Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0001955

Physical Location & Seq

Genomic Coordinates Forward (+)

18453199 .. 18458596

Gene Structure 5398 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g26620.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGTACACCTTCATGTTTAATTTTGTCAAGGAACAAAATGACTTGGGTGCAAAGCTGTTTCTGGCATGGGCAGGATGGGTATGTGTATGGACAGCAGGGTTGCTGTTCTTATTGGCTATTTTGGGTGCTTGTTCCATTATCAACAGGTTCACCCGTATAGCTGGAGAACTGTTTGGCCTCCTTATTGCTATGCTCTTCATGCAGCAAGCCATAAAAGGACTTGTGGAGGAGTTTCGCATACCACAAAGAGAAGATACAAGTTTAGCGCAGTTTATGCCTTCATGGAGGTTCGCAAATGGGATGTTTGCTTTGGTATTGTCATTTGGCCTTCTTCTCACTGCTTTAAAAAGTCGGAAAGCAAGGTCTTGGCGCTATGGCTCCGGTTCTCTTAGAGGCTTCATAGCAGATTATGGAGTGCCACTTATGGTTCTAGTCTGGACTGGTGTATCTTACATACCAACTAGTAGTGTTCCAAAAGGAATCCCACGACGGCTCTTTAGCCCAAATCCATGGTCACCTGGTGCATATGAGAATTGGACTGTCATTAAGCAAATGCTTGATGTTCCAATCCTGTACATCATTGGAGCTTTCATTCCAGCCACAATGATTGCAGTGCTTTATTATTTCGACCACAGTGTAGCATCCCAACTTGCTCAGCAGAAAGAGTTCAATTTGAGAAAGCCATCGTCTTACCATTATGACTTGCTTCTTTTGGGGTTTCTGACCTTAATGTGTGGTCTGCTAGGAATTCCTCCATCAAATGGTGTCATTCCACAGTCTCCGATGCATACTAAGAGTTTGGCTACTCTTAAACATCAGTTGCTACGTAATAAGCTTGTAGCAACAGCACGGAAAAGTATGCGAAAGAATGCTAGCTTGGGACAGCTGTATGGAAATATGCAAGAAGCCTATCATCAAATGCAGACTCCTTTGGTTTACCAGAGTGCCTCGTCTCTGGGACTGAATGAGTTAAAAGAATCAACTATCCAGGCAGCTTCAAGTATGGGAAACTATATTGATGCGCCAGTTGATGATACAGTGTTTGATGTAGAGAAAGAAATTGACGATCTATTGCCTGTTGAGGTGAAAGAACAGCGTCTTAGTAACATACTTCAAGCTGTACTGGTTGGAGCATGTGTTGCAGCCATGCCTATACTAAAAAAGATCCCAACATCAGTCCTCTGGGGCTACTTCGCTTTCATGGCCATTGAAAGCTTACCGGGTAACCAATTTTGGGAAAGGATCTTATTGCTCTTTACTGCTCCCAGTAGAAGATACAAAGTCCTCGAGGAGTACCATGCAACTTTTGTAGAAACTGTGCCTTTCAAGACAATTGTGATGTTTACAATTTTCCAAACTGTGTACTTGCTTATATGTTTTGGGCTTACTTGGGTTCCAATTGCCGGGGTCATGTTTCCTTTGATGATCATGCTTTTGGTCCCTGTGAGACAATACTTTCTGCCCAAGTTTTTCAAAGGAGCTCATCTTCAGGACTTGGATGCAGCAGAGTATGAAGAGGCTCCAGCTTTACCATTTAATCTTGCAGCGGAGACAGAGCTGGGAGCTGGAGCTTCCTGTGCTGGAGATGCAGAAATACTAGATGACGCTTTTACCCGTAGCAGAGGTGAGTTTAAGCATGTGAGCAGTCCTAAGATCACAAGTACAACTTCAACACCGGCAAATGCCCCTAGAAGCCTCGAGAGTCCACGTGTCTCCTTCAGTCCGCGAATCAGTGAGCTAAGAGGAGTGCCAAGTCCTCGTTCTGGTGGAAGAGGGCCGCATAGTCCAAAGACTGGAGAAGTGAAGCCTTCCATTCTGGGAAAGAGCCTTAGTAAGAGCAACTCGACATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006873 GO:0006885 GO:0007275 GO:0008150 GO:0009987 GO:0016020 GO:0016021 GO:0019725 GO:0022622 GO:0030003 GO:0030004 GO:0030641 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0042592 GO:0044425 GO:0044459 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HCO3_cotransp

