Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0003545

Physical Location & Seq

Genomic Coordinates Reverse (-)

91749207 .. 91754321

Gene Structure 5115 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00155380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2232 bp

ATGCAGCAGGCTGATCAATCGGTGTTGAGCTTGAGACCTGGTGGCGGTCGTGGTAGACTCCTTGGTCCTCGCTTCGACTCTTCCTCCGCCCAGTCTTCTTCTCTAGCTTTCGGTTCCTTTTCTTCTGATCTTCCCACCTTGCGTCCCCATGGCGGGGCCGGCGCTGGGTTCTCTATTAAGGCCGGAGATTCGCGATTTGAGGGTCGTGACCGCGTGAAGTACACTAGAGAGCAGATCTTGCAGCTTAGAGAGGTTGTTGAGGTCCCTGATGAAATTATAAAAGTCAGACAAGAAGTTGAAGCTGAGTTTCTTCTTGCTGAAGATCAACCTTGGGTTCGTGCAGAACCCAATGTGAACAATTTGCCAAATCAACCGGCTCATTATACGGAGCCAGACAACCGGGATTGGCGCAACCGTCGTGCTCCAGTTCCTGAGACACTTAGGGAGAATAGAGAGCCTGGTAATTACAGACAGCAGGAAGCAAATCAGCAACAATATCCAAGGGCACAAAACTCTTCCAACCAAGGGGGAGGGCCTGTTCCTGCTCTAGTAAAAGCTGAGGTCCCATGGTCAGCTAGAAGGGGTACCCTATCTGACAAGGACCGTGTGGTGAAGACTGTTAAGGGGATACTGAACAAGCTGACCCCAGAGAAGTTTGATCTCCTTAAAGGACAGTTAGTAGACTCTGGAATTACCTCGGCTGATATTCTAAAGGTCGCTTCCCGGTTCCCGTCAGAGGAACCAGATGGAAAAGAAATCACTTTCAAGCGTGTCCTCCTGAACAATTGCCAAGAGGCTTTTGATGGTGCTGACAAGTTGAGGGAAGAAGTGCGGCAGATGACTGCCCCTGAACAAGAGATGGAACGTAGGGATAAAGAAAGATTGGCTAAGATACGTACTCTGGGAAACATTCGTTTAATTGGGAGAGCTCCTGAAGCAGAAGATGGAGCTGACAACAGCATTTGTCCTGCTGAGGAAAATGTGGAGGCCATATGCCATTTTTTTACCACTATTGGTAAACAGCTTGATGAGAATCAAAAATCACGTCGTATAAATGATTTGTACTTCGGCCGATTGAAAGAACTGACAACAAACCCTCAGTTGGCTCCAAGGCTGAGGTTCATGGTTCGGGATGTAATTGATTTGCGCTCCAACAACTGGGTTCCCAGGCGTGAGGAGGTGAAAGCCAAAACCATCAGTGAAATACATACAGAGGCAGAAAAGAATCTTGGATTACGTCCTGGTAGCACTAGAACTGGTCGTGGCAACTTTTCTGGTACTCAAGGGAGTACCAGCCCCGGGCCCTTCTCCAACAGCCGACCTGGTTCAGGGGGTATGATGCCTGGTATGCCTGGGTTTCCAGGAACTAGGAAGATGCCTGGTATGCCTGGAATGGACAATGACAATTGGGAGGTGTCTAAGACCCGGTCAATGCCAAGAGGTGATGGTTCTGGTATGCAGCCAGCTGGGCGTGGGGGCCAGATGCCATTTATTGGCAAATCAACATCGGTGAACACAAGGCTGTTACCTCAGGGTAGTAGTGGCCTTACAAGTGGACGCCCTAGTGCCTTGTTGCAGGGTAGTGGTGCTCCTCCTGCTCGCCCAAGCAACTACTCTTTTGACACTGAGCCTGTAGCGCAGGTTCCTGTGCCTGCTAGACCTGTTCCTACTGCACCTGTATCACGACCTGTTGAAAAGCCACAAGCTCCAGCTTCCAAGTTGAAAGTAGATGAACTTAGGAAAAAAACAGTTTCTCTTTTGGAGGAATATTTCAGTGTGCGAATTTTAGGTGAAGCATTATTGTGTGTGGAGGAGCTAAGATCTCCAGCTTACCACCCTGAGGTTGTCAAAGAAGCTATCTCCCTTGCGCTGGAGAAAAGTACATCCTATGTTGAACCACTTTTTAAGCTTCTCGAGCATTTGTTCTCTAAGAAGGTCATTACAGCGAGTGACATAAGGAGTGGATGTTTGCTCTATGCATCTTTGCTGAGTGAAATCGGCATTGATTATCCTAAAGCACCGAGTTATTTTGGTGAAGTTATGGGAAAATTAATTTTAGTTGGAGCTTTGGATTTTAAGGTGGTGAAAGAGGTTTTGAAGGAGGTGGATGATGACTACTATCAGAAAGCCATATTCAATGCAGGACTGCAGGTTATTAGTTCTACCCCTTCGGGGCAAGCTGTGCTGGATTCACAAGCATCTGATATTGAGGCCTGCCAGAGTCTATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03013 ko05416 map03013 map05416

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

743

Amino Acids

81.74

Weight (kDa)

8.63

Isoelectric Point (pI)

54.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIF4G	PF02854	323 - 386	1.1e-12	MIF4G domain
MA3	PF02847	579 - 691	5.1e-26	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003545)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57870 AT5G57870
fragaria_vesca	FvH4_1g00720 FvH4_1g00720 FvH4_2g41200
malus_domestica	MD02G1005900.v1.1 MD02G1006000.v1.1 MD08G1055400.v1.1 MD15G1150600.v1.1
prunus_persica	Prupe.1G395100_v2.0.a1 Prupe.7G265100_v2.0.a1
pyrus_communis	pycom02g00490 pycom08g04550 pycom14g07580 pycom15g13480
rosa_chinensis	RchiOBHm_Chr2g0085441 RchiOBHm_Chr6g0299311
rosa_laevigata	RLG00000011443 RLG00000015688
rosa_multiflora	Rmu_sc0007908.1_g000012 Rmu_ssc0000374.1_g000005
rosa_roxburghii	Rroxscaffold_2G00155380 Rroxscaffold_7G00168790
rosa_rugosa	Rorug01G0460400 Rorug06G0287100
rosa_samantha	Rh2AG008600 Rh2BG009900 Rh2CG010400 Rh2DG010800 Rh6AG398600 Rh6BG407000 Rh6CG413000 Rh6DG399800
rosa_wichuraiana	Rw2G000830 Rw6G034890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	278
AasI	GACNNNNNNGTC	1 cut(s)	63
Acc36I	ACCTGC	2 cut(s)	1630, 2140
Acc65I	GGTACC	1 cut(s)	584
AccB1I	GGYRCC	1 cut(s)	584
AccB7I	CCANNNNNTGG	2 cut(s)	1158, 1493
AccI	GTMKAC	2 cut(s)	55, 681
AccII	CGCG	2 cut(s)	193, 213
AciI	CCGC	5 cut(s)	45, 87, 153, 211, 832
AcoI	YGGCCR	1 cut(s)	1069
AcsI	RAATTY	1 cut(s)	1782
AcuI	CTGAAG	2 cut(s)	339, 954
AcyI	GRCGYC	1 cut(s)	1558
AfaI	GTAC	7 cut(s)	221, 586, 898, 1064, 1279, 1291, 1882
AgsI	TTSAA	8 cut(s)	299, 766, 1078, 1694, 1723, 1895, 2098, 2137
