cut(s)	688, 1936
BstFNI	CGCG	2 cut(s)	57, 1524
BstH2I	RGCGCY	1 cut(s)	45
BstHHI	GCGC	4 cut(s)	44, 57, 59, 1524
BstKTI	GATC	8 cut(s)	13, 190, 283, 383, 760, 1505, 1511, 1575
BstMAI	GTCTC	1 cut(s)	1593
BstMBI	GATC	8 cut(s)	10, 187, 280, 380, 757, 1502, 1508, 1572
BstMCI	CGRYCG	1 cut(s)	2228
BstMWI	GCNNNNNNNGC	9 cut(s)	48, 199, 334, 503, 548, 946, 1370, 1438, 1465
BstNI	CCWGG	8 cut(s)	798, 845, 1338, 1422, 1434, 1443, 1470, 2285
BstNSI	RCATGY	2 cut(s)	1062, 2221
BstPI	GGTNACC	1 cut(s)	485
BstSFI	CTRYAG	1 cut(s)	1728
BstUI	CGCG	2 cut(s)	57, 1524
BstV1I	GCAGC	8 cut(s)	103, 199, 211, 1129, 1363, 1726, 1819, 2230
BstV2I	GAAGAC	2 cut(s)	587, 1397
BstX2I	RGATCY	2 cut(s)	10, 757
BstYI	RGATCY	2 cut(s)	10, 757
BstZ17I	GTATAC	1 cut(s)	596
Bsu15I	ATCGAT	1 cut(s)	1501
Bsu36I	CCTNAGG	2 cut(s)	789, 872
BsuI	GTATCC	1 cut(s)	1864
BsuRI	GGCC	8 cut(s)	34, 51, 263, 472, 1247, 1420, 1772, 2231
BsuTUI	ATCGAT	1 cut(s)	1501
BtgI	CCRYGG	2 cut(s)	533, 1205
BtgZI	GCGATG	2 cut(s)	1539, 2247
BtrI	CACGTC	1 cut(s)	1556
BtsCI	GGATG	2 cut(s)	688, 1936
BtsI	GCAGTG	1 cut(s)	1624
BtsIMutI	CAGTG	3 cut(s)	591, 1624, 1882
BveI	ACCTGC	2 cut(s)	403, 511
Cac8I	GCNNGC	4 cut(s)	53, 57, 1245, 2281
CaiI	CAGNNNCTG	1 cut(s)	503
CfoI	GCGC	4 cut(s)	44, 57, 59, 1524
Cfr10I	RCCGGY	1 cut(s)	1999
Cfr13I	GGNCC	9 cut(s)	33, 454, 500, 568, 1222, 1245, 1670, 1771, 2082
ClaI	ATCGAT	1 cut(s)	1501
CseI	GACGC	2 cut(s)	303, 1322
Csp6I	GTAC	3 cut(s)	1016, 1784, 2020
CspAI	ACCGGT	1 cut(s)	1999
CviAII	CATG	6 cut(s)	534, 1059, 1219, 1989, 2086, 2218
CviQI	GTAC	3 cut(s)	1016, 1784, 2020
DdeI	CTNAG	8 cut(s)	203, 324, 561, 789, 872, 903, 1324, 1758
DpnI	GATC	8 cut(s)	12, 189, 282, 382, 759, 1504, 1510, 1574
DpnII	GATC	8 cut(s)	10, 187, 280, 380, 757, 1502, 1508, 1572
DraI	TTTAAA	2 cut(s)	820, 987
DraIII	CACNNNGTG	1 cut(s)	1991
EaeI	YGGCCR	1 cut(s)	2229
Eam1104I	CTCTTC	8 cut(s)	97, 130, 399, 541, 1065, 1266, 1842, 2246
EarI	CTCTTC	8 cut(s)	97, 130, 399, 541, 1065, 1266, 1842, 2246
EciI	GGCGGA	2 cut(s)	23, 118
Eco130I	CCWWGG	1 cut(s)	533