Protein Analysis

618

Amino Acids

68.47

Weight (kDa)

9.17

Isoelectric Point (pI)

42.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HCO3_cotransp	PF00955	8 - 180	2e-33	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	199 - 372	1.4e-24	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	461 - 603	1.8e-30	HCO3- transporter integral membrane domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47160 AT2G47160 AT3G62270
fragaria_vesca	FvH4_1g26620 FvH4_1g26620 FvH4_1g26620 FvH4_1g26620 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400
malus_domestica	MD06G1173100.v1.1 MD09G1287700.v1.1 MD14G1179400.v1.1 MD17G1279900.v1.1
prunus_persica	Prupe.3G005600_v2.0.a1 Prupe.5G172600_v2.0.a1
pyrus_communis	pycom06g15420 pycom14g14930 pycom14g14940
rosa_chinensis	RchiOBHm_Chr3g0486761 RchiOBHm_Chr7g0193431
rosa_laevigata	RLG00000004268 RLG00000023062
rosa_multiflora	Rmu_sc0006629.1_g000001 Rmu_sc0012783.1_g000009 Rmu_sc0013001.1_g000011
rosa_roxburghii	Rroxscaffold_3G00262090 Rroxscaffold_6G00395610
rosa_rugosa	Rorug03G0227000 Rorug03G0227100 Rorug07G0009500
rosa_samantha	Rh3AG276900 Rh3BG311800 Rh3CG311000 Rh3DG307500 Rh7AG136100 Rh7BG136500 Rh7CG140000 Rh7DG137800
rosa_wichuraiana	Rw3G024620 Rw7G011610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1286
AccB7I	CCANNNNNTGG	2 cut(s)	761, 1793
AccII	CGCG	1 cut(s)	1726
AciI	CCGC	3 cut(s)	1547, 1724, 1778
AclWI	GGATC	2 cut(s)	1159, 1250
AcoI	YGGCCR	1 cut(s)	1203
AcsI	RAATTY	1 cut(s)	747
AcuI	CTGAAG	2 cut(s)	1472, 1702
AcvI	CACGTG	1 cut(s)	1709
AdeI	CACNNNGTG	1 cut(s)	521
AfaI	GTAC	6 cut(s)	5, 575, 1122, 1295, 1364, 1663
AfiI	CCNNNNNNNGG	5 cut(s)	761, 1234, 1403, 1763, 1793
AflIII	ACRYGT	1 cut(s)	1708
AgsI	TTSAA	7 cut(s)	670, 999, 1115, 1211, 1327, 1474, 1671
AhlI	ACTAGT	1 cut(s)	461
AjnI	CCWGG	2 cut(s)	517, 987
AjuI	GAANNNNNNNTTGG	4 cut(s)	860, 892, 1744, 1776
Alw21I	GWGCWC	1 cut(s)	1483
Alw26I	GTCTC	5 cut(s)	783, 957, 1441, 1544, 1717
AlwI	GGATC	2 cut(s)	1159, 1250
Ama87I	CYCGRG	2 cut(s)	1286, 1697
AoxI	GGCC	4 cut(s)	175, 325, 1203, 1775
ApeKI	GCWGC	5 cut(s)	202, 992, 1142, 1502, 1544
ApoI	RAATTY	1 cut(s)	747
ArsI	GACNNNNNNTTYG	2 cut(s)	497, 529
Asp700I	GAANNNNTTC	1 cut(s)	665
AspLEI	GCGC	3 cut(s)	268, 372, 1024
AspS9I	GGNCC	2 cut(s)	1438, 1775
