Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0001955

Physical Location & Seq

Genomic Coordinates Reverse (-)

11651317 .. 11656775

Gene Structure 5459 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG137800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGTTTATATTTACAGATGGAACTTTGACTGCAGTACAGACTCTTGCATCAACTGCAATTTGTGGTGTTATCCATTCAATTGTTGGAGGGCAGCCCCTGCTCATACTAGGGGTGGCTGAACCAACAGTATTGATGTATACATTTATGTTCAACTTTGCTAAGGACCGAAAGGATTTGGGACAGGAACTCTTTTTAGCTTGGACTGGATGGGTATGTGTGTGGACATCCATTTTGCTCTTCTTGCTGGCCATTCTGGGTGCTTGCTCTATAATCAATAGGTTTACGCGTATTGCTGGTGAATTATTTGGTCTTCTTATCGCAATGCTTTTTATGCAGCAGGCCATAAGAGGAGTTGTAGAGGAATTTGGCGTACCTGAAAGAGAAAAGCCAAATCAGACTGCACTCCTACCTTCTTGGAGGTTTGGCAATGGAATGTTTGCATTAGTTCTGTCATTTGGCCTTCTATTTACTGCATTGAGAAGTCGTAAAGCTAGATCGTGGCGTTATGGCACAGGTTGGCTACGTGGATTTATAGCGGATTATGGAGTCCCACTTATGGTTCTTGTATGGACTGCTGTATCTTACATACCGGTTAATGATGTCCCAAAAGGAATCCCAAGACGACTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAACTGGACAGTTATCAAGGAGATGATGACTGTTCCTCCTTTATATATAGTTGGAGCATTTATACCAGCAACTATGATTGCTGTGCTCTACTACTTTGATCATAGTGTTGCATCTCAACTTGCCCAACAGAAGGAGTTTAATCTAAAGAAACCAGCTTCATATCACTATGACCTTCTCCTTCTCGGATTTCTGGTCATATTGTGTGGGCTTATTGGCATTCCCCCTGCCAATGGTGTAATTCCACAATCTCCTATGCATACAAAAAGTTTAGCTACTCTAAAACATCAGCTTTTGCGGAATAAGCTTGTAGTAACAGCAAGGAATAGTATACGCAAAAACTCAACTTTGAGTCAATTATACCACAACATGCAAGAAGCATACAATGAAATGCAGACTCCACTAGTCTACCAACGTCCATCTGCTCTGGGACTAAAAGAGCTGAAAGAATCCACAGTCCAATTAGCCTCAAGTACTGGCTACATTGATGCTCCTGTTGATGAAACCGTTTTTGATGTGGATAAGGATATTGATGATCTTTTACCTATTGAAGTAAAAGAGCAACGCCTCAGCAATTTGCTTCAGGCATTGCTGGCTGGTGGTTGTGTAGCTGCTATGCCTCTTTTGAAGAAAATCCCAACCTCAGTTCTTTGGGGTTATTTTGCTTTTATGGCAATTGAAAGCTTGCCTGGAAACCAATTCTGGGAGAGAATATTGTTTCTTTTCACTGCTCCAAGTCGAAGATACAAGGTGCTGGAGAAGTATCATGGAACCTTTCTTGAGACTGTGCCTTTTAAAACAATTGCGACCTTCACCTTGTTCCAGACAGCTTACTTGCTTCTGTGTTTTGGCATAACATGGATCCCAATTGCCGGGGTGCTCTTCCCGTTGTTGATCATGCTTCTAGTCCCAGTGCGGCAGTATTTGCTCCCTAAGTTTTTTAAAAGAGCTCACCTTCAAGACCTGGATGCTGCAGAATACGAGGAAGCCCCTGCCATTGCTTTCAACATGTCCTTTGAAGATCAGGATGTTCAGGCAAGAATAAATAACATTGATGGTGGGGAGATACTTGATGAAATTATTACAAGAAGCCGCGGGGAGATCCGCCGCACTCAGAGTCCAAAAGTATCAAGTTTGACCCCTACTTCTTCACTAGAAGGTATAAAACCAGCTTATAGCCCAAGGTTAACGCAGAGAGTATACAGCCCCCGTTTAAATGAACTGAGAGGAGAAAGAAGCCCCCGACTAAATGTACAAGGTCACGAAACAGAAAACACTCCCAGCCCCCGTTTGAATGAACTAAGAGGAGAACAAAGCCCCCGAATGCATGGTCAGGGAATCGAAACAGTGCAGACTCCCAGCCCTGGACCATCTGTCCTCGGACAAAGCACTCCTGGTTCTTCAAGCTACAAAACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006873 GO:0006885 GO:0007275 GO:0008150 GO:0009987 GO:0016020 GO:0016021 GO:0019725 GO:0022622 GO:0030003 GO:0030004 GO:0030641 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0042592 GO:0044425 GO:0044459 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HCO3_cotransp