AjiI	CACGTC	1 cut(s)	1046
AjuI	GAANNNNNNNTTGG	2 cut(s)	1212, 1244
AloI	GAACNNNNNNTCC	2 cut(s)	522, 554
Alw21I	GWGCWC	3 cut(s)	424, 931, 1591
Alw26I	GTCTC	2 cut(s)	28, 428
AlwNI	CAGNNNCTG	1 cut(s)	431
Ama87I	CYCGRG	2 cut(s)	1298, 1913
AoxI	GGCC	9 cut(s)	156, 180, 533, 987, 1069, 1301, 1477, 1543, 2211
ApaI	GGGCCC	1 cut(s)	1305
ApeKI	GCWGC	3 cut(s)	4, 241, 1459
ApoI	RAATTY	1 cut(s)	1782
ArsI	GACNNNNNNTTYG	2 cut(s)	1030, 1062
AseI	ATTAAT	1 cut(s)	2051
Asp718I	GGTACC	1 cut(s)	584
AspLEI	GCGC	5 cut(s)	164, 411, 1149, 1639, 1870
AspS9I	GGNCC	9 cut(s)	65, 156, 262, 533, 562, 601, 1301, 1302, 1477
AsuC2I	CCSGG	5 cut(s)	401, 724, 1299, 1300, 1426
AsuHPI	GGTGA	7 cut(s)	622, 1192, 1454, 1522, 1802, 2045, 2095
AvaI	CYCGRG	2 cut(s)	1298, 1913
AvaII	GGWCC	4 cut(s)	65, 262, 562, 601
AxyI	CCTNAGG	2 cut(s)	1530, 1839
BaeGI	GKGCMC	2 cut(s)	508, 1305
BanI	GGYRCC	1 cut(s)	584
BanII	GRGCYC	2 cut(s)	931, 1305
BbsI	GAAGAC	2 cut(s)	87, 620
Bbv12I	GWGCWC	3 cut(s)	424, 931, 1591
BbvCI	CCTCAGC	3 cut(s)	558, 972, 1115
BbvI	GCAGC	3 cut(s)	16, 253, 1471
BccI	CCATC	6 cut(s)	740, 797, 853, 938, 1202, 1439
BciVI	GTATCC	1 cut(s)	621
BclI	TGATCA	1 cut(s)	13
BcnI	CCSGG	5 cut(s)	401, 724, 1299, 1300, 1426
BcoDI	GTCTC	2 cut(s)	28, 428
BfaI	CTAG	9 cut(s)	104, 225, 548, 576, 1251, 1368, 1563, 1656, 2230
BfmI	CTRYAG	2 cut(s)	1632, 2147
BfoI	RGCGCY	1 cut(s)	165
BfuAI	ACCTGC	2 cut(s)	1630, 2140
BfuI	GTATCC	1 cut(s)	621
BglI	GCCNNNNNGGC	1 cut(s)	1468
BglII	AGATCT	2 cut(s)	234, 1820
BisI	GCNGC	4 cut(s)	5, 242, 833, 1460
BlsI	GCNGC	4 cut(s)	6, 243, 834, 1461
Bme18I	GGWCC	4 cut(s)	65, 262, 562, 601
BmeT110I	CYCGRG	2 cut(s)	1298, 1913
BmgBI	CACGTC	1 cut(s)	1046
BmgT120I	GGNCC	9 cut(s)	65, 156, 262, 533, 562, 601, 1301, 1302, 1477
BmrI	ACTGGG	2 cut(s)	85, 1168
BmsI	GCATC	5 cut(s)	1329, 1365, 1473, 1988, 2207
BmuI	ACTGGG	2 cut(s)	85, 1168
BpiI	GAAGAC	2 cut(s)	87, 620
BpmI	CTGGAG	4 cut(s)	408, 1692, 1809, 1892
Bpu10I	CCTNAGC	3 cut(s)	558, 972, 1115
BpuEI	CTTGAG	2 cut(s)	52, 1266
BpuMI	CCSGG	5 cut(s)	401, 724, 1299, 1300, 1426
BsaAI	YACGTR	1 cut(s)	896
BsaBI	GATNNNNATC	1 cut(s)	1032
BsaHI	GRCGYC	1 cut(s)	1558
BsaI	GGTCTC	1 cut(s)	28