AsuC2I	CCSGG	2 cut(s)	1221, 1405
AsuHPI	GGTGA	4 cut(s)	142, 507, 1096, 1637
AsuNHI	GCTAGC	1 cut(s)	872
AvaI	CYCGRG	2 cut(s)	1286, 1697
AvaII	GGWCC	1 cut(s)	1438
BaeI	ACNNNNGTAYC	2 cut(s)	429, 462
BalI	TGGCCA	1 cut(s)	1205
BanII	GRGCYC	1 cut(s)	1483
BbrPI	CACGTG	1 cut(s)	1709
Bbv12I	GWGCWC	1 cut(s)	1483
BbvI	GCAGC	5 cut(s)	214, 1004, 1154, 1514, 1556
BccI	CCATC	3 cut(s)	69, 691, 763
BceAI	ACGGC	1 cut(s)	506
BciT130I	CCWGG	2 cut(s)	519, 989
BclI	TGATCA	1 cut(s)	1425
BcnI	CCSGG	2 cut(s)	1221, 1405
BcoDI	GTCTC	5 cut(s)	783, 957, 1441, 1544, 1717
BcuI	ACTAGT	1 cut(s)	461
BfaI	CTAG	6 cut(s)	431, 462, 743, 873, 1598, 1689
BfoI	RGCGCY	1 cut(s)	373
BisI	GCNGC	6 cut(s)	203, 993, 1143, 1503, 1545, 1778
BlpI	GCTNAGC	1 cut(s)	654
BlsI	GCNGC	6 cut(s)	204, 994, 1144, 1504, 1546, 1779
Bme1390I	CCNGG	4 cut(s)	519, 989, 1221, 1405
Bme18I	GGWCC	1 cut(s)	1438
BmeT110I	CYCGRG	2 cut(s)	1286, 1697
BmgT120I	GGNCC	2 cut(s)	1438, 1775
BmiI	GGNNCC	4 cut(s)	379, 1395, 1440, 1521
BmrFI	CCNGG	4 cut(s)	519, 989, 1221, 1405
BmrI	ACTGGG	1 cut(s)	1260
BmsI	GCATC	5 cut(s)	650, 774, 1009, 1489, 1576
BmtI	GCTAGC	1 cut(s)	876
BmuI	ACTGGG	1 cut(s)	1260
BpmI	CTGGAG	5 cut(s)	183, 1506, 1587, 1602, 1815
Bpu1102I	GCTNAGC	1 cut(s)	654
BpuMI	CCSGG	2 cut(s)	1221, 1405
BsaAI	YACGTR	2 cut(s)	827, 1709
BsaJI	CCNNGG	2 cut(s)	509, 1404
BsaWI	WCCGGW	1 cut(s)	380
BsaXI	ACNNNNNCTCC	2 cut(s)	1122, 1152
Bsc4I	CCNNNNNNNGG	5 cut(s)	761, 1234, 1403, 1763, 1793
Bse118I	RCCGGY	1 cut(s)	1675
Bse1I	ACTGG	5 cut(s)	445, 1025, 1128, 1266, 1798
BseBI	CCWGG	2 cut(s)	519, 989
BseDI	CCNNGG	2 cut(s)	509, 1404
BseGI	GGATG	4 cut(s)	80, 306, 641, 1504
BseLI	CCNNNNNNNGG	5 cut(s)	761, 1234, 1403, 1763, 1793
BseMII	CTCAG	1 cut(s)	668
BseNI	ACTGG	5 cut(s)	445, 1025, 1128, 1266, 1798
BseRI	GAGGAG	3 cut(s)	242, 1304, 1758
BseXI	GCAGC	5 cut(s)	214, 1004, 1154, 1514, 1556
BseYI	CCCAGC	1 cut(s)	1558
Bsh1236I	CGCG	1 cut(s)	1726
BshFI	GGCC	4 cut(s)	177, 327, 1205, 1777
BsiHKAI	GWGCWC	1 cut(s)	1483
BsiHKCI	CYCGRG	2 cut(s)	1286, 1697
BsiSI	CCGG	4 cut(s)	381, 1220, 1404, 1676
BslFI	GGGAC	3 cut(s)	894, 972, 1424
BslI	CCNNNNNNNGG	5 cut(s)	761, 1234, 1403, 1763, 1793
BsmAI	GTCTC	5 cut(s)	783, 957, 1441, 1544, 1717
BsmBI	CGTCTC	1 cut(s)	957
BsmFI	GGGAC	3 cut(s)	894, 972, 1424
BsmI	GAATGC	1 cut(s)	874
BsnI	GGCC	4 cut(s)	177, 327, 1205, 1777
