Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0001955

Physical Location & Seq

Genomic Coordinates Reverse (-)

16743228 .. 16747931

Gene Structure 4704 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00395610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

ATGGAGGAGACATTTGTGCCTTTTCGCGGGATCAAGAATGACCTTAGAGGAAGGTTGATGTGCTACAAGCAAGATTGGACTGGTGGCTTCAGAGCAGGATACAGGATTTTGGCTCCCACCACATACATCTTCTTTGCTTCGGCAATCCCTGTCATTTCATTTGGAGAACAGCTGGAGCGAAGTACTGATGGAGTTTTGACAGCAGTGCAAACCTTGGTATCTACGGCTGTCTGTGGAATCATACACTCCATAGTTGGTGGTCAACCCTTGCTGATATTGGGTGTGGCTGAGCCTACTGTAATCATGTACACCTTTATGTTTAATTTTGCCAAGGAGCAAAAAGACTTGGGTCCAAAGCTGTTTCTAGCATGGACAGGATGGGTATGTGTATGGACAGCAGTGTTGCTGTTCTTATTGGCTATTTTGGGTGCTTGTTCCATTATAAACAGATTCACCCGTGTAGCTGGAGAACTGTTTGGCCTCCTTATTGCTATGCTCTTCATGCAGCAATCCATTAAAGGACTTGTGGAGGAGTTTCGCATACCACAAAGAGAAGATACAAGTTTAGCAGAGTTTCTTCCTTCATGGAGGTTCGCAAATGGGATGTTTGCTTTGGTATTGTCATTTGGCCTTCTTCTCACTGCATTAAAAAGTCGGAAAGCAAGGTCTTGGCGCTATGGCTCTGGTTCGCTTAGAGGCTTCATAGCAGATTATGGAGTGCCACTTATGGTTCTAGTCTGGACTGCTGTATCTTACATACCAACTAGTAGTGTTCCGAAAGGAATCCCACGACGGCTCTTTAGTCCAAATCCATGGTCACCTGGTGCATATGAGAATTGGACTGTCATTAAGCAAATGCTCGATGTTCCGGTCCTTTATATCATTGGAGCTTTCATTCCAGCAACAATGATTGCAGTGCTTTATTATTTCGACCACAGTGTAGCATCCCAACTTGCTCAGCAGAAAGAGTTCAATTTGAGAAAGCCATCTTCTTACCATTATGACTTGCTTCTTTTGGGGTTTCTGACCTTAATGTGTGGTCTAATAGGAATTCCTCCATCAAATGGTGTCATTCCACAGTCACCAATGCATACTAAGAGTTTGGCTACTCTTAAACACCAGTTGCTTCGTAATAAACTTGTAAAAACAGCACGCAAAAGCATGAGAAAGAATGCTAGCTTGGGACAGCTGTATGGAAATATGCAAGAAGCCTATCATCAAATGCAGACTCCTTTGATTTACCAGGGTGCCTCATCTCAGGGACTGAATGAGTTAAAAGAATCAACTATCCAGGCAGCTTCAAGTATGGGAAACTATATTGATGCTCCAGTTGATGATACAGTGTTCGATGTGGAGAAAGAGATTGACGATCTATTACCTGTTGAGGTGAAAGAACAGCGTCTTAGTAACATACTTCAAGCTATACTGGTCGGAGCATGTGTTGCAGCCATGCCTATACTAAAAAAAAGATCCCAACCTCTGTCCTCTGGGGCTACTTTGCCTTCATGGCGATTGAAAGCTTACCCGGTAACCAATTTTGGGAAAGGATCTTACTGCTCTTTACTGCTCCCAGTAGAAGATTCAAGTAAACCTTTAAATCCTCTTTCACTTGCTTCATACATGTATACTTTCCCTTCCTTTTCATTGCTTGACATACATGAATTTTGTCATTTTACCTGTAGAGTCCTCGAGGAGTACCATGCAACTTTTGTAGAAACTGTGCCTTTCAAGACAATTGTGATGTTTACAATTTTCCAAACTGTATACTTGCTTATATGTTTTGGGCTTACATGGGTTCCAATTGCCGGGGTCATGTTTCCATTGATGATCATGCTGTTGGTTCCTGTGAGACAATACTTTCTGCCCAAGTTTTTCAAGGGACCTCATCTTCAGGATTTGGATGCAGCAGAGTATGAAGAGGCTCCAGCTTTACCGTTTAATCTTGCAGCGGAGACAGAGCTGGGAGCTGGAGCTGCCTATGCAGGAGATGCAGAAATACTAGATGAGGCTTTTACCCGAAGCCGAGGTGAGTTCAAGCATGTGAGCAGTCCTAAGATCACAAGTACAACTTCAACACCAGCTAATGCCCCCAAAAGCCTTGAGAGTCCTCGTGTCTCCTTCAGTCCTCGAATAAGTGAGCTAAGAGGAGTGCCAAGTCCTCGTTCTGGCGGAAGAGGGCCGCATAGTCCAAAGACTGGAGAAGCGAAGCCTTCCATTCTGGGAAAGAGTCCTAGTGGTAGCAATACGACATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006873 GO:0006885 GO:0007275 GO:0008150 GO:0009987 GO:0016020 GO:0016021 GO:0019725 GO:0022622 GO:0030003 GO:0030004 GO:0030641 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0042592 GO:0044425 GO:0044459 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HCO3_cotransp

Protein Analysis

751

Amino Acids

82.99

Weight (kDa)

8.97

Isoelectric Point (pI)

43.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HCO3_cotransp	PF00955	7 - 180	1.1e-34	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	200 - 373	1.3e-24	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	568 - 636	3.1e-08	HCO3- transporter integral membrane domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47160 AT2G47160 AT3G62270
fragaria_vesca	FvH4_1g26620 FvH4_1g26620 FvH4_1g26620 FvH4_1g26620 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400
malus_domestica	MD06G1173100.v1.1 MD09G1287700.v1.1 MD14G1179400.v1.1 MD17G1279900.v1.1
prunus_persica	Prupe.3G005600_v2.0.a1 Prupe.5G172600_v2.0.a1
pyrus_communis	pycom06g15420 pycom14g14930 pycom14g14940
rosa_chinensis	RchiOBHm_Chr3g0486761 RchiOBHm_Chr7g0193431
rosa_laevigata	RLG00000004268 RLG00000023062
rosa_multiflora	Rmu_sc0006629.1_g000001 Rmu_sc0012783.1_g000009 Rmu_sc0013001.1_g000011
rosa_roxburghii	Rroxscaffold_3G00262090 Rroxscaffold_6G00395610
rosa_rugosa	Rorug03G0227000 Rorug03G0227100 Rorug07G0009500
rosa_samantha	Rh3AG276900 Rh3BG311800 Rh3CG311000 Rh3DG307500 Rh7AG136100 Rh7BG136500 Rh7CG140000 Rh7DG137800
rosa_wichuraiana	Rw3G024620 Rw7G011610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	443
AbsI	CCTCGAGG	1 cut(s)	1688
AccB1I	GGYRCC	1 cut(s)	1247