Protein Analysis

692

Amino Acids

77.37

Weight (kDa)

9.03

Isoelectric Point (pI)

45.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HCO3_cotransp	PF00955	5 - 123	9.3e-20	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	145 - 315	2.7e-24	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	403 - 545	7.3e-29	HCO3- transporter integral membrane domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47160 AT2G47160 AT3G62270
fragaria_vesca	FvH4_1g26620 FvH4_1g26620 FvH4_1g26620 FvH4_1g26620 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400
malus_domestica	MD06G1173100.v1.1 MD09G1287700.v1.1 MD14G1179400.v1.1 MD17G1279900.v1.1
prunus_persica	Prupe.3G005600_v2.0.a1 Prupe.5G172600_v2.0.a1
pyrus_communis	pycom06g15420 pycom14g14930 pycom14g14940
rosa_chinensis	RchiOBHm_Chr3g0486761 RchiOBHm_Chr7g0193431
rosa_laevigata	RLG00000004268 RLG00000023062
rosa_multiflora	Rmu_sc0006629.1_g000001 Rmu_sc0012783.1_g000009 Rmu_sc0013001.1_g000011
rosa_roxburghii	Rroxscaffold_3G00262090 Rroxscaffold_6G00395610
rosa_rugosa	Rorug03G0227000 Rorug03G0227100 Rorug07G0009500
rosa_samantha	Rh3AG276900 Rh3BG311800 Rh3CG311000 Rh3DG307500 Rh7AG136100 Rh7BG136500 Rh7CG140000 Rh7DG137800
rosa_wichuraiana	Rw3G024620 Rw7G011610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	630
AccI	GTMKAC	4 cut(s)	137, 991, 1068, 1860
AccII	CGCG	2 cut(s)	286, 1755
AciI	CCGC	7 cut(s)	536, 958, 1576, 1753, 1755, 1765, 1768
AclWI	GGATC	3 cut(s)	1516, 1529, 1756
AcoI	YGGCCR	1 cut(s)	246
AcsI	RAATTY	1 cut(s)	362
AcuI	CTGAAG	1 cut(s)	1226
AfaI	GTAC	4 cut(s)	36, 372, 1135, 1914
AfiI	CCNNNNNNNGG	6 cut(s)	556, 793, 893, 1363, 1532, 2024
AflIII	ACRYGT	2 cut(s)	284, 1668
AgeI	ACCGGT	1 cut(s)	589
AhdI	GACNNNNNGTC	1 cut(s)	2033
AhlI	ACTAGT	1 cut(s)	1063
AjnI	CCWGG	5 cut(s)	649, 1348, 1623, 2023, 2053
Alw21I	GWGCWC	3 cut(s)	750, 1542, 1612
Alw26I	GTCTC	2 cut(s)	651, 1436
AlwI	GGATC	3 cut(s)	1516, 1529, 1756
AlwNI	CAGNNNCTG	1 cut(s)	97
AoxI	GGCC	3 cut(s)	246, 339, 457
ApeKI	GCWGC	4 cut(s)	91, 334, 1271, 1631
ApoI	RAATTY	1 cut(s)	362
ArsI	GACNNNNNNTTYG	6 cut(s)	214, 246, 629, 661, 1975, 2007
AsiGI	ACCGGT	1 cut(s)	589
AspS9I	GGNCC	2 cut(s)	163, 2027
AsuC2I	CCSGG	1 cut(s)	1534
AsuHPI	GGTGA	3 cut(s)	308, 1465, 1604
