Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0001955

Physical Location & Seq

Genomic Coordinates Forward (+)

56197303 .. 56202873

Gene Structure 5571 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00262090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGTATACATTTATGTTCAACTTTGCTAAGGACCGAAAGGATTTGGGACAGGAACTCTTTTTAGCTTGGACTGGATGGGTATGTGTGTGGACATCCATTTTGCTCTTCTTGCTGGCCATTCTGGGTGCTTGCTCCATAATCAATAGGTTTACACGTATTGCTGGTGAATTATTTGGTCTTCTTATCGCAATGCTTTTTATGCAGCAGGCCATAAGAGGAGTTGTAGAGGAATTTGGCATACCTGAAAGAGAAAAGCCAAATCAGACTGCACTCCTACCTTCTTGGAGGTTTGGCAATGGAATGTTTGCATTAGTTCTGTCATTTGGCCTTCTATTTACTGCATTGAGAAGTCGTAAAGCTAGATCGTGGCGTTATGGCACAGGTTGGCTACGTGGATTTATAGCGGATTATGGAGTCCCACTTATGGTTCTTGTATGGACTGCTGTATCTTACATACCAGTTAATGATGTCCCAAAAGGAATCCCAAGACGACTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAACTGGACAGTTATCAAGGAGATGATGACTGTTCCTCCTTTATATATAGTTGGAGCATTTATACCAGCAACTATGATTGCTGTGCTCTACTACTTTGATCACAGTGTTGCATCTCAACTTGCCCAACAGAAGGAGTTTAATCTAAAGAAACCAGCTTCATATCACTATGACCTTCTCCTTCTCGGATTTCTGGTCATATTGTGTGGGCTTATTGGCATTCCCCCTGCCAATGGTGTAATTCCACAATCCCCTATGCATACAAAAAGCTTAGCTACTCTAAAACATCAGCTTTTGCGGAATAAGCTTGTAGTAACAGCAAGGAATAGTATACGCAAAAACTCAACTTTGAGTCAATTATACCGCAACATGCAAGAAGCATACAATGAAATGCAGACTCCACTAGTCTACCAACGTCCATCTGCTCTGGGACTAAAAGAGCTGAAAGAATCCACAGTCCAATTAGCCTCAAGTACTGGCTACATTGATGCCCCTGTTGATGAAACCGTTTTTGATGTGGATAAGGATATTGATGATCTTTTACCTATTGAAGTAAAAGAGCAACGCCTCAGCAATGTGCTTCAGGCATTGCTGGCTGGTGGTTGTGTAGCTGCTATGCCTCTTTTGAAGAAAATCCCAACCTCAGTCCTTTGGGGTTATTTTGCTTTTATGGCAATTGAAAGCTTGCCTGGAAACCAATTCTGGGAGAGAATATTGTTTCTTTTCACTGCTCCAAGTCGAAGATACAAGGTGCTGGAGAAGTATCATGGAACCTTTCTTGAGACTGTGCCTTTTAAAACAATTGCGACCTTCACCTTGTTCCAGACAGCTTACTTGCTTCTGTGTTTTGGCATAACATGGATCCCAATTGCCGGGGTGCTCTTCCCGTTGTTGATCATGCTTCTAGTCCCAGTGCGGCAGTATTTGCTCCCTAAGTTTTTTAAAAGCGCTCACCTTCAAGACCTGGATGCTGCAGAATACGAGGAAGCCCCTGCCGTTGCTTTCAACATGTCCTTCGAAGATCAGGATGTTCAGGCAAGAATGAATAACATTGATGGTGGGGAGATACTTGATGAAATTATTACAAGAAGCCGCGGGGAGATACGCCGCACTCAGAGTCCAAAAGTATCAAGTTTGACCCCTACTTCTTCACTAGAAGGCATAAAATCAGCTTATAGCCCAAGGTTAACGCAGAGAGTATACAGCCCCGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006873 GO:0006885 GO:0007275 GO:0008150 GO:0009987 GO:0016020 GO:0016021 GO:0019725 GO:0022622 GO:0030003 GO:0030004 GO:0030641 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0042592 GO:0044425 GO:0044459 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HCO3_cotransp

