Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006629.1

Orthogroup ID

OG0001955

Physical Location & Seq

Genomic Coordinates Reverse (-)

3637 .. 10165

Gene Structure 6529 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006629.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2439 bp

atgttgacgacttgtcccattggtgtttgcgtcaggaggagaggccgcgggtctgctgtggtccatcgtcggccttgtcggctcttgttcggggatcggaaggctagcggcaaaggttggaggaaggtgatggcagatccggattgcggcagggattcttatcaagtgtattcactagccgacgaggcggagatgactggtgcgcattcttccttcttgggtttgagccatgactcagttggtatgccgtcgttagctcgaaccatgatgtggcccggttttgctggattgtggatcttggccccaacaacatacgtattctttgcttcaacaattccagttatatcttttggggagcagctggaaagaaatacaaatggaactttgactgcagtacagactcttgcatcaactgcaatttgtggtgttatccattcagttgttggagggcagcccctgctcatactaggggtggctgaaccaacagtattgatgtatacatttatgttcaactttgctaaggaccgaaaggatttgggacaggaactctttttagcttggactggatgggtatgtgtgtggacatccattttgctcttcttgctggccattctgggtgcttgctctataatcaataggtttacgcgtattgctggtgaattatttggtcttcttatcgcaatgctttttatgcagcaggccataagaggagttgtagaggaatttggcgtacctgaaagagaaaagccaaatcagactgcactcctaccttcttggaggtttggcaatggaatgtttgcattagttctgtcatttggccttctatttactgcattgagaagtcgtaaagctagatcgtggcgttatggcacaggttggctacgtggatttatagcggattatggagtcccacttatggttcttgtatggactgctgtatcttacataccggttaatgatgtcccaaaaggaatcccaagacgacttttcagtccaaatccatggtctcctggtgcatactcaaactggacagttatcaaggagatgatgactgttcctcctttatatatagttggagcatttataccagcaactatgattgctgtgctctactactttgatcatagtgttgcatctcaacttgcccaacagaaggagtttaatctaaagaaaccagcttcatatcactatgaccttctccttctcggatttctggtcatattgtgtgggcttattggcattccccctgccaatggtgtaattccacaatctcccatgcatacaaaaagtttagctactctaaaacatcagcttttgcggaataagcttgtagtaacagcaaggaatagtatacgcaaaaactcaactttgagtcaattataccacaacatgcaagaagcatacaatgaaatgcagactccactagtctaccaacgtccatctgctctgggactaaaagagctgaaagaatccacagtccaattagcctcaagtactggctacattgatgctcctgttgatgaaaccgtttttgatgtggataaggatattgatgatcttttacctattgaagtaaaagagcaacgcctcagcaatttgcttcaggcattgctggctggtggttgtgtagctgctatgcctcttttgaagaaaatcccaacctcagttctttggggttattttgcttttatggcaattgaaagcttgcctggaaaccaattctgggagagaatattgtttcttttcactgctccaagtcgaagatacaaggtgctggagaagtatcatggaacctttcttgagactgtgccttttaaaacaattgcgaccttcaccttgttccagacagcttacttgcttctgtgttttggcataacatggatcccaattgccggggtgctcttcccgttgttgatcatgcttctagtcccagtgcggcagtatttgctccctaagttttttaaaagggctcaccttcaagacctggatgctgcagaatacgaggaagcccctgccattgctttcaacatgtcctttgaagatcaggatgttcaggcaagaataaataacattgatggtggggagatacttgatgaaattattacaagaagccgcggggagatccgccgcactcagagtccaaaagtatcaagtttgacccctacttcttcactagaaggtataaaaccagcttatagcccaaggttaacgcagagagtatacagcccccgtttaaatgaactgagaggagaaagaagcccccgactaaatgtacaaggtcacgaaacagaaaacactcccagcccccgtttgaatgaactaagaggagaacaaagcccccgaatgcatggtcagggaatcgaaacagtgcagactcccagccctggaccatctgtcctcggacaaagcactcctggttcttcaagctacaaaacctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006873 GO:0006885 GO:0007275 GO:0008150 GO:0009987 GO:0016020 GO:0016021 GO:0019725 GO:0022622 GO:0030003 GO:0030004 GO:0030641 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0042592 GO:0044425 GO:0044459 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HCO3_cotransp

Protein Analysis

812

Amino Acids

90.47

Weight (kDa)

