Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0003545

Physical Location & Seq

Genomic Coordinates Forward (+)

59807231 .. 59811254

Gene Structure 4024 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG413000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2310 bp

ATGACGGCGGATCCGACTGTGATAAGTTTGAGGCCCGGCGGCGCTATTGGCCTGCGCGCCCCACGATTCCTCACACCTCGCCTCGATTCCTCTTCAGAGCCTCAATCCTCCAATGCTGCTCTCTCTTCCGCCTTCAAGACTGGTGACTTGCGGTTTGAAGGTCGTGAGCGTGTTCGATATACTAGAGATCAGCTAATGCAGCTTAGAGAGGCTGCCACTACTATCCCCGAGGGTATTTTGAAGATTAAACAAGAAATAGAGGCCGAGTTTGGTGGAGATGATCCTACTTGGGGACGCACAGATGCCAATCCACAGCCTCAATCGCAAGGTCGTTATACCGAGTTAGATAACCGTGATTGGCGTGGTCGATCTGGACAGTTACCTGCTTCTGAAGAGGAAAGAAATGATTTTTCAAGGCGACAGGGATTGAATAACCAGCAGGACCAACAATTTGCAAGGCCACAAATTTCTGGTAACCAAGTGGCAGGACCTGCTCCTGTTCTTCTTAAGGCGGAGGTTCCATGGTCAGCTCGAAGAGCAAATCTCTCTGAGAAGGACCGTGTATTGAAGACAGTGAAAGGTATACTGAACAAATTGACCCCAGAGAAGTTTGATGTTCTCAAGGGTCAACTAATTGACTCTGGAATCACAAATCCAGATATTTTGAAGGATGTTATCTTTCTGATATTTGATAAGGCTGTGCTGGAGCCAACATTTTGTCCGATGTATGCCCTTTTATGTGCGGATCTTAATGCGAAACTTCCTCCTTTTCCACCTGAGGAGCCTGGTGGGAAAGAAATCACTTTTAAACGAGTCCTGTTGAATAACTGCCAGGAGGCTTTCGAAGGTGCTGACAACCTGAGGGCAGAAATTAGGCAGATGACTGCTCCTGAGCAAGAAATGGAATGCAGAGATAAAGAACGAATGCTTAAGTTGCGAACTCTAGGAAACATACGCCTTATTGGGGAACTTTTAAAGCAGAAGATGGTGCCTGAAAAGATTGTACACCATATTGTTCAGGAGCTTCTGGGATATGATGGAAAAACATGCCCTGCTGAAGAGAATGTAGAGGCAATATGTCAGTTTTTCAACACCATTGGTAAGCAGCTTGATGAGAGCCAAAAATCTCGCCGAATCAACGATACCTATTTCAGTAGGTTGAAGGAACTGACTACAAACTCCCAACTTGCACCACGGTTGAGGTTCATGGTCCGCAATGTTCTTGATATGCGGGCCAACAACTGGATTCCAAGACGGGAAGAGGTGAAAGCAAAGACTATAACTGAAATTCATTCAGAAGCAGAAAAGAACTTAGGGTTGCGTCCAGGTGCAACGGCAACGATAAGGAATGCTCGTATTGCAGCTGCCTCTGGGGATTTGAGCCCCGGAGGTCTTCCTGCTACCCGGCCTGGCTATATGCCTGGAATGCCTGGGAGCAGGAAAATGCCGGGAATGCCTGGACTTGATTCTGACAATTGGGAGGTTTATCGATCTAGATCAATGACCAAGCGCGATGGTTTGGTTAACTCTCCATCTGGAGGACGTGTCCAGCCACCGTTGATCAGCAAAGCACCGTCTCTTAATTCAAAATTTTTACCTCAAGGCAGTGGTGGAATCATAACTGGGAAAACAAGTGCCTTGTTGCAGGGCTCTGGTGGTCCTCGAACTAATTTGATTTCTGGAGTTGAACCTCTTACTCAAAACGCCAAGCCTACAGTTCCAGCTGCATCATCAGTTTCTTCTGAGAAGGCTCTGGCCCCTGAAATTGTACCGACTTCTGCTAAACCTCTGATTCCTGCAACAGTACCAAATTCTGCTGCTCTTCTTAAAAAAACTGTATCCCTGCTGGAAGAATATTTCAGTGTTCGGATTCTCGACGAGGCACTTCAATGTGTGGAGGAGCTGAAAGCCCCAGCCTACCATCCGGAGTTTGTTAAAGAAGCTATTGCTCTTGCTCTGGATAAGAGCCCACCATGTGTAGAACCGGTCATAAAACTTCTCGAGTACCTGTTCAGTAAAAACGTTTTGACATCGAGAGATATAGGGACTGGTTGCCTTTTATATGGGTCAATGTTGGACGAAATCGGCATTGATTTGCCGAAAGCACCAAATAATTTTGGTGAGATTATTGGGAAGTTGGCTCTGGCAGGGGCATTGGACTTCAAGGTTGTGAAGGAAATCCTTGAGAAGGTGGAAGATGACATGTATCGGTCGGCCATTTTTGGTGCTGCTATGAAGAGCTTTACATCGCAAGATTTTTTGGCTAGCCAGGAAACTGAAATTCAGGCGTGTAAAAGTTTGCTTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03013 ko05416 map03013 map05416

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

769

Amino Acids

84.57

Weight (kDa)

8.33

Isoelectric Point (pI)

52.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIF4G	PF02854	189 - 414	4.5e-54	MIF4G domain
MA3	PF02847	610 - 720	2.7e-25	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003545)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57870 AT5G57870
fragaria_vesca	FvH4_1g00720 FvH4_1g00720 FvH4_2g41200
malus_domestica	MD02G1005900.v1.1 MD02G1006000.v1.1 MD08G1055400.v1.1 MD15G1150600.v1.1
prunus_persica	Prupe.1G395100_v2.0.a1 Prupe.7G265100_v2.0.a1
pyrus_communis	pycom02g00490 pycom08g04550 pycom14g07580 pycom15g13480
rosa_chinensis	RchiOBHm_Chr2g0085441 RchiOBHm_Chr6g0299311
rosa_laevigata	RLG00000011443 RLG00000015688
rosa_multiflora	Rmu_sc0007908.1_g000012 Rmu_ssc0000374.1_g000005
rosa_roxburghii	Rroxscaffold_2G00155380 Rroxscaffold_7G00168790
rosa_rugosa	Rorug01G0460400 Rorug06G0287100
rosa_samantha	Rh2AG008600 Rh2BG009900 Rh2CG010400 Rh2DG010800 Rh6AG398600 Rh6BG407000 Rh6CG413000 Rh6DG399800
rosa_wichuraiana	Rw2G000830 Rw6G034890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	391, 499
AccB1I	GGYRCC	1 cut(s)	988
AccB7I	CCANNNNNTGG	1 cut(s)	1242
AccI	GTMKAC	1 cut(s)	583
AccII	CGCG	2 cut(s)	57, 1512
AccIII	TCCGGA	1 cut(s)	1924
AciI	CCGC	8 cut(s)	8, 39, 129, 151, 512, 743, 1213, 1231
AclI	AACGTT	1 cut(s)	2022
AclWI	GGATC	4 cut(s)	5, 18, 275, 753
AcoI	YGGCCR	1 cut(s)	2214
AcsI	RAATTY	5 cut(s)	465, 1287, 1589, 1810, 2280
AcuI	CTGAAG	3 cut(s)	78, 411, 1077
AdeI	CACNNNGTG	1 cut(s)	1976
AfaI	GTAC	4 cut(s)	1005, 1770, 1806, 2006
AfiI	CCNNNNNNNGG	5 cut(s)	290, 964, 1242, 1538, 2188
AflII	CTTAAG	2 cut(s)	506, 929
AflIII	ACRYGT	2 cut(s)	1543, 2202
AgeI	ACCGGT	1 cut(s)	1984