Protein Analysis

580

Amino Acids

65.45

Weight (kDa)

9.16

Isoelectric Point (pI)

40.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HCO3_cotransp	PF00955	20 - 78	9.2e-07	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	101 - 271	2.1e-24	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	359 - 501	9.6e-29	HCO3- transporter integral membrane domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47160 AT2G47160 AT3G62270
fragaria_vesca	FvH4_1g26620 FvH4_1g26620 FvH4_1g26620 FvH4_1g26620 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400
malus_domestica	MD06G1173100.v1.1 MD09G1287700.v1.1 MD14G1179400.v1.1 MD17G1279900.v1.1
prunus_persica	Prupe.3G005600_v2.0.a1 Prupe.5G172600_v2.0.a1
pyrus_communis	pycom06g15420 pycom14g14930 pycom14g14940
rosa_chinensis	RchiOBHm_Chr3g0486761 RchiOBHm_Chr7g0193431
rosa_laevigata	RLG00000004268 RLG00000023062
rosa_multiflora	Rmu_sc0006629.1_g000001 Rmu_sc0012783.1_g000009 Rmu_sc0013001.1_g000011
rosa_roxburghii	Rroxscaffold_3G00262090 Rroxscaffold_6G00395610
rosa_rugosa	Rorug03G0227000 Rorug03G0227100 Rorug07G0009500
rosa_samantha	Rh3AG276900 Rh3BG311800 Rh3CG311000 Rh3DG307500 Rh7AG136100 Rh7BG136500 Rh7CG140000 Rh7DG137800
rosa_wichuraiana	Rw3G024620 Rw7G011610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	498
AccI	GTMKAC	4 cut(s)	5, 859, 936, 1728
AccII	CGCG	1 cut(s)	1623
AciI	CCGC	7 cut(s)	404, 826, 892, 1444, 1621, 1623, 1636
AclWI	GGATC	2 cut(s)	1384, 1397
AcoI	YGGCCR	1 cut(s)	114
AcsI	RAATTY	1 cut(s)	230
AcuI	CTGAAG	1 cut(s)	1094
AfaI	GTAC	1 cut(s)	1003
AfeI	AGCGCT	1 cut(s)	1477
AfiI	CCNNNNNNNGG	5 cut(s)	424, 661, 761, 1231, 1400
AflIII	ACRYGT	2 cut(s)	152, 1536
AgsI	TTSAA	6 cut(s)	19, 1079, 1156, 1208, 1487, 1534
AhlI	ACTAGT	1 cut(s)	931
AjnI	CCWGG	3 cut(s)	517, 1216, 1491
Alw21I	GWGCWC	2 cut(s)	618, 1410
Alw26I	GTCTC	2 cut(s)	519, 1304
AlwI	GGATC	2 cut(s)	1384, 1397
Aor51HI	AGCGCT	1 cut(s)	1477
AoxI	GGCC	3 cut(s)	114, 207, 325
ApeKI	GCWGC	3 cut(s)	202, 1139, 1499
ApoI	RAATTY	1 cut(s)	230
ArsI	GACNNNNNNTTYG	4 cut(s)	82, 114, 497, 529
AspLEI	GCGC	1 cut(s)	1478
AspS9I	GGNCC	1 cut(s)	31