BsoBI	CYCGRG	2 cut(s)	1286, 1697
Bsp1286I	GDGCHC	1 cut(s)	1483
Bsp1407I	TGTACA	2 cut(s)	3, 573
Bsp143I	GATC	5 cut(s)	1066, 1164, 1242, 1425, 1653
Bsp1720I	GCTNAGC	1 cut(s)	654
Bsp19I	CCATGG	1 cut(s)	509
BspACI	CCGC	3 cut(s)	1547, 1724, 1778
BspANI	GGCC	4 cut(s)	177, 327, 1205, 1777
BspCNI	CTCAG	1 cut(s)	667
BspFNI	CGCG	1 cut(s)	1726
BspLI	GGNNCC	4 cut(s)	379, 1395, 1440, 1521
BspOI	GCTAGC	1 cut(s)	876
BspPI	GGATC	2 cut(s)	1159, 1250
BspQI	GCTCTTC	1 cut(s)	200
BsrFI	RCCGGY	1 cut(s)	1675
BsrGI	TGTACA	2 cut(s)	3, 573
BsrI	ACTGG	5 cut(s)	445, 1025, 1128, 1266, 1798
BssAI	RCCGGY	1 cut(s)	1675
BssECI	CCNNGG	2 cut(s)	509, 1404
BssMI	GATC	5 cut(s)	1066, 1164, 1242, 1425, 1653
BssT1I	CCWWGG	1 cut(s)	509
Bst2UI	CCWGG	2 cut(s)	519, 989
Bst4CI	ACNGT	7 cut(s)	171, 541, 635, 777, 1039, 1318, 1360
Bst6I	CTCTTC	3 cut(s)	200, 1509, 1765
BstAPI	GCANNNNNTGC	2 cut(s)	274, 1139
BstAUI	TGTACA	2 cut(s)	3, 573
BstBAI	YACGTR	2 cut(s)	827, 1709
BstC8I	GCNNGC	2 cut(s)	207, 874
BstDEI	CTNAG	7 cut(s)	389, 654, 792, 1100, 1650, 1739, 1829
BstDSI	CCRYGG	1 cut(s)	509
BstEII	GGTNACC	2 cut(s)	513, 1223
BstF5I	GGATG	4 cut(s)	80, 306, 641, 1504
BstFNI	CGCG	1 cut(s)	1726
BstH2I	RGCGCY	1 cut(s)	373
BstHHI	GCGC	3 cut(s)	268, 372, 1024
BstKTI	GATC	5 cut(s)	1069, 1167, 1245, 1428, 1656
BstMAI	GTCTC	5 cut(s)	783, 957, 1441, 1544, 1717
BstMBI	GATC	5 cut(s)	1066, 1164, 1242, 1425, 1653
BstMWI	GCNNNNNNNGC	6 cut(s)	199, 274, 1139, 1202, 1577, 1586
BstNI	CCWGG	2 cut(s)	519, 989
BstNSI	RCATGY	2 cut(s)	1137, 1640
BstPI	GGTNACC	2 cut(s)	513, 1223
BstSCI	CCNGG	4 cut(s)	517, 987, 1219, 1403
BstSNI	TACGTA	1 cut(s)	827
BstUI	CGCG	1 cut(s)	1726
BstV1I	GCAGC	5 cut(s)	214, 1004, 1154, 1514, 1556
BstX2I	RGATCY	2 cut(s)	1164, 1242
BstXI	CCANNNNNNTGG	1 cut(s)	510
BstYI	RGATCY	2 cut(s)	1164, 1242
BsuRI	GGCC	4 cut(s)	177, 327, 1205, 1777
BtgI	CCRYGG	1 cut(s)	509
BtsCI	GGATG	4 cut(s)	80, 306, 641, 1504
BtsI	GCAGTG	2 cut(s)	336, 618
BtsIMutI	CAGTG	5 cut(s)	336, 618, 640, 1044, 1738
Cac8I	GCNNGC	2 cut(s)	207, 874
CfoI	GCGC	3 cut(s)	268, 372, 1024
Cfr10I	RCCGGY	1 cut(s)	1675
Cfr13I	GGNCC	2 cut(s)	1438, 1775
CseI	GACGC	2 cut(s)	1085, 1613
CsiI	ACCWGGT	1 cut(s)	517
Csp6I	GTAC	6 cut(s)	4, 574, 1121, 1294, 1363, 1662
CspCI	CAANNNNNGTGG	2 cut(s)	589, 624
