Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003545

Physical Location & Seq

Genomic Coordinates Forward (+)

60449875 .. 60454553

Gene Structure 4679 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ26875

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGATGGCGGATCCGACTGTGATAAGTTTGAGGCCCGGCGGCGCTATTGGCCTGCGCCCCCCACGATTCCTCACATCTCGCCTCGATTCCTCTTCAGAGCCTCAATCCTCCAATGCTGCTCTCTCTTCCGCCTTCAAGACTGGTGACTTGCGGTTTGAAGGTCGTGAGCGTGTTCGATATACTAGAGATCAGCTAATGCAGCTTAGAGAGGCTGCCACTACTATCCCCGAGGGTATTCTGAAGATTAAACAAGAAATAGAGGCCGAGTTTGGTGGAGATGATCCTACTTGGGGACGCACAGATGCCAACCCACAGCCTCAATCGCAAGGTCGTTATACTGAGTTAGATAACCGTGATTGGCGTGGTCGATCTGGACAGTTACCTGCTTCTGAAGAGGAAAGAAATGATTTTTCAAGGCGACAGGGATTGAATAACCAGCAGGACCAACAATTTGCAAGGCCACAAATTTCTGGTAACCAAGTGGCAGGACCTGCTCCTGTTCTTCTTAAGGCGGAGGTTCCATGGTCAGCTCGAAGAGCAAATCTCTCTGAGAAGGACCGTGTATTGAAGACAGTGAAAGGTATACTGAACAAATTGACCCCAGAGAAGTTTGATGTTCTCAAGGGTCAACTAATTGACTCTGGAATCACAAATCCAGATATTTTGAAGGATGTTATCTTTCTGATATTTGATAAGGCTGTGCTGGAGCCAACATTTTGTCCGATGTATGCCCTTTTATGTGCGGATCTTAATGCGAAACTTCCTCCTTTTCCACCTGAGGAGCCTGGTGGGAAAGAAATCACTTTTAAACGAGTCCTGTTGAATAACTGCCAGGAGGCTTTCGAAGGTGCTGACAACCTGAGGGCAGAAATTAGGCAGATGACTGCTCCTGAGCAAGAAATGGAATGCAGAGATAAAGAACGAATGCTGAAGTTGCGAACTCTAGGAAACATACGCCTTATTGGGGAACTTTTAAAGCAGAAGATGGTGCCTGAAAAGATTGTACACCATATTGTTCAGGAGCTTCTGGGATATGATGGAAAAACATGCCCTGCTGAAGAGAATGTAGAGGCAATATGTCAGTTTTTCAACACCATTGGTAAGCAGCTTGATGAGAGCCAAAAATCTCGCCGAATCAACGATACCTATTTCAGTAGGTTGAAGGAACTGACTACAAACTCCCAACTTGCACCACGGTTGAGGTTCATGGTCCGCAATGTTCTTGATATGCGGGCCAACAACTGGATTCCAAGACGGGAAGAGGTGAAAGCAAAGACTATAACTGAAATTCATTCAGAAGCAGAAAAGAACTTAGGGTTGCGTCCAGGTGCAACGGCAACGATAAGGAATGCTCGTATTGCAGCTGCCTCTGGGGATTTGAGCCCCGGAGGTCTTCCTGCTACCCGGCCTGGCTATATGCCTGGAATGCCTGGAAGCAGGAAAATGCCGGGAATGCCTGGACTTGATTCTGACAATTGGGAGGTTTATCGATCTAGATCAATGACCAAGCGCGATGGTTTGGTTAACTCTCCATCTGGAGGACGTGTCCAGCCACCGTTGATCAGCAAAGCACCGTCTCTTAATTCAAAATTTTTACCTCAAGGCAGTGGTGGAATCATAACTGGGAAAACAAGTGCCTTGTTGCAGGGCTCTGGTGGTCCTCCTCGAACTAATTTGATTTCTGGAGTTGAACCTCTTGCTCAAAACGCCAAGCCTACAGTTCCAGCTGCATCATCAGTTTCTTCTGAGAAGGCTCTGGCCCCTGAAATTGTACCGACTTCTGCTAAACCTCTGATTCCTGCAACAGTACCAAATTCTGCTGCTCTTCTTAAAAAAACTGTATCCCTGCTGGAAGAATATTTCAGTGTTCGGATTCTCGATGAGGCACTTCAATGTGTGGAGGAGCTGAAAGCCCCAGCCTACCATCCTGAGTTTGTTAAAGAAGCTATTGCTCTTGCTCTGGATAAGAGCCCACCATGTGTAGAACCGGTCATAAAACTTCTCGAGTACCTGTTCAGTAAAAACGTTTTGACATCGAGAGATATAGGGACTGGTTGCCTTTTATATGGGTCAATGTTGGACGAAATCGGCATTGATTTGCCGAAAGCACCAAATAATTTTGGTGAGATTATTGGGAAGTTGGCTCTGGCAGGGGCATTGGACTTCAAGGTTGTGAAGGAAATCCTTGAGAAGGTGGAAGATGACATGTATCGGTCGGCCATTTTTGGTGCTGCTATGAAGAGCATTACATCGCAAGATTTTTTGGCTAGCCAGGAAACTGAAATTCAGGCGTGTAAAAGTTTGCTTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03013 ko05416 map03013 map05416

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

770

Amino Acids

84.65

Weight (kDa)

8.33

Isoelectric Point (pI)

53.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIF4G	PF02854	189 - 414	4.5e-54	MIF4G domain
MA3	PF02847	611 - 721	2.7e-25	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003545)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57870 AT5G57870
fragaria_vesca	FvH4_1g00720 FvH4_1g00720 FvH4_2g41200
malus_domestica	MD02G1005900.v1.1 MD02G1006000.v1.1 MD08G1055400.v1.1 MD15G1150600.v1.1
prunus_persica	Prupe.1G395100_v2.0.a1 Prupe.7G265100_v2.0.a1
pyrus_communis	pycom02g00490 pycom08g04550 pycom14g07580 pycom15g13480
rosa_chinensis	RchiOBHm_Chr2g0085441 RchiOBHm_Chr6g0299311
rosa_laevigata	RLG00000011443 RLG00000015688
rosa_multiflora	Rmu_sc0007908.1_g000012 Rmu_ssc0000374.1_g000005
rosa_roxburghii	Rroxscaffold_2G00155380 Rroxscaffold_7G00168790
rosa_rugosa	Rorug01G0460400 Rorug06G0287100
rosa_samantha	Rh2AG008600 Rh2BG009900 Rh2CG010400 Rh2DG010800 Rh6AG398600 Rh6BG407000 Rh6CG413000 Rh6DG399800
rosa_wichuraiana	Rw2G000830 Rw6G034890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	391, 499
AccB1I	GGYRCC	1 cut(s)	988
AccB7I	CCANNNNNTGG	1 cut(s)	1242
AccI	GTMKAC	1 cut(s)	583
AccII	CGCG	1 cut(s)	1512
AciI	CCGC	8 cut(s)	8, 39, 129, 151, 512, 743, 1213, 1231
AclI	AACGTT	1 cut(s)	2025
AclWI	GGATC	4 cut(s)	5, 18, 275, 753
AcoI	YGGCCR	1 cut(s)	2217
AcsI	RAATTY	5 cut(s)	465, 1287, 1589, 1813, 2283
AcuI	CTGAAG	5 cut(s)	78, 260, 411, 950, 1077
AdeI	CACNNNGTG	1 cut(s)	1979
AfaI	GTAC	4 cut(s)	1005, 1773, 1809, 2009
AfiI	CCNNNNNNNGG	5 cut(s)	290, 964, 1242, 1538, 2191
AflII	CTTAAG	1 cut(s)	506
AflIII	ACRYGT	2 cut(s)	1543, 2205