Eco24I	GRGCYC	2 cut(s)	1397, 1664
Eco47I	GGWCC	6 cut(s)	454, 500, 568, 1222, 1670, 2082
Eco57I	CTGAAG	3 cut(s)	78, 423, 1089
Eco81I	CCTNAGG	2 cut(s)	789, 872
Eco88I	CYCGRG	2 cut(s)	227, 2015
Eco91I	GGTNACC	1 cut(s)	485
EcoNI	CCTNNNNNAGG	1 cut(s)	2201
EcoO109I	RGGNCCY	1 cut(s)	500
EcoO65I	GGTNACC	1 cut(s)	485
EcoRII	CCWGG	8 cut(s)	796, 843, 1336, 1420, 1432, 1441, 1468, 2283
EcoT14I	CCWWGG	1 cut(s)	533
EcoT38I	GRGCYC	2 cut(s)	1397, 1664
ErhI	CCWWGG	1 cut(s)	533
Esp3I	CGTCTC	1 cut(s)	1593
FaeI	CATG	6 cut(s)	537, 1062, 1222, 1992, 2089, 2221
FaqI	GGGAC	2 cut(s)	306, 2074
FatI	CATG	6 cut(s)	533, 1058, 1218, 1988, 2085, 2217
FauI	CCCGC	1 cut(s)	1236
FbaI	TGATCA	1 cut(s)	1572
FblI	GTMKAC	1 cut(s)	595
FokI	GGATG	2 cut(s)	695, 1923
FriOI	GRGCYC	2 cut(s)	1397, 1664
FspBI	CTAG	4 cut(s)	183, 956, 1506, 2280
GlaI	GCGC	4 cut(s)	43, 56, 58, 1523
GsaI	CCCAGC	1 cut(s)	1931
GsuI	CTGGAG	3 cut(s)	737, 1569, 1716
HaeII	RGCGCY	1 cut(s)	45
HaeIII	GGCC	8 cut(s)	34, 51, 263, 472, 1247, 1420, 1772, 2231
HapII	CCGG	7 cut(s)	36, 1398, 1417, 1460, 1769, 1940, 2000
HgaI	GACGC	2 cut(s)	303, 1322
HhaI	GCGC	4 cut(s)	44, 57, 59, 1524
Hin1II	CATG	6 cut(s)	537, 1062, 1222, 1992, 2089, 2221
Hin6I	GCGC	4 cut(s)	42, 55, 57, 1522
HinP1I	GCGC	4 cut(s)	42, 55, 57, 1522
HincII	GTYRAC	2 cut(s)	641, 1537
HindII	GTYRAC	2 cut(s)	641, 1537
HpaI	GTTAAC	1 cut(s)	1537
HpaII	CCGG	7 cut(s)	36, 1398, 1417, 1460, 1769, 1940, 2000
HphI	GGTGA	3 cut(s)	155, 1288, 2147
Hpy166II	GTNNAC	4 cut(s)	596, 641, 1018, 1537
Hpy8I	GTNNAC	4 cut(s)	596, 641, 1018, 1537
Hpy99I	CGWCG	1 cut(s)	1895
HpyAV	CCTTC	9 cut(s)	142, 152, 559, 673, 851, 1168, 1756, 2182, 2197
HpyCH4IV	ACGT	2 cut(s)	1555, 2037
HpyCH4V	TGCA	9 cut(s)	199, 337, 467, 921, 1202, 1343, 1657, 1742, 1814
HpyF10VI	GCNNNNNNNGC	9 cut(s)	48, 199, 334, 503, 548, 946, 1370, 1438, 1465
HpyF3I	CTNAG	8 cut(s)	203, 324, 561, 789, 872, 903, 1324, 1758
HpySE526I	ACGT	2 cut(s)	1555, 2037
Hsp92II	CATG	6 cut(s)	537, 1062, 1222, 1992, 2089, 2221
HspAI	GCGC	4 cut(s)	42, 55, 57, 1522
Kpn2I	TCCGGA	1 cut(s)	1939