AjiI	CACGTC	1 cut(s)	1544
AjnI	CCWGG	8 cut(s)	784, 831, 1324, 1408, 1420, 1429, 1456, 2268
Alw26I	GTCTC	1 cut(s)	1581
AlwI	GGATC	4 cut(s)	5, 18, 275, 753
AlwNI	CAGNNNCTG	1 cut(s)	491
Ama87I	CYCGRG	2 cut(s)	227, 2000
Aor13HI	TCCGGA	1 cut(s)	1924
AoxI	GGCC	8 cut(s)	32, 49, 261, 458, 1233, 1406, 1755, 2214
ApeKI	GCWGC	9 cut(s)	116, 199, 212, 1105, 1361, 1364, 1724, 1817, 2228
ApoI	RAATTY	5 cut(s)	465, 1287, 1589, 1810, 2280
ArsI	GACNNNNNNTTYG	4 cut(s)	137, 169, 434, 466
AsiGI	ACCGGT	1 cut(s)	1984
AspLEI	GCGC	4 cut(s)	44, 57, 59, 1512
AspS9I	GGNCC	8 cut(s)	33, 442, 488, 556, 1210, 1233, 1658, 1756
AsuC2I	CCSGG	4 cut(s)	36, 1386, 1405, 1449
AsuHPI	GGTGA	3 cut(s)	155, 1276, 2132
AsuII	TTCGAA	1 cut(s)	843
AsuNHI	GCTAGC	1 cut(s)	2264
AvaI	CYCGRG	2 cut(s)	227, 2000
AvaII	GGWCC	5 cut(s)	442, 488, 556, 1210, 1658
AxyI	CCTNAGG	2 cut(s)	777, 860
BamHI	GGATCC	1 cut(s)	10
BanI	GGYRCC	1 cut(s)	988
BanII	GRGCYC	3 cut(s)	1385, 1652, 1970
BbsI	GAAGAC	2 cut(s)	575, 1385
BbvI	GCAGC	9 cut(s)	103, 199, 211, 1117, 1351, 1373, 1711, 1804, 2215
BccI	CCATC	5 cut(s)	979, 1031, 1508, 1540, 1929
BceAI	ACGGC	2 cut(s)	21, 1350
BciT130I	CCWGG	8 cut(s)	786, 833, 1326, 1410, 1422, 1431, 1458, 2270
BciVI	GTATCC	1 cut(s)	1849
BclI	TGATCA	1 cut(s)	1560
BcnI	CCSGG	4 cut(s)	36, 1386, 1405, 1449
BcoDI	GTCTC	1 cut(s)	1581
BfaI	CTAG	4 cut(s)	183, 944, 1494, 2265
BfmI	CTRYAG	1 cut(s)	1713
BfoI	RGCGCY	1 cut(s)	45
BfrI	CTTAAG	2 cut(s)	506, 929
BfuAI	ACCTGC	2 cut(s)	391, 499
BfuI	GTATCC	1 cut(s)	1849
Bme18I	GGWCC	5 cut(s)	442, 488, 556, 1210, 1658
BmeT110I	CYCGRG	2 cut(s)	227, 2000
BmgBI	CACGTC	1 cut(s)	1544
BmgT120I	GGNCC	8 cut(s)	33, 442, 488, 556, 1210, 1233, 1658, 1756
BmiI	GGNNCC	6 cut(s)	12, 519, 708, 783, 990, 1758
BmrI	ACTGGG	1 cut(s)	1632
BmsI	GCATC	2 cut(s)	292, 1736
BmtI	GCTAGC	1 cut(s)	2268
BmuI	ACTGGG	1 cut(s)	1632
BpiI	GAAGAC	2 cut(s)	575, 1385
BplI	GAGNNNNNCTC	2 cut(s)	528, 560
BpmI	CTGGAG	3 cut(s)	725, 1557, 1701
Bpu10I	CCTNAGC	1 cut(s)	891
Bpu14I	TTCGAA	1 cut(s)	843
BpuEI	CTTGAG	3 cut(s)	605, 1584, 2204
BpuMI	CCSGG	4 cut(s)	36, 1386, 1405, 1449
Bsa29I	ATCGAT	1 cut(s)	1489
BsaBI	GATNNNNATC	2 cut(s)	306, 1495
BsaJI	CCNNGG	5 cut(s)	228, 521, 1193, 1384, 1430
BsaWI	WCCGGW	2 cut(s)	1924, 1984
