Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0003545

Physical Location & Seq

Genomic Coordinates Forward (+)

285967 .. 289903

Gene Structure 3937 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g00490.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGTCCCTCTACTCCGTCCTCATGGCGGCGCTCACCCCAATTTCTCTATCAAGGTGGGCTGGAGACGCACGGTTTGAGGGTCGTGAGCGAGTGAAGTACACCAGAGACCAGATCTTACAGCTTAGAGAGGCTGTTGAGGTCCCTGATGAAATTCTAAAAGTGAAACAAGAAGTTGACGCTGAATTATTTGGCGTTGAAGATCAGAGCTGGGGTCGTGCAGAAACCAATCTGCCAGCTCAATCTCCAACTCCAGCTCCAGCTCAAAATCGTTATTCTGAGCCGGACAGCCGGGATTGGCGTGGCCGTTCTGTACCAGTTCCTACCGCTGGAGAGGAACGGTCTTGGGATACTCTTCGGGAGAATAAAGAGTCTGGTAATCGGTTTGATTACAGACAGCAAGAAGCAAATCAGTCTCAATTTTCAAGGACACAGAACCAAGGGGGAGGGCCTGCTCCCACTTTAATCAAAGCTGAGGTGCCATGGTCAGCTAGAAGGGGTACTCTATCTGATAAGGATCGCGTGTTGAAGACTGTGAAGGGGATTCTAAACAAGCTGACTCCGGAGAAGTTTGATCTCCTCAAAGGACAACTTATAGACTCTGGCATTACGTCGGCTGATATCTTAAAGGGTGTTATTTCACTGATATTTGATAAGGCCGTGCTAGAACCTACATTTTGCCCCATGTATGCTCGTCTCTGTTTTGATCTTAGTGAAAAGCTTCCCCAGTTCCCCTCAGATGAACCAGATGGTAAAGAAATCACTTTCAAGCGGGTCCTCTTGAATAACTGCCAGGAGGCTTTTGATGGCGCTGACAAATTGAGGGAAGAAGTGAGACAGTTGACTGCCCCTGAACAAGAGATGGAGCGTAGGGATAAAGAAAGATCCGCAAAGATTCGTACGCTGGGAAACATTCGTTTAATTGGAGAGCTTCTGAAGCAGAAGATGGTACCTGAAAGGATTGTACATCACATTGTTAAGGAGCTCTTAGGATCTGATAACAAAGTTTGTCCTGCTGAGGAAAACGTGGAAGCAATATGTCATTTTTTTAGCACTATTGGAAAGCAGCTTGATGAGAAGCCAAAATCACGCAGTATAAACGACATGTACTTCAGCCGAATGAAGGAACTGACAACAAACCCTCAATTGGCTCCAAGGTTGAGGTTCATGGTTCGTGATGTAATTGATTTGCGTTCCAATAACTGGGTTCCCAGGCGTGAAGAGATAAAAGCCAAAACCATCACTGAAATACATACGGAGGCAGAAAAAAATCTTGGATTGCGTCCGGGTGCTACTGCAAGCATCCGAAGTGGTCGTAACAACGTTTCTGGTGCTCAAGGGAGTACCAGCCCTGTAGGATATCCCAACAACCGACCTGGTTCAGGGGGTATGATGCCCGGAATGCCAGGAACAAGGAAGATGCCTGGGATGCCTGGAATGGATAATGACAATTGGGAGGTTCAGAGGACACGGTCAATGCCAAGGGGTGATGGGTTTGGTGTGCAGCCGGGTGGTGGGCATGGCCAGGTGCTGTTGGTTGGAAAATCAACATCAGTGAACACAAGGCTGTTACCTCAGGGTAGTGGTGTCCTTGGCAGTGGCAGGCCTAGTGCCTTGTTGCAGGGTAGTGGTGCCCCTCCTGCTCGTCCATCCAACTATGCTTACGGTGCAGAGCCTGTAGCTCAAGTGCCAGTGCCTGCTAGACCTGTTGCTGCTCCTTACGTGGCACCAGTTGTTGGAAAGCCACAAGCTCCAGCTCCAACTGCGGCTCCAAAGTTGAAACTAGATGAACTTCGGAGAAAAACAATCTCCCTTTTTGAGGAATATTTCAATATCGGACTCTTTGATGAAGCATTACTGTGCGTGGAGGAGCTACAATCTCCAGCTTACCATGCCGAGGTTGTCAAGGAAGGTATCGCCCTTGCACTAGAGAAGAGTCGACCATGTGTTGAACCACTTGTGAAGCTTCTTGAGTATTTGTTTTCTAAGAAGGTGCTTACGACTAGTGACGCAAGGAGTGGATGTTTACTCTATGCATCTATTCTGAACGATGTTGGCATTGACCTGCCAAAAGCACCAAGTAACTTTGGTCAAATTATAGGGAAATTAGTCTTGGTTGGAGGTTTGGATTTCAAGGTGGTGAAGGAGGTCCTGAAGGTGGTGGACGACGGCTACTTCCAGAAAGCTATATTGGATGCTGCACTGAAGATCGTTAGCTCTAGTCCGTCAGGACAAGGCCTGTTGGATTCACAAGCATCTGATGTTGACGCTTGCCGGAGCCTATTCTACAAAGCGGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03013 ko05416 map03013 map05416

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

766

Amino Acids

84.15

Weight (kDa)

8.69

Isoelectric Point (pI)

56.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003545)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57870 AT5G57870
fragaria_vesca	FvH4_1g00720 FvH4_1g00720 FvH4_2g41200
malus_domestica	MD02G1005900.v1.1 MD02G1006000.v1.1 MD08G1055400.v1.1 MD15G1150600.v1.1
prunus_persica	Prupe.1G395100_v2.0.a1 Prupe.7G265100_v2.0.a1
pyrus_communis	pycom02g00490 pycom08g04550 pycom14g07580 pycom15g13480
rosa_chinensis	RchiOBHm_Chr2g0085441 RchiOBHm_Chr6g0299311
rosa_laevigata	RLG00000011443 RLG00000015688
rosa_multiflora	Rmu_sc0007908.1_g000012 Rmu_ssc0000374.1_g000005
rosa_roxburghii	Rroxscaffold_2G00155380 Rroxscaffold_7G00168790
rosa_rugosa	Rorug01G0460400 Rorug06G0287100
rosa_samantha	Rh2AG008600 Rh2BG009900 Rh2CG010400 Rh2DG010800 Rh6AG398600 Rh6BG407000 Rh6CG413000 Rh6DG399800
rosa_wichuraiana	Rw2G000830 Rw6G034890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2070
Acc65I	GGTACC	1 cut(s)	946
AccB1I	GGYRCC	4 cut(s)	475, 946, 1628, 1723
AccB7I	CCANNNNNTGG	2 cut(s)	1200, 1733
AccI	GTMKAC	1 cut(s)	1936
AccII	CGCG	1 cut(s)	519
AccIII	TCCGGA	1 cut(s)	559
AciI	CCGC	6 cut(s)	26, 324, 769, 885, 1763, 2291
AclI	AACGTT	1 cut(s)	1320
AclWI	GGATC	3 cut(s)	522, 876, 997
AcoI	YGGCCR	2 cut(s)	301, 1519
AcsI	RAATTY	1 cut(s)	150
AcuI	CTGAAG	4 cut(s)	953, 1093, 2171, 2222
AfaI	GTAC	8 cut(s)	98, 312, 499, 898, 948, 963, 1106, 1342
AflIII	ACRYGT	1 cut(s)	1101
AgsI	TTSAA	9 cut(s)	197, 423, 526, 766, 781, 1777, 1828, 1949, 2131
AhlI	ACTAGT	1 cut(s)	2000
AjnI	CCWGG	7 cut(s)	789, 1208, 1372, 1402, 1420, 1429, 1521
AjuI	GAANNNNNNNTTGG	6 cut(s)	1254, 1286, 2093, 2125, 2171, 2203
Alw21I	GWGCWC	2 cut(s)	984, 1333
Alw26I	GTCTC	5 cut(s)	57, 99, 417, 698, 826
AlwI	GGATC	3 cut(s)	522, 876, 997