AccB7I	CCANNNNNTGG	2 cut(s)	1064, 2195
AccI	GTMKAC	2 cut(s)	1625, 1764
AccII	CGCG	1 cut(s)	27
AciI	CCGC	4 cut(s)	27, 1949, 2169, 2180
AclWI	GGATC	3 cut(s)	38, 1464, 1555
AcsI	RAATTY	2 cut(s)	1050, 1661
AcuI	CTGAAG	3 cut(s)	73, 1874, 2104
AdeI	CACNNNGTG	1 cut(s)	824
AfaI	GTAC	4 cut(s)	184, 308, 1697, 2065
AfiI	CCNNNNNNNGG	6 cut(s)	26, 1064, 1539, 1805, 2165, 2195
AflIII	ACRYGT	1 cut(s)	1620
AgsI	TTSAA	9 cut(s)	973, 1302, 1418, 1516, 1584, 1729, 1876, 2035, 2073
AhlI	ACTAGT	1 cut(s)	764
AjnI	CCWGG	3 cut(s)	820, 1242, 1290
AjuI	GAANNNNNNNTTGG	4 cut(s)	1163, 1195, 2146, 2178
Alw26I	GTCTC	4 cut(s)	2, 1843, 1946, 2119
AlwI	GGATC	3 cut(s)	38, 1464, 1555
AlwNI	CAGNNNCTG	1 cut(s)	1264
Ama87I	CYCGRG	1 cut(s)	1688
AoxI	GGCC	3 cut(s)	478, 628, 2177
ApeKI	GCWGC	6 cut(s)	505, 1295, 1445, 1904, 1946, 1973
ApoI	RAATTY	2 cut(s)	1050, 1661
ArsI	GACNNNNNNTTYG	2 cut(s)	800, 832
Asp700I	GAANNNNTTC	1 cut(s)	968
AspLEI	GCGC	1 cut(s)	675
AspS9I	GGNCC	4 cut(s)	350, 871, 1880, 2177
AsuC2I	CCSGG	2 cut(s)	1526, 1807
AsuHPI	GGTGA	5 cut(s)	445, 810, 1074, 1399, 2039
AsuNHI	GCTAGC	1 cut(s)	1175
AvaI	CYCGRG	1 cut(s)	1688
AvaII	GGWCC	3 cut(s)	350, 871, 1880
BaeI	ACNNNNGTAYC	4 cut(s)	201, 234, 732, 765
BanI	GGYRCC	1 cut(s)	1247
BauI	CACGAG	1 cut(s)	2109
BbvI	GCAGC	6 cut(s)	517, 1307, 1457, 1916, 1958, 1960
BccI	CCATC	4 cut(s)	182, 372, 994, 1066
BceAI	ACGGC	2 cut(s)	240, 809
BciT130I	CCWGG	3 cut(s)	822, 1244, 1292
BciVI	GTATCC	1 cut(s)	92
BclI	TGATCA	1 cut(s)	1827
BcnI	CCSGG	2 cut(s)	1526, 1807
BcoDI	GTCTC	4 cut(s)	2, 1843, 1946, 2119
BcuI	ACTAGT	1 cut(s)	764
BfaI	CTAG	6 cut(s)	365, 734, 765, 1176, 2000, 2232
BfmI	CTRYAG	1 cut(s)	1678
BfoI	RGCGCY	1 cut(s)	676
BfuI	GTATCC	1 cut(s)	92
BglI	GCCNNNNNGGC	1 cut(s)	1507
BisI	GCNGC	7 cut(s)	506, 1296, 1446, 1905, 1947, 1974, 2180
BlpI	GCTNAGC	2 cut(s)	288, 957
BlsI	GCNGC	7 cut(s)	507, 1297, 1447, 1906, 1948, 1975, 2181
BmcAI	AGTACT	1 cut(s)	184
Bme1390I	CCNGG	5 cut(s)	822, 1244, 1292, 1526, 1807
Bme18I	GGWCC	3 cut(s)	350, 871, 1880
BmeT110I	CYCGRG	1 cut(s)	1688
BmgT120I	GGNCC	4 cut(s)	350, 871, 1880, 2177
BmiI	GGNNCC	7 cut(s)	114, 351, 1249, 1797, 1842, 1881, 1923