BsaXI	ACNNNNNCTCC	2 cut(s)	1530, 1560
Bsc4I	CCNNNNNNNGG	5 cut(s)	290, 964, 1242, 1538, 2188
Bse118I	RCCGGY	1 cut(s)	1984
Bse1I	ACTGG	4 cut(s)	145, 1247, 1627, 2053
Bse21I	CCTNAGG	2 cut(s)	777, 860
Bse3DI	GCAATG	1 cut(s)	1222
Bse8I	GATNNNNATC	2 cut(s)	306, 1495
BseAI	TCCGGA	1 cut(s)	1924
BseBI	CCWGG	8 cut(s)	786, 833, 1326, 1410, 1422, 1431, 1458, 2270
BseCI	ATCGAT	1 cut(s)	1489
BseDI	CCNNGG	5 cut(s)	228, 521, 1193, 1384, 1430
BseGI	GGATG	2 cut(s)	676, 1921
BseJI	GATNNNNATC	2 cut(s)	306, 1495
BseLI	CCNNNNNNNGG	5 cut(s)	290, 964, 1242, 1538, 2188
BseMI	GCAATG	1 cut(s)	1222
BseMII	CTCAG	5 cut(s)	540, 768, 851, 882, 1734
BseNI	ACTGG	4 cut(s)	145, 1247, 1627, 2053
BsePI	GCGCGC	1 cut(s)	55
BseRI	GAGGAG	2 cut(s)	794, 1913
BseXI	GCAGC	9 cut(s)	103, 199, 211, 1117, 1351, 1373, 1711, 1804, 2215
BseYI	CCCAGC	1 cut(s)	1912
Bsh1236I	CGCG	2 cut(s)	57, 1512
Bsh1285I	CGRYCG	1 cut(s)	2213
BshFI	GGCC	8 cut(s)	34, 51, 263, 460, 1235, 1408, 1757, 2216
BshNI	GGYRCC	1 cut(s)	988
BshTI	ACCGGT	1 cut(s)	1984
BshVI	ATCGAT	1 cut(s)	1489
BsiEI	CGRYCG	1 cut(s)	2213
BsiHKCI	CYCGRG	2 cut(s)	227, 2000
BsiSI	CCGG	6 cut(s)	36, 1386, 1405, 1448, 1925, 1985
BslFI	GGGAC	2 cut(s)	306, 2059
BslI	CCNNNNNNNGG	5 cut(s)	290, 964, 1242, 1538, 2188
BsmAI	GTCTC	1 cut(s)	1581
BsmBI	CGTCTC	1 cut(s)	1581
BsmFI	GGGAC	2 cut(s)	306, 2059
BsmI	GAATGC	5 cut(s)	911, 930, 1354, 1431, 1458
BsnI	GGCC	8 cut(s)	34, 51, 263, 460, 1235, 1408, 1757, 2216
BsoBI	CYCGRG	2 cut(s)	227, 2000
Bsp119I	TTCGAA	1 cut(s)	843
Bsp1286I	GDGCHC	3 cut(s)	1385, 1652, 1970
Bsp13I	TCCGGA	1 cut(s)	1924
Bsp1407I	TGTACA	1 cut(s)	1003
Bsp143I	GATC	8 cut(s)	10, 187, 280, 368, 745, 1490, 1496, 1560
Bsp19I	CCATGG	1 cut(s)	521
BspACI	CCGC	8 cut(s)	8, 39, 129, 151, 512, 743, 1213, 1231
BspANI	GGCC	8 cut(s)	34, 51, 263, 460, 1235, 1408, 1757, 2216
BspCNI	CTCAG	5 cut(s)	541, 769, 852, 883, 1735
BspDI	ATCGAT	1 cut(s)	1489
BspEI	TCCGGA	1 cut(s)	1924
BspFNI	CGCG	2 cut(s)	57, 1512
BspLI	GGNNCC	6 cut(s)	12, 519, 708, 783, 990, 1758
BspMI	ACCTGC	2 cut(s)	391, 499
BspOI	GCTAGC	1 cut(s)	2268
BspPI	GGATC	4 cut(s)	5, 18, 275, 753
BspQI	GCTCTTC	3 cut(s)	529, 1827, 2231
BspT104I	TTCGAA	1 cut(s)	843
BspT107I	GGYRCC	1 cut(s)	988
BspTI	CTTAAG	2 cut(s)	506, 929
BsrDI	GCAATG	1 cut(s)	1222
