Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0003545

Physical Location & Seq

Genomic Coordinates Forward (+)

11109810 .. 11114777

Gene Structure 4968 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1150600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2445 bp

ATGCAGCAGGGTGATCAACCGGTGTTGAGCTTGAGACCTGGTGGCGGTCGCGGTAGCGGTAGACTCCTTGGTCCTCGCTTCGACTCCTCCTCCTCCGCCGCTTCCGGCCCGTCTTCTTCGTCGTCGTCGTCGTCGTCTTTGGCTTTCGGTTCCTTTTCTTCTGATCTCCCTCTTCTCCGTCCCCATGGCGGCGCTCCCCCCAATTTCTCTATCAAGGCTGGAGACGCACGGTTCGAGGGTCGTGAGCGAGTGAAATACACCAGAGACCAGATCCTACAGCTTAGAGAGGCTGTTGTGCTCCCTGATGAAATTCTAAAAGTGAAACAAGAAGTTGAAGCTGAATTTTTCAGTGGTGAAGATCAGAGCTGGGGTCGTGCAGAAACCAATCTGCCAGCTCAATCTCCAACTCCATCTCCAGCTCAAAATCGTTATTCGGAGCCTGACAGCCGGGATTGGCGTGGCCGTTCTGCACCAGTTCCTGCCTCTGGAGAGGAACGGTCTTGGGATACTCTTCGGGAGAATAAAGAGTCTGGTAATCGGTTTGATTACAGACAGCAAGATGCAAATCAGGCTCAATTTGCGAGGACACTGAACCAAGGGGGAGGGGCCGCTCCTACTTTAATCAAAGCTGAGGTGCCATGGTCAGCTAGAAGGGGTACTCTATCTGATAAGGACCGCGTGTTGAAGACTGTGAAGGGGATTCTGAACAAGCTGACTCCGGAGAAGTTTGATCTCCTCAAGGGGCAACTTATAGACTCTGGCATTACATCGGCTGATATCTTAAAGGGGGTTATTTCACTGATATTTGATAAGGCCGTGCTAGAACCTACATTTTGCCCCATGTATGCTCTTCTGTGTTCTGATCTTAATGAAAAGCTTCCTCGGTTCCCCTCAGATGAACCAGATGGTAAAGAAATCACTTTCAAGCGCATCCTCTTGAATAACTGCCAGGAGGCTTTTGATGGCACTGACAAATTGAGAGAAGAAGTTAGACAGTTGACTGCCCCTGAACAAGAGATGGAACGTAGGGATAAAGAAAGATTGGCCAAGATTCGTACTCTGGGAAACATTCGTTTAATTGGAGAGCTTCTGAAGCAGAAGATGGTACCTGAAAAGATTGTACATCACATTGTTGCGGAACTCTTAGGATCCGATAACAAAATTTGTCCTGCTGAGGAAAACGTGGAGGCACTATGTCATTTTTTTACCACAATTGGAAAGCAGCTTGATGAGAAGCCAAAATCACGCAGTATAAATGATATGTACTTCAGCCGAATGAAGGAACTGACAACAAACCCTCAATTGGCTCCAAGGTTGAGGTTCATGGTTCGTGATGTAATTGATTTGCGTTCCAACAACTGGGTTCCTAGACGTGAAGAGATAAAAGCCAAAACCATCACTGAAATACATACAGAGGCAGAAAAAAATCTTGGATTGCGTCCAGGGACTACTGCAAGCATCCGAAGTGGTCGTAACAACATTTCTGGTGCTCAAGGGAGTACCAGCCCCGGGGGATATCCCAACAACCGACCTGGTTTAGGGGGTATGATGCCTGGAATGCCCGGAACAAGGAAAATGCCTGGGATGCCTGGAATGGATAATGACAATTGGGAGGTTCAGAGGAACCGGTCAACGCCAAGGGGTGATGGGTTTGGTATGCAGCCTGGTGGTGGGCGTGGCCAGGTGCCGCTGGTTGGAAAATCAACATCAGTGAACACAAGGCTGTTACCTCAGGGTAGTGGTGGCCTTGGCAGTGGCAGACCTAGTGCCTTACTGCAGGGTAGTGGTTCCCCTCCTGCCCGTCCATCCAACCATGCTTATGGTGCAGAGCCTGTAGCTCAAGCGCCAGTGCCTGCTAGACCTGTTGTTGCTCCTTACGTGGCACCAGTTGTTGAAAAGCCACAAGCTCCAGCTCCAGCTGCGGTTCCAAAGTTGAAACTAGATGAGCTTAGGAGAAAAACAATCTCCCTTTTTGAGGAATATTTCAGTATCGGACTCTTAGACGAAGCGCTACTGTGCGTGGAGGAGCTACAGTCTCCTGCTTACCATCCCGAGGTTGTCAAGGAAGGTATCACCCTTGCACTAGAGAAGAGTCGACCATGTGTTGAACCACTTGTGAAGCTTCTTGAGCATCTGTTTTCTAAGAAGGTGCTTACGACTAGTGACATAAGGAGGGGGTGTTTACTCTATGCATCTATCCTGAACGATGTTGGCATAGACCTGCCAAAAGCGCCTACTAACTTTGGTGAAATTATAGGGAAATTAGTCTTGGTTGGAGGTTTGGATTTCAAGGTGGTGAAAGATGTCCTGAAGGGGGTGGACGACGACTACTTCCAGAAAGCTATATTGGATGGTGCAGTGAAGGTCGTTAGCTCTAGTCCGTCAGGGCAAGGCCTGCTGGAATCACAAGCATCTGATATTGACGCGTGCCGTGGCCTATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03013 ko05416 map03013 map05416

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

815

Amino Acids

88.74

Weight (kDa)

8.71

Isoelectric Point (pI)

55.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIF4G	PF02854	228 - 453	9.2e-55	MIF4G domain
MA3	PF02847	650 - 762	2.3e-26	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003545)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57870 AT5G57870
fragaria_vesca	FvH4_1g00720 FvH4_1g00720 FvH4_2g41200
malus_domestica	MD02G1005900.v1.1 MD02G1006000.v1.1 MD08G1055400.v1.1 MD15G1150600.v1.1
prunus_persica	Prupe.1G395100_v2.0.a1 Prupe.7G265100_v2.0.a1
pyrus_communis	pycom02g00490 pycom08g04550 pycom14g07580 pycom15g13480
rosa_chinensis	RchiOBHm_Chr2g0085441 RchiOBHm_Chr6g0299311
rosa_laevigata	RLG00000011443 RLG00000015688
rosa_multiflora	Rmu_sc0007908.1_g000012 Rmu_ssc0000374.1_g000005
rosa_roxburghii	Rroxscaffold_2G00155380 Rroxscaffold_7G00168790
rosa_rugosa	Rorug01G0460400 Rorug06G0287100
rosa_samantha	Rh2AG008600 Rh2BG009900 Rh2CG010400 Rh2DG010800 Rh6AG398600 Rh6BG407000 Rh6CG413000 Rh6DG399800
rosa_wichuraiana	Rw2G000830 Rw6G034890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	69
Acc36I	ACCTGC	1 cut(s)	2229
Acc65I	GGTACC	1 cut(s)	1105
AccB1I	GGYRCC	4 cut(s)	634, 1105, 1684, 1882
AccB7I	CCANNNNNTGG	1 cut(s)	1359
AccBSI	CCGCTC	1 cut(s)	611
AccI	GTMKAC	2 cut(s)	61, 2095
AccII	CGCG	3 cut(s)	51, 678, 2426
AccIII	TCCGGA	1 cut(s)	718
AclWI	GGATC	3 cut(s)	265, 1143, 1156
AcoI	YGGCCR	3 cut(s)	460, 1044, 1678
AcsI	RAATTY	3 cut(s)	309, 341, 1161
AcuI	CTGAAG	3 cut(s)	1112, 1252, 2330
AfaI	GTAC	6 cut(s)	658, 1057, 1107, 1122, 1265, 1501
AfeI	AGCGCT	1 cut(s)	2010
AflIII	ACRYGT	1 cut(s)	2424
AgeI	ACCGGT	2 cut(s)	19, 1626