AgeI	ACCGGT	1 cut(s)	1987
AjiI	CACGTC	1 cut(s)	1544
AjnI	CCWGG	8 cut(s)	784, 831, 1324, 1408, 1420, 1429, 1456, 2271
AluBI	AGCT	9 cut(s)	193, 202, 530, 1024, 1108, 1364, 1727, 1906, 1946
AluI	AGCT	9 cut(s)	193, 202, 530, 1024, 1108, 1364, 1727, 1906, 1946
Alw26I	GTCTC	1 cut(s)	1581
AlwI	GGATC	4 cut(s)	5, 18, 275, 753
AlwNI	CAGNNNCTG	1 cut(s)	491
Ama87I	CYCGRG	2 cut(s)	227, 2003
AoxI	GGCC	8 cut(s)	32, 49, 261, 458, 1233, 1406, 1758, 2217
ApeKI	GCWGC	9 cut(s)	116, 199, 212, 1105, 1361, 1364, 1727, 1820, 2231
ApoI	RAATTY	5 cut(s)	465, 1287, 1589, 1813, 2283
ArsI	GACNNNNNNTTYG	4 cut(s)	137, 169, 434, 466
AsiGI	ACCGGT	1 cut(s)	1987
AspLEI	GCGC	3 cut(s)	44, 57, 1512
AspS9I	GGNCC	8 cut(s)	33, 442, 488, 556, 1210, 1233, 1658, 1759
AsuC2I	CCSGG	4 cut(s)	36, 1386, 1405, 1449
AsuHPI	GGTGA	3 cut(s)	155, 1276, 2135
AsuII	TTCGAA	1 cut(s)	843
AsuNHI	GCTAGC	1 cut(s)	2267
AvaI	CYCGRG	2 cut(s)	227, 2003
AvaII	GGWCC	5 cut(s)	442, 488, 556, 1210, 1658
AxyI	CCTNAGG	2 cut(s)	777, 860
BamHI	GGATCC	1 cut(s)	10
BanI	GGYRCC	1 cut(s)	988
BanII	GRGCYC	3 cut(s)	1385, 1652, 1973
BbsI	GAAGAC	2 cut(s)	575, 1385
BbvI	GCAGC	9 cut(s)	103, 199, 211, 1117, 1351, 1373, 1714, 1807, 2218
BccI	CCATC	5 cut(s)	979, 1031, 1508, 1540, 1932
BceAI	ACGGC	1 cut(s)	1350
BciT130I	CCWGG	8 cut(s)	786, 833, 1326, 1410, 1422, 1431, 1458, 2273
BciVI	GTATCC	1 cut(s)	1852
BclI	TGATCA	1 cut(s)	1560
BcnI	CCSGG	4 cut(s)	36, 1386, 1405, 1449
BcoDI	GTCTC	1 cut(s)	1581
BfaI	CTAG	4 cut(s)	183, 944, 1494, 2268
BfmI	CTRYAG	1 cut(s)	1716
BfoI	RGCGCY	1 cut(s)	45
BfrI	CTTAAG	1 cut(s)	506
BfuAI	ACCTGC	2 cut(s)	391, 499
BfuI	GTATCC	1 cut(s)	1852
Bme18I	GGWCC	5 cut(s)	442, 488, 556, 1210, 1658
BmeT110I	CYCGRG	2 cut(s)	227, 2003
BmgBI	CACGTC	1 cut(s)	1544
BmgT120I	GGNCC	8 cut(s)	33, 442, 488, 556, 1210, 1233, 1658, 1759
BmiI	GGNNCC	6 cut(s)	12, 519, 708, 783, 990, 1761
BmrI	ACTGGG	1 cut(s)	1632
BmsI	GCATC	2 cut(s)	292, 1739
BmtI	GCTAGC	1 cut(s)	2271
BmuI	ACTGGG	1 cut(s)	1632
BpiI	GAAGAC	2 cut(s)	575, 1385
BplI	GAGNNNNNCTC	2 cut(s)	528, 560
BpmI	CTGGAG	3 cut(s)	725, 1557, 1704
Bpu10I	CCTNAGC	1 cut(s)	891
Bpu14I	TTCGAA	1 cut(s)	843
BpuEI	CTTGAG	3 cut(s)	605, 1584, 2207
BpuMI	CCSGG	4 cut(s)	36, 1386, 1405, 1449