AsuC2I	CCSGG	1 cut(s)	1402
AsuHPI	GGTGA	3 cut(s)	176, 1333, 1472
AsuII	TTCGAA	1 cut(s)	1545
AvaII	GGWCC	1 cut(s)	31
BaeI	ACNNNNGTAYC	2 cut(s)	429, 462
BalI	TGGCCA	1 cut(s)	116
BamHI	GGATCC	1 cut(s)	1389
BbsI	GAAGAC	1 cut(s)	170
Bbv12I	GWGCWC	2 cut(s)	618, 1410
BbvCI	CCTCAGC	1 cut(s)	1097
BbvI	GCAGC	3 cut(s)	214, 1126, 1486
BccI	CCATC	3 cut(s)	69, 955, 1577
BceAI	ACGGC	1 cut(s)	1508
BciT130I	CCWGG	3 cut(s)	519, 1218, 1493
BclI	TGATCA	2 cut(s)	628, 1422
BcnI	CCSGG	1 cut(s)	1402
BcoDI	GTCTC	2 cut(s)	519, 1304
BcuI	ACTAGT	1 cut(s)	931
BfaI	CTAG	4 cut(s)	360, 932, 1433, 1682
BfmI	CTRYAG	1 cut(s)	1500
BfoI	RGCGCY	1 cut(s)	1479
BisI	GCNGC	6 cut(s)	203, 1140, 1445, 1500, 1621, 1636
BlpI	GCTNAGC	1 cut(s)	799
BlsI	GCNGC	6 cut(s)	204, 1141, 1446, 1501, 1622, 1637
BmcAI	AGTACT	1 cut(s)	1003
Bme1390I	CCNGG	4 cut(s)	519, 1218, 1402, 1493
Bme18I	GGWCC	1 cut(s)	31
BmgT120I	GGNCC	1 cut(s)	31
BmiI	GGNNCC	2 cut(s)	1300, 1391
BmrFI	CCNGG	4 cut(s)	519, 1218, 1402, 1493
BmrI	ACTGGG	1 cut(s)	1433
BmsI	GCATC	3 cut(s)	650, 1006, 1486
BmuI	ACTGGG	1 cut(s)	1433
BpiI	GAAGAC	1 cut(s)	170
BpmI	CTGGAG	1 cut(s)	1304
Bpu10I	CCTNAGC	2 cut(s)	27, 1097
Bpu1102I	GCTNAGC	1 cut(s)	799
Bpu14I	TTCGAA	1 cut(s)	1545
BpuEI	CTTGAG	2 cut(s)	982, 1328
BpuMI	CCSGG	1 cut(s)	1402
BsaAI	YACGTR	2 cut(s)	155, 392
BsaI	GGTCTC	1 cut(s)	519
BsaJI	CCNNGG	4 cut(s)	509, 1401, 1621, 1709
BsaXI	ACNNNNNCTCC	2 cut(s)	550, 580
Bsc4I	CCNNNNNNNGG	5 cut(s)	424, 661, 761, 1231, 1400
Bse1I	ACTGG	5 cut(s)	76, 458, 539, 1009, 1439
Bse3DI	GCAATG	4 cut(s)	195, 301, 1108, 1115
BseBI	CCWGG	3 cut(s)	519, 1218, 1493
BseDI	CCNNGG	4 cut(s)	509, 1401, 1621, 1709
BseGI	GGATG	4 cut(s)	80, 92, 1501, 1561
BseLI	CCNNNNNNNGG	5 cut(s)	424, 661, 761, 1231, 1400
BseMI	GCAATG	4 cut(s)	195, 301, 1108, 1115
BseMII	CTCAG	3 cut(s)	1111, 1185, 1655
BseNI	ACTGG	5 cut(s)	76, 458, 539, 1009, 1439
BseRI	GAGGAG	1 cut(s)	231
BseXI	GCAGC	3 cut(s)	214, 1126, 1486
BsgI	GTGCAG	1 cut(s)	252
Bsh1236I	CGCG	1 cut(s)	1623
BshFI	GGCC	3 cut(s)	116, 209, 327
BsiHKAI	GWGCWC	2 cut(s)	618, 1410
BsiSI	CCGG	1 cut(s)	1401
BslFI	GGGAC	5 cut(s)	60, 401, 455, 972, 1421