AgsI	TTSAA	8 cut(s)	335, 685, 925, 940, 1895, 1936, 2108, 2290
AhlI	ACTAGT	1 cut(s)	2159
AjiI	CACGTC	1 cut(s)	1373
AjnI	CCWGG	9 cut(s)	37, 948, 1441, 1531, 1552, 1579, 1588, 1663, 1680
AjuI	GAANNNNNNNTTGG	6 cut(s)	1413, 1445, 2252, 2284, 2330, 2362
Alw21I	GWGCWC	2 cut(s)	300, 1492
Alw26I	GTCTC	4 cut(s)	28, 216, 258, 2040
AlwI	GGATC	3 cut(s)	265, 1143, 1156
AlwNI	CAGNNNCTG	3 cut(s)	479, 1832, 1853
Ama87I	CYCGRG	2 cut(s)	1508, 2051
Aor13HI	TCCGGA	1 cut(s)	718
Aor51HI	AGCGCT	1 cut(s)	2010
AoxI	GGCC	9 cut(s)	106, 460, 606, 813, 1044, 1678, 1744, 2392, 2434
ApeKI	GCWGC	4 cut(s)	4, 1222, 1660, 1919
ApoI	RAATTY	3 cut(s)	309, 341, 1161
ArsI	GACNNNNNNTTYG	2 cut(s)	215, 247
AsiGI	ACCGGT	2 cut(s)	19, 1626
Asp700I	GAANNNNTTC	1 cut(s)	876
Asp718I	GGTACC	1 cut(s)	1105
AspLEI	GCGC	5 cut(s)	194, 930, 1846, 2011, 2233
AspS9I	GGNCC	4 cut(s)	71, 107, 606, 673
AsuC2I	CCSGG	4 cut(s)	449, 1509, 1510, 1563
AsuHPI	GGTGA	6 cut(s)	23, 365, 1655, 2065, 2258, 2308
AvaI	CYCGRG	2 cut(s)	1508, 2051
AvaII	GGWCC	2 cut(s)	71, 673
AxyI	CCTNAGG	1 cut(s)	1731
BalI	TGGCCA	2 cut(s)	1046, 1680
BamHI	GGATCC	1 cut(s)	1148
BanI	GGYRCC	4 cut(s)	634, 1105, 1684, 1882
BbsI	GAAGAC	2 cut(s)	105, 692
Bbv12I	GWGCWC	2 cut(s)	300, 1492
BbvCI	CCTCAGC	2 cut(s)	630, 1173
BbvI	GCAGC	4 cut(s)	16, 1234, 1672, 1906
BceAI	ACGGC	3 cut(s)	447, 800, 2415
BciT130I	CCWGG	9 cut(s)	39, 950, 1443, 1533, 1554, 1581, 1590, 1665, 1682
BciVI	GTATCC	1 cut(s)	499
BclI	TGATCA	1 cut(s)	13
BcnI	CCSGG	4 cut(s)	449, 1509, 1510, 1563
BcoDI	GTCTC	4 cut(s)	28, 216, 258, 2040
BcuI	ACTAGT	1 cut(s)	2159
BfmI	CTRYAG	4 cut(s)	275, 1775, 1833, 2030
BfoI	RGCGCY	4 cut(s)	195, 1847, 2012, 2234
BfuAI	ACCTGC	1 cut(s)	2229
BfuI	GTATCC	1 cut(s)	499
BisI	GCNGC	8 cut(s)	5, 99, 190, 609, 1223, 1661, 1688, 1920
BlsI	GCNGC	8 cut(s)	6, 100, 191, 610, 1224, 1662, 1689, 1921
Bme18I	GGWCC	2 cut(s)	71, 673
BmeT110I	CYCGRG	2 cut(s)	1508, 2051
BmgBI	CACGTC	1 cut(s)	1373
BmgT120I	GGNCC	4 cut(s)	71, 107, 606, 673
BmrI	ACTGGG	1 cut(s)	1369
BmsI	GCATC	8 cut(s)	550, 939, 1467, 1539, 1575, 2140, 2201, 2420
BmuI	ACTGGG	1 cut(s)	1369
BpiI	GAAGAC	2 cut(s)	105, 692
BpmI	CTGGAG	5 cut(s)	240, 399, 507, 1893, 1899
Bpu10I	CCTNAGC	3 cut(s)	630, 1173, 1949
BpuEI	CTTGAG	5 cut(s)	52, 722, 1476, 1824, 2147
BpuMI	CCSGG	4 cut(s)	449, 1509, 1510, 1563