BsrFI	RCCGGY	1 cut(s)	1984
BsrGI	TGTACA	1 cut(s)	1003
BsrI	ACTGG	4 cut(s)	145, 1247, 1627, 2053
BssAI	RCCGGY	1 cut(s)	1984
BssECI	CCNNGG	5 cut(s)	228, 521, 1193, 1384, 1430
BssHII	GCGCGC	1 cut(s)	55
BssMI	GATC	8 cut(s)	10, 187, 280, 368, 745, 1490, 1496, 1560
BssNAI	GTATAC	1 cut(s)	584
BssT1I	CCWWGG	1 cut(s)	521
Bst1107I	GTATAC	1 cut(s)	584
Bst2UI	CCWGG	8 cut(s)	786, 833, 1326, 1410, 1422, 1431, 1458, 2270
Bst6I	CTCTTC	8 cut(s)	97, 130, 387, 529, 1053, 1254, 1827, 2231
BstAFI	CTTAAG	2 cut(s)	506, 929
BstAPI	GCANNNNNTGC	1 cut(s)	491
BstAUI	TGTACA	1 cut(s)	1003
BstBI	TTCGAA	1 cut(s)	843
BstC8I	GCNNGC	4 cut(s)	53, 57, 1233, 2266
BstDEI	CTNAG	7 cut(s)	203, 549, 777, 860, 891, 1312, 1743
BstDSI	CCRYGG	2 cut(s)	521, 1193
BstEII	GGTNACC	1 cut(s)	473
BstENI	CCTNNNNNAGG	1 cut(s)	2186
BstF5I	GGATG	2 cut(s)	676, 1921
BstFNI	CGCG	2 cut(s)	57, 1512
BstH2I	RGCGCY	1 cut(s)	45
BstHHI	GCGC	4 cut(s)	44, 57, 59, 1512
BstKTI	GATC	8 cut(s)	13, 190, 283, 371, 748, 1493, 1499, 1563
BstMAI	GTCTC	1 cut(s)	1581
BstMBI	GATC	8 cut(s)	10, 187, 280, 368, 745, 1490, 1496, 1560
BstMCI	CGRYCG	1 cut(s)	2213
BstMWI	GCNNNNNNNGC	9 cut(s)	48, 199, 322, 491, 536, 934, 1358, 1426, 1453
BstNI	CCWGG	8 cut(s)	786, 833, 1326, 1410, 1422, 1431, 1458, 2270
BstNSI	RCATGY	2 cut(s)	1050, 2206
BstPI	GGTNACC	1 cut(s)	473
BstSFI	CTRYAG	1 cut(s)	1713
BstUI	CGCG	2 cut(s)	57, 1512
BstV1I	GCAGC	9 cut(s)	103, 199, 211, 1117, 1351, 1373, 1711, 1804, 2215
BstV2I	GAAGAC	2 cut(s)	575, 1385
BstX2I	RGATCY	2 cut(s)	10, 745
BstYI	RGATCY	2 cut(s)	10, 745
BstZ17I	GTATAC	1 cut(s)	584
Bsu15I	ATCGAT	1 cut(s)	1489
Bsu36I	CCTNAGG	2 cut(s)	777, 860
BsuI	GTATCC	1 cut(s)	1849
BsuRI	GGCC	8 cut(s)	34, 51, 263, 460, 1235, 1408, 1757, 2216
BsuTUI	ATCGAT	1 cut(s)	1489
BtgI	CCRYGG	2 cut(s)	521, 1193
BtgZI	GCGATG	2 cut(s)	1527, 2232
BtrI	CACGTC	1 cut(s)	1544
BtsCI	GGATG	2 cut(s)	676, 1921
BtsI	GCAGTG	1 cut(s)	1612
BtsIMutI	CAGTG	3 cut(s)	579, 1612, 1867
BveI	ACCTGC	2 cut(s)	391, 499
Cac8I	GCNNGC	4 cut(s)	53, 57, 1233, 2266
CaiI	CAGNNNCTG	1 cut(s)	491
CfoI	GCGC	4 cut(s)	44, 57, 59, 1512
Cfr10I	RCCGGY	1 cut(s)	1984
Cfr13I	GGNCC	8 cut(s)	33, 442, 488, 556, 1210, 1233, 1658, 1756
ClaI	ATCGAT	1 cut(s)	1489
CseI	GACGC	2 cut(s)	303, 1310