AlwNI	CAGNNNCTG	3 cut(s)	1528, 1673, 1694
Aor13HI	TCCGGA	1 cut(s)	559
AoxI	GGCC	7 cut(s)	301, 446, 654, 1519, 1601, 2233, 2292
ApeKI	GCWGC	4 cut(s)	1063, 1501, 1709, 2195
ApoI	RAATTY	1 cut(s)	150
ArsI	GACNNNNNNTTYG	2 cut(s)	56, 88
Asp700I	GAANNNNTTC	1 cut(s)	717
Asp718I	GGTACC	1 cut(s)	946
AspLEI	GCGC	2 cut(s)	31, 809
AspS9I	GGNCC	4 cut(s)	139, 446, 772, 2146
AsuC2I	CCSGG	4 cut(s)	290, 1284, 1395, 1506
AsuHPI	GGTGA	3 cut(s)	25, 1496, 2149
AvaII	GGWCC	3 cut(s)	139, 772, 2146
AxyI	CCTNAGG	1 cut(s)	1572
BaeGI	GKGCMC	1 cut(s)	1633
BalI	TGGCCA	1 cut(s)	1521
BanI	GGYRCC	4 cut(s)	475, 946, 1628, 1723
BanII	GRGCYC	1 cut(s)	984
BbsI	GAAGAC	1 cut(s)	533
Bbv12I	GWGCWC	2 cut(s)	984, 1333
BbvCI	CCTCAGC	2 cut(s)	471, 1014
BbvI	GCAGC	4 cut(s)	1075, 1513, 1696, 2182
BccI	CCATC	7 cut(s)	740, 797, 853, 937, 1244, 1481, 1654
BceAI	ACGGC	3 cut(s)	288, 641, 2182
BciT130I	CCWGG	7 cut(s)	791, 1210, 1374, 1404, 1422, 1431, 1523
BciVI	GTATCC	1 cut(s)	340
BcnI	CCSGG	4 cut(s)	290, 1284, 1395, 1506
BcoDI	GTCTC	5 cut(s)	57, 99, 417, 698, 826
BcuI	ACTAGT	1 cut(s)	2000
BfaI	CTAG	9 cut(s)	489, 662, 1605, 1698, 1781, 1925, 2001, 2217, 2296
BfmI	CTRYAG	2 cut(s)	1350, 1674
BfoI	RGCGCY	2 cut(s)	32, 810
BfuAI	ACCTGC	1 cut(s)	2070
BfuI	GTATCC	1 cut(s)	340
BglII	AGATCT	1 cut(s)	111
BisI	GCNGC	7 cut(s)	27, 1064, 1502, 1710, 1764, 2196, 2292
BlsI	GCNGC	7 cut(s)	28, 1065, 1503, 1711, 1765, 2197, 2293
Bme18I	GGWCC	3 cut(s)	139, 772, 2146
BmgT120I	GGNCC	4 cut(s)	139, 446, 772, 2146
BmrI	ACTGGG	2 cut(s)	718, 1210
BmsI	GCATC	7 cut(s)	1308, 1380, 1407, 1416, 2042, 2182, 2261
BmuI	ACTGGG	2 cut(s)	718, 1210
BpiI	GAAGAC	1 cut(s)	533
BpmI	CTGGAG	6 cut(s)	81, 234, 240, 348, 1734, 1863
Bpu10I	CCTNAGC	2 cut(s)	471, 1014
BpuEI	CTTGAG	3 cut(s)	1317, 1665, 1988
BpuMI	CCSGG	4 cut(s)	290, 1284, 1395, 1506
BsaAI	YACGTR	1 cut(s)	1720
BsaBI	GATNNNNATC	1 cut(s)	513
BsaI	GGTCTC	1 cut(s)	99
BsaJI	CCNNGG	8 cut(s)	436, 479, 1151, 1208, 1421, 1478, 1588, 1893
BsaWI	WCCGGW	1 cut(s)	559
BsaXI	ACNNNNNCTCC	6 cut(s)	238, 268, 1750, 1780, 2005, 2035
Bse1I	ACTGG	5 cut(s)	314, 724, 1205, 1688, 1727
Bse21I	CCTNAGG	1 cut(s)	1572
Bse8I	GATNNNNATC	1 cut(s)	513
BseAI	TCCGGA	1 cut(s)	559
BseBI	CCWGG	7 cut(s)	791, 1210, 1374, 1404, 1422, 1431, 1523
BseDI	CCNNGG	8 cut(s)	436, 479, 1151, 1208, 1421, 1478, 1588, 1893