BsaAI	YACGTR	1 cut(s)	1879
BsaBI	GATNNNNATC	1 cut(s)	564
BsaI	GGTCTC	2 cut(s)	28, 258
BsaWI	WCCGGW	3 cut(s)	19, 718, 1626
BsaXI	ACNNNNNCTCC	8 cut(s)	74, 104, 397, 427, 2018, 2048, 2164, 2194
Bse118I	RCCGGY	2 cut(s)	19, 1626
Bse1I	ACTGG	4 cut(s)	473, 1364, 1847, 1886
Bse21I	CCTNAGG	1 cut(s)	1731
Bse8I	GATNNNNATC	1 cut(s)	564
BseAI	TCCGGA	1 cut(s)	718
BseBI	CCWGG	9 cut(s)	39, 950, 1443, 1533, 1554, 1581, 1590, 1665, 1682
BseGI	GGATG	6 cut(s)	930, 1458, 1590, 1805, 2047, 2356
BseJI	GATNNNNATC	1 cut(s)	564
BseMII	CTCAG	4 cut(s)	621, 906, 1164, 1745
BseNI	ACTGG	4 cut(s)	473, 1364, 1847, 1886
BseRI	GAGGAG	5 cut(s)	76, 79, 82, 725, 2039
BseXI	GCAGC	4 cut(s)	16, 1234, 1672, 1906
BseYI	CCCAGC	1 cut(s)	366
BsgI	GTGCAG	4 cut(s)	396, 453, 1845, 2376
Bsh1236I	CGCG	3 cut(s)	51, 678, 2426
Bsh1285I	CGRYCG	1 cut(s)	49
BshFI	GGCC	9 cut(s)	108, 462, 608, 815, 1046, 1680, 1746, 2394, 2436
BshNI	GGYRCC	4 cut(s)	634, 1105, 1684, 1882
BshTI	ACCGGT	2 cut(s)	19, 1626
BsiEI	CGRYCG	1 cut(s)	49
BsiHKAI	GWGCWC	2 cut(s)	300, 1492
BsiHKCI	CYCGRG	2 cut(s)	1508, 2051
BsiSI	CCGG	7 cut(s)	20, 105, 448, 719, 1509, 1563, 1627
BslFI	GGGAC	2 cut(s)	165, 1459
BsmAI	GTCTC	4 cut(s)	28, 216, 258, 2040
BsmBI	CGTCTC	1 cut(s)	216
BsmFI	GGGAC	2 cut(s)	165, 1459
BsmI	GAATGC	1 cut(s)	1563
BsnI	GGCC	9 cut(s)	108, 462, 608, 815, 1046, 1680, 1746, 2394, 2436
Bso31I	GGTCTC	2 cut(s)	28, 258
BsoBI	CYCGRG	2 cut(s)	1508, 2051
Bsp1286I	GDGCHC	2 cut(s)	300, 1492
Bsp13I	TCCGGA	1 cut(s)	718
Bsp1407I	TGTACA	1 cut(s)	1120
Bsp143I	GATC	7 cut(s)	13, 163, 270, 358, 730, 862, 1148
Bsp19I	CCATGG	2 cut(s)	184, 638
BspANI	GGCC	9 cut(s)	108, 462, 608, 815, 1046, 1680, 1746, 2394, 2436
BspCNI	CTCAG	4 cut(s)	622, 905, 1165, 1744
BspEI	TCCGGA	1 cut(s)	718
BspFNI	CGCG	3 cut(s)	51, 678, 2426
BspMAI	CTGCAG	1 cut(s)	1779
BspMI	ACCTGC	1 cut(s)	2229
BspPI	GGATC	3 cut(s)	265, 1143, 1156
BspQI	GCTCTTC	1 cut(s)	855
BspT107I	GGYRCC	4 cut(s)	634, 1105, 1684, 1882
BspTNI	GGTCTC	2 cut(s)	28, 258
BsrBI	CCGCTC	1 cut(s)	611
BsrFI	RCCGGY	2 cut(s)	19, 1626
BsrGI	TGTACA	1 cut(s)	1120
BsrI	ACTGG	4 cut(s)	473, 1364, 1847, 1886
BssAI	RCCGGY	2 cut(s)	19, 1626
BssMI	GATC	7 cut(s)	13, 163, 270, 358, 730, 862, 1148
BssT1I	CCWWGG	7 cut(s)	67, 184, 595, 638, 1310, 1637, 1747
Bst2UI	CCWGG	9 cut(s)	39, 950, 1443, 1533, 1554, 1581, 1590, 1665, 1682