Csp6I	GTAC	4 cut(s)	1004, 1769, 1805, 2005
CspAI	ACCGGT	1 cut(s)	1984
CviAII	CATG	5 cut(s)	522, 1047, 1207, 1974, 2203
CviQI	GTAC	4 cut(s)	1004, 1769, 1805, 2005
DdeI	CTNAG	7 cut(s)	203, 549, 777, 860, 891, 1312, 1743
DpnI	GATC	8 cut(s)	12, 189, 282, 370, 747, 1492, 1498, 1562
DpnII	GATC	8 cut(s)	10, 187, 280, 368, 745, 1490, 1496, 1560
DraI	TTTAAA	2 cut(s)	808, 975
DraIII	CACNNNGTG	1 cut(s)	1976
EaeI	YGGCCR	1 cut(s)	2214
Eam1104I	CTCTTC	8 cut(s)	97, 130, 387, 529, 1053, 1254, 1827, 2231
EarI	CTCTTC	8 cut(s)	97, 130, 387, 529, 1053, 1254, 1827, 2231
EciI	GGCGGA	3 cut(s)	23, 118, 527
Eco130I	CCWWGG	1 cut(s)	521
Eco24I	GRGCYC	3 cut(s)	1385, 1652, 1970
Eco47I	GGWCC	5 cut(s)	442, 488, 556, 1210, 1658
Eco57I	CTGAAG	3 cut(s)	78, 411, 1077
Eco81I	CCTNAGG	2 cut(s)	777, 860
Eco88I	CYCGRG	2 cut(s)	227, 2000
Eco91I	GGTNACC	1 cut(s)	473
EcoNI	CCTNNNNNAGG	1 cut(s)	2186
EcoO109I	RGGNCCY	1 cut(s)	488
EcoO65I	GGTNACC	1 cut(s)	473
EcoRII	CCWGG	8 cut(s)	784, 831, 1324, 1408, 1420, 1429, 1456, 2268
EcoT14I	CCWWGG	1 cut(s)	521
EcoT38I	GRGCYC	3 cut(s)	1385, 1652, 1970
ErhI	CCWWGG	1 cut(s)	521
Esp3I	CGTCTC	1 cut(s)	1581
FaeI	CATG	5 cut(s)	525, 1050, 1210, 1977, 2206
FaqI	GGGAC	2 cut(s)	306, 2059
FatI	CATG	5 cut(s)	521, 1046, 1206, 1973, 2202
FauI	CCCGC	1 cut(s)	1224
FbaI	TGATCA	1 cut(s)	1560
FblI	GTMKAC	1 cut(s)	583
FokI	GGATG	2 cut(s)	683, 1908
FriOI	GRGCYC	3 cut(s)	1385, 1652, 1970
FspBI	CTAG	4 cut(s)	183, 944, 1494, 2265
GlaI	GCGC	4 cut(s)	43, 56, 58, 1511
GsaI	CCCAGC	1 cut(s)	1916
GsuI	CTGGAG	3 cut(s)	725, 1557, 1701
HaeII	RGCGCY	1 cut(s)	45
HaeIII	GGCC	8 cut(s)	34, 51, 263, 460, 1235, 1408, 1757, 2216
HapII	CCGG	6 cut(s)	36, 1386, 1405, 1448, 1925, 1985
HgaI	GACGC	2 cut(s)	303, 1310
HhaI	GCGC	4 cut(s)	44, 57, 59, 1512
Hin1II	CATG	5 cut(s)	525, 1050, 1210, 1977, 2206
Hin6I	GCGC	4 cut(s)	42, 55, 57, 1510
HinP1I	GCGC	4 cut(s)	42, 55, 57, 1510
HincII	GTYRAC	2 cut(s)	629, 1525
HindII	GTYRAC	2 cut(s)	629, 1525
HpaI	GTTAAC	1 cut(s)	1525
HpaII	CCGG	6 cut(s)	36, 1386, 1405, 1448, 1925, 1985
HphI	GGTGA	3 cut(s)	155, 1276, 2132
Hpy166II	GTNNAC	4 cut(s)	584, 629, 1006, 1525
Hpy8I	GTNNAC	4 cut(s)	584, 629, 1006, 1525
Hpy99I	CGWCG	1 cut(s)	1880
HpyAV	CCTTC	9 cut(s)	142, 152, 547, 661, 839, 1156, 1741, 2167, 2182