BslI	CCNNNNNNNGG	5 cut(s)	424, 661, 761, 1231, 1400
BsmAI	GTCTC	2 cut(s)	519, 1304
BsmFI	GGGAC	5 cut(s)	60, 401, 455, 972, 1421
BsmI	GAATGC	1 cut(s)	747
BsnI	GGCC	3 cut(s)	116, 209, 327
Bso31I	GGTCTC	1 cut(s)	519
Bsp119I	TTCGAA	1 cut(s)	1545
Bsp1286I	GDGCHC	2 cut(s)	618, 1410
Bsp143I	GATC	6 cut(s)	362, 628, 1063, 1389, 1422, 1549
Bsp1720I	GCTNAGC	1 cut(s)	799
Bsp19I	CCATGG	1 cut(s)	509
BspACI	CCGC	7 cut(s)	404, 826, 892, 1444, 1621, 1623, 1636
BspANI	GGCC	3 cut(s)	116, 209, 327
BspCNI	CTCAG	3 cut(s)	1110, 1184, 1654
BspFNI	CGCG	1 cut(s)	1623
BspLI	GGNNCC	2 cut(s)	1300, 1391
BspMAI	CTGCAG	1 cut(s)	1504
BspPI	GGATC	2 cut(s)	1384, 1397
BspQI	GCTCTTC	2 cut(s)	110, 1415
BspT104I	TTCGAA	1 cut(s)	1545
BspTNI	GGTCTC	1 cut(s)	519
BsrDI	GCAATG	4 cut(s)	195, 301, 1108, 1115
BsrI	ACTGG	5 cut(s)	76, 458, 539, 1009, 1439
BssECI	CCNNGG	4 cut(s)	509, 1401, 1621, 1709
BssMI	GATC	6 cut(s)	362, 628, 1063, 1389, 1422, 1549
BssNAI	GTATAC	3 cut(s)	6, 860, 1729
BssT1I	CCWWGG	2 cut(s)	509, 1709
Bst1107I	GTATAC	3 cut(s)	6, 860, 1729
Bst2UI	CCWGG	3 cut(s)	519, 1218, 1493
Bst4CI	ACNGT	6 cut(s)	541, 562, 635, 985, 1036, 1315
Bst6I	CTCTTC	2 cut(s)	110, 1415
BstAPI	GCANNNNNTGC	1 cut(s)	1453
BstBAI	YACGTR	2 cut(s)	155, 392
BstBI	TTCGAA	1 cut(s)	1545
BstC8I	GCNNGC	5 cut(s)	114, 130, 207, 1122, 1214
BstDEI	CTNAG	6 cut(s)	27, 799, 1097, 1171, 1461, 1641
BstDSI	CCRYGG	2 cut(s)	509, 1621
BstF5I	GGATG	4 cut(s)	80, 92, 1501, 1561
BstFNI	CGCG	1 cut(s)	1623
BstH2I	RGCGCY	1 cut(s)	1479
BstHHI	GCGC	1 cut(s)	1478
BstKTI	GATC	6 cut(s)	365, 631, 1066, 1392, 1425, 1552
BstMAI	GTCTC	2 cut(s)	519, 1304
BstMBI	GATC	6 cut(s)	362, 628, 1063, 1389, 1422, 1549
BstMWI	GCNNNNNNNGC	6 cut(s)	109, 199, 832, 1121, 1199, 1453
BstNI	CCWGG	3 cut(s)	519, 1218, 1493
BstNSI	RCATGY	2 cut(s)	901, 1540
BstSCI	CCNGG	4 cut(s)	517, 1216, 1400, 1491
BstSFI	CTRYAG	1 cut(s)	1500
BstUI	CGCG	1 cut(s)	1623
BstV1I	GCAGC	3 cut(s)	214, 1126, 1486
BstV2I	GAAGAC	1 cut(s)	170
BstX2I	RGATCY	1 cut(s)	1389
BstXI	CCANNNNNNTGG	1 cut(s)	510
BstYI	RGATCY	1 cut(s)	1389
BstZ17I	GTATAC	3 cut(s)	6, 860, 1729
BsuRI	GGCC	3 cut(s)	116, 209, 327