BmrFI	CCNGG	5 cut(s)	822, 1244, 1292, 1526, 1807
BmrI	ACTGGG	1 cut(s)	1565
BmsI	GCATC	4 cut(s)	953, 1312, 1891, 1978
BmtI	GCTAGC	1 cut(s)	1179
BmuI	ACTGGG	1 cut(s)	1565
BoxI	GACNNNNGTC	1 cut(s)	348
BpmI	CTGGAG	6 cut(s)	194, 486, 1311, 1908, 1989, 2217
Bpu1102I	GCTNAGC	2 cut(s)	288, 957
BpuEI	CTTGAG	1 cut(s)	2120
BpuMI	CCSGG	2 cut(s)	1526, 1807
BsaJI	CCNNGG	6 cut(s)	213, 330, 812, 1243, 1806, 2023
BsaWI	WCCGGW	1 cut(s)	868
BsaXI	ACNNNNNCTCC	2 cut(s)	1425, 1455
Bsc4I	CCNNNNNNNGG	6 cut(s)	26, 1064, 1539, 1805, 2165, 2195
Bse1I	ACTGG	6 cut(s)	85, 1120, 1328, 1431, 1571, 2200
Bse3DI	GCAATG	1 cut(s)	1643
BseBI	CCWGG	3 cut(s)	822, 1244, 1292
BseDI	CCNNGG	6 cut(s)	213, 330, 812, 1243, 1806, 2023
BseGI	GGATG	4 cut(s)	383, 609, 944, 1906
BseLI	CCNNNNNNNGG	6 cut(s)	26, 1064, 1539, 1805, 2165, 2195
BseMI	GCAATG	1 cut(s)	1643
BseMII	CTCAG	3 cut(s)	279, 971, 1271
BseNI	ACTGG	6 cut(s)	85, 1120, 1328, 1431, 1571, 2200
BseRI	GAGGAG	4 cut(s)	20, 545, 1706, 2160
BseXI	GCAGC	6 cut(s)	517, 1307, 1457, 1916, 1958, 1960
BseYI	CCCAGC	1 cut(s)	1960
Bsh1236I	CGCG	1 cut(s)	27
BshFI	GGCC	3 cut(s)	480, 630, 2179
BshNI	GGYRCC	1 cut(s)	1247
BsiHKCI	CYCGRG	1 cut(s)	1688
BsiSI	CCGG	3 cut(s)	869, 1526, 1806
BslFI	GGGAC	3 cut(s)	1197, 1275, 1893
BslI	CCNNNNNNNGG	6 cut(s)	26, 1064, 1539, 1805, 2165, 2195
BsmAI	GTCTC	4 cut(s)	2, 1843, 1946, 2119
BsmFI	GGGAC	3 cut(s)	1197, 1275, 1893
BsmI	GAATGC	1 cut(s)	1177
BsnI	GGCC	3 cut(s)	480, 630, 2179
BsoBI	CYCGRG	1 cut(s)	1688
Bsp1407I	TGTACA	1 cut(s)	306
Bsp143I	GATC	6 cut(s)	30, 1369, 1469, 1547, 1827, 2055
Bsp1720I	GCTNAGC	2 cut(s)	288, 957
Bsp19I	CCATGG	1 cut(s)	812
BspACI	CCGC	4 cut(s)	27, 1949, 2169, 2180
BspANI	GGCC	3 cut(s)	480, 630, 2179
BspCNI	CTCAG	3 cut(s)	280, 970, 1270
BspFNI	CGCG	1 cut(s)	27
BspLI	GGNNCC	7 cut(s)	114, 351, 1249, 1797, 1842, 1881, 1923
BspOI	GCTAGC	1 cut(s)	1179
BspPI	GGATC	3 cut(s)	38, 1464, 1555
BspQI	GCTCTTC	1 cut(s)	503
BspT107I	GGYRCC	1 cut(s)	1247
BsrDI	GCAATG	1 cut(s)	1643
BsrGI	TGTACA	1 cut(s)	306
BsrI	ACTGG	6 cut(s)	85, 1120, 1328, 1431, 1571, 2200
BssECI	CCNNGG	6 cut(s)	213, 330, 812, 1243, 1806, 2023
BssMI	GATC	6 cut(s)	30, 1369, 1469, 1547, 1827, 2055