BsaXI	ACNNNNNCTCC	6 cut(s)	68, 98, 522, 552, 1951, 1981
Bse118I	RCCGGY	2 cut(s)	158, 373
Bse1I	ACTGG	4 cut(s)	91, 425, 1163, 1261
Bse21I	CCTNAGG	2 cut(s)	1530, 1839
Bse8I	GATNNNNATC	1 cut(s)	1032
BseGI	GGATG	4 cut(s)	1138, 1883, 1970, 2113
BseJI	GATNNNNATC	1 cut(s)	1032
BseNI	ACTGG	4 cut(s)	91, 425, 1163, 1261
BseRI	GAGGAG	3 cut(s)	1190, 1581, 1826
BseSI	GKGCMC	2 cut(s)	508, 1305
BseX3I	CGGCCG	1 cut(s)	1069
BseXI	GCAGC	3 cut(s)	16, 253, 1471
BseYI	CCCAGC	2 cut(s)	164, 1466
BsgI	GTGCAG	2 cut(s)	360, 1656
Bsh1236I	CGCG	2 cut(s)	193, 213
Bsh1285I	CGRYCG	2 cut(s)	49, 1072
BshFI	GGCC	9 cut(s)	158, 182, 535, 989, 1071, 1303, 1479, 1545, 2213
BshNI	GGYRCC	1 cut(s)	584
BsiEI	CGRYCG	2 cut(s)	49, 1072
BsiHKAI	GWGCWC	3 cut(s)	424, 931, 1591
BsiHKCI	CYCGRG	2 cut(s)	1298, 1913
BsiSI	CCGG	7 cut(s)	159, 183, 374, 400, 724, 1299, 1426
BslFI	GGGAC	3 cut(s)	129, 248, 548
BsmAI	GTCTC	2 cut(s)	28, 428
BsmFI	GGGAC	3 cut(s)	129, 248, 548
BsnI	GGCC	9 cut(s)	158, 182, 535, 989, 1071, 1303, 1479, 1545, 2213
Bso31I	GGTCTC	1 cut(s)	28
BsoBI	CYCGRG	2 cut(s)	1298, 1913
Bsp120I	GGGCCC	1 cut(s)	1301
Bsp1286I	GDGCHC	5 cut(s)	424, 508, 931, 1305, 1591
Bsp143I	GATC	6 cut(s)	13, 127, 234, 322, 658, 1820
Bsp19I	CCATGG	2 cut(s)	148, 566
Bsp68I	TCGCGA	1 cut(s)	193
BspACI	CCGC	5 cut(s)	45, 87, 153, 211, 832
BspANI	GGCC	9 cut(s)	158, 182, 535, 989, 1071, 1303, 1479, 1545, 2213
BspFNI	CGCG	2 cut(s)	193, 213
BspMAI	CTGCAG	1 cut(s)	2151
BspMI	ACCTGC	2 cut(s)	1630, 2140
BspT107I	GGYRCC	1 cut(s)	584
BspTNI	GGTCTC	1 cut(s)	28
BsrFI	RCCGGY	2 cut(s)	158, 373
BsrI	ACTGG	4 cut(s)	91, 425, 1163, 1261
BssAI	RCCGGY	2 cut(s)	158, 373
BssMI	GATC	6 cut(s)	13, 127, 234, 322, 658, 1820
BssNI	GRCGYC	1 cut(s)	1558
BssT1I	CCWWGG	7 cut(s)	61, 148, 329, 500, 523, 566, 1109
Bst4CI	ACNGT	5 cut(s)	416, 605, 619, 675, 1750
Bst6I	CTCTTC	2 cut(s)	85, 520
BstACI	GRCGYC	1 cut(s)	1558
BstAPI	GCANNNNNTGC	2 cut(s)	238, 2182
BstBAI	YACGTR	1 cut(s)	896
BstC8I	GCNNGC	7 cut(s)	9, 160, 1464, 1600, 1653, 2178, 2215
BstDSI	CCRYGG	2 cut(s)	148, 566
BstENI	CCTNNNNNAGG	1 cut(s)	1326
BstF5I	GGATG	4 cut(s)	1138, 1883, 1970, 2113
BstFNI	CGCG	2 cut(s)	193, 213