Bsa29I	ATCGAT	1 cut(s)	1489
BsaBI	GATNNNNATC	1 cut(s)	1495
BsaJI	CCNNGG	4 cut(s)	228, 521, 1193, 1384
BsaWI	WCCGGW	1 cut(s)	1987
BsaXI	ACNNNNNCTCC	2 cut(s)	1530, 1560
Bsc4I	CCNNNNNNNGG	5 cut(s)	290, 964, 1242, 1538, 2191
Bse118I	RCCGGY	1 cut(s)	1987
Bse1I	ACTGG	4 cut(s)	145, 1247, 1627, 2056
Bse21I	CCTNAGG	2 cut(s)	777, 860
Bse3DI	GCAATG	1 cut(s)	1222
Bse8I	GATNNNNATC	1 cut(s)	1495
BseBI	CCWGG	8 cut(s)	786, 833, 1326, 1410, 1422, 1431, 1458, 2273
BseCI	ATCGAT	1 cut(s)	1489
BseDI	CCNNGG	4 cut(s)	228, 521, 1193, 1384
BseGI	GGATG	2 cut(s)	676, 1924
BseJI	GATNNNNATC	1 cut(s)	1495
BseLI	CCNNNNNNNGG	5 cut(s)	290, 964, 1242, 1538, 2191
BseMI	GCAATG	1 cut(s)	1222
BseMII	CTCAG	7 cut(s)	330, 540, 768, 851, 882, 1737, 1920
BseNI	ACTGG	4 cut(s)	145, 1247, 1627, 2056
BseRI	GAGGAG	3 cut(s)	794, 1653, 1916
BseXI	GCAGC	9 cut(s)	103, 199, 211, 1117, 1351, 1373, 1714, 1807, 2218
BseYI	CCCAGC	1 cut(s)	1915
Bsh1236I	CGCG	1 cut(s)	1512
Bsh1285I	CGRYCG	1 cut(s)	2216
BshFI	GGCC	8 cut(s)	34, 51, 263, 460, 1235, 1408, 1760, 2219
BshNI	GGYRCC	1 cut(s)	988
BshTI	ACCGGT	1 cut(s)	1987
BshVI	ATCGAT	1 cut(s)	1489
BsiEI	CGRYCG	1 cut(s)	2216
BsiHKCI	CYCGRG	2 cut(s)	227, 2003
BsiSI	CCGG	5 cut(s)	36, 1386, 1405, 1448, 1988
BslFI	GGGAC	2 cut(s)	306, 2062
BslI	CCNNNNNNNGG	5 cut(s)	290, 964, 1242, 1538, 2191
BsmAI	GTCTC	1 cut(s)	1581
BsmBI	CGTCTC	1 cut(s)	1581
BsmFI	GGGAC	2 cut(s)	306, 2062
BsmI	GAATGC	5 cut(s)	911, 930, 1354, 1431, 1458
BsnI	GGCC	8 cut(s)	34, 51, 263, 460, 1235, 1408, 1760, 2219
BsoBI	CYCGRG	2 cut(s)	227, 2003
Bsp119I	TTCGAA	1 cut(s)	843
Bsp1286I	GDGCHC	3 cut(s)	1385, 1652, 1973
Bsp1407I	TGTACA	1 cut(s)	1003
Bsp143I	GATC	8 cut(s)	10, 187, 280, 368, 745, 1490, 1496, 1560
Bsp19I	CCATGG	1 cut(s)	521
BspACI	CCGC	8 cut(s)	8, 39, 129, 151, 512, 743, 1213, 1231
BspANI	GGCC	8 cut(s)	34, 51, 263, 460, 1235, 1408, 1760, 2219
BspCNI	CTCAG	7 cut(s)	331, 541, 769, 852, 883, 1738, 1921
BspDI	ATCGAT	1 cut(s)	1489
BspFNI	CGCG	1 cut(s)	1512
BspLI	GGNNCC	6 cut(s)	12, 519, 708, 783, 990, 1761
BspMI	ACCTGC	2 cut(s)	391, 499
BspOI	GCTAGC	1 cut(s)	2271
BspPI	GGATC	4 cut(s)	5, 18, 275, 753
BspQI	GCTCTTC	3 cut(s)	529, 1830, 2234
BspT104I	TTCGAA	1 cut(s)	843
BspT107I	GGYRCC	1 cut(s)	988