CviQI	GTAC	6 cut(s)	4, 574, 1121, 1294, 1363, 1662
DdeI	CTNAG	7 cut(s)	389, 654, 792, 1100, 1650, 1739, 1829
DpnI	GATC	5 cut(s)	1068, 1166, 1244, 1427, 1655
DpnII	GATC	5 cut(s)	1066, 1164, 1242, 1425, 1653
DraI	TTTAAA	1 cut(s)	345
DraIII	CACNNNGTG	1 cut(s)	521
EaeI	YGGCCR	1 cut(s)	1203
Eam1104I	CTCTTC	3 cut(s)	200, 1509, 1765
EarI	CTCTTC	3 cut(s)	200, 1509, 1765
Ecl136II	GAGCTC	1 cut(s)	1481
Eco105I	TACGTA	1 cut(s)	827
Eco130I	CCWWGG	1 cut(s)	509
Eco24I	GRGCYC	1 cut(s)	1483
Eco47I	GGWCC	1 cut(s)	1438
Eco53kI	GAGCTC	1 cut(s)	1481
Eco57I	CTGAAG	2 cut(s)	1472, 1702
Eco72I	CACGTG	1 cut(s)	1709
Eco88I	CYCGRG	2 cut(s)	1286, 1697
Eco91I	GGTNACC	2 cut(s)	513, 1223
EcoICRI	GAGCTC	1 cut(s)	1481
EcoO65I	GGTNACC	2 cut(s)	513, 1223
EcoRI	GAATTC	1 cut(s)	747
EcoRII	CCWGG	2 cut(s)	517, 987
EcoT14I	CCWWGG	1 cut(s)	509
EcoT22I	ATGCAT	1 cut(s)	789
EcoT38I	GRGCYC	1 cut(s)	1483
ErhI	CCWWGG	1 cut(s)	509
Esp3I	CGTCTC	1 cut(s)	957
FalI	AAGNNNNNCTT	2 cut(s)	1651, 1683
FaqI	GGGAC	3 cut(s)	894, 972, 1424
FauNDI	CATATG	1 cut(s)	526
FbaI	TGATCA	1 cut(s)	1425
Fnu4HI	GCNGC	6 cut(s)	203, 993, 1143, 1503, 1545, 1778
FokI	GGATG	4 cut(s)	87, 313, 628, 1511
FriOI	GRGCYC	1 cut(s)	1483
Fsp4HI	GCNGC	6 cut(s)	203, 993, 1143, 1503, 1545, 1778
FspBI	CTAG	6 cut(s)	431, 462, 743, 873, 1598, 1689
GlaI	GCGC	3 cut(s)	267, 371, 1023
GluI	GCNGC	6 cut(s)	203, 993, 1143, 1503, 1545, 1778
GsaI	CCCAGC	1 cut(s)	1562
GsuI	CTGGAG	5 cut(s)	183, 1506, 1587, 1602, 1815
HaeII	RGCGCY	1 cut(s)	373
HaeIII	GGCC	4 cut(s)	177, 327, 1205, 1777
HapII	CCGG	4 cut(s)	381, 1220, 1404, 1676
HgaI	GACGC	2 cut(s)	1085, 1613
HhaI	GCGC	3 cut(s)	268, 372, 1024
Hin6I	GCGC	3 cut(s)	266, 370, 1022
HinP1I	GCGC	3 cut(s)	266, 370, 1022
HindIII	AAGCTT	2 cut(s)	833, 1213
HinfI	GANTC	5 cut(s)	480, 925, 977, 1702, 1728
HpaII	CCGG	4 cut(s)	381, 1220, 1404, 1676
HphI	GGTGA	4 cut(s)	142, 507, 1096, 1637
Hpy166II	GTNNAC	6 cut(s)	6, 150, 937, 1344, 1363, 1706
Hpy188I	TCNGA	3 cut(s)	354, 723, 783
Hpy188III	TCNNGA	4 cut(s)	436, 1327, 1490, 1699
Hpy8I	GTNNAC	6 cut(s)	6, 150, 937, 1344, 1363, 1706
Hpy99I	CGWCG	1 cut(s)	492
HpyAV	CCTTC	5 cut(s)	19, 288, 338, 1726, 1818
HpyCH4III	ACNGT	7 cut(s)	171, 541, 635, 777, 1039, 1318, 1360
HpyCH4IV	ACGT	2 cut(s)	826, 1708
HpyF10VI	GCNNNNNNNGC	6 cut(s)	199, 274, 1139, 1202, 1577, 1586