AvaII	GGWCC	2 cut(s)	163, 2027
BaeI	ACNNNNGTAYC	2 cut(s)	561, 594
BalI	TGGCCA	1 cut(s)	248
BamHI	GGATCC	1 cut(s)	1521
BanII	GRGCYC	1 cut(s)	1612
BbsI	GAAGAC	1 cut(s)	302
Bbv12I	GWGCWC	3 cut(s)	750, 1542, 1612
BbvCI	CCTCAGC	1 cut(s)	1229
BbvI	GCAGC	4 cut(s)	103, 346, 1258, 1618
BccI	CCATC	5 cut(s)	11, 201, 1087, 1709, 2038
BciT130I	CCWGG	5 cut(s)	651, 1350, 1625, 2025, 2055
BclI	TGATCA	2 cut(s)	760, 1554
BcnI	CCSGG	1 cut(s)	1534
BcoDI	GTCTC	2 cut(s)	651, 1436
BcuI	ACTAGT	1 cut(s)	1063
BfaI	CTAG	6 cut(s)	107, 492, 1064, 1565, 1814, 2077
BfmI	CTRYAG	2 cut(s)	30, 1632
BisI	GCNGC	7 cut(s)	92, 335, 1272, 1577, 1632, 1753, 1768
BlsI	GCNGC	7 cut(s)	93, 336, 1273, 1578, 1633, 1754, 1769
BmcAI	AGTACT	1 cut(s)	1135
Bme1390I	CCNGG	6 cut(s)	651, 1350, 1534, 1625, 2025, 2055
Bme18I	GGWCC	2 cut(s)	163, 2027
BmeRI	GACNNNNNGTC	1 cut(s)	2033
BmgT120I	GGNCC	2 cut(s)	163, 2027
BmiI	GGNNCC	2 cut(s)	1432, 1523
BmrFI	CCNGG	6 cut(s)	651, 1350, 1534, 1625, 2025, 2055
BmrI	ACTGGG	1 cut(s)	1565
BmsI	GCATC	4 cut(s)	56, 782, 1138, 1618
BmuI	ACTGGG	1 cut(s)	1565
BpiI	GAAGAC	1 cut(s)	302
BpmI	CTGGAG	1 cut(s)	1436
Bpu10I	CCTNAGC	2 cut(s)	159, 1229
BpuEI	CTTGAG	2 cut(s)	1114, 1460
BpuMI	CCSGG	1 cut(s)	1534
BsaAI	YACGTR	1 cut(s)	524
BsaI	GGTCTC	1 cut(s)	651
BsaJI	CCNNGG	6 cut(s)	641, 1533, 1753, 1841, 2023, 2038
BsaWI	WCCGGW	1 cut(s)	589
BsaXI	ACNNNNNCTCC	2 cut(s)	682, 712
Bsc4I	CCNNNNNNNGG	6 cut(s)	556, 793, 893, 1363, 1532, 2024
Bse118I	RCCGGY	1 cut(s)	589
Bse1I	ACTGG	4 cut(s)	208, 671, 1141, 1571
Bse3DI	GCAATG	4 cut(s)	327, 433, 1247, 1656
BseBI	CCWGG	5 cut(s)	651, 1350, 1625, 2025, 2055
BseDI	CCNNGG	6 cut(s)	641, 1533, 1753, 1841, 2023, 2038
BseGI	GGATG	4 cut(s)	212, 224, 1633, 1693
BseLI	CCNNNNNNNGG	6 cut(s)	556, 793, 893, 1363, 1532, 2024
BseMI	GCAATG	4 cut(s)	327, 433, 1247, 1656
BseMII	CTCAG	4 cut(s)	1243, 1317, 1787, 1874
BseNI	ACTGG	4 cut(s)	208, 671, 1141, 1571
BseRI	GAGGAG	3 cut(s)	363, 1902, 1980
BseXI	GCAGC	4 cut(s)	103, 346, 1258, 1618
BseYI	CCCAGC	2 cut(s)	1940, 2018
BsgI	GTGCAG	2 cut(s)	384, 2030
Bsh1236I	CGCG	2 cut(s)	286, 1755
BshFI	GGCC	3 cut(s)	248, 341, 459
BshTI	ACCGGT	1 cut(s)	589
BsiHKAI	GWGCWC	3 cut(s)	750, 1542, 1612
BsiSI	CCGG	2 cut(s)	590, 1533