HpyCH4IV	ACGT	2 cut(s)	1543, 2022
HpyCH4V	TGCA	9 cut(s)	199, 455, 909, 1190, 1331, 1361, 1645, 1727, 1799
HpyF10VI	GCNNNNNNNGC	9 cut(s)	48, 199, 322, 491, 536, 934, 1358, 1426, 1453
HpyF3I	CTNAG	7 cut(s)	203, 549, 777, 860, 891, 1312, 1743
HpySE526I	ACGT	2 cut(s)	1543, 2022
Hsp92II	CATG	5 cut(s)	525, 1050, 1210, 1977, 2206
HspAI	GCGC	4 cut(s)	42, 55, 57, 1510
Kpn2I	TCCGGA	1 cut(s)	1924
Ksp22I	TGATCA	1 cut(s)	1560
KspAI	GTTAAC	1 cut(s)	1525
Kzo9I	GATC	8 cut(s)	10, 187, 280, 368, 745, 1490, 1496, 1560
LguI	GCTCTTC	3 cut(s)	529, 1827, 2231
LmnI	GCTCC	7 cut(s)	499, 706, 781, 892, 1021, 1434, 1900
Lsp1109I	GCAGC	9 cut(s)	103, 199, 211, 1117, 1351, 1373, 1711, 1804, 2215
LweI	GCATC	2 cut(s)	292, 1736
MaeI	CTAG	4 cut(s)	183, 944, 1494, 2265
MaeII	ACGT	2 cut(s)	1543, 2022
MaeIII	GTNAC	3 cut(s)	143, 378, 473
MalI	GATC	8 cut(s)	12, 189, 282, 370, 747, 1492, 1498, 1562
MboI	GATC	8 cut(s)	10, 187, 280, 368, 745, 1490, 1496, 1560
MfeI	CAATTG	1 cut(s)	1474
MflI	RGATCY	2 cut(s)	10, 745
MhlI	GDGCHC	3 cut(s)	1385, 1652, 1970
MlyI	GAGTC	2 cut(s)	632, 822
MmeI	TCCRAC	2 cut(s)	38, 2055
MroI	TCCGGA	1 cut(s)	1924
MslI	CAYNNNNRTG	1 cut(s)	1888
MspA1I	CMGCKG	2 cut(s)	1364, 1724
MspCI	CTTAAG	2 cut(s)	506, 929
MspI	CCGG	6 cut(s)	36, 1386, 1405, 1448, 1925, 1985
MunI	CAATTG	1 cut(s)	1474
Mva1269I	GAATGC	5 cut(s)	911, 930, 1354, 1431, 1458
MvaI	CCWGG	8 cut(s)	786, 833, 1326, 1410, 1422, 1431, 1458, 2270
MvnI	CGCG	2 cut(s)	57, 1512
MwoI	GCNNNNNNNGC	9 cut(s)	48, 199, 322, 491, 536, 934, 1358, 1426, 1453
NciI	CCSGG	4 cut(s)	36, 1386, 1405, 1449
NcoI	CCATGG	1 cut(s)	521
NdeII	GATC	8 cut(s)	10, 187, 280, 368, 745, 1490, 1496, 1560
NheI	GCTAGC	1 cut(s)	2264
NlaIII	CATG	5 cut(s)	525, 1050, 1210, 1977, 2206
NlaIV	GGNNCC	6 cut(s)	12, 519, 708, 783, 990, 1758
NmeAIII	GCCGAG	1 cut(s)	289
NmuCI	GTSAC	1 cut(s)	143
NspI	RCATGY	2 cut(s)	1050, 2206
NspV	TTCGAA	1 cut(s)	843
PaeR7I	CTCGAG	1 cut(s)	2000
PauI	GCGCGC	1 cut(s)	55
PciI	ACATGT	1 cut(s)	2202
PciSI	GCTCTTC	3 cut(s)	529, 1827, 2231
PcsI	WCGNNNNNNNCGW	1 cut(s)	11
PctI	GAATGC	5 cut(s)	911, 930, 1354, 1431, 1458
PfeI	GAWTC	9 cut(s)	66, 86, 645, 1134, 1246, 1466, 1614, 1792, 1870
PflMI	CCANNNNNTGG	1 cut(s)	1242
PinAI	ACCGGT	1 cut(s)	1984
PleI	GAGTC	2 cut(s)	632, 821