Ksp22I	TGATCA	1 cut(s)	1572
KspAI	GTTAAC	1 cut(s)	1537
Kzo9I	GATC	8 cut(s)	10, 187, 280, 380, 757, 1502, 1508, 1572
LguI	GCTCTTC	3 cut(s)	541, 1842, 2246
LmnI	GCTCC	8 cut(s)	511, 718, 793, 904, 1033, 1446, 1771, 1915
Lsp1109I	GCAGC	8 cut(s)	103, 199, 211, 1129, 1363, 1726, 1819, 2230
LweI	GCATC	2 cut(s)	292, 1751
MaeI	CTAG	4 cut(s)	183, 956, 1506, 2280
MaeII	ACGT	2 cut(s)	1555, 2037
MaeIII	GTNAC	3 cut(s)	143, 390, 485
MalI	GATC	8 cut(s)	12, 189, 282, 382, 759, 1504, 1510, 1574
MboI	GATC	8 cut(s)	10, 187, 280, 380, 757, 1502, 1508, 1572
MfeI	CAATTG	2 cut(s)	332, 1486
MflI	RGATCY	2 cut(s)	10, 757
MhlI	GDGCHC	2 cut(s)	1397, 1664
MlyI	GAGTC	2 cut(s)	644, 834
MmeI	TCCRAC	2 cut(s)	38, 2070
MroI	TCCGGA	1 cut(s)	1939
MslI	CAYNNNNRTG	1 cut(s)	1903
MspA1I	CMGCKG	1 cut(s)	1739
MspCI	CTTAAG	3 cut(s)	518, 941, 2198
MspI	CCGG	7 cut(s)	36, 1398, 1417, 1460, 1769, 1940, 2000
MunI	CAATTG	2 cut(s)	332, 1486
Mva1269I	GAATGC	5 cut(s)	923, 942, 1366, 1443, 1470
MvaI	CCWGG	8 cut(s)	798, 845, 1338, 1422, 1434, 1443, 1470, 2285
MvnI	CGCG	2 cut(s)	57, 1524
MwoI	GCNNNNNNNGC	9 cut(s)	48, 199, 334, 503, 548, 946, 1370, 1438, 1465
NciI	CCSGG	4 cut(s)	36, 1398, 1417, 1461
NcoI	CCATGG	1 cut(s)	533
NdeII	GATC	8 cut(s)	10, 187, 280, 380, 757, 1502, 1508, 1572
NheI	GCTAGC	1 cut(s)	2279
NlaIII	CATG	6 cut(s)	537, 1062, 1222, 1992, 2089, 2221
NlaIV	GGNNCC	8 cut(s)	12, 531, 720, 795, 1002, 1767, 1773, 2083
NmeAIII	GCCGAG	1 cut(s)	289
NmuCI	GTSAC	1 cut(s)	143
NspI	RCATGY	2 cut(s)	1062, 2221
NspV	TTCGAA	1 cut(s)	855
PaeR7I	CTCGAG	1 cut(s)	2015
PauI	GCGCGC	1 cut(s)	55
PciI	ACATGT	1 cut(s)	2217
PciSI	GCTCTTC	3 cut(s)	541, 1842, 2246
PctI	GAATGC	5 cut(s)	923, 942, 1366, 1443, 1470
PfeI	GAWTC	9 cut(s)	66, 86, 657, 1146, 1258, 1478, 1626, 1807, 1885
PflMI	CCANNNNNTGG	1 cut(s)	1254
PinAI	ACCGGT	1 cut(s)	1999
PleI	GAGTC	2 cut(s)	644, 833
PpsI	GAGTC	2 cut(s)	644, 833
PpuMI	RGGWCCY	1 cut(s)	500
PscI	ACATGT	1 cut(s)	2217
Psp5II	RGGWCCY	1 cut(s)	500
Psp6I	CCWGG	8 cut(s)	796, 843, 1336, 1420, 1432, 1441, 1468, 2283