BslFI	GGGAC	5 cut(s)	192, 533, 587, 1104, 1553
BslI	CCNNNNNNNGG	6 cut(s)	556, 793, 893, 1363, 1532, 2024
BsmAI	GTCTC	2 cut(s)	651, 1436
BsmFI	GGGAC	5 cut(s)	192, 533, 587, 1104, 1553
BsmI	GAATGC	2 cut(s)	879, 1989
BsnI	GGCC	3 cut(s)	248, 341, 459
Bso31I	GGTCTC	1 cut(s)	651
Bsp1286I	GDGCHC	3 cut(s)	750, 1542, 1612
Bsp1407I	TGTACA	1 cut(s)	1912
Bsp143I	GATC	7 cut(s)	494, 760, 1195, 1521, 1554, 1681, 1761
Bsp19I	CCATGG	1 cut(s)	641
BspACI	CCGC	7 cut(s)	536, 958, 1576, 1753, 1755, 1765, 1768
BspANI	GGCC	3 cut(s)	248, 341, 459
BspCNI	CTCAG	4 cut(s)	1242, 1316, 1786, 1875
BspFNI	CGCG	2 cut(s)	286, 1755
BspLI	GGNNCC	2 cut(s)	1432, 1523
BspMAI	CTGCAG	2 cut(s)	34, 1636
BspPI	GGATC	3 cut(s)	1516, 1529, 1756
BspQI	GCTCTTC	2 cut(s)	242, 1547
BspTNI	GGTCTC	1 cut(s)	651
BsrDI	GCAATG	4 cut(s)	327, 433, 1247, 1656
BsrFI	RCCGGY	1 cut(s)	589
BsrGI	TGTACA	1 cut(s)	1912
BsrI	ACTGG	4 cut(s)	208, 671, 1141, 1571
BssAI	RCCGGY	1 cut(s)	589
BssECI	CCNNGG	6 cut(s)	641, 1533, 1753, 1841, 2023, 2038
BssMI	GATC	7 cut(s)	494, 760, 1195, 1521, 1554, 1681, 1761
BssNAI	GTATAC	3 cut(s)	138, 992, 1861
BssT1I	CCWWGG	2 cut(s)	641, 1841
Bst1107I	GTATAC	3 cut(s)	138, 992, 1861
Bst2UI	CCWGG	5 cut(s)	651, 1350, 1625, 2025, 2055
Bst4CI	ACNGT	7 cut(s)	127, 673, 694, 1117, 1168, 1447, 2008
Bst6I	CTCTTC	2 cut(s)	242, 1547
BstAPI	GCANNNNNTGC	3 cut(s)	53, 97, 1585
BstAUI	TGTACA	1 cut(s)	1912
BstBAI	YACGTR	1 cut(s)	524
BstC8I	GCNNGC	5 cut(s)	246, 262, 339, 1254, 1346
BstDEI	CTNAG	7 cut(s)	159, 1229, 1303, 1593, 1773, 1883, 1961
BstDSI	CCRYGG	2 cut(s)	641, 1753
BstF5I	GGATG	4 cut(s)	212, 224, 1633, 1693
BstFNI	CGCG	2 cut(s)	286, 1755
BstKTI	GATC	7 cut(s)	497, 763, 1198, 1524, 1557, 1684, 1764
BstMAI	GTCTC	2 cut(s)	651, 1436
BstMBI	GATC	7 cut(s)	494, 760, 1195, 1521, 1554, 1681, 1761
BstMWI	GCNNNNNNNGC	8 cut(s)	53, 97, 241, 331, 964, 1253, 1331, 1585
BstNI	CCWGG	5 cut(s)	651, 1350, 1625, 2025, 2055
BstNSI	RCATGY	2 cut(s)	1033, 1672
BstSCI	CCNGG	6 cut(s)	649, 1348, 1532, 1623, 2023, 2053
BstSFI	CTRYAG	2 cut(s)	30, 1632
BstUI	CGCG	2 cut(s)	286, 1755
BstV1I	GCAGC	4 cut(s)	103, 346, 1258, 1618
BstV2I	GAAGAC	1 cut(s)	302
BstX2I	RGATCY	2 cut(s)	1521, 1761
BstXI	CCANNNNNNTGG	1 cut(s)	642
BstYI	RGATCY	2 cut(s)	1521, 1761
BstZ17I	GTATAC	3 cut(s)	138, 992, 1861