BseGI	GGATG	5 cut(s)	1299, 1431, 1646, 2024, 2197
BseJI	GATNNNNATC	1 cut(s)	513
BseMII	CTCAG	5 cut(s)	267, 462, 747, 1005, 1586
BseNI	ACTGG	5 cut(s)	314, 724, 1205, 1688, 1727
BseRI	GAGGAG	2 cut(s)	566, 1880
BseSI	GKGCMC	1 cut(s)	1633
BseXI	GCAGC	4 cut(s)	1075, 1513, 1696, 2182
BseYI	CCCAGC	2 cut(s)	207, 901
BsgI	GTGCAG	4 cut(s)	237, 1520, 1686, 2181
Bsh1236I	CGCG	1 cut(s)	519
BshFI	GGCC	7 cut(s)	303, 448, 656, 1521, 1603, 2235, 2294
BshNI	GGYRCC	4 cut(s)	475, 946, 1628, 1723
BsiHKAI	GWGCWC	2 cut(s)	984, 1333
BsiSI	CCGG	7 cut(s)	281, 289, 560, 1283, 1395, 1505, 2272
BsiWI	CGTACG	1 cut(s)	896
BslFI	GGGAC	1 cut(s)	125
BsmAI	GTCTC	5 cut(s)	57, 99, 417, 698, 826
BsmBI	CGTCTC	2 cut(s)	57, 698
BsmFI	GGGAC	1 cut(s)	125
BsmI	GAATGC	1 cut(s)	1404
BsnI	GGCC	7 cut(s)	303, 448, 656, 1521, 1603, 2235, 2294
Bso31I	GGTCTC	1 cut(s)	99
Bsp1286I	GDGCHC	3 cut(s)	984, 1333, 1633
Bsp13I	TCCGGA	1 cut(s)	559
Bsp1407I	TGTACA	1 cut(s)	961
Bsp143I	GATC	8 cut(s)	111, 199, 514, 571, 703, 881, 989, 2205
Bsp19I	CCATGG	1 cut(s)	479
BspACI	CCGC	6 cut(s)	26, 324, 769, 885, 1763, 2291
BspANI	GGCC	7 cut(s)	303, 448, 656, 1521, 1603, 2235, 2294
BspCNI	CTCAG	5 cut(s)	268, 463, 746, 1006, 1585
BspEI	TCCGGA	1 cut(s)	559
BspFNI	CGCG	1 cut(s)	519
BspMI	ACCTGC	1 cut(s)	2070
BspPI	GGATC	3 cut(s)	522, 876, 997
BspT107I	GGYRCC	4 cut(s)	475, 946, 1628, 1723
BspTNI	GGTCTC	1 cut(s)	99
BsrGI	TGTACA	1 cut(s)	961
BsrI	ACTGG	5 cut(s)	314, 724, 1205, 1688, 1727
BssECI	CCNNGG	8 cut(s)	436, 479, 1151, 1208, 1421, 1478, 1588, 1893
BssMI	GATC	8 cut(s)	111, 199, 514, 571, 703, 881, 989, 2205
BssT1I	CCWWGG	5 cut(s)	436, 479, 1151, 1478, 1588
Bst2UI	CCWGG	7 cut(s)	791, 1210, 1374, 1404, 1422, 1431, 1523
Bst4CI	ACNGT	7 cut(s)	72, 339, 532, 837, 1470, 1664, 1857
Bst6I	CTCTTC	3 cut(s)	357, 1212, 1925
BstAUI	TGTACA	1 cut(s)	961
BstBAI	YACGTR	1 cut(s)	1720
BstC8I	GCNNGC	6 cut(s)	234, 450, 1297, 1601, 1695, 2269
BstDEI	CTNAG	9 cut(s)	122, 276, 471, 707, 733, 985, 1014, 1572, 1983
BstDSI	CCRYGG	1 cut(s)	479
BstENI	CCTNNNNNAGG	2 cut(s)	1377, 1814
BstF5I	GGATG	5 cut(s)	1299, 1431, 1646, 2024, 2197
BstFNI	CGCG	1 cut(s)	519
BstH2I	RGCGCY	2 cut(s)	32, 810
BstHHI	GCGC	2 cut(s)	31, 809
BstKTI	GATC	8 cut(s)	114, 202, 517, 574, 706, 884, 992, 2208