PspEI	GGTNACC	1 cut(s)	485
PspFI	CCCAGC	1 cut(s)	1927
PspGI	CCWGG	8 cut(s)	796, 843, 1336, 1420, 1432, 1441, 1468, 2283
PspN4I	GGNNCC	8 cut(s)	12, 531, 720, 795, 1002, 1767, 1773, 2083
PspPI	GGNCC	9 cut(s)	33, 454, 500, 568, 1222, 1245, 1670, 1771, 2082
PspPPI	RGGWCCY	1 cut(s)	500
PstNI	CAGNNNCTG	1 cut(s)	503
PsuI	RGATCY	2 cut(s)	10, 757
PteI	GCGCGC	1 cut(s)	55
PvuII	CAGCTG	1 cut(s)	1739
RsaI	GTAC	3 cut(s)	1017, 1785, 2021
RsaNI	GTAC	3 cut(s)	1016, 1784, 2020
RseI	CAYNNNNRTG	1 cut(s)	1903
SapI	GCTCTTC	3 cut(s)	541, 1842, 2246
Sau3AI	GATC	8 cut(s)	10, 187, 280, 380, 757, 1502, 1508, 1572
Sau96I	GGNCC	9 cut(s)	33, 454, 500, 568, 1222, 1245, 1670, 1771, 2082
SchI	GAGTC	2 cut(s)	644, 834
SduI	GDGCHC	2 cut(s)	1397, 1664
SfaNI	GCATC	2 cut(s)	292, 1751
SfcI	CTRYAG	1 cut(s)	1728
Sfr274I	CTCGAG	1 cut(s)	2015
SfuI	TTCGAA	1 cut(s)	855
SinI	GGWCC	6 cut(s)	454, 500, 568, 1222, 1670, 2082
SlaI	CTCGAG	1 cut(s)	2015
SmiMI	CAYNNNNRTG	1 cut(s)	1903
SmlI	CTYRAG	6 cut(s)	518, 632, 941, 1611, 2015, 2198
SmoI	CTYRAG	6 cut(s)	518, 632, 941, 1611, 2015, 2198
SsiI	CCGC	8 cut(s)	8, 39, 129, 151, 755, 1225, 1243, 1373
SspI	AATATT	1 cut(s)	1871
SspMI	CTAG	4 cut(s)	183, 956, 1506, 2280
StyI	CCWWGG	1 cut(s)	533
TaiI	ACGT	2 cut(s)	1558, 2040
TaqII	GACCGA	1 cut(s)	2214
TatI	WGTACW	1 cut(s)	1015
TauI	GCSGC	2 cut(s)	42, 1376
TfiI	GAWTC	9 cut(s)	66, 86, 657, 1146, 1258, 1478, 1626, 1807, 1885
TscAI	CASTG	3 cut(s)	591, 1624, 1882
TseFI	GTSAC	1 cut(s)	143
TseI	GCWGC	8 cut(s)	116, 199, 212, 1117, 1376, 1739, 1832, 2243
Tsp45I	GTSAC	1 cut(s)	143
TspDTI	ATGAA	3 cut(s)	1207, 1292, 2264
TspRI	CASTG	3 cut(s)	591, 1624, 1882
Van91I	CCANNNNNTGG	1 cut(s)	1254
Vha464I	CTTAAG	3 cut(s)	518, 941, 2198
VpaK11BI	GGWCC	6 cut(s)	454, 500, 568, 1222, 1670, 2082
XagI	CCTNNNNNAGG	1 cut(s)	2201
XapI	RAATTY	5 cut(s)	477, 1299, 1601, 1825, 2295
XbaI	TCTAGA	1 cut(s)	1505
XceI	RCATGY	2 cut(s)	1062, 2221
XhoI	CTCGAG	1 cut(s)	2015
XmiI	GTMKAC	1 cut(s)	595
XspI	CTAG	4 cut(s)	183, 956, 1506, 2280

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.