9.21

Isoelectric Point (pI)

43.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47160 AT2G47160 AT3G62270
fragaria_vesca	FvH4_1g26620 FvH4_1g26620 FvH4_1g26620 FvH4_1g26620 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400
malus_domestica	MD06G1173100.v1.1 MD09G1287700.v1.1 MD14G1179400.v1.1 MD17G1279900.v1.1
prunus_persica	Prupe.3G005600_v2.0.a1 Prupe.5G172600_v2.0.a1
pyrus_communis	pycom06g15420 pycom14g14930 pycom14g14940
rosa_chinensis	RchiOBHm_Chr3g0486761 RchiOBHm_Chr7g0193431
rosa_laevigata	RLG00000004268 RLG00000023062
rosa_multiflora	Rmu_sc0006629.1_g000001 Rmu_sc0012783.1_g000009 Rmu_sc0013001.1_g000011
rosa_roxburghii	Rroxscaffold_3G00262090 Rroxscaffold_6G00395610
rosa_rugosa	Rorug03G0227000 Rorug03G0227100 Rorug07G0009500
rosa_samantha	Rh3AG276900 Rh3BG311800 Rh3CG311000 Rh3DG307500 Rh7AG136100 Rh7BG136500 Rh7CG140000 Rh7DG137800
rosa_wichuraiana	Rw3G024620 Rw7G011610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	990
Acc16I	TGCGCA	1 cut(s)	204
AccB7I	CCANNNNNTGG	1 cut(s)	270
AccI	GTMKAC	4 cut(s)	497, 1351, 1428, 2220
AccII	CGCG	3 cut(s)	48, 646, 2115
AccIII	TCCGGA	1 cut(s)	139
AclWI	GGATC	6 cut(s)	102, 131, 302, 1876, 1889, 2116
AcoI	YGGCCR	1 cut(s)	606
AcsI	RAATTY	1 cut(s)	722
AcuI	CTGAAG	1 cut(s)	1586
AfaI	GTAC	4 cut(s)	396, 732, 1495, 2274
AfiI	CCNNNNNNNGG	8 cut(s)	146, 270, 916, 1153, 1253, 1723, 1892, 2384
AflIII	ACRYGT	2 cut(s)	644, 2028
AgeI	ACCGGT	1 cut(s)	949
AhdI	GACNNNNNGTC	2 cut(s)	12, 2393
AhlI	ACTAGT	1 cut(s)	1423
AjnI	CCWGG	5 cut(s)	1009, 1708, 1983, 2383, 2413
Alw21I	GWGCWC	2 cut(s)	1110, 1902
Alw26I	GTCTC	2 cut(s)	1011, 1796
AlwI	GGATC	6 cut(s)	102, 131, 302, 1876, 1889, 2116
AlwNI	CAGNNNCTG	1 cut(s)	457
Aor13HI	TCCGGA	1 cut(s)	139
AoxI	GGCC	7 cut(s)	43, 71, 272, 300, 606, 699, 817
ApeKI	GCWGC	5 cut(s)	358, 451, 694, 1631, 1991
ApoI	RAATTY	1 cut(s)	722
ArsI	GACNNNNNNTTYG	6 cut(s)	574, 606, 989, 1021, 2335, 2367
AsiGI	ACCGGT	1 cut(s)	949
AspLEI	GCGC	1 cut(s)	205
AspS9I	GGNCC	5 cut(s)	61, 273, 301, 523, 2387
AsuC2I	CCSGG	2 cut(s)	276, 1894
AsuHPI	GGTGA	4 cut(s)	139, 668, 1825, 1964
AsuNHI	GCTAGC	1 cut(s)	104
AvaII	GGWCC	3 cut(s)	61, 523, 2387
BaeI	ACNNNNGTAYC	2 cut(s)	921, 954
BalI	TGGCCA	1 cut(s)	608
BamHI	GGATCC	1 cut(s)	1881
BanII	GRGCYC	1 cut(s)	1972