BstMAI	GTCTC	5 cut(s)	57, 99, 417, 698, 826
BstMBI	GATC	8 cut(s)	111, 199, 514, 571, 703, 881, 989, 2205
BstMWI	GCNNNNNNNGC	8 cut(s)	65, 934, 1399, 1426, 1637, 1664, 1760, 1889
BstNI	CCWGG	7 cut(s)	791, 1210, 1374, 1404, 1422, 1431, 1523
BstNSI	RCATGY	1 cut(s)	1105
BstSFI	CTRYAG	2 cut(s)	1350, 1674
BstSLI	GKGCMC	1 cut(s)	1633
BstUI	CGCG	1 cut(s)	519
BstV1I	GCAGC	4 cut(s)	1075, 1513, 1696, 2182
BstV2I	GAAGAC	1 cut(s)	533
BstX2I	RGATCY	3 cut(s)	111, 881, 989
BstYI	RGATCY	3 cut(s)	111, 881, 989
Bsu36I	CCTNAGG	1 cut(s)	1572
BsuI	GTATCC	1 cut(s)	340
BsuRI	GGCC	7 cut(s)	303, 448, 656, 1521, 1603, 2235, 2294
BtgI	CCRYGG	1 cut(s)	479
BtsCI	GGATG	5 cut(s)	1299, 1431, 1646, 2024, 2197
BtsI	GCAGTG	1 cut(s)	1600
BtsIMutI	CAGTG	6 cut(s)	638, 1239, 1557, 1600, 1695, 2198
BveI	ACCTGC	1 cut(s)	2070
Cac8I	GCNNGC	6 cut(s)	234, 450, 1297, 1601, 1695, 2269
CaiI	CAGNNNCTG	3 cut(s)	1528, 1673, 1694
CfoI	GCGC	2 cut(s)	31, 809
Cfr13I	GGNCC	4 cut(s)	139, 446, 772, 2146
CseI	GACGC	5 cut(s)	74, 185, 1268, 2015, 2273
CsiI	ACCWGGT	1 cut(s)	1372
Csp6I	GTAC	8 cut(s)	97, 311, 498, 897, 947, 962, 1105, 1341
CviAII	CATG	8 cut(s)	22, 480, 682, 1102, 1165, 1517, 1889, 1941
CviQI	GTAC	8 cut(s)	97, 311, 498, 897, 947, 962, 1105, 1341
DdeI	CTNAG	9 cut(s)	122, 276, 471, 707, 733, 985, 1014, 1572, 1983
DpnI	GATC	8 cut(s)	113, 201, 516, 573, 705, 883, 991, 2207
DpnII	GATC	8 cut(s)	111, 199, 514, 571, 703, 881, 989, 2205
EaeI	YGGCCR	2 cut(s)	301, 1519
Eam1104I	CTCTTC	3 cut(s)	357, 1212, 1925
EarI	CTCTTC	3 cut(s)	357, 1212, 1925
Ecl136II	GAGCTC	1 cut(s)	982
Eco130I	CCWWGG	5 cut(s)	436, 479, 1151, 1478, 1588
Eco147I	AGGCCT	2 cut(s)	1603, 2235
Eco24I	GRGCYC	1 cut(s)	984
Eco31I	GGTCTC	1 cut(s)	99
Eco32I	GATATC	2 cut(s)	619, 1358
Eco47I	GGWCC	3 cut(s)	139, 772, 2146
Eco53kI	GAGCTC	1 cut(s)	982
Eco57I	CTGAAG	4 cut(s)	953, 1093, 2171, 2222
Eco81I	CCTNAGG	1 cut(s)	1572
EcoICRI	GAGCTC	1 cut(s)	982
EcoNI	CCTNNNNNAGG	2 cut(s)	1377, 1814
EcoO109I	RGGNCCY	4 cut(s)	139, 446, 772, 2146
EcoRII	CCWGG	7 cut(s)	789, 1208, 1372, 1402, 1420, 1429, 1521
EcoRV	GATATC	2 cut(s)	619, 1358
EcoT14I	CCWWGG	5 cut(s)	436, 479, 1151, 1478, 1588
EcoT22I	ATGCAT	1 cut(s)	2035
EcoT38I	GRGCYC	1 cut(s)	984
ErhI	CCWWGG	5 cut(s)	436, 479, 1151, 1478, 1588
Esp3I	CGTCTC	2 cut(s)	57, 698