HpyF3I	CTNAG	7 cut(s)	389, 654, 792, 1100, 1650, 1739, 1829
HpySE526I	ACGT	2 cut(s)	826, 1708
HspAI	GCGC	3 cut(s)	266, 370, 1022
Ksp22I	TGATCA	1 cut(s)	1425
Kzo9I	GATC	5 cut(s)	1066, 1164, 1242, 1425, 1653
LguI	GCTCTTC	1 cut(s)	200
LmnI	GCTCC	8 cut(s)	383, 584, 1130, 1267, 1478, 1525, 1562, 1568
Lsp1109I	GCAGC	5 cut(s)	214, 1004, 1154, 1514, 1556
LweI	GCATC	5 cut(s)	650, 774, 1009, 1489, 1576
MabI	ACCWGGT	1 cut(s)	517
MaeI	CTAG	6 cut(s)	431, 462, 743, 873, 1598, 1689
MaeII	ACGT	2 cut(s)	826, 1708
MaeIII	GTNAC	3 cut(s)	513, 1103, 1223
MalI	GATC	5 cut(s)	1068, 1166, 1244, 1427, 1655
MboI	GATC	5 cut(s)	1066, 1164, 1242, 1425, 1653
MboII	GAAGA	7 cut(s)	187, 263, 323, 1284, 1478, 1526, 1782
MfeI	CAATTG	2 cut(s)	1332, 1398
MflI	RGATCY	2 cut(s)	1164, 1242
MhlI	GDGCHC	1 cut(s)	1483
MlsI	TGGCCA	1 cut(s)	1205
MluCI	AATT	9 cut(s)	19, 532, 670, 747, 1059, 1229, 1332, 1347, 1398
MluNI	TGGCCA	1 cut(s)	1205
MlyI	GAGTC	2 cut(s)	919, 1711
MmeI	TCCRAC	2 cut(s)	332, 1108
Mox20I	TGGCCA	1 cut(s)	1205
Mph1103I	ATGCAT	1 cut(s)	789
MroXI	GAANNNNTTC	1 cut(s)	665
MscI	TGGCCA	1 cut(s)	1205
MseI	TTAA	8 cut(s)	18, 344, 546, 728, 810, 971, 1536, 1632
MslI	CAYNNNNRTG	1 cut(s)	11
Msp20I	TGGCCA	1 cut(s)	1205
MspA1I	CMGCKG	2 cut(s)	886, 1547
MspI	CCGG	4 cut(s)	381, 1220, 1404, 1676
MspR9I	CCNGG	4 cut(s)	519, 989, 1221, 1405
MunI	CAATTG	2 cut(s)	1332, 1398
Mva1269I	GAATGC	1 cut(s)	874
MvaI	CCWGG	2 cut(s)	519, 989
MvnI	CGCG	1 cut(s)	1726
MwoI	GCNNNNNNNGC	6 cut(s)	199, 274, 1139, 1202, 1577, 1586
NciI	CCSGG	2 cut(s)	1221, 1405
NcoI	CCATGG	1 cut(s)	509
NdeI	CATATG	1 cut(s)	526
NdeII	GATC	5 cut(s)	1066, 1164, 1242, 1425, 1653
NheI	GCTAGC	1 cut(s)	872
NlaIV	GGNNCC	4 cut(s)	379, 1395, 1440, 1521
NmuCI	GTSAC	1 cut(s)	513
NsiI	ATGCAT	1 cut(s)	789
NspI	RCATGY	2 cut(s)	1137, 1640
PaeR7I	CTCGAG	2 cut(s)	1286, 1697
PciSI	GCTCTTC	1 cut(s)	200
PctI	GAATGC	1 cut(s)	874
PdmI	GAANNNNTTC	1 cut(s)	665
PfeI	GAWTC	3 cut(s)	480, 977, 1728
PflMI	CCANNNNNTGG	2 cut(s)	761, 1793
PkrI	GCNGC	6 cut(s)	204, 994, 1144, 1504, 1546, 1779
PleI	GAGTC	2 cut(s)	919, 1710
PmaCI	CACGTG	1 cut(s)	1709
PmlI	CACGTG	1 cut(s)	1709
PpsI	GAGTC	2 cut(s)	919, 1710
Ppu21I	YACGTR	2 cut(s)	827, 1709
Psp124BI	GAGCTC	1 cut(s)	1483
Psp6I	CCWGG	2 cut(s)	517, 987
PspCI	CACGTG	1 cut(s)	1709
PspEI	GGTNACC	2 cut(s)	513, 1223