BssNAI	GTATAC	2 cut(s)	1626, 1765
BssSI	CACGAG	1 cut(s)	2109
BssT1I	CCWWGG	3 cut(s)	213, 330, 812
Bst1107I	GTATAC	2 cut(s)	1626, 1765
Bst2BI	CACGAG	1 cut(s)	2109
Bst2UI	CCWGG	3 cut(s)	822, 1244, 1292
Bst4CI	ACNGT	9 cut(s)	298, 474, 844, 938, 1080, 1342, 1720, 1762, 1935
Bst6I	CTCTTC	3 cut(s)	503, 1911, 2167
BstAPI	GCANNNNNTGC	2 cut(s)	1442, 1988
BstAUI	TGTACA	1 cut(s)	306
BstC8I	GCNNGC	2 cut(s)	1153, 1177
BstDEI	CTNAG	9 cut(s)	44, 288, 692, 957, 1095, 1257, 1403, 2052, 2141
BstDSI	CCRYGG	1 cut(s)	812
BstEII	GGTNACC	2 cut(s)	816, 1528
BstF5I	GGATG	4 cut(s)	383, 609, 944, 1906
BstFNI	CGCG	1 cut(s)	27
BstH2I	RGCGCY	1 cut(s)	676
BstHHI	GCGC	1 cut(s)	675
BstKTI	GATC	6 cut(s)	33, 1372, 1472, 1550, 1830, 2058
BstMAI	GTCTC	4 cut(s)	2, 1843, 1946, 2119
BstMBI	GATC	6 cut(s)	30, 1369, 1469, 1547, 1827, 2055
BstMWI	GCNNNNNNNGC	6 cut(s)	502, 1442, 1507, 1973, 1979, 1988
BstNI	CCWGG	3 cut(s)	822, 1244, 1292
BstNSI	RCATGY	3 cut(s)	1440, 1624, 2042
BstPAI	GACNNNNGTC	1 cut(s)	348
BstPI	GGTNACC	2 cut(s)	816, 1528
BstSCI	CCNGG	5 cut(s)	820, 1242, 1290, 1524, 1805
BstSFI	CTRYAG	1 cut(s)	1678
BstUI	CGCG	1 cut(s)	27
BstV1I	GCAGC	6 cut(s)	517, 1307, 1457, 1916, 1958, 1960
BstX2I	RGATCY	2 cut(s)	1469, 1547
BstXI	CCANNNNNNTGG	1 cut(s)	813
BstYI	RGATCY	2 cut(s)	1469, 1547
BstZ17I	GTATAC	2 cut(s)	1626, 1765
BsuI	GTATCC	1 cut(s)	92
BsuRI	GGCC	3 cut(s)	480, 630, 2179
BtgI	CCRYGG	1 cut(s)	812
BtsCI	GGATG	4 cut(s)	383, 609, 944, 1906
BtsI	GCAGTG	4 cut(s)	210, 405, 639, 921
BtsIMutI	CAGTG	6 cut(s)	210, 405, 639, 921, 943, 1347
Cac8I	GCNNGC	2 cut(s)	1153, 1177
CaiI	CAGNNNCTG	1 cut(s)	1264
CfoI	GCGC	1 cut(s)	675
Cfr13I	GGNCC	4 cut(s)	350, 871, 1880, 2177
CseI	GACGC	1 cut(s)	1388
CsiI	ACCWGGT	1 cut(s)	820
Csp6I	GTAC	4 cut(s)	183, 307, 1696, 2064
CviQI	GTAC	4 cut(s)	183, 307, 1696, 2064
DdeI	CTNAG	9 cut(s)	44, 288, 692, 957, 1095, 1257, 1403, 2052, 2141
DpnI	GATC	6 cut(s)	32, 1371, 1471, 1549, 1829, 2057
DpnII	GATC	6 cut(s)	30, 1369, 1469, 1547, 1827, 2055
DraI	TTTAAA	1 cut(s)	1596
DraIII	CACNNNGTG	1 cut(s)	824
Eam1104I	CTCTTC	3 cut(s)	503, 1911, 2167
EarI	CTCTTC	3 cut(s)	503, 1911, 2167
EciI	GGCGGA	1 cut(s)	2184