FaeI	CATG	8 cut(s)	25, 483, 685, 1105, 1168, 1520, 1892, 1944
FalI	AAGNNNNNCTT	4 cut(s)	573, 605, 968, 1000
FaqI	GGGAC	1 cut(s)	125
FatI	CATG	8 cut(s)	21, 479, 681, 1101, 1164, 1516, 1888, 1940
FauI	CCCGC	1 cut(s)	762
FblI	GTMKAC	1 cut(s)	1936
Fnu4HI	GCNGC	7 cut(s)	27, 1064, 1502, 1710, 1764, 2196, 2292
FokI	GGATG	5 cut(s)	1286, 1438, 1633, 2031, 2204
FriOI	GRGCYC	1 cut(s)	984
Fsp4HI	GCNGC	7 cut(s)	27, 1064, 1502, 1710, 1764, 2196, 2292
FspBI	CTAG	9 cut(s)	489, 662, 1605, 1698, 1781, 1925, 2001, 2217, 2296
GlaI	GCGC	2 cut(s)	30, 808
GluI	GCNGC	7 cut(s)	27, 1064, 1502, 1710, 1764, 2196, 2292
GsaI	CCCAGC	2 cut(s)	211, 905
GsuI	CTGGAG	6 cut(s)	81, 234, 240, 348, 1734, 1863
HaeII	RGCGCY	2 cut(s)	32, 810
HaeIII	GGCC	7 cut(s)	303, 448, 656, 1521, 1603, 2235, 2294
HapII	CCGG	7 cut(s)	281, 289, 560, 1283, 1395, 1505, 2272
HgaI	GACGC	5 cut(s)	74, 185, 1268, 2015, 2273
HhaI	GCGC	2 cut(s)	31, 809
Hin1II	CATG	8 cut(s)	25, 483, 685, 1105, 1168, 1520, 1892, 1944
Hin6I	GCGC	2 cut(s)	29, 807
HinP1I	GCGC	2 cut(s)	29, 807
HincII	GTYRAC	4 cut(s)	175, 840, 1937, 2263
HindII	GTYRAC	4 cut(s)	175, 840, 1937, 2263
HindIII	AAGCTT	2 cut(s)	716, 1961
HinfI	GANTC	8 cut(s)	368, 541, 556, 596, 892, 1836, 1933, 2243
HpaII	CCGG	7 cut(s)	281, 289, 560, 1283, 1395, 1505, 2272
HphI	GGTGA	3 cut(s)	25, 1496, 2149
Hpy166II	GTNNAC	8 cut(s)	99, 175, 840, 1555, 1937, 2024, 2161, 2263
Hpy188III	TCNNGA	9 cut(s)	83, 356, 560, 778, 1172, 1967, 2149, 2176, 2226
Hpy8I	GTNNAC	8 cut(s)	99, 175, 840, 1555, 1937, 2024, 2161, 2263
Hpy99I	CGWCG	2 cut(s)	613, 2168
HpyAV	CCTTC	7 cut(s)	486, 529, 1114, 1901, 1981, 2134, 2146
HpyCH4III	ACNGT	7 cut(s)	72, 339, 532, 837, 1470, 1664, 1857
HpyCH4IV	ACGT	4 cut(s)	608, 1023, 1320, 1719
HpyCH4V	TGCA	8 cut(s)	218, 1295, 1501, 1618, 1667, 1922, 2033, 2198
HpyF10VI	GCNNNNNNNGC	8 cut(s)	65, 934, 1399, 1426, 1637, 1664, 1760, 1889
HpyF3I	CTNAG	9 cut(s)	122, 276, 471, 707, 733, 985, 1014, 1572, 1983
HpySE526I	ACGT	4 cut(s)	608, 1023, 1320, 1719
Hsp92II	CATG	8 cut(s)	25, 483, 685, 1105, 1168, 1520, 1892, 1944
HspAI	GCGC	2 cut(s)	29, 807
Kpn2I	TCCGGA	1 cut(s)	559
KpnI	GGTACC	1 cut(s)	950
Kzo9I	GATC	8 cut(s)	111, 199, 514, 571, 703, 881, 989, 2205
Lsp1109I	GCAGC	4 cut(s)	1075, 1513, 1696, 2182
LweI	GCATC	7 cut(s)	1308, 1380, 1407, 1416, 2042, 2182, 2261