BstH2I	RGCGCY	1 cut(s)	165
BstHHI	GCGC	5 cut(s)	164, 411, 1149, 1639, 1870
BstKTI	GATC	6 cut(s)	16, 130, 237, 325, 661, 1823
BstMAI	GTCTC	2 cut(s)	28, 428
BstMBI	GATC	6 cut(s)	13, 127, 234, 322, 658, 1820
BstMCI	CGRYCG	2 cut(s)	49, 1072
BstSFI	CTRYAG	2 cut(s)	1632, 2147
BstSLI	GKGCMC	2 cut(s)	508, 1305
BstSNI	TACGTA	1 cut(s)	896
BstUI	CGCG	2 cut(s)	193, 213
BstV1I	GCAGC	3 cut(s)	16, 253, 1471
BstV2I	GAAGAC	2 cut(s)	87, 620
BstX2I	RGATCY	2 cut(s)	234, 1820
BstYI	RGATCY	2 cut(s)	234, 1820
BstZI	CGGCCG	1 cut(s)	1069
Bsu36I	CCTNAGG	2 cut(s)	1530, 1839
BsuI	GTATCC	1 cut(s)	621
BsuRI	GGCC	9 cut(s)	158, 182, 535, 989, 1071, 1303, 1479, 1545, 2213
BtgI	CCRYGG	2 cut(s)	148, 566
BtrI	CACGTC	1 cut(s)	1046
BtsCI	GGATG	4 cut(s)	1138, 1883, 1970, 2113
BtsIMutI	CAGTG	3 cut(s)	1204, 1623, 1780
BtuMI	TCGCGA	1 cut(s)	193
BveI	ACCTGC	2 cut(s)	1630, 2140
Cac8I	GCNNGC	7 cut(s)	9, 160, 1464, 1600, 1653, 2178, 2215
CaiI	CAGNNNCTG	1 cut(s)	431
CfoI	GCGC	5 cut(s)	164, 411, 1149, 1639, 1870
Cfr10I	RCCGGY	2 cut(s)	158, 373
Cfr13I	GGNCC	9 cut(s)	65, 156, 262, 533, 562, 601, 1301, 1302, 1477
Cfr9I	CCCGGG	1 cut(s)	1298
CseI	GACGC	2 cut(s)	131, 1566
CsiI	ACCWGGT	2 cut(s)	37, 1321
Csp6I	GTAC	7 cut(s)	220, 585, 897, 1063, 1278, 1290, 1881
CviAII	CATG	3 cut(s)	149, 567, 1123
CviQI	GTAC	7 cut(s)	220, 585, 897, 1063, 1278, 1290, 1881
DpnI	GATC	6 cut(s)	15, 129, 236, 324, 660, 1822
DpnII	GATC	6 cut(s)	13, 127, 234, 322, 658, 1820
DrdI	GACNNNNNNGTC	1 cut(s)	63
DseDI	GACNNNNNNGTC	1 cut(s)	63
EaeI	YGGCCR	1 cut(s)	1069
EagI	CGGCCG	1 cut(s)	1069
Eam1104I	CTCTTC	2 cut(s)	85, 520
EarI	CTCTTC	2 cut(s)	85, 520
EciI	GGCGGA	1 cut(s)	76
Ecl136II	GAGCTC	1 cut(s)	929
EclXI	CGGCCG	1 cut(s)	1069
Eco105I	TACGTA	1 cut(s)	896
Eco130I	CCWWGG	7 cut(s)	61, 148, 329, 500, 523, 566, 1109
Eco147I	AGGCCT	1 cut(s)	2213
Eco24I	GRGCYC	2 cut(s)	931, 1305
Eco31I	GGTCTC	1 cut(s)	28
Eco47I	GGWCC	4 cut(s)	65, 262, 562, 601
Eco52I	CGGCCG	1 cut(s)	1069
Eco53kI	GAGCTC	1 cut(s)	929
Eco57I	CTGAAG	2 cut(s)	339, 954
Eco81I	CCTNAGG	2 cut(s)	1530, 1839
Eco88I	CYCGRG	2 cut(s)	1298, 1913
EcoICRI	GAGCTC	1 cut(s)	929
EcoNI	CCTNNNNNAGG	1 cut(s)	1326
EcoO109I	RGGNCCY	4 cut(s)	262, 533, 562, 1302