BspTI	CTTAAG	1 cut(s)	506
BsrDI	GCAATG	1 cut(s)	1222
BsrFI	RCCGGY	1 cut(s)	1987
BsrGI	TGTACA	1 cut(s)	1003
BsrI	ACTGG	4 cut(s)	145, 1247, 1627, 2056
BssAI	RCCGGY	1 cut(s)	1987
BssECI	CCNNGG	4 cut(s)	228, 521, 1193, 1384
BssMI	GATC	8 cut(s)	10, 187, 280, 368, 745, 1490, 1496, 1560
BssNAI	GTATAC	1 cut(s)	584
BssT1I	CCWWGG	1 cut(s)	521
Bst1107I	GTATAC	1 cut(s)	584
Bst2UI	CCWGG	8 cut(s)	786, 833, 1326, 1410, 1422, 1431, 1458, 2273
Bst6I	CTCTTC	8 cut(s)	97, 130, 387, 529, 1053, 1254, 1830, 2234
BstAFI	CTTAAG	1 cut(s)	506
BstAPI	GCANNNNNTGC	1 cut(s)	491
BstAUI	TGTACA	1 cut(s)	1003
BstBI	TTCGAA	1 cut(s)	843
BstC8I	GCNNGC	3 cut(s)	53, 1233, 2269
BstDEI	CTNAG	9 cut(s)	203, 339, 549, 777, 860, 891, 1312, 1746, 1929
BstDSI	CCRYGG	2 cut(s)	521, 1193
BstEII	GGTNACC	1 cut(s)	473
BstENI	CCTNNNNNAGG	1 cut(s)	2189
BstF5I	GGATG	2 cut(s)	676, 1924
BstFNI	CGCG	1 cut(s)	1512
BstH2I	RGCGCY	1 cut(s)	45
BstHHI	GCGC	3 cut(s)	44, 57, 1512
BstKTI	GATC	8 cut(s)	13, 190, 283, 371, 748, 1493, 1499, 1563
BstMAI	GTCTC	1 cut(s)	1581
BstMBI	GATC	8 cut(s)	10, 187, 280, 368, 745, 1490, 1496, 1560
BstMCI	CGRYCG	1 cut(s)	2216
BstNI	CCWGG	8 cut(s)	786, 833, 1326, 1410, 1422, 1431, 1458, 2273
BstNSI	RCATGY	2 cut(s)	1050, 2209
BstPI	GGTNACC	1 cut(s)	473
BstSFI	CTRYAG	1 cut(s)	1716
BstUI	CGCG	1 cut(s)	1512
BstV1I	GCAGC	9 cut(s)	103, 199, 211, 1117, 1351, 1373, 1714, 1807, 2218
BstV2I	GAAGAC	2 cut(s)	575, 1385
BstX2I	RGATCY	2 cut(s)	10, 745
BstYI	RGATCY	2 cut(s)	10, 745
BstZ17I	GTATAC	1 cut(s)	584
Bsu15I	ATCGAT	1 cut(s)	1489
Bsu36I	CCTNAGG	2 cut(s)	777, 860
BsuI	GTATCC	1 cut(s)	1852
BsuRI	GGCC	8 cut(s)	34, 51, 263, 460, 1235, 1408, 1760, 2219
BsuTUI	ATCGAT	1 cut(s)	1489
BtgI	CCRYGG	2 cut(s)	521, 1193
BtgZI	GCGATG	2 cut(s)	1527, 2235
BtrI	CACGTC	1 cut(s)	1544
BtsCI	GGATG	2 cut(s)	676, 1924
BtsI	GCAGTG	1 cut(s)	1612
BtsIMutI	CAGTG	3 cut(s)	579, 1612, 1870
BveI	ACCTGC	2 cut(s)	391, 499
Cac8I	GCNNGC	3 cut(s)	53, 1233, 2269
CaiI	CAGNNNCTG	1 cut(s)	491
CfoI	GCGC	3 cut(s)	44, 57, 1512
Cfr10I	RCCGGY	1 cut(s)	1987
Cfr13I	GGNCC	8 cut(s)	33, 442, 488, 556, 1210, 1233, 1658, 1759
ClaI	ATCGAT	1 cut(s)	1489
CseI	GACGC	2 cut(s)	303, 1310
Csp6I	GTAC	4 cut(s)	1004, 1772, 1808, 2008