MabI	ACCWGGT	1 cut(s)	1372
MaeI	CTAG	9 cut(s)	489, 662, 1605, 1698, 1781, 1925, 2001, 2217, 2296
MaeII	ACGT	4 cut(s)	608, 1023, 1320, 1719
MaeIII	GTNAC	4 cut(s)	1313, 1566, 2003, 2078
MalI	GATC	8 cut(s)	113, 201, 516, 573, 705, 883, 991, 2207
MboI	GATC	8 cut(s)	111, 199, 514, 571, 703, 881, 989, 2205
MboII	GAAGA	9 cut(s)	209, 344, 538, 836, 952, 1229, 1426, 1942, 2215
MfeI	CAATTG	2 cut(s)	1142, 1447
MflI	RGATCY	3 cut(s)	111, 881, 989
MhlI	GDGCHC	3 cut(s)	984, 1333, 1633
MlsI	TGGCCA	1 cut(s)	1521
MluNI	TGGCCA	1 cut(s)	1521
MlyI	GAGTC	5 cut(s)	377, 550, 590, 1830, 1942
MmeI	TCCRAC	7 cut(s)	269, 1516, 1674, 1714, 1781, 2095, 2220
Mox20I	TGGCCA	1 cut(s)	1521
Mph1103I	ATGCAT	1 cut(s)	2035
MroI	TCCGGA	1 cut(s)	559
MroXI	GAANNNNTTC	1 cut(s)	717
MscI	TGGCCA	1 cut(s)	1521
MseI	TTAA	4 cut(s)	461, 623, 917, 975
MslI	CAYNNNNRTG	1 cut(s)	1855
Msp20I	TGGCCA	1 cut(s)	1521
MspA1I	CMGCKG	1 cut(s)	326
MspI	CCGG	7 cut(s)	281, 289, 560, 1283, 1395, 1505, 2272
MunI	CAATTG	2 cut(s)	1142, 1447
Mva1269I	GAATGC	1 cut(s)	1404
MvaI	CCWGG	7 cut(s)	791, 1210, 1374, 1404, 1422, 1431, 1523
MvnI	CGCG	1 cut(s)	519
MwoI	GCNNNNNNNGC	8 cut(s)	65, 934, 1399, 1426, 1637, 1664, 1760, 1889
NciI	CCSGG	4 cut(s)	290, 1284, 1395, 1506
NcoI	CCATGG	1 cut(s)	479
NdeII	GATC	8 cut(s)	111, 199, 514, 571, 703, 881, 989, 2205
NlaIII	CATG	8 cut(s)	25, 483, 685, 1105, 1168, 1520, 1892, 1944
NmeAIII	GCCGAG	1 cut(s)	1918
NmuCI	GTSAC	1 cut(s)	2003
NsiI	ATGCAT	1 cut(s)	2035
NspI	RCATGY	1 cut(s)	1105
PceI	AGGCCT	2 cut(s)	1603, 2235
PciI	ACATGT	1 cut(s)	1101
PctI	GAATGC	1 cut(s)	1404
PdmI	GAANNNNTTC	1 cut(s)	717
PfeI	GAWTC	3 cut(s)	541, 892, 2243
Pfl23II	CGTACG	1 cut(s)	896
PflFI	GACNNNGTC	1 cut(s)	1468
PflMI	CCANNNNNTGG	2 cut(s)	1200, 1733
PkrI	GCNGC	7 cut(s)	28, 1065, 1503, 1711, 1765, 2197, 2293
PleI	GAGTC	5 cut(s)	376, 550, 590, 1830, 1941
PpsI	GAGTC	5 cut(s)	376, 550, 590, 1830, 1941
Ppu21I	YACGTR	1 cut(s)	1720
PpuMI	RGGWCCY	3 cut(s)	139, 772, 2146
PscI	ACATGT	1 cut(s)	1101
Psp124BI	GAGCTC	1 cut(s)	984
Psp1406I	AACGTT	1 cut(s)	1320
Psp5II	RGGWCCY	3 cut(s)	139, 772, 2146
Psp6I	CCWGG	7 cut(s)	789, 1208, 1372, 1402, 1420, 1429, 1521
PspFI	CCCAGC	2 cut(s)	207, 901
PspGI	CCWGG	7 cut(s)	789, 1208, 1372, 1402, 1420, 1429, 1521
PspLI	CGTACG	1 cut(s)	896