BbsI	GAAGAC	1 cut(s)	662
Bbv12I	GWGCWC	2 cut(s)	1110, 1902
BbvCI	CCTCAGC	1 cut(s)	1589
BbvI	GCAGC	5 cut(s)	370, 463, 706, 1618, 1978
BccI	CCATC	6 cut(s)	72, 124, 561, 1447, 2069, 2398
BceAI	ACGGC	1 cut(s)	232
BciT130I	CCWGG	5 cut(s)	1011, 1710, 1985, 2385, 2415
BclI	TGATCA	2 cut(s)	1120, 1914
BcnI	CCSGG	2 cut(s)	276, 1894
BcoDI	GTCTC	2 cut(s)	1011, 1796
BcuI	ACTAGT	1 cut(s)	1423
BfaI	CTAG	8 cut(s)	105, 176, 467, 852, 1424, 1925, 2174, 2437
BfmI	CTRYAG	2 cut(s)	390, 1992
BglI	GCCNNNNNGGC	2 cut(s)	79, 185
BmcAI	AGTACT	1 cut(s)	1495
Bme1390I	CCNGG	7 cut(s)	276, 1011, 1710, 1894, 1985, 2385, 2415
Bme18I	GGWCC	3 cut(s)	61, 523, 2387
BmeRI	GACNNNNNGTC	2 cut(s)	12, 2393
BmgT120I	GGNCC	5 cut(s)	61, 273, 301, 523, 2387
BmiI	GGNNCC	3 cut(s)	303, 1792, 1883
BmrFI	CCNGG	7 cut(s)	276, 1011, 1710, 1894, 1985, 2385, 2415
BmrI	ACTGGG	1 cut(s)	1925
BmsI	GCATC	4 cut(s)	416, 1142, 1498, 1978
BmtI	GCTAGC	1 cut(s)	108
BmuI	ACTGGG	1 cut(s)	1925
BpiI	GAAGAC	1 cut(s)	662
BpmI	CTGGAG	1 cut(s)	1796
Bpu10I	CCTNAGC	2 cut(s)	519, 1589
BpuEI	CTTGAG	2 cut(s)	1474, 1820
BpuMI	CCSGG	2 cut(s)	276, 1894
BsaAI	YACGTR	2 cut(s)	316, 884
BsaBI	GATNNNNATC	1 cut(s)	159
BsaI	GGTCTC	1 cut(s)	1011
BsaJI	CCNNGG	7 cut(s)	46, 1001, 1893, 2113, 2201, 2383, 2398
BsaWI	WCCGGW	2 cut(s)	139, 949
BsaXI	ACNNNNNCTCC	2 cut(s)	1042, 1072
Bsc4I	CCNNNNNNNGG	8 cut(s)	146, 270, 916, 1153, 1253, 1723, 1892, 2384
Bse118I	RCCGGY	1 cut(s)	949
Bse1I	ACTGG	6 cut(s)	202, 338, 568, 1031, 1501, 1931
Bse3DI	GCAATG	4 cut(s)	687, 793, 1607, 2016
Bse8I	GATNNNNATC	1 cut(s)	159
BseAI	TCCGGA	1 cut(s)	139
BseBI	CCWGG	5 cut(s)	1011, 1710, 1985, 2385, 2415
BseDI	CCNNGG	7 cut(s)	46, 1001, 1893, 2113, 2201, 2383, 2398
BseGI	GGATG	4 cut(s)	572, 584, 1993, 2053
BseJI	GATNNNNATC	1 cut(s)	159
BseLI	CCNNNNNNNGG	8 cut(s)	146, 270, 916, 1153, 1253, 1723, 1892, 2384
BseMI	GCAATG	4 cut(s)	687, 793, 1607, 2016
BseMII	CTCAG	5 cut(s)	249, 1603, 1677, 2147, 2234
BseNI	ACTGG	6 cut(s)	202, 338, 568, 1031, 1501, 1931
BseRI	GAGGAG	4 cut(s)	52, 723, 2262, 2340
BseXI	GCAGC	5 cut(s)	370, 463, 706, 1618, 1978
BseYI	CCCAGC	2 cut(s)	2300, 2378
BsgI	GTGCAG	2 cut(s)	744, 2390
Bsh1236I	CGCG	3 cut(s)	48, 646, 2115
BshFI	GGCC	7 cut(s)	45, 73, 274, 302, 608, 701, 819
BshTI	ACCGGT	1 cut(s)	949