BtgI	CCRYGG	2 cut(s)	509, 1621
BtsCI	GGATG	4 cut(s)	80, 92, 1501, 1561
BtsI	GCAGTG	1 cut(s)	1254
BtsIMutI	CAGTG	3 cut(s)	640, 1254, 1446
Cac8I	GCNNGC	5 cut(s)	114, 130, 207, 1122, 1214
CfoI	GCGC	1 cut(s)	1478
Cfr13I	GGNCC	1 cut(s)	31
Cfr42I	CCGCGG	1 cut(s)	1624
Csp6I	GTAC	1 cut(s)	1002
CviAII	CATG	6 cut(s)	510, 898, 1295, 1386, 1426, 1537
CviQI	GTAC	1 cut(s)	1002
DdeI	CTNAG	6 cut(s)	27, 799, 1097, 1171, 1461, 1641
DpnI	GATC	6 cut(s)	364, 630, 1065, 1391, 1424, 1551
DpnII	GATC	6 cut(s)	362, 628, 1063, 1389, 1422, 1549
DraI	TTTAAA	2 cut(s)	1324, 1471
DrdI	GACNNNNNNGTC	1 cut(s)	498
DseDI	GACNNNNNNGTC	1 cut(s)	498
EaeI	YGGCCR	1 cut(s)	114
Eam1104I	CTCTTC	2 cut(s)	110, 1415
EarI	CTCTTC	2 cut(s)	110, 1415
Eco130I	CCWWGG	2 cut(s)	509, 1709
Eco31I	GGTCTC	1 cut(s)	519
Eco47I	GGWCC	1 cut(s)	31
Eco47III	AGCGCT	1 cut(s)	1477
Eco57I	CTGAAG	1 cut(s)	1094
EcoRII	CCWGG	3 cut(s)	517, 1216, 1491
EcoT14I	CCWWGG	2 cut(s)	509, 1709
EcoT22I	ATGCAT	1 cut(s)	789
ErhI	CCWWGG	2 cut(s)	509, 1709
FaeI	CATG	6 cut(s)	513, 901, 1298, 1389, 1429, 1540
FaqI	GGGAC	5 cut(s)	60, 401, 455, 972, 1421
FatI	CATG	6 cut(s)	509, 897, 1294, 1385, 1425, 1536
FauI	CCCGC	1 cut(s)	1616
FbaI	TGATCA	2 cut(s)	628, 1422
FblI	GTMKAC	4 cut(s)	5, 859, 936, 1728
Fnu4HI	GCNGC	6 cut(s)	203, 1140, 1445, 1500, 1621, 1636
FokI	GGATG	4 cut(s)	79, 87, 1508, 1568
Fsp4HI	GCNGC	6 cut(s)	203, 1140, 1445, 1500, 1621, 1636
FspBI	CTAG	4 cut(s)	360, 932, 1433, 1682
GlaI	GCGC	1 cut(s)	1477
GluI	GCNGC	6 cut(s)	203, 1140, 1445, 1500, 1621, 1636
GsuI	CTGGAG	1 cut(s)	1304
HaeII	RGCGCY	1 cut(s)	1479
HaeIII	GGCC	3 cut(s)	116, 209, 327
HapII	CCGG	1 cut(s)	1401
HhaI	GCGC	1 cut(s)	1478
Hin1II	CATG	6 cut(s)	513, 901, 1298, 1389, 1429, 1540
Hin6I	GCGC	1 cut(s)	1476
HinP1I	GCGC	1 cut(s)	1476
HincII	GTYRAC	1 cut(s)	1716
HindII	GTYRAC	1 cut(s)	1716
HindIII	AAGCTT	3 cut(s)	796, 833, 1210
HinfI	GANTC	6 cut(s)	414, 480, 880, 925, 977, 1645
HpaI	GTTAAC	1 cut(s)	1716
HpaII	CCGG	1 cut(s)	1401
HphI	GGTGA	3 cut(s)	176, 1333, 1472
Hpy166II	GTNNAC	7 cut(s)	6, 90, 150, 860, 937, 1716, 1729
Hpy188I	TCNGA	3 cut(s)	264, 716, 1644