Bst4CI	ACNGT	6 cut(s)	231, 498, 691, 996, 2016, 2034
Bst6I	CTCTTC	5 cut(s)	177, 516, 855, 1371, 2084
BstAPI	GCANNNNNTGC	1 cut(s)	2395
BstAUI	TGTACA	1 cut(s)	1120
BstBAI	YACGTR	1 cut(s)	1879
BstC8I	GCNNGC	5 cut(s)	393, 1456, 1854, 2396, 2428
BstDEI	CTNAG	9 cut(s)	281, 630, 892, 1144, 1173, 1731, 1949, 1999, 2142
BstDSI	CCRYGG	3 cut(s)	184, 638, 2431
BstENI	CCTNNNNNAGG	2 cut(s)	1536, 1973
BstF5I	GGATG	6 cut(s)	930, 1458, 1590, 1805, 2047, 2356
BstFNI	CGCG	3 cut(s)	51, 678, 2426
BstH2I	RGCGCY	4 cut(s)	195, 1847, 2012, 2234
BstHHI	GCGC	5 cut(s)	194, 930, 1846, 2011, 2233
BstKTI	GATC	7 cut(s)	16, 166, 273, 361, 733, 865, 1151
BstMAI	GTCTC	4 cut(s)	28, 216, 258, 2040
BstMBI	GATC	7 cut(s)	13, 163, 270, 358, 730, 862, 1148
BstMCI	CGRYCG	1 cut(s)	49
BstNI	CCWGG	9 cut(s)	39, 950, 1443, 1533, 1554, 1581, 1590, 1665, 1682
BstSFI	CTRYAG	4 cut(s)	275, 1775, 1833, 2030
BstUI	CGCG	3 cut(s)	51, 678, 2426
BstV1I	GCAGC	4 cut(s)	16, 1234, 1672, 1906
BstV2I	GAAGAC	2 cut(s)	105, 692
BstX2I	RGATCY	2 cut(s)	270, 1148
BstXI	CCANNNNNNTGG	1 cut(s)	1820
BstYI	RGATCY	2 cut(s)	270, 1148
Bsu36I	CCTNAGG	1 cut(s)	1731
BsuI	GTATCC	1 cut(s)	499
BsuRI	GGCC	9 cut(s)	108, 462, 608, 815, 1046, 1680, 1746, 2394, 2436
BtgI	CCRYGG	3 cut(s)	184, 638, 2431
BtrI	CACGTC	1 cut(s)	1373
BtsCI	GGATG	6 cut(s)	930, 1458, 1590, 1805, 2047, 2356
BtsI	GCAGTG	2 cut(s)	1759, 2364
BtsIMutI	CAGTG	9 cut(s)	355, 587, 797, 966, 1398, 1716, 1759, 1854, 2364
BveI	ACCTGC	1 cut(s)	2229
Cac8I	GCNNGC	5 cut(s)	393, 1456, 1854, 2396, 2428
CaiI	CAGNNNCTG	3 cut(s)	479, 1832, 1853
CfoI	GCGC	5 cut(s)	194, 930, 1846, 2011, 2233
Cfr10I	RCCGGY	2 cut(s)	19, 1626
Cfr13I	GGNCC	4 cut(s)	71, 107, 606, 673
Cfr9I	CCCGGG	1 cut(s)	1508
CseI	GACGC	3 cut(s)	233, 1427, 2432
CsiI	ACCWGGT	2 cut(s)	37, 1531
Csp6I	GTAC	6 cut(s)	657, 1056, 1106, 1121, 1264, 1500
CspAI	ACCGGT	2 cut(s)	19, 1626
CviAII	CATG	6 cut(s)	185, 639, 841, 1324, 1814, 2100
CviQI	GTAC	6 cut(s)	657, 1056, 1106, 1121, 1264, 1500
DdeI	CTNAG	9 cut(s)	281, 630, 892, 1144, 1173, 1731, 1949, 1999, 2142
DpnI	GATC	7 cut(s)	15, 165, 272, 360, 732, 864, 1150
DpnII	GATC	7 cut(s)	13, 163, 270, 358, 730, 862, 1148
DrdI	GACNNNNNNGTC	1 cut(s)	69
DseDI	GACNNNNNNGTC	1 cut(s)	69
EaeI	YGGCCR	3 cut(s)	460, 1044, 1678