PpsI	GAGTC	2 cut(s)	632, 821
PpuMI	RGGWCCY	1 cut(s)	488
PscI	ACATGT	1 cut(s)	2202
Psp1406I	AACGTT	1 cut(s)	2022
Psp5II	RGGWCCY	1 cut(s)	488
Psp6I	CCWGG	8 cut(s)	784, 831, 1324, 1408, 1420, 1429, 1456, 2268
PspEI	GGTNACC	1 cut(s)	473
PspFI	CCCAGC	1 cut(s)	1912
PspGI	CCWGG	8 cut(s)	784, 831, 1324, 1408, 1420, 1429, 1456, 2268
PspN4I	GGNNCC	6 cut(s)	12, 519, 708, 783, 990, 1758
PspPI	GGNCC	8 cut(s)	33, 442, 488, 556, 1210, 1233, 1658, 1756
PspPPI	RGGWCCY	1 cut(s)	488
PstNI	CAGNNNCTG	1 cut(s)	491
PsuI	RGATCY	2 cut(s)	10, 745
PteI	GCGCGC	1 cut(s)	55
PvuII	CAGCTG	2 cut(s)	1364, 1724
RsaI	GTAC	4 cut(s)	1005, 1770, 1806, 2006
RsaNI	GTAC	4 cut(s)	1004, 1769, 1805, 2005
RseI	CAYNNNNRTG	1 cut(s)	1888
SapI	GCTCTTC	3 cut(s)	529, 1827, 2231
Sau3AI	GATC	8 cut(s)	10, 187, 280, 368, 745, 1490, 1496, 1560
Sau96I	GGNCC	8 cut(s)	33, 442, 488, 556, 1210, 1233, 1658, 1756
SchI	GAGTC	2 cut(s)	632, 822
SduI	GDGCHC	3 cut(s)	1385, 1652, 1970
SfaNI	GCATC	2 cut(s)	292, 1736
SfcI	CTRYAG	1 cut(s)	1713
Sfr274I	CTCGAG	1 cut(s)	2000
SfuI	TTCGAA	1 cut(s)	843
SinI	GGWCC	5 cut(s)	442, 488, 556, 1210, 1658
SlaI	CTCGAG	1 cut(s)	2000
SmiMI	CAYNNNNRTG	1 cut(s)	1888
SmlI	CTYRAG	6 cut(s)	506, 620, 929, 1599, 2000, 2183
SmoI	CTYRAG	6 cut(s)	506, 620, 929, 1599, 2000, 2183
SsiI	CCGC	8 cut(s)	8, 39, 129, 151, 512, 743, 1213, 1231
SspI	AATATT	1 cut(s)	1856
SspMI	CTAG	4 cut(s)	183, 944, 1494, 2265
StyI	CCWWGG	1 cut(s)	521
TaiI	ACGT	2 cut(s)	1546, 2025
TaqII	GACCGA	1 cut(s)	2199
TatI	WGTACW	1 cut(s)	1003
TauI	GCSGC	1 cut(s)	42
TfiI	GAWTC	9 cut(s)	66, 86, 645, 1134, 1246, 1466, 1614, 1792, 1870
TscAI	CASTG	3 cut(s)	579, 1612, 1867
TseFI	GTSAC	1 cut(s)	143
TseI	GCWGC	9 cut(s)	116, 199, 212, 1105, 1361, 1364, 1724, 1817, 2228
Tsp45I	GTSAC	1 cut(s)	143
TspDTI	ATGAA	3 cut(s)	1195, 1280, 2249
TspRI	CASTG	3 cut(s)	579, 1612, 1867
Van91I	CCANNNNNTGG	1 cut(s)	1242
Vha464I	CTTAAG	2 cut(s)	506, 929
VpaK11BI	GGWCC	5 cut(s)	442, 488, 556, 1210, 1658
XagI	CCTNNNNNAGG	1 cut(s)	2186
XapI	RAATTY	5 cut(s)	465, 1287, 1589, 1810, 2280
XbaI	TCTAGA	1 cut(s)	1493
XceI	RCATGY	2 cut(s)	1050, 2206
XhoI	CTCGAG	1 cut(s)	2000
XmiI	GTMKAC	1 cut(s)	583
XspI	CTAG	4 cut(s)	183, 944, 1494, 2265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.