Hpy188III	TCNNGA	4 cut(s)	1307, 1351, 1487, 1553
Hpy8I	GTNNAC	7 cut(s)	6, 90, 150, 860, 937, 1716, 1729
HpyAV	CCTTC	9 cut(s)	288, 338, 655, 713, 719, 1348, 1493, 1552, 1679
HpyCH4III	ACNGT	6 cut(s)	541, 562, 635, 985, 1036, 1315
HpyCH4IV	ACGT	3 cut(s)	154, 391, 943
HpyF10VI	GCNNNNNNNGC	6 cut(s)	109, 199, 832, 1121, 1199, 1453
HpyF3I	CTNAG	6 cut(s)	27, 799, 1097, 1171, 1461, 1641
HpySE526I	ACGT	3 cut(s)	154, 391, 943
Hsp92II	CATG	6 cut(s)	513, 901, 1298, 1389, 1429, 1540
HspAI	GCGC	1 cut(s)	1476
Ksp22I	TGATCA	2 cut(s)	628, 1422
KspAI	GTTAAC	1 cut(s)	1716
KspI	CCGCGG	1 cut(s)	1624
Kzo9I	GATC	6 cut(s)	362, 628, 1063, 1389, 1422, 1549
LguI	GCTCTTC	2 cut(s)	110, 1415
LmnI	GCTCC	4 cut(s)	137, 584, 1264, 1461
Lsp1109I	GCAGC	3 cut(s)	214, 1126, 1486
LweI	GCATC	3 cut(s)	650, 1006, 1486
MaeI	CTAG	4 cut(s)	360, 932, 1433, 1682
MaeII	ACGT	3 cut(s)	154, 391, 943
MaeIII	GTNAC	1 cut(s)	841
MalI	GATC	6 cut(s)	364, 630, 1065, 1391, 1424, 1551
MboI	GATC	6 cut(s)	362, 628, 1063, 1389, 1422, 1549
MboII	GAAGA	7 cut(s)	97, 170, 1168, 1281, 1402, 1559, 1668
MfeI	CAATTG	3 cut(s)	1203, 1329, 1395
MflI	RGATCY	1 cut(s)	1389
MhlI	GDGCHC	2 cut(s)	618, 1410
MlsI	TGGCCA	1 cut(s)	116
MluNI	TGGCCA	1 cut(s)	116
MlyI	GAGTC	4 cut(s)	423, 889, 919, 1654
MmeI	TCCRAC	1 cut(s)	562
MnlI	CCTC	9 cut(s)	209, 220, 279, 576, 1006, 1106, 1158, 1180, 1504
Mox20I	TGGCCA	1 cut(s)	116
Mph1103I	ATGCAT	1 cut(s)	789
MscI	TGGCCA	1 cut(s)	116
MseI	TTAA	6 cut(s)	462, 669, 1323, 1470, 1715, 1741
Msp20I	TGGCCA	1 cut(s)	116
MspA1I	CMGCKG	1 cut(s)	1623
MspI	CCGG	1 cut(s)	1401
MspR9I	CCNGG	4 cut(s)	519, 1218, 1402, 1493
MunI	CAATTG	3 cut(s)	1203, 1329, 1395
Mva1269I	GAATGC	1 cut(s)	747
MvaI	CCWGG	3 cut(s)	519, 1218, 1493
MvnI	CGCG	1 cut(s)	1623
MwoI	GCNNNNNNNGC	6 cut(s)	109, 199, 832, 1121, 1199, 1453
NciI	CCSGG	1 cut(s)	1402
NcoI	CCATGG	1 cut(s)	509
NdeII	GATC	6 cut(s)	362, 628, 1063, 1389, 1422, 1549
NlaIII	CATG	6 cut(s)	513, 901, 1298, 1389, 1429, 1540
NlaIV	GGNNCC	2 cut(s)	1300, 1391
NsiI	ATGCAT	1 cut(s)	789
NspI	RCATGY	2 cut(s)	901, 1540
NspV	TTCGAA	1 cut(s)	1545
PciI	ACATGT	1 cut(s)	1536
PciSI	GCTCTTC	2 cut(s)	110, 1415