PspPI	GGNCC	4 cut(s)	139, 446, 772, 2146
PspPPI	RGGWCCY	3 cut(s)	139, 772, 2146
PstNI	CAGNNNCTG	3 cut(s)	1528, 1673, 1694
PsuI	RGATCY	3 cut(s)	111, 881, 989
PsyI	GACNNNGTC	1 cut(s)	1468
RsaI	GTAC	8 cut(s)	98, 312, 499, 898, 948, 963, 1106, 1342
RsaNI	GTAC	8 cut(s)	97, 311, 498, 897, 947, 962, 1105, 1341
RseI	CAYNNNNRTG	1 cut(s)	1855
SacI	GAGCTC	1 cut(s)	984
SalI	GTCGAC	1 cut(s)	1935
SaqAI	TTAA	4 cut(s)	461, 623, 917, 975
SatI	GCNGC	7 cut(s)	27, 1064, 1502, 1710, 1764, 2196, 2292
Sau3AI	GATC	8 cut(s)	111, 199, 514, 571, 703, 881, 989, 2205
Sau96I	GGNCC	4 cut(s)	139, 446, 772, 2146
SchI	GAGTC	5 cut(s)	377, 550, 590, 1830, 1942
SduI	GDGCHC	3 cut(s)	984, 1333, 1633
SexAI	ACCWGGT	1 cut(s)	1372
SfaNI	GCATC	7 cut(s)	1308, 1380, 1407, 1416, 2042, 2182, 2261
SfcI	CTRYAG	2 cut(s)	1350, 1674
SinI	GGWCC	3 cut(s)	139, 772, 2146
SmiMI	CAYNNNNRTG	1 cut(s)	1855
SmlI	CTYRAG	3 cut(s)	1332, 1680, 1967
SmoI	CTYRAG	3 cut(s)	1332, 1680, 1967
SpeI	ACTAGT	1 cut(s)	2000
SseBI	AGGCCT	2 cut(s)	1603, 2235
SsiI	CCGC	6 cut(s)	26, 324, 769, 885, 1763, 2291
SspI	AATATT	1 cut(s)	1823
SspMI	CTAG	9 cut(s)	489, 662, 1605, 1698, 1781, 1925, 2001, 2217, 2296
SstI	GAGCTC	1 cut(s)	984
StuI	AGGCCT	2 cut(s)	1603, 2235
StyI	CCWWGG	5 cut(s)	436, 479, 1151, 1478, 1588
TaaI	ACNGT	7 cut(s)	72, 339, 532, 837, 1470, 1664, 1857
TaiI	ACGT	4 cut(s)	611, 1026, 1323, 1722
TaqI	TCGA	1 cut(s)	1936
TatI	WGTACW	3 cut(s)	96, 961, 1104
TauI	GCSGC	3 cut(s)	29, 1766, 2294
TfiI	GAWTC	3 cut(s)	541, 892, 2243
Tru1I	TTAA	4 cut(s)	461, 623, 917, 975
Tru9I	TTAA	4 cut(s)	461, 623, 917, 975
TscAI	CASTG	6 cut(s)	645, 1246, 1557, 1600, 1695, 2205
TseFI	GTSAC	1 cut(s)	2003
TseI	GCWGC	4 cut(s)	1063, 1501, 1709, 2195
Tsp45I	GTSAC	1 cut(s)	2003
TspDTI	ATGAA	6 cut(s)	162, 753, 1133, 1153, 1800, 1860
TspGWI	ACGGA	3 cut(s)	4, 1268, 2211
TspRI	CASTG	6 cut(s)	645, 1246, 1557, 1600, 1695, 2205
Tth111I	GACNNNGTC	1 cut(s)	1468
Van91I	CCANNNNNTGG	2 cut(s)	1200, 1733
VpaK11BI	GGWCC	3 cut(s)	139, 772, 2146
XagI	CCTNNNNNAGG	2 cut(s)	1377, 1814
XapI	RAATTY	1 cut(s)	150
XceI	RCATGY	1 cut(s)	1105
XmiI	GTMKAC	1 cut(s)	1936
XmnI	GAANNNNTTC	1 cut(s)	717
XspI	CTAG	9 cut(s)	489, 662, 1605, 1698, 1781, 1925, 2001, 2217, 2296
Zsp2I	ATGCAT	1 cut(s)	2035

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.