Eam1104I	CTCTTC	5 cut(s)	177, 516, 855, 1371, 2084
EarI	CTCTTC	5 cut(s)	177, 516, 855, 1371, 2084
EciI	GGCGGA	1 cut(s)	85
Eco130I	CCWWGG	7 cut(s)	67, 184, 595, 638, 1310, 1637, 1747
Eco147I	AGGCCT	1 cut(s)	2394
Eco31I	GGTCTC	2 cut(s)	28, 258
Eco32I	GATATC	2 cut(s)	778, 1517
Eco47I	GGWCC	2 cut(s)	71, 673
Eco47III	AGCGCT	1 cut(s)	2010
Eco57I	CTGAAG	3 cut(s)	1112, 1252, 2330
Eco81I	CCTNAGG	1 cut(s)	1731
Eco88I	CYCGRG	2 cut(s)	1508, 2051
EcoNI	CCTNNNNNAGG	2 cut(s)	1536, 1973
EcoRII	CCWGG	9 cut(s)	37, 948, 1441, 1531, 1552, 1579, 1588, 1663, 1680
EcoRV	GATATC	2 cut(s)	778, 1517
EcoT14I	CCWWGG	7 cut(s)	67, 184, 595, 638, 1310, 1637, 1747
EcoT22I	ATGCAT	1 cut(s)	2194
ErhI	CCWWGG	7 cut(s)	67, 184, 595, 638, 1310, 1637, 1747
Esp3I	CGTCTC	1 cut(s)	216
FaeI	CATG	6 cut(s)	188, 642, 844, 1327, 1817, 2103
FaqI	GGGAC	2 cut(s)	165, 1459
FatI	CATG	6 cut(s)	184, 638, 840, 1323, 1813, 2099
FbaI	TGATCA	1 cut(s)	13
FblI	GTMKAC	2 cut(s)	61, 2095
Fnu4HI	GCNGC	8 cut(s)	5, 99, 190, 609, 1223, 1661, 1688, 1920
FokI	GGATG	6 cut(s)	917, 1445, 1597, 1792, 2034, 2363
Fsp4HI	GCNGC	8 cut(s)	5, 99, 190, 609, 1223, 1661, 1688, 1920
GlaI	GCGC	5 cut(s)	193, 929, 1845, 2010, 2232
GluI	GCNGC	8 cut(s)	5, 99, 190, 609, 1223, 1661, 1688, 1920
GsaI	CCCAGC	1 cut(s)	370
GsuI	CTGGAG	5 cut(s)	240, 399, 507, 1893, 1899
HaeII	RGCGCY	4 cut(s)	195, 1847, 2012, 2234
HaeIII	GGCC	9 cut(s)	108, 462, 608, 815, 1046, 1680, 1746, 2394, 2436
HapII	CCGG	7 cut(s)	20, 105, 448, 719, 1509, 1563, 1627
HgaI	GACGC	3 cut(s)	233, 1427, 2432
HhaI	GCGC	5 cut(s)	194, 930, 1846, 2011, 2233
Hin1II	CATG	6 cut(s)	188, 642, 844, 1327, 1817, 2103
Hin6I	GCGC	5 cut(s)	192, 928, 1844, 2009, 2231
HinP1I	GCGC	5 cut(s)	192, 928, 1844, 2009, 2231
HincII	GTYRAC	3 cut(s)	999, 1632, 2096
HindII	GTYRAC	3 cut(s)	999, 1632, 2096
HindIII	AAGCTT	2 cut(s)	875, 2120
HpaII	CCGG	7 cut(s)	20, 105, 448, 719, 1509, 1563, 1627
HphI	GGTGA	6 cut(s)	23, 365, 1655, 2065, 2258, 2308
Hpy166II	GTNNAC	7 cut(s)	62, 999, 1632, 1714, 2096, 2183, 2320
Hpy8I	GTNNAC	7 cut(s)	62, 999, 1632, 1714, 2096, 2183, 2320
Hpy99I	CGWCG	6 cut(s)	124, 127, 130, 133, 136, 2327
HpyAV	CCTTC	7 cut(s)	645, 688, 1273, 2060, 2140, 2305, 2356
HpyCH4III	ACNGT	6 cut(s)	231, 498, 691, 996, 2016, 2034
HpyCH4IV	ACGT	4 cut(s)	1024, 1182, 1372, 1878