BsiHKAI	GWGCWC	2 cut(s)	1110, 1902
BsiSI	CCGG	4 cut(s)	140, 276, 950, 1893
BslFI	GGGAC	5 cut(s)	552, 893, 947, 1464, 1913
BslI	CCNNNNNNNGG	8 cut(s)	146, 270, 916, 1153, 1253, 1723, 1892, 2384
BsmAI	GTCTC	2 cut(s)	1011, 1796
BsmFI	GGGAC	5 cut(s)	552, 893, 947, 1464, 1913
BsmI	GAATGC	3 cut(s)	205, 1239, 2349
BsnI	GGCC	7 cut(s)	45, 73, 274, 302, 608, 701, 819
Bso31I	GGTCTC	1 cut(s)	1011
Bsp1286I	GDGCHC	3 cut(s)	1110, 1902, 1972
Bsp13I	TCCGGA	1 cut(s)	139
Bsp1407I	TGTACA	1 cut(s)	2272
Bsp19I	CCATGG	1 cut(s)	1001
BspANI	GGCC	7 cut(s)	45, 73, 274, 302, 608, 701, 819
BspCNI	CTCAG	5 cut(s)	248, 1602, 1676, 2146, 2235
BspEI	TCCGGA	1 cut(s)	139
BspFNI	CGCG	3 cut(s)	48, 646, 2115
BspLI	GGNNCC	3 cut(s)	303, 1792, 1883
BspMAI	CTGCAG	2 cut(s)	394, 1996
BspOI	GCTAGC	1 cut(s)	108
BspPI	GGATC	6 cut(s)	102, 131, 302, 1876, 1889, 2116
BspQI	GCTCTTC	2 cut(s)	602, 1907
BspTNI	GGTCTC	1 cut(s)	1011
BsrDI	GCAATG	4 cut(s)	687, 793, 1607, 2016
BsrFI	RCCGGY	1 cut(s)	949
BsrGI	TGTACA	1 cut(s)	2272
BsrI	ACTGG	6 cut(s)	202, 338, 568, 1031, 1501, 1931
BssAI	RCCGGY	1 cut(s)	949
BssECI	CCNNGG	7 cut(s)	46, 1001, 1893, 2113, 2201, 2383, 2398
BssNAI	GTATAC	3 cut(s)	498, 1352, 2221
BssT1I	CCWWGG	2 cut(s)	1001, 2201
Bst1107I	GTATAC	3 cut(s)	498, 1352, 2221
Bst2UI	CCWGG	5 cut(s)	1011, 1710, 1985, 2385, 2415
Bst4CI	ACNGT	7 cut(s)	487, 1033, 1054, 1477, 1528, 1807, 2368
Bst6I	CTCTTC	2 cut(s)	602, 1907
BstAPI	GCANNNNNTGC	3 cut(s)	413, 457, 1945
BstAUI	TGTACA	1 cut(s)	2272
BstBAI	YACGTR	2 cut(s)	316, 884
BstC8I	GCNNGC	6 cut(s)	106, 606, 622, 699, 1614, 1706
BstDEI	CTNAG	8 cut(s)	235, 519, 1589, 1663, 1953, 2133, 2243, 2321
BstDSI	CCRYGG	3 cut(s)	46, 1001, 2113
BstF5I	GGATG	4 cut(s)	572, 584, 1993, 2053
BstFNI	CGCG	3 cut(s)	48, 646, 2115
BstHHI	GCGC	1 cut(s)	205
BstMAI	GTCTC	2 cut(s)	1011, 1796
BstNI	CCWGG	5 cut(s)	1011, 1710, 1985, 2385, 2415
BstNSI	RCATGY	2 cut(s)	1393, 2032
BstSCI	CCNGG	7 cut(s)	274, 1009, 1708, 1892, 1983, 2383, 2413
BstSFI	CTRYAG	2 cut(s)	390, 1992
BstSNI	TACGTA	1 cut(s)	316
BstUI	CGCG	3 cut(s)	48, 646, 2115
BstV1I	GCAGC	5 cut(s)	370, 463, 706, 1618, 1978
BstV2I	GAAGAC	1 cut(s)	662
BstX2I	RGATCY	4 cut(s)	136, 294, 1881, 2121
BstXI	CCANNNNNNTGG	1 cut(s)	1002
BstYI	RGATCY	4 cut(s)	136, 294, 1881, 2121
BstZ17I	GTATAC	3 cut(s)	498, 1352, 2221