Eco130I	CCWWGG	3 cut(s)	213, 330, 812
Eco47I	GGWCC	3 cut(s)	350, 871, 1880
Eco57I	CTGAAG	3 cut(s)	73, 1874, 2104
Eco88I	CYCGRG	1 cut(s)	1688
Eco91I	GGTNACC	2 cut(s)	816, 1528
EcoO109I	RGGNCCY	1 cut(s)	1880
EcoO65I	GGTNACC	2 cut(s)	816, 1528
EcoRI	GAATTC	1 cut(s)	1050
EcoRII	CCWGG	3 cut(s)	820, 1242, 1290
EcoT14I	CCWWGG	3 cut(s)	213, 330, 812
EcoT22I	ATGCAT	1 cut(s)	1092
ErhI	CCWWGG	3 cut(s)	213, 330, 812
FalI	AAGNNNNNCTT	4 cut(s)	1576, 1608, 2053, 2085
FaqI	GGGAC	3 cut(s)	1197, 1275, 1893
FauI	CCCGC	1 cut(s)	20
FauNDI	CATATG	1 cut(s)	829
FbaI	TGATCA	1 cut(s)	1827
FblI	GTMKAC	2 cut(s)	1625, 1764
Fnu4HI	GCNGC	7 cut(s)	506, 1296, 1446, 1905, 1947, 1974, 2180
FokI	GGATG	4 cut(s)	390, 616, 931, 1913
Fsp4HI	GCNGC	7 cut(s)	506, 1296, 1446, 1905, 1947, 1974, 2180
FspBI	CTAG	6 cut(s)	365, 734, 765, 1176, 2000, 2232
GlaI	GCGC	1 cut(s)	674
GluI	GCNGC	7 cut(s)	506, 1296, 1446, 1905, 1947, 1974, 2180
GsaI	CCCAGC	1 cut(s)	1964
GsuI	CTGGAG	6 cut(s)	194, 486, 1311, 1908, 1989, 2217
HaeII	RGCGCY	1 cut(s)	676
HaeIII	GGCC	3 cut(s)	480, 630, 2179
HapII	CCGG	3 cut(s)	869, 1526, 1806
HgaI	GACGC	1 cut(s)	1388
HhaI	GCGC	1 cut(s)	675
Hin6I	GCGC	1 cut(s)	673
HinP1I	GCGC	1 cut(s)	673
HincII	GTYRAC	1 cut(s)	263
HindII	GTYRAC	1 cut(s)	263
HindIII	AAGCTT	1 cut(s)	1518
HinfI	GANTC	9 cut(s)	237, 450, 783, 1228, 1280, 1580, 1683, 2104, 2227
HpaII	CCGG	3 cut(s)	869, 1526, 1806
HphI	GGTGA	5 cut(s)	445, 810, 1074, 1399, 2039
Hpy166II	GTNNAC	6 cut(s)	263, 309, 1589, 1626, 1746, 1765
Hpy188I	TCNGA	5 cut(s)	92, 657, 777, 1026, 1433
Hpy188III	TCNNGA	4 cut(s)	34, 739, 1729, 1892
Hpy8I	GTNNAC	6 cut(s)	263, 309, 1589, 1626, 1746, 1765
Hpy99I	CGWCG	1 cut(s)	795
HpyAV	CCTTC	7 cut(s)	45, 591, 641, 1512, 1644, 2128, 2220
HpyCH4III	ACNGT	9 cut(s)	298, 474, 844, 938, 1080, 1342, 1720, 1762, 1935
HpyF10VI	GCNNNNNNNGC	6 cut(s)	502, 1442, 1507, 1973, 1979, 1988
HpyF3I	CTNAG	9 cut(s)	44, 288, 692, 957, 1095, 1257, 1403, 2052, 2141
HspAI	GCGC	1 cut(s)	673
Ksp22I	TGATCA	1 cut(s)	1827
Kzo9I	GATC	6 cut(s)	30, 1369, 1469, 1547, 1827, 2055
LguI	GCTCTTC	1 cut(s)	503
Lsp1109I	GCAGC	6 cut(s)	517, 1307, 1457, 1916, 1958, 1960