HpyF3I	CTNAG	9 cut(s)	281, 630, 892, 1144, 1173, 1731, 1949, 1999, 2142
HpySE526I	ACGT	4 cut(s)	1024, 1182, 1372, 1878
Hsp92II	CATG	6 cut(s)	188, 642, 844, 1327, 1817, 2103
HspAI	GCGC	5 cut(s)	192, 928, 1844, 2009, 2231
Kpn2I	TCCGGA	1 cut(s)	718
KpnI	GGTACC	1 cut(s)	1109
Ksp22I	TGATCA	1 cut(s)	13
Kzo9I	GATC	7 cut(s)	13, 163, 270, 358, 730, 862, 1148
LguI	GCTCTTC	1 cut(s)	855
LmnI	GCTCC	9 cut(s)	199, 303, 436, 616, 1312, 1876, 1912, 1918, 2026
Lsp1109I	GCAGC	4 cut(s)	16, 1234, 1672, 1906
LweI	GCATC	8 cut(s)	550, 939, 1467, 1539, 1575, 2140, 2201, 2420
MabI	ACCWGGT	2 cut(s)	37, 1531
MaeII	ACGT	4 cut(s)	1024, 1182, 1372, 1878
MaeIII	GTNAC	3 cut(s)	1472, 1725, 2162
MalI	GATC	7 cut(s)	15, 165, 272, 360, 732, 864, 1150
MbiI	CCGCTC	1 cut(s)	611
MboI	GATC	7 cut(s)	13, 163, 270, 358, 730, 862, 1148
MfeI	CAATTG	3 cut(s)	1212, 1301, 1606
MflI	RGATCY	2 cut(s)	270, 1148
MhlI	GDGCHC	2 cut(s)	300, 1492
MlsI	TGGCCA	2 cut(s)	1046, 1680
MluI	ACGCGT	1 cut(s)	2424
MluNI	TGGCCA	2 cut(s)	1046, 1680
MlyI	GAGTC	7 cut(s)	57, 77, 536, 709, 749, 1989, 2101
MmeI	TCCRAC	5 cut(s)	428, 1377, 1675, 1833, 2254
Mox20I	TGGCCA	2 cut(s)	1046, 1680
Mph1103I	ATGCAT	1 cut(s)	2194
MroI	TCCGGA	1 cut(s)	718
MroXI	GAANNNNTTC	1 cut(s)	876
MscI	TGGCCA	2 cut(s)	1046, 1680
MseI	TTAA	4 cut(s)	620, 782, 867, 1076
MslI	CAYNNNNRTG	1 cut(s)	1818
Msp20I	TGGCCA	2 cut(s)	1046, 1680
MspA1I	CMGCKG	2 cut(s)	1690, 1919
MspI	CCGG	7 cut(s)	20, 105, 448, 719, 1509, 1563, 1627
MunI	CAATTG	3 cut(s)	1212, 1301, 1606
Mva1269I	GAATGC	1 cut(s)	1563
MvaI	CCWGG	9 cut(s)	39, 950, 1443, 1533, 1554, 1581, 1590, 1665, 1682
MvnI	CGCG	3 cut(s)	51, 678, 2426
NciI	CCSGG	4 cut(s)	449, 1509, 1510, 1563
NcoI	CCATGG	2 cut(s)	184, 638
NdeII	GATC	7 cut(s)	13, 163, 270, 358, 730, 862, 1148
NlaIII	CATG	6 cut(s)	188, 642, 844, 1327, 1817, 2103
NmuCI	GTSAC	1 cut(s)	2162
NsiI	ATGCAT	1 cut(s)	2194
PceI	AGGCCT	1 cut(s)	2394
PciSI	GCTCTTC	1 cut(s)	855
PcsI	WCGNNNNNNNCGW	4 cut(s)	125, 128, 131, 231
PctI	GAATGC	1 cut(s)	1563
PdmI	GAANNNNTTC	1 cut(s)	876
PfeI	GAWTC	3 cut(s)	700, 1051, 2402
PflMI	CCANNNNNTGG	1 cut(s)	1359
PinAI	ACCGGT	2 cut(s)	19, 1626
PkrI	GCNGC	8 cut(s)	6, 100, 191, 610, 1224, 1662, 1689, 1921
PleI	GAGTC	7 cut(s)	57, 77, 535, 709, 749, 1989, 2100
PpsI	GAGTC	7 cut(s)	57, 77, 535, 709, 749, 1989, 2100