EcoT14I	CCWWGG	7 cut(s)	61, 148, 329, 500, 523, 566, 1109
EcoT22I	ATGCAT	1 cut(s)	1981
EcoT38I	GRGCYC	2 cut(s)	931, 1305
ErhI	CCWWGG	7 cut(s)	61, 148, 329, 500, 523, 566, 1109
FaeI	CATG	3 cut(s)	152, 570, 1126
FaqI	GGGAC	3 cut(s)	129, 248, 548
FatI	CATG	3 cut(s)	148, 566, 1122
FauI	CCCGC	1 cut(s)	146
FauNDI	CATATG	1 cut(s)	992
FbaI	TGATCA	1 cut(s)	13
FblI	GTMKAC	2 cut(s)	55, 681
Fnu4HI	GCNGC	4 cut(s)	5, 242, 833, 1460
FokI	GGATG	4 cut(s)	1145, 1870, 1977, 2120
FriOI	GRGCYC	2 cut(s)	931, 1305
Fsp4HI	GCNGC	4 cut(s)	5, 242, 833, 1460
FspBI	CTAG	9 cut(s)	104, 225, 548, 576, 1251, 1368, 1563, 1656, 2230
GlaI	GCGC	5 cut(s)	163, 410, 1148, 1638, 1869
GluI	GCNGC	4 cut(s)	5, 242, 833, 1460
GsaI	CCCAGC	2 cut(s)	168, 1470
GsuI	CTGGAG	4 cut(s)	408, 1692, 1809, 1892
HaeII	RGCGCY	1 cut(s)	165
HaeIII	GGCC	9 cut(s)	158, 182, 535, 989, 1071, 1303, 1479, 1545, 2213
HapII	CCGG	7 cut(s)	159, 183, 374, 400, 724, 1299, 1426
HgaI	GACGC	2 cut(s)	131, 1566
HhaI	GCGC	5 cut(s)	164, 411, 1149, 1639, 1870
Hin1I	GRCGYC	1 cut(s)	1558
Hin1II	CATG	3 cut(s)	152, 570, 1126
Hin6I	GCGC	5 cut(s)	162, 409, 1147, 1637, 1868
HinP1I	GCGC	5 cut(s)	162, 409, 1147, 1637, 1868
HindIII	AAGCTT	1 cut(s)	1907
HinfI	GANTC	8 cut(s)	57, 77, 188, 683, 1033, 1225, 2189, 2221
HpaII	CCGG	7 cut(s)	159, 183, 374, 400, 724, 1299, 1426
HphI	GGTGA	7 cut(s)	622, 1192, 1454, 1522, 1802, 2045, 2095
Hpy166II	GTNNAC	7 cut(s)	56, 222, 355, 682, 1019, 1513, 1556
Hpy188I	TCNGA	6 cut(s)	127, 287, 595, 736, 2124, 2203
Hpy188III	TCNNGA	9 cut(s)	192, 206, 431, 687, 778, 932, 1130, 1683, 1913
Hpy8I	GTNNAC	7 cut(s)	56, 222, 355, 682, 1019, 1513, 1556
Hpy99I	CGWCG	2 cut(s)	420, 1050
HpyAV	CCTTC	5 cut(s)	573, 1315, 1927, 2092, 2178
HpyCH4III	ACNGT	5 cut(s)	416, 605, 619, 675, 1750
HpyCH4IV	ACGT	4 cut(s)	865, 895, 1045, 1237
HpyCH4V	TGCA	9 cut(s)	4, 241, 341, 1459, 1576, 1673, 1979, 2141, 2149
HpySE526I	ACGT	4 cut(s)	865, 895, 1045, 1237
Hsp92I	GRCGYC	1 cut(s)	1558
Hsp92II	CATG	3 cut(s)	152, 570, 1126
HspAI	GCGC	5 cut(s)	162, 409, 1147, 1637, 1868
KpnI	GGTACC	1 cut(s)	588
KroI	GCCGGC	1 cut(s)	158
KroNI	GCCGGC	1 cut(s)	160
Ksp22I	TGATCA	1 cut(s)	13