LweI	GCATC	4 cut(s)	953, 1312, 1891, 1978
MabI	ACCWGGT	1 cut(s)	820
MaeI	CTAG	6 cut(s)	365, 734, 765, 1176, 2000, 2232
MaeIII	GTNAC	4 cut(s)	816, 1080, 1406, 1528
MalI	GATC	6 cut(s)	32, 1371, 1471, 1549, 1829, 2057
MboI	GATC	6 cut(s)	30, 1369, 1469, 1547, 1827, 2055
MfeI	CAATTG	2 cut(s)	1734, 1800
MflI	RGATCY	2 cut(s)	1469, 1547
MluCI	AATT	9 cut(s)	322, 835, 973, 1050, 1534, 1661, 1734, 1749, 1800
MlyI	GAGTC	4 cut(s)	1222, 1692, 2113, 2236
MmeI	TCCRAC	2 cut(s)	635, 1411
Mph1103I	ATGCAT	1 cut(s)	1092
MroXI	GAANNNNTTC	1 cut(s)	968
MseI	TTAA	9 cut(s)	321, 516, 647, 849, 1031, 1113, 1274, 1595, 1938
MslI	CAYNNNNRTG	1 cut(s)	314
MspA1I	CMGCKG	3 cut(s)	172, 1189, 1949
MspI	CCGG	3 cut(s)	869, 1526, 1806
MspR9I	CCNGG	5 cut(s)	822, 1244, 1292, 1526, 1807
MunI	CAATTG	2 cut(s)	1734, 1800
Mva1269I	GAATGC	1 cut(s)	1177
MvaI	CCWGG	3 cut(s)	822, 1244, 1292
MvnI	CGCG	1 cut(s)	27
MwoI	GCNNNNNNNGC	6 cut(s)	502, 1442, 1507, 1973, 1979, 1988
NciI	CCSGG	2 cut(s)	1526, 1807
NcoI	CCATGG	1 cut(s)	812
NdeI	CATATG	1 cut(s)	829
NdeII	GATC	6 cut(s)	30, 1369, 1469, 1547, 1827, 2055
NheI	GCTAGC	1 cut(s)	1175
NlaIV	GGNNCC	7 cut(s)	114, 351, 1249, 1797, 1842, 1881, 1923
NmeAIII	GCCGAG	1 cut(s)	2048
NmuCI	GTSAC	2 cut(s)	816, 1080
NsiI	ATGCAT	1 cut(s)	1092
NspI	RCATGY	3 cut(s)	1440, 1624, 2042
PaeR7I	CTCGAG	1 cut(s)	1688
PciI	ACATGT	1 cut(s)	1620
PciSI	GCTCTTC	1 cut(s)	503
PctI	GAATGC	1 cut(s)	1177
PdmI	GAANNNNTTC	1 cut(s)	968
PfeI	GAWTC	5 cut(s)	237, 450, 783, 1280, 1580
PflMI	CCANNNNNTGG	2 cut(s)	1064, 2195
PkrI	GCNGC	7 cut(s)	507, 1297, 1447, 1906, 1948, 1975, 2181
PleI	GAGTC	4 cut(s)	1222, 1691, 2112, 2235
PpsI	GAGTC	4 cut(s)	1222, 1691, 2112, 2235
PpuMI	RGGWCCY	1 cut(s)	1880
PscI	ACATGT	1 cut(s)	1620
PshAI	GACNNNNGTC	1 cut(s)	348
PsiI	TTATAA	1 cut(s)	443
Psp5II	RGGWCCY	1 cut(s)	1880
Psp6I	CCWGG	3 cut(s)	820, 1242, 1290
PspEI	GGTNACC	2 cut(s)	816, 1528
PspFI	CCCAGC	1 cut(s)	1960
PspGI	CCWGG	3 cut(s)	820, 1242, 1290
PspN4I	GGNNCC	7 cut(s)	114, 351, 1249, 1797, 1842, 1881, 1923
PspPI	GGNCC	4 cut(s)	350, 871, 1880, 2177
PspPPI	RGGWCCY	1 cut(s)	1880
PspXI	VCTCGAGB	1 cut(s)	1688
PstNI	CAGNNNCTG	1 cut(s)	1264
PsuI	RGATCY	2 cut(s)	1469, 1547