BsuRI	GGCC	7 cut(s)	45, 73, 274, 302, 608, 701, 819
BtgI	CCRYGG	3 cut(s)	46, 1001, 2113
BtsCI	GGATG	4 cut(s)	572, 584, 1993, 2053
BtsI	GCAGTG	1 cut(s)	1746
BtsIMutI	CAGTG	3 cut(s)	1746, 1938, 2373
Cac8I	GCNNGC	6 cut(s)	106, 606, 622, 699, 1614, 1706
CaiI	CAGNNNCTG	1 cut(s)	457
CfoI	GCGC	1 cut(s)	205
Cfr10I	RCCGGY	1 cut(s)	949
Cfr13I	GGNCC	5 cut(s)	61, 273, 301, 523, 2387
Cfr42I	CCGCGG	2 cut(s)	49, 2116
CseI	GACGC	1 cut(s)	19
Csp6I	GTAC	4 cut(s)	395, 731, 1494, 2273
CspAI	ACCGGT	1 cut(s)	949
CviQI	GTAC	4 cut(s)	395, 731, 1494, 2273
DdeI	CTNAG	8 cut(s)	235, 519, 1589, 1663, 1953, 2133, 2243, 2321
DraI	TTTAAA	3 cut(s)	1816, 1963, 2235
DrdI	GACNNNNNNGTC	1 cut(s)	990
DriI	GACNNNNNGTC	2 cut(s)	12, 2393
DseDI	GACNNNNNNGTC	1 cut(s)	990
EaeI	YGGCCR	1 cut(s)	606
Eam1104I	CTCTTC	2 cut(s)	602, 1907
Eam1105I	GACNNNNNGTC	2 cut(s)	12, 2393
EarI	CTCTTC	2 cut(s)	602, 1907
EciI	GGCGGA	2 cut(s)	203, 2114
Eco105I	TACGTA	1 cut(s)	316
Eco130I	CCWWGG	2 cut(s)	1001, 2201
Eco24I	GRGCYC	1 cut(s)	1972
Eco31I	GGTCTC	1 cut(s)	1011
Eco47I	GGWCC	3 cut(s)	61, 523, 2387
Eco57I	CTGAAG	1 cut(s)	1586
EcoRII	CCWGG	5 cut(s)	1009, 1708, 1983, 2383, 2413
EcoT14I	CCWWGG	2 cut(s)	1001, 2201
EcoT22I	ATGCAT	2 cut(s)	1281, 2349
EcoT38I	GRGCYC	1 cut(s)	1972
ErhI	CCWWGG	2 cut(s)	1001, 2201
FaqI	GGGAC	5 cut(s)	552, 893, 947, 1464, 1913
FauI	CCCGC	2 cut(s)	41, 2108
FbaI	TGATCA	2 cut(s)	1120, 1914
FblI	GTMKAC	4 cut(s)	497, 1351, 1428, 2220
FokI	GGATG	4 cut(s)	571, 579, 2000, 2060
FriOI	GRGCYC	1 cut(s)	1972
FspAI	RTGCGCAY	1 cut(s)	204
FspBI	CTAG	8 cut(s)	105, 176, 467, 852, 1424, 1925, 2174, 2437
FspI	TGCGCA	1 cut(s)	204
GlaI	GCGC	1 cut(s)	204
GsaI	CCCAGC	2 cut(s)	2304, 2382
GsuI	CTGGAG	1 cut(s)	1796
HaeIII	GGCC	7 cut(s)	45, 73, 274, 302, 608, 701, 819
HapII	CCGG	4 cut(s)	140, 276, 950, 1893
HgaI	GACGC	1 cut(s)	19
HhaI	GCGC	1 cut(s)	205
Hin6I	GCGC	1 cut(s)	203
HinP1I	GCGC	1 cut(s)	203
HincII	GTYRAC	2 cut(s)	6, 2208
HindII	GTYRAC	2 cut(s)	6, 2208
HindIII	AAGCTT	2 cut(s)	1325, 1702
HpaI	GTTAAC	1 cut(s)	2208
HpaII	CCGG	4 cut(s)	140, 276, 950, 1893
HphI	GGTGA	4 cut(s)	139, 668, 1825, 1964
Hpy166II	GTNNAC	8 cut(s)	6, 498, 582, 642, 1352, 1429, 2208, 2221
Hpy188I	TCNGA	5 cut(s)	99, 756, 1208, 2136, 2402
Hpy188III	TCNNGA	7 cut(s)	34, 140, 1799, 1843, 1979, 2045, 2282