CspAI	ACCGGT	1 cut(s)	1987
CviAII	CATG	5 cut(s)	522, 1047, 1207, 1977, 2206
CviQI	GTAC	4 cut(s)	1004, 1772, 1808, 2008
DdeI	CTNAG	9 cut(s)	203, 339, 549, 777, 860, 891, 1312, 1746, 1929
DpnI	GATC	8 cut(s)	12, 189, 282, 370, 747, 1492, 1498, 1562
DpnII	GATC	8 cut(s)	10, 187, 280, 368, 745, 1490, 1496, 1560
DraI	TTTAAA	2 cut(s)	808, 975
DraIII	CACNNNGTG	1 cut(s)	1979
EaeI	YGGCCR	1 cut(s)	2217
Eam1104I	CTCTTC	8 cut(s)	97, 130, 387, 529, 1053, 1254, 1830, 2234
EarI	CTCTTC	8 cut(s)	97, 130, 387, 529, 1053, 1254, 1830, 2234
EciI	GGCGGA	3 cut(s)	23, 118, 527
Eco130I	CCWWGG	1 cut(s)	521
Eco24I	GRGCYC	3 cut(s)	1385, 1652, 1973
Eco47I	GGWCC	5 cut(s)	442, 488, 556, 1210, 1658
Eco57I	CTGAAG	5 cut(s)	78, 260, 411, 950, 1077
Eco81I	CCTNAGG	2 cut(s)	777, 860
Eco88I	CYCGRG	2 cut(s)	227, 2003
Eco91I	GGTNACC	1 cut(s)	473
EcoNI	CCTNNNNNAGG	1 cut(s)	2189
EcoO109I	RGGNCCY	1 cut(s)	488
EcoO65I	GGTNACC	1 cut(s)	473
EcoRII	CCWGG	8 cut(s)	784, 831, 1324, 1408, 1420, 1429, 1456, 2271
EcoT14I	CCWWGG	1 cut(s)	521
EcoT38I	GRGCYC	3 cut(s)	1385, 1652, 1973
ErhI	CCWWGG	1 cut(s)	521
Esp3I	CGTCTC	1 cut(s)	1581
FaeI	CATG	5 cut(s)	525, 1050, 1210, 1980, 2209
FaqI	GGGAC	2 cut(s)	306, 2062
FatI	CATG	5 cut(s)	521, 1046, 1206, 1976, 2205
FauI	CCCGC	1 cut(s)	1224
FbaI	TGATCA	1 cut(s)	1560
FblI	GTMKAC	1 cut(s)	583
FokI	GGATG	2 cut(s)	683, 1911
FriOI	GRGCYC	3 cut(s)	1385, 1652, 1973
FspBI	CTAG	4 cut(s)	183, 944, 1494, 2268
GlaI	GCGC	3 cut(s)	43, 56, 1511
GsaI	CCCAGC	1 cut(s)	1919
GsuI	CTGGAG	3 cut(s)	725, 1557, 1704
HaeII	RGCGCY	1 cut(s)	45
HaeIII	GGCC	8 cut(s)	34, 51, 263, 460, 1235, 1408, 1760, 2219
HapII	CCGG	5 cut(s)	36, 1386, 1405, 1448, 1988
HgaI	GACGC	2 cut(s)	303, 1310
HhaI	GCGC	3 cut(s)	44, 57, 1512
Hin1II	CATG	5 cut(s)	525, 1050, 1210, 1980, 2209
Hin6I	GCGC	3 cut(s)	42, 55, 1510
HinP1I	GCGC	3 cut(s)	42, 55, 1510
HincII	GTYRAC	2 cut(s)	629, 1525
HindII	GTYRAC	2 cut(s)	629, 1525
HpaI	GTTAAC	1 cut(s)	1525
HpaII	CCGG	5 cut(s)	36, 1386, 1405, 1448, 1988
HphI	GGTGA	3 cut(s)	155, 1276, 2135
Hpy166II	GTNNAC	4 cut(s)	584, 629, 1006, 1525
Hpy8I	GTNNAC	4 cut(s)	584, 629, 1006, 1525
HpyAV	CCTTC	9 cut(s)	142, 152, 547, 661, 839, 1156, 1744, 2170, 2185
HpyCH4IV	ACGT	2 cut(s)	1543, 2025