PvuII	CAGCTG	2 cut(s)	172, 1189
RsaI	GTAC	4 cut(s)	184, 308, 1697, 2065
RsaNI	GTAC	4 cut(s)	183, 307, 1696, 2064
RseI	CAYNNNNRTG	1 cut(s)	314
SapI	GCTCTTC	1 cut(s)	503
SaqAI	TTAA	9 cut(s)	321, 516, 647, 849, 1031, 1113, 1274, 1595, 1938
SatI	GCNGC	7 cut(s)	506, 1296, 1446, 1905, 1947, 1974, 2180
Sau3AI	GATC	6 cut(s)	30, 1369, 1469, 1547, 1827, 2055
Sau96I	GGNCC	4 cut(s)	350, 871, 1880, 2177
ScaI	AGTACT	1 cut(s)	184
SchI	GAGTC	4 cut(s)	1222, 1692, 2113, 2236
ScrFI	CCNGG	5 cut(s)	822, 1244, 1292, 1526, 1807
SexAI	ACCWGGT	1 cut(s)	820
SfaNI	GCATC	4 cut(s)	953, 1312, 1891, 1978
SfcI	CTRYAG	1 cut(s)	1678
Sfr274I	CTCGAG	1 cut(s)	1688
SinI	GGWCC	3 cut(s)	350, 871, 1880
SlaI	CTCGAG	1 cut(s)	1688
SmiMI	CAYNNNNRTG	1 cut(s)	314
SmlI	CTYRAG	2 cut(s)	1688, 2099
SmoI	CTYRAG	2 cut(s)	1688, 2099
SpeI	ACTAGT	1 cut(s)	764
Sse9I	AATT	9 cut(s)	322, 835, 973, 1050, 1534, 1661, 1734, 1749, 1800
SsiI	CCGC	4 cut(s)	27, 1949, 2169, 2180
SspMI	CTAG	6 cut(s)	365, 734, 765, 1176, 2000, 2232
StyD4I	CCNGG	5 cut(s)	820, 1242, 1290, 1524, 1805
StyI	CCWWGG	3 cut(s)	213, 330, 812
TaaI	ACNGT	9 cut(s)	298, 474, 844, 938, 1080, 1342, 1720, 1762, 1935
TaqI	TCGA	5 cut(s)	861, 930, 1347, 1689, 2128
TasI	AATT	9 cut(s)	322, 835, 973, 1050, 1534, 1661, 1734, 1749, 1800
TatI	WGTACW	3 cut(s)	182, 306, 2063
TauI	GCSGC	1 cut(s)	2182
TfiI	GAWTC	5 cut(s)	237, 450, 783, 1280, 1580
Tru1I	TTAA	9 cut(s)	321, 516, 647, 849, 1031, 1113, 1274, 1595, 1938
Tru9I	TTAA	9 cut(s)	321, 516, 647, 849, 1031, 1113, 1274, 1595, 1938
TscAI	CASTG	6 cut(s)	210, 405, 646, 921, 943, 1347
TseFI	GTSAC	2 cut(s)	816, 1080
TseI	GCWGC	6 cut(s)	505, 1295, 1445, 1904, 1946, 1973
Tsp45I	GTSAC	2 cut(s)	816, 1080
TspRI	CASTG	6 cut(s)	210, 405, 646, 921, 943, 1347
Van91I	CCANNNNNTGG	2 cut(s)	1064, 2195
VpaK11BI	GGWCC	3 cut(s)	350, 871, 1880
XapI	RAATTY	2 cut(s)	1050, 1661
XceI	RCATGY	3 cut(s)	1440, 1624, 2042
XhoI	CTCGAG	1 cut(s)	1688
XmiI	GTMKAC	2 cut(s)	1625, 1764
XmnI	GAANNNNTTC	1 cut(s)	968
XspI	CTAG	6 cut(s)	365, 734, 765, 1176, 2000, 2232
ZrmI	AGTACT	1 cut(s)	184
Zsp2I	ATGCAT	1 cut(s)	1092

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.