Hpy8I	GTNNAC	8 cut(s)	6, 498, 582, 642, 1352, 1429, 2208, 2221
Hpy99I	CGWCG	3 cut(s)	72, 185, 253
HpyCH4III	ACNGT	7 cut(s)	487, 1033, 1054, 1477, 1528, 1807, 2368
HpyCH4IV	ACGT	3 cut(s)	315, 883, 1435
HpyF3I	CTNAG	8 cut(s)	235, 519, 1589, 1663, 1953, 2133, 2243, 2321
HpySE526I	ACGT	3 cut(s)	315, 883, 1435
HspAI	GCGC	1 cut(s)	203
Kpn2I	TCCGGA	1 cut(s)	139
Ksp22I	TGATCA	2 cut(s)	1120, 1914
KspAI	GTTAAC	1 cut(s)	2208
KspI	CCGCGG	2 cut(s)	49, 2116
LguI	GCTCTTC	2 cut(s)	602, 1907
LmnI	GCTCC	5 cut(s)	355, 1076, 1516, 1756, 1953
Lsp1109I	GCAGC	5 cut(s)	370, 463, 706, 1618, 1978
LweI	GCATC	4 cut(s)	416, 1142, 1498, 1978
MaeI	CTAG	8 cut(s)	105, 176, 467, 852, 1424, 1925, 2174, 2437
MaeII	ACGT	3 cut(s)	315, 883, 1435
MaeIII	GTNAC	2 cut(s)	1333, 2279
MboII	GAAGA	9 cut(s)	201, 589, 662, 1660, 1773, 1894, 2051, 2160, 2412
MfeI	CAATTG	3 cut(s)	1695, 1821, 1887
MflI	RGATCY	4 cut(s)	136, 294, 1881, 2121
MhlI	GDGCHC	3 cut(s)	1110, 1902, 1972
MlsI	TGGCCA	1 cut(s)	608
MluI	ACGCGT	1 cut(s)	644
MluNI	TGGCCA	1 cut(s)	608
MlyI	GAGTC	7 cut(s)	227, 394, 915, 1381, 1411, 2146, 2368
MmeI	TCCRAC	3 cut(s)	98, 424, 1054
Mox20I	TGGCCA	1 cut(s)	608
Mph1103I	ATGCAT	2 cut(s)	1281, 2349
MroI	TCCGGA	1 cut(s)	139
MscI	TGGCCA	1 cut(s)	608
MseI	TTAA	6 cut(s)	954, 1161, 1815, 1962, 2207, 2234
Msp20I	TGGCCA	1 cut(s)	608
MspA1I	CMGCKG	3 cut(s)	48, 361, 2115
MspI	CCGG	4 cut(s)	140, 276, 950, 1893
MspR9I	CCNGG	7 cut(s)	276, 1011, 1710, 1894, 1985, 2385, 2415
MunI	CAATTG	3 cut(s)	1695, 1821, 1887
Mva1269I	GAATGC	3 cut(s)	205, 1239, 2349
MvaI	CCWGG	5 cut(s)	1011, 1710, 1985, 2385, 2415
MvnI	CGCG	3 cut(s)	48, 646, 2115
NciI	CCSGG	2 cut(s)	276, 1894
NcoI	CCATGG	1 cut(s)	1001
NheI	GCTAGC	1 cut(s)	104
NlaIV	GGNNCC	3 cut(s)	303, 1792, 1883
NmuCI	GTSAC	1 cut(s)	2279
NsbI	TGCGCA	1 cut(s)	204
NsiI	ATGCAT	2 cut(s)	1281, 2349
NspI	RCATGY	2 cut(s)	1393, 2032
PciI	ACATGT	1 cut(s)	2028
PciSI	GCTCTTC	2 cut(s)	602, 1907
PctI	GAATGC	3 cut(s)	205, 1239, 2349
PfeI	GAWTC	4 cut(s)	155, 972, 1469, 2358
PflMI	CCANNNNNTGG	1 cut(s)	270
PinAI	ACCGGT	1 cut(s)	949
PleI	GAGTC	7 cut(s)	227, 394, 914, 1380, 1411, 2145, 2368
PpsI	GAGTC	7 cut(s)	227, 394, 914, 1380, 1411, 2145, 2368
Ppu21I	YACGTR	2 cut(s)	316, 884
PscI	ACATGT	1 cut(s)	2028