HpyCH4V	TGCA	9 cut(s)	199, 455, 909, 1190, 1331, 1361, 1645, 1730, 1802
HpyF3I	CTNAG	9 cut(s)	203, 339, 549, 777, 860, 891, 1312, 1746, 1929
HpySE526I	ACGT	2 cut(s)	1543, 2025
Hsp92II	CATG	5 cut(s)	525, 1050, 1210, 1980, 2209
HspAI	GCGC	3 cut(s)	42, 55, 1510
Ksp22I	TGATCA	1 cut(s)	1560
KspAI	GTTAAC	1 cut(s)	1525
Kzo9I	GATC	8 cut(s)	10, 187, 280, 368, 745, 1490, 1496, 1560
LguI	GCTCTTC	3 cut(s)	529, 1830, 2234
LmnI	GCTCC	6 cut(s)	499, 706, 781, 892, 1021, 1903
Lsp1109I	GCAGC	9 cut(s)	103, 199, 211, 1117, 1351, 1373, 1714, 1807, 2218
LweI	GCATC	2 cut(s)	292, 1739
MaeI	CTAG	4 cut(s)	183, 944, 1494, 2268
MaeII	ACGT	2 cut(s)	1543, 2025
MaeIII	GTNAC	3 cut(s)	143, 378, 473
MalI	GATC	8 cut(s)	12, 189, 282, 370, 747, 1492, 1498, 1562
MboI	GATC	8 cut(s)	10, 187, 280, 368, 745, 1490, 1496, 1560
MfeI	CAATTG	1 cut(s)	1474
MflI	RGATCY	2 cut(s)	10, 745
MhlI	GDGCHC	3 cut(s)	1385, 1652, 1973
MlyI	GAGTC	2 cut(s)	632, 822
MmeI	TCCRAC	2 cut(s)	38, 2058
MseI	TTAA	9 cut(s)	246, 507, 750, 807, 974, 1524, 1581, 1830, 1938
MslI	CAYNNNNRTG	1 cut(s)	1891
MspA1I	CMGCKG	2 cut(s)	1364, 1727
MspCI	CTTAAG	1 cut(s)	506
MspI	CCGG	5 cut(s)	36, 1386, 1405, 1448, 1988
MunI	CAATTG	1 cut(s)	1474
Mva1269I	GAATGC	5 cut(s)	911, 930, 1354, 1431, 1458
MvaI	CCWGG	8 cut(s)	786, 833, 1326, 1410, 1422, 1431, 1458, 2273
MvnI	CGCG	1 cut(s)	1512
NciI	CCSGG	4 cut(s)	36, 1386, 1405, 1449
NcoI	CCATGG	1 cut(s)	521
NdeII	GATC	8 cut(s)	10, 187, 280, 368, 745, 1490, 1496, 1560
NheI	GCTAGC	1 cut(s)	2267
NlaIII	CATG	5 cut(s)	525, 1050, 1210, 1980, 2209
NlaIV	GGNNCC	6 cut(s)	12, 519, 708, 783, 990, 1761
NmeAIII	GCCGAG	1 cut(s)	289
NmuCI	GTSAC	1 cut(s)	143
NspI	RCATGY	2 cut(s)	1050, 2209
NspV	TTCGAA	1 cut(s)	843
PaeR7I	CTCGAG	1 cut(s)	2003
PciI	ACATGT	1 cut(s)	2205
PciSI	GCTCTTC	3 cut(s)	529, 1830, 2234
PctI	GAATGC	5 cut(s)	911, 930, 1354, 1431, 1458
PfeI	GAWTC	9 cut(s)	66, 86, 645, 1134, 1246, 1466, 1614, 1795, 1873
PflMI	CCANNNNNTGG	1 cut(s)	1242
PinAI	ACCGGT	1 cut(s)	1987
PleI	GAGTC	2 cut(s)	632, 821
PpsI	GAGTC	2 cut(s)	632, 821
PpuMI	RGGWCCY	1 cut(s)	488
PscI	ACATGT	1 cut(s)	2205
Psp1406I	AACGTT	1 cut(s)	2025
Psp5II	RGGWCCY	1 cut(s)	488
Psp6I	CCWGG	8 cut(s)	784, 831, 1324, 1408, 1420, 1429, 1456, 2271