PspFI	CCCAGC	1 cut(s)	1558
PspGI	CCWGG	2 cut(s)	517, 987
PspN4I	GGNNCC	4 cut(s)	379, 1395, 1440, 1521
PspPI	GGNCC	2 cut(s)	1438, 1775
PspXI	VCTCGAGB	1 cut(s)	1286
PsuI	RGATCY	2 cut(s)	1164, 1242
PvuII	CAGCTG	1 cut(s)	886
RsaI	GTAC	6 cut(s)	5, 575, 1122, 1295, 1364, 1663
RsaNI	GTAC	6 cut(s)	4, 574, 1121, 1294, 1363, 1662
RseI	CAYNNNNRTG	1 cut(s)	11
SacI	GAGCTC	1 cut(s)	1483
SapI	GCTCTTC	1 cut(s)	200
SaqAI	TTAA	8 cut(s)	18, 344, 546, 728, 810, 971, 1536, 1632
SatI	GCNGC	6 cut(s)	203, 993, 1143, 1503, 1545, 1778
Sau3AI	GATC	5 cut(s)	1066, 1164, 1242, 1425, 1653
Sau96I	GGNCC	2 cut(s)	1438, 1775
SchI	GAGTC	2 cut(s)	919, 1711
ScrFI	CCNGG	4 cut(s)	519, 989, 1221, 1405
SduI	GDGCHC	1 cut(s)	1483
SexAI	ACCWGGT	1 cut(s)	517
SfaNI	GCATC	5 cut(s)	650, 774, 1009, 1489, 1576
Sfr274I	CTCGAG	2 cut(s)	1286, 1697
SinI	GGWCC	1 cut(s)	1438
SlaI	CTCGAG	2 cut(s)	1286, 1697
SmiMI	CAYNNNNRTG	1 cut(s)	11
SmlI	CTYRAG	2 cut(s)	1286, 1697
SmoI	CTYRAG	2 cut(s)	1286, 1697
SnaBI	TACGTA	1 cut(s)	827
SpeI	ACTAGT	1 cut(s)	461
Sse9I	AATT	9 cut(s)	19, 532, 670, 747, 1059, 1229, 1332, 1347, 1398
SsiI	CCGC	3 cut(s)	1547, 1724, 1778
SspMI	CTAG	6 cut(s)	431, 462, 743, 873, 1598, 1689
SstI	GAGCTC	1 cut(s)	1483
StyD4I	CCNGG	4 cut(s)	517, 987, 1219, 1403
StyI	CCWWGG	1 cut(s)	509
TaaI	ACNGT	7 cut(s)	171, 541, 635, 777, 1039, 1318, 1360
TaiI	ACGT	2 cut(s)	829, 1711
TaqI	TCGA	4 cut(s)	627, 1287, 1698, 1844
TasI	AATT	9 cut(s)	19, 532, 670, 747, 1059, 1229, 1332, 1347, 1398
TatI	WGTACW	5 cut(s)	3, 573, 1120, 1362, 1661
TauI	GCSGC	1 cut(s)	1780
TfiI	GAWTC	3 cut(s)	480, 977, 1728
Tru1I	TTAA	8 cut(s)	18, 344, 546, 728, 810, 971, 1536, 1632
Tru9I	TTAA	8 cut(s)	18, 344, 546, 728, 810, 971, 1536, 1632
TscAI	CASTG	5 cut(s)	343, 618, 640, 1044, 1738
TseFI	GTSAC	1 cut(s)	513
TseI	GCWGC	5 cut(s)	202, 992, 1142, 1502, 1544
Tsp45I	GTSAC	1 cut(s)	513
TspDTI	ATGAA	6 cut(s)	187, 270, 388, 580, 1189, 1527
TspGWI	ACGGA	1 cut(s)	865
TspRI	CASTG	5 cut(s)	343, 618, 640, 1044, 1738
Van91I	CCANNNNNTGG	2 cut(s)	761, 1793
VpaK11BI	GGWCC	1 cut(s)	1438
XapI	RAATTY	1 cut(s)	747
XceI	RCATGY	2 cut(s)	1137, 1640
XhoI	CTCGAG	2 cut(s)	1286, 1697
XmnI	GAANNNNTTC	1 cut(s)	665
XspI	CTAG	6 cut(s)	431, 462, 743, 873, 1598, 1689
Zsp2I	ATGCAT	1 cut(s)	789

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.