Psp6I	CCWGG	5 cut(s)	1009, 1708, 1983, 2383, 2413
PspFI	CCCAGC	2 cut(s)	2300, 2378
PspGI	CCWGG	5 cut(s)	1009, 1708, 1983, 2383, 2413
PspN4I	GGNNCC	3 cut(s)	303, 1792, 1883
PspPI	GGNCC	5 cut(s)	61, 273, 301, 523, 2387
PstI	CTGCAG	2 cut(s)	394, 1996
PstNI	CAGNNNCTG	1 cut(s)	457
PsuI	RGATCY	4 cut(s)	136, 294, 1881, 2121
PvuII	CAGCTG	1 cut(s)	361
RsaI	GTAC	4 cut(s)	396, 732, 1495, 2274
RsaNI	GTAC	4 cut(s)	395, 731, 1494, 2273
SacII	CCGCGG	2 cut(s)	49, 2116
SapI	GCTCTTC	2 cut(s)	602, 1907
SaqAI	TTAA	6 cut(s)	954, 1161, 1815, 1962, 2207, 2234
Sau96I	GGNCC	5 cut(s)	61, 273, 301, 523, 2387
ScaI	AGTACT	1 cut(s)	1495
SchI	GAGTC	7 cut(s)	227, 394, 915, 1381, 1411, 2146, 2368
ScrFI	CCNGG	7 cut(s)	276, 1011, 1710, 1894, 1985, 2385, 2415
SduI	GDGCHC	3 cut(s)	1110, 1902, 1972
SfaNI	GCATC	4 cut(s)	416, 1142, 1498, 1978
SfcI	CTRYAG	2 cut(s)	390, 1992
Sfr303I	CCGCGG	2 cut(s)	49, 2116
SgrBI	CCGCGG	2 cut(s)	49, 2116
SinI	GGWCC	3 cut(s)	61, 523, 2387
SmlI	CTYRAG	2 cut(s)	1489, 1799
SmoI	CTYRAG	2 cut(s)	1489, 1799
SnaBI	TACGTA	1 cut(s)	316
SpeI	ACTAGT	1 cut(s)	1423
SspI	AATATT	1 cut(s)	1734
SspMI	CTAG	8 cut(s)	105, 176, 467, 852, 1424, 1925, 2174, 2437
StyD4I	CCNGG	7 cut(s)	274, 1009, 1708, 1892, 1983, 2383, 2413
StyI	CCWWGG	2 cut(s)	1001, 2201
TaaI	ACNGT	7 cut(s)	487, 1033, 1054, 1477, 1528, 1807, 2368
TaiI	ACGT	3 cut(s)	318, 886, 1438
TaqI	TCGA	3 cut(s)	259, 1759, 2361
TaqII	GACCGA	1 cut(s)	540
TatI	WGTACW	3 cut(s)	394, 1493, 2272
TauI	GCSGC	6 cut(s)	48, 111, 150, 1939, 2115, 2130
TfiI	GAWTC	4 cut(s)	155, 972, 1469, 2358
Tru1I	TTAA	6 cut(s)	954, 1161, 1815, 1962, 2207, 2234
Tru9I	TTAA	6 cut(s)	954, 1161, 1815, 1962, 2207, 2234
TscAI	CASTG	3 cut(s)	1753, 1938, 2373
TseFI	GTSAC	1 cut(s)	2279
TseI	GCWGC	5 cut(s)	358, 451, 694, 1631, 1991
Tsp45I	GTSAC	1 cut(s)	2279
TspDTI	ATGAA	6 cut(s)	1170, 1422, 1536, 2109, 2253, 2331
TspRI	CASTG	3 cut(s)	1753, 1938, 2373
Van91I	CCANNNNNTGG	1 cut(s)	270
VpaK11BI	GGWCC	3 cut(s)	61, 523, 2387
XapI	RAATTY	1 cut(s)	722
XceI	RCATGY	2 cut(s)	1393, 2032
XcmI	CCANNNNNNNNNTGG	2 cut(s)	236, 440
XmiI	GTMKAC	4 cut(s)	497, 1351, 1428, 2220
XspI	CTAG	8 cut(s)	105, 176, 467, 852, 1424, 1925, 2174, 2437
ZrmI	AGTACT	1 cut(s)	1495
Zsp2I	ATGCAT	2 cut(s)	1281, 2349

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.