PctI	GAATGC	1 cut(s)	747
PfeI	GAWTC	2 cut(s)	480, 977
PkrI	GCNGC	6 cut(s)	204, 1141, 1446, 1501, 1622, 1637
PleI	GAGTC	4 cut(s)	422, 888, 919, 1653
PpsI	GAGTC	4 cut(s)	422, 888, 919, 1653
Ppu21I	YACGTR	2 cut(s)	155, 392
PscI	ACATGT	1 cut(s)	1536
Psp6I	CCWGG	3 cut(s)	517, 1216, 1491
PspGI	CCWGG	3 cut(s)	517, 1216, 1491
PspN4I	GGNNCC	2 cut(s)	1300, 1391
PspPI	GGNCC	1 cut(s)	31
PstI	CTGCAG	1 cut(s)	1504
PsuI	RGATCY	1 cut(s)	1389
RsaI	GTAC	1 cut(s)	1003
RsaNI	GTAC	1 cut(s)	1002
SacII	CCGCGG	1 cut(s)	1624
SapI	GCTCTTC	2 cut(s)	110, 1415
SaqAI	TTAA	6 cut(s)	462, 669, 1323, 1470, 1715, 1741
SatI	GCNGC	6 cut(s)	203, 1140, 1445, 1500, 1621, 1636
Sau3AI	GATC	6 cut(s)	362, 628, 1063, 1389, 1422, 1549
Sau96I	GGNCC	1 cut(s)	31
ScaI	AGTACT	1 cut(s)	1003
SchI	GAGTC	4 cut(s)	423, 889, 919, 1654
ScrFI	CCNGG	4 cut(s)	519, 1218, 1402, 1493
SduI	GDGCHC	2 cut(s)	618, 1410
SfaNI	GCATC	3 cut(s)	650, 1006, 1486
SfcI	CTRYAG	1 cut(s)	1500
Sfr303I	CCGCGG	1 cut(s)	1624
SfuI	TTCGAA	1 cut(s)	1545
SgrBI	CCGCGG	1 cut(s)	1624
SinI	GGWCC	1 cut(s)	31
SmlI	CTYRAG	2 cut(s)	997, 1307
SmoI	CTYRAG	2 cut(s)	997, 1307
SpeI	ACTAGT	1 cut(s)	931
SsiI	CCGC	7 cut(s)	404, 826, 892, 1444, 1621, 1623, 1636
SspI	AATATT	1 cut(s)	1242
SspMI	CTAG	4 cut(s)	360, 932, 1433, 1682
StyD4I	CCNGG	4 cut(s)	517, 1216, 1400, 1491
StyI	CCWWGG	2 cut(s)	509, 1709
TaaI	ACNGT	6 cut(s)	541, 562, 635, 985, 1036, 1315
TaiI	ACGT	3 cut(s)	157, 394, 946
TaqI	TCGA	2 cut(s)	1267, 1545
TaqII	GACCGA	1 cut(s)	48
TatI	WGTACW	1 cut(s)	1001
TauI	GCSGC	3 cut(s)	1447, 1623, 1638
TfiI	GAWTC	2 cut(s)	480, 977
Tru1I	TTAA	6 cut(s)	462, 669, 1323, 1470, 1715, 1741
Tru9I	TTAA	6 cut(s)	462, 669, 1323, 1470, 1715, 1741
TscAI	CASTG	3 cut(s)	640, 1261, 1446
TseI	GCWGC	3 cut(s)	202, 1139, 1499
TspDTI	ATGAA	5 cut(s)	678, 930, 1044, 1586, 1617
TspRI	CASTG	3 cut(s)	640, 1261, 1446
VpaK11BI	GGWCC	1 cut(s)	31
XapI	RAATTY	1 cut(s)	230
XceI	RCATGY	2 cut(s)	901, 1540
XmiI	GTMKAC	4 cut(s)	5, 859, 936, 1728
XspI	CTAG	4 cut(s)	360, 932, 1433, 1682
ZrmI	AGTACT	1 cut(s)	1003
Zsp2I	ATGCAT	1 cut(s)	789

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.