PspEI	GGTNACC	1 cut(s)	473
PspFI	CCCAGC	1 cut(s)	1915
PspGI	CCWGG	8 cut(s)	784, 831, 1324, 1408, 1420, 1429, 1456, 2271
PspN4I	GGNNCC	6 cut(s)	12, 519, 708, 783, 990, 1761
PspPI	GGNCC	8 cut(s)	33, 442, 488, 556, 1210, 1233, 1658, 1759
PspPPI	RGGWCCY	1 cut(s)	488
PstNI	CAGNNNCTG	1 cut(s)	491
PsuI	RGATCY	2 cut(s)	10, 745
PvuII	CAGCTG	2 cut(s)	1364, 1727
RsaI	GTAC	4 cut(s)	1005, 1773, 1809, 2009
RsaNI	GTAC	4 cut(s)	1004, 1772, 1808, 2008
RseI	CAYNNNNRTG	1 cut(s)	1891
SapI	GCTCTTC	3 cut(s)	529, 1830, 2234
SaqAI	TTAA	9 cut(s)	246, 507, 750, 807, 974, 1524, 1581, 1830, 1938
Sau3AI	GATC	8 cut(s)	10, 187, 280, 368, 745, 1490, 1496, 1560
Sau96I	GGNCC	8 cut(s)	33, 442, 488, 556, 1210, 1233, 1658, 1759
SchI	GAGTC	2 cut(s)	632, 822
SduI	GDGCHC	3 cut(s)	1385, 1652, 1973
SfaNI	GCATC	2 cut(s)	292, 1739
SfcI	CTRYAG	1 cut(s)	1716
Sfr274I	CTCGAG	1 cut(s)	2003
SfuI	TTCGAA	1 cut(s)	843
SinI	GGWCC	5 cut(s)	442, 488, 556, 1210, 1658
SlaI	CTCGAG	1 cut(s)	2003
SmiMI	CAYNNNNRTG	1 cut(s)	1891
SmlI	CTYRAG	5 cut(s)	506, 620, 1599, 2003, 2186
SmoI	CTYRAG	5 cut(s)	506, 620, 1599, 2003, 2186
SsiI	CCGC	8 cut(s)	8, 39, 129, 151, 512, 743, 1213, 1231
SspI	AATATT	1 cut(s)	1859
SspMI	CTAG	4 cut(s)	183, 944, 1494, 2268
StyI	CCWWGG	1 cut(s)	521
TaiI	ACGT	2 cut(s)	1546, 2028
TaqII	GACCGA	1 cut(s)	2202
TatI	WGTACW	1 cut(s)	1003
TauI	GCSGC	1 cut(s)	42
TfiI	GAWTC	9 cut(s)	66, 86, 645, 1134, 1246, 1466, 1614, 1795, 1873
Tru1I	TTAA	9 cut(s)	246, 507, 750, 807, 974, 1524, 1581, 1830, 1938
Tru9I	TTAA	9 cut(s)	246, 507, 750, 807, 974, 1524, 1581, 1830, 1938
TscAI	CASTG	3 cut(s)	579, 1612, 1870
TseFI	GTSAC	1 cut(s)	143
TseI	GCWGC	9 cut(s)	116, 199, 212, 1105, 1361, 1364, 1727, 1820, 2231
Tsp45I	GTSAC	1 cut(s)	143
TspDTI	ATGAA	3 cut(s)	1195, 1280, 2252
TspRI	CASTG	3 cut(s)	579, 1612, 1870
Van91I	CCANNNNNTGG	1 cut(s)	1242
Vha464I	CTTAAG	1 cut(s)	506
VpaK11BI	GGWCC	5 cut(s)	442, 488, 556, 1210, 1658
XagI	CCTNNNNNAGG	1 cut(s)	2189
XapI	RAATTY	5 cut(s)	465, 1287, 1589, 1813, 2283
XbaI	TCTAGA	1 cut(s)	1493
XceI	RCATGY	2 cut(s)	1050, 2209
XhoI	CTCGAG	1 cut(s)	2003
XmiI	GTMKAC	1 cut(s)	583
XspI	CTAG	4 cut(s)	183, 944, 1494, 2268

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.