Ppu21I	YACGTR	1 cut(s)	1879
Psp6I	CCWGG	9 cut(s)	37, 948, 1441, 1531, 1552, 1579, 1588, 1663, 1680
PspFI	CCCAGC	1 cut(s)	366
PspGI	CCWGG	9 cut(s)	37, 948, 1441, 1531, 1552, 1579, 1588, 1663, 1680
PspPI	GGNCC	4 cut(s)	71, 107, 606, 673
PstI	CTGCAG	1 cut(s)	1779
PstNI	CAGNNNCTG	3 cut(s)	479, 1832, 1853
PsuI	RGATCY	2 cut(s)	270, 1148
PvuII	CAGCTG	1 cut(s)	1919
RsaI	GTAC	6 cut(s)	658, 1057, 1107, 1122, 1265, 1501
RsaNI	GTAC	6 cut(s)	657, 1056, 1106, 1121, 1264, 1500
RseI	CAYNNNNRTG	1 cut(s)	1818
SalI	GTCGAC	1 cut(s)	2094
SapI	GCTCTTC	1 cut(s)	855
SaqAI	TTAA	4 cut(s)	620, 782, 867, 1076
SatI	GCNGC	8 cut(s)	5, 99, 190, 609, 1223, 1661, 1688, 1920
Sau3AI	GATC	7 cut(s)	13, 163, 270, 358, 730, 862, 1148
Sau96I	GGNCC	4 cut(s)	71, 107, 606, 673
SchI	GAGTC	7 cut(s)	57, 77, 536, 709, 749, 1989, 2101
SduI	GDGCHC	2 cut(s)	300, 1492
SexAI	ACCWGGT	2 cut(s)	37, 1531
SfaNI	GCATC	8 cut(s)	550, 939, 1467, 1539, 1575, 2140, 2201, 2420
SfcI	CTRYAG	4 cut(s)	275, 1775, 1833, 2030
SinI	GGWCC	2 cut(s)	71, 673
SmaI	CCCGGG	1 cut(s)	1510
SmiMI	CAYNNNNRTG	1 cut(s)	1818
SmlI	CTYRAG	5 cut(s)	31, 737, 1491, 1839, 2126
SmoI	CTYRAG	5 cut(s)	31, 737, 1491, 1839, 2126
SpeI	ACTAGT	1 cut(s)	2159
SseBI	AGGCCT	1 cut(s)	2394
SspI	AATATT	1 cut(s)	1982
StuI	AGGCCT	1 cut(s)	2394
StyI	CCWWGG	7 cut(s)	67, 184, 595, 638, 1310, 1637, 1747
TaaI	ACNGT	6 cut(s)	231, 498, 691, 996, 2016, 2034
TaiI	ACGT	4 cut(s)	1027, 1185, 1375, 1881
TaqI	TCGA	3 cut(s)	81, 234, 2095
TatI	WGTACW	2 cut(s)	1120, 1263
TauI	GCSGC	4 cut(s)	101, 192, 611, 1690
TfiI	GAWTC	3 cut(s)	700, 1051, 2402
Tru1I	TTAA	4 cut(s)	620, 782, 867, 1076
Tru9I	TTAA	4 cut(s)	620, 782, 867, 1076
TscAI	CASTG	9 cut(s)	355, 594, 804, 973, 1405, 1716, 1759, 1854, 2364
TseFI	GTSAC	1 cut(s)	2162
TseI	GCWGC	4 cut(s)	4, 1222, 1660, 1919
Tsp45I	GTSAC	1 cut(s)	2162
TspDTI	ATGAA	5 cut(s)	321, 885, 912, 1292, 1312
TspGWI	ACGGA	2 cut(s)	167, 2370
TspMI	CCCGGG	1 cut(s)	1508
TspRI	CASTG	9 cut(s)	355, 594, 804, 973, 1405, 1716, 1759, 1854, 2364
Van91I	CCANNNNNTGG	1 cut(s)	1359
VpaK11BI	GGWCC	2 cut(s)	71, 673
XagI	CCTNNNNNAGG	2 cut(s)	1536, 1973
XapI	RAATTY	3 cut(s)	309, 341, 1161
XmaI	CCCGGG	1 cut(s)	1508
XmiI	GTMKAC	2 cut(s)	61, 2095
XmnI	GAANNNNTTC	1 cut(s)	876
Zsp2I	ATGCAT	1 cut(s)	2194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.