Kzo9I	GATC	6 cut(s)	13, 127, 234, 322, 658, 1820
Lsp1109I	GCAGC	3 cut(s)	16, 253, 1471
LweI	GCATC	5 cut(s)	1329, 1365, 1473, 1988, 2207
MabI	ACCWGGT	2 cut(s)	37, 1321
MaeI	CTAG	9 cut(s)	104, 225, 548, 576, 1251, 1368, 1563, 1656, 2230
MaeII	ACGT	4 cut(s)	865, 895, 1045, 1237
MaeIII	GTNAC	3 cut(s)	206, 1524, 1949
MalI	GATC	6 cut(s)	15, 129, 236, 324, 660, 1822
MboI	GATC	6 cut(s)	13, 127, 234, 322, 658, 1820
MfeI	CAATTG	2 cut(s)	784, 1405
MflI	RGATCY	2 cut(s)	234, 1820
MhlI	GDGCHC	5 cut(s)	424, 508, 931, 1305, 1591
MlyI	GAGTC	4 cut(s)	51, 71, 677, 2230
MmeI	TCCRAC	4 cut(s)	543, 1176, 1335, 2041
Mph1103I	ATGCAT	1 cut(s)	1981
MroNI	GCCGGC	1 cut(s)	158
MseI	TTAA	7 cut(s)	177, 621, 666, 917, 1905, 2051, 2076
MslI	CAYNNNNRTG	1 cut(s)	1801
MspA1I	CMGCKG	1 cut(s)	1466
MspI	CCGG	7 cut(s)	159, 183, 374, 400, 724, 1299, 1426
MunI	CAATTG	2 cut(s)	784, 1405
MvnI	CGCG	2 cut(s)	193, 213
NaeI	GCCGGC	1 cut(s)	160
NciI	CCSGG	5 cut(s)	401, 724, 1299, 1300, 1426
NcoI	CCATGG	2 cut(s)	148, 566
NdeI	CATATG	1 cut(s)	992
NdeII	GATC	6 cut(s)	13, 127, 234, 322, 658, 1820
NgoMIV	GCCGGC	1 cut(s)	158
NlaIII	CATG	3 cut(s)	152, 570, 1126
NmeAIII	GCCGAG	1 cut(s)	677
NmuCI	GTSAC	2 cut(s)	206, 1949
NruI	TCGCGA	1 cut(s)	193
NsiI	ATGCAT	1 cut(s)	1981
PaeR7I	CTCGAG	1 cut(s)	1913
PceI	AGGCCT	1 cut(s)	2213
PdiI	GCCGGC	1 cut(s)	160
PfeI	GAWTC	4 cut(s)	188, 1033, 1225, 2189
PflFI	GACNNNGTC	1 cut(s)	1426
PflMI	CCANNNNNTGG	2 cut(s)	1158, 1493
PfoI	TCCNGGA	1 cut(s)	1360
PkrI	GCNGC	4 cut(s)	6, 243, 834, 1461
PleI	GAGTC	4 cut(s)	51, 71, 677, 2229
PpsI	GAGTC	4 cut(s)	51, 71, 677, 2229
Ppu21I	YACGTR	1 cut(s)	896
PpuMI	RGGWCCY	2 cut(s)	262, 562
PshBI	ATTAAT	1 cut(s)	2051
PsiI	TTATAA	1 cut(s)	278
Psp124BI	GAGCTC	1 cut(s)	931
Psp5II	RGGWCCY	2 cut(s)	262, 562
PspFI	CCCAGC	2 cut(s)	164, 1466
PspOMI	GGGCCC	1 cut(s)	1301
PspPI	GGNCC	9 cut(s)	65, 156, 262, 533, 562, 601, 1301, 1302, 1477
PspPPI	RGGWCCY	2 cut(s)	262, 562
PsrI	GAACNNNNNNTAC	2 cut(s)	1626, 1658
PstI	CTGCAG	1 cut(s)	2151
PstNI	CAGNNNCTG	1 cut(s)	431
PsuI	RGATCY	2 cut(s)	234, 1820
PsyI	GACNNNGTC	1 cut(s)	1426
PvuII	CAGCTG	1 cut(s)	1466
RruI	TCGCGA	1 cut(s)	193
RsaI	GTAC	7 cut(s)	221, 586, 898, 1064, 1279, 1291, 1882
RsaNI	GTAC	7 cut(s)	220, 585, 897, 1063, 1278, 1290, 1881
RseI	CAYNNNNRTG	1 cut(s)	1801
SacI	GAGCTC	1 cut(s)	931
SaqAI	TTAA	7 cut(s)	177, 621, 666, 917, 1905, 2051, 2076
SatI	GCNGC	4 cut(s)	5, 242, 833, 1460
Sau3AI	GATC	6 cut(s)	13, 127, 234, 322, 658, 1820
Sau96I	GGNCC	9 cut(s)	65, 156, 262, 533, 562, 601, 1301, 1302, 1477
SchI	GAGTC	4 cut(s)	51, 71, 677, 2230
SduI	GDGCHC	5 cut(s)	424, 508, 931, 1305, 1591
SexAI	ACCWGGT	2 cut(s)	37, 1321
SfaNI	GCATC	5 cut(s)	1329, 1365, 1473, 1988, 2207
SfcI	CTRYAG	2 cut(s)	1632, 2147
Sfr274I	CTCGAG	1 cut(s)	1913
SinI	GGWCC	4 cut(s)	65, 262, 562, 601
SlaI	CTCGAG	1 cut(s)	1913
SmaI	CCCGGG	1 cut(s)	1300
SmiMI	CAYNNNNRTG	1 cut(s)	1801
SmlI	CTYRAG	3 cut(s)	31, 1281, 1913
SmoI	CTYRAG	3 cut(s)	31, 1281, 1913
SnaBI	TACGTA	1 cut(s)	896
SseBI	AGGCCT	1 cut(s)	2213
SsiI	CCGC	5 cut(s)	45, 87, 153, 211, 832
SspI	AATATT	1 cut(s)	1769
SspMI	CTAG	9 cut(s)	104, 225, 548, 576, 1251, 1368, 1563, 1656, 2230
SstI	GAGCTC	1 cut(s)	931
StuI	AGGCCT	1 cut(s)	2213
StyI	CCWWGG	7 cut(s)	61, 148, 329, 500, 523, 566, 1109
TaaI	ACNGT	5 cut(s)	416, 605, 619, 675, 1750
TaiI	ACGT	4 cut(s)	868, 898, 1048, 1240
TaqI	TCGA	2 cut(s)	75, 1914
TatI	WGTACW	3 cut(s)	219, 1062, 1880
TauI	GCSGC	1 cut(s)	835
TfiI	GAWTC	4 cut(s)	188, 1033, 1225, 2189
Tru1I	TTAA	7 cut(s)	177, 621, 666, 917, 1905, 2051, 2076
Tru9I	TTAA	7 cut(s)	177, 621, 666, 917, 1905, 2051, 2076
TscAI	CASTG	3 cut(s)	1204, 1630, 1780
TseFI	GTSAC	2 cut(s)	206, 1949
TseI	GCWGC	3 cut(s)	4, 241, 1459
Tsp45I	GTSAC	2 cut(s)	206, 1949
TspDTI	ATGAA	3 cut(s)	285, 1111, 1746
TspGWI	ACGGA	1 cut(s)	401
TspMI	CCCGGG	1 cut(s)	1298
TspRI	CASTG	3 cut(s)	1204, 1630, 1780
Tth111I	GACNNNGTC	1 cut(s)	1426
Van91I	CCANNNNNTGG	2 cut(s)	1158, 1493
VpaK11BI	GGWCC	4 cut(s)	65, 262, 562, 601
VspI	ATTAAT	1 cut(s)	2051
XagI	CCTNNNNNAGG	1 cut(s)	1326
XapI	RAATTY	1 cut(s)	1782
XhoI	CTCGAG	1 cut(s)	1913
XmaI	CCCGGG	1 cut(s)	1298
XmiI	GTMKAC	2 cut(s)	55, 681
XspI	CTAG	9 cut(s)	104, 225, 548, 576, 1251, 1368, 1563, 1656, 2230
Zsp2I	ATGCAT	1 cut(s)	1981

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.