BsuRI	GGCC	3 cut(s)	248, 341, 459
BtgI	CCRYGG	2 cut(s)	641, 1753
BtsCI	GGATG	4 cut(s)	212, 224, 1633, 1693
BtsI	GCAGTG	1 cut(s)	1386
BtsIMutI	CAGTG	3 cut(s)	1386, 1578, 2013
Cac8I	GCNNGC	5 cut(s)	246, 262, 339, 1254, 1346
CaiI	CAGNNNCTG	1 cut(s)	97
Cfr10I	RCCGGY	1 cut(s)	589
Cfr13I	GGNCC	2 cut(s)	163, 2027
Cfr42I	CCGCGG	1 cut(s)	1756
Csp6I	GTAC	4 cut(s)	35, 371, 1134, 1913
CspAI	ACCGGT	1 cut(s)	589
CviAII	CATG	7 cut(s)	642, 1030, 1427, 1518, 1558, 1669, 1988
CviQI	GTAC	4 cut(s)	35, 371, 1134, 1913
DdeI	CTNAG	7 cut(s)	159, 1229, 1303, 1593, 1773, 1883, 1961
DpnI	GATC	7 cut(s)	496, 762, 1197, 1523, 1556, 1683, 1763
DpnII	GATC	7 cut(s)	494, 760, 1195, 1521, 1554, 1681, 1761
DraI	TTTAAA	3 cut(s)	1456, 1603, 1875
DrdI	GACNNNNNNGTC	1 cut(s)	630
DriI	GACNNNNNGTC	1 cut(s)	2033
DseDI	GACNNNNNNGTC	1 cut(s)	630
EaeI	YGGCCR	1 cut(s)	246
Eam1104I	CTCTTC	2 cut(s)	242, 1547
Eam1105I	GACNNNNNGTC	1 cut(s)	2033
EarI	CTCTTC	2 cut(s)	242, 1547
EciI	GGCGGA	1 cut(s)	1754
Ecl136II	GAGCTC	1 cut(s)	1610
Eco130I	CCWWGG	2 cut(s)	641, 1841
Eco24I	GRGCYC	1 cut(s)	1612
Eco31I	GGTCTC	1 cut(s)	651
Eco47I	GGWCC	2 cut(s)	163, 2027
Eco53kI	GAGCTC	1 cut(s)	1610
Eco57I	CTGAAG	1 cut(s)	1226
EcoICRI	GAGCTC	1 cut(s)	1610
EcoRII	CCWGG	5 cut(s)	649, 1348, 1623, 2023, 2053
EcoT14I	CCWWGG	2 cut(s)	641, 1841
EcoT22I	ATGCAT	2 cut(s)	921, 1989
EcoT38I	GRGCYC	1 cut(s)	1612
ErhI	CCWWGG	2 cut(s)	641, 1841
FaeI	CATG	7 cut(s)	645, 1033, 1430, 1521, 1561, 1672, 1991
FaqI	GGGAC	5 cut(s)	192, 533, 587, 1104, 1553
FatI	CATG	7 cut(s)	641, 1029, 1426, 1517, 1557, 1668, 1987
FauI	CCCGC	1 cut(s)	1748
FbaI	TGATCA	2 cut(s)	760, 1554
FblI	GTMKAC	4 cut(s)	137, 991, 1068, 1860
Fnu4HI	GCNGC	7 cut(s)	92, 335, 1272, 1577, 1632, 1753, 1768
FokI	GGATG	4 cut(s)	211, 219, 1640, 1700
FriOI	GRGCYC	1 cut(s)	1612
Fsp4HI	GCNGC	7 cut(s)	92, 335, 1272, 1577, 1632, 1753, 1768
FspBI	CTAG	6 cut(s)	107, 492, 1064, 1565, 1814, 2077
GluI	GCNGC	7 cut(s)	92, 335, 1272, 1577, 1632, 1753, 1768
GsaI	CCCAGC	2 cut(s)	1944, 2022
GsuI	CTGGAG	1 cut(s)	1436
HaeIII	GGCC	3 cut(s)	248, 341, 459
HapII	CCGG	2 cut(s)	590, 1533
Hin1II	CATG	7 cut(s)	645, 1033, 1430, 1521, 1561, 1672, 1991
HincII	GTYRAC	1 cut(s)	1848
HindII	GTYRAC	1 cut(s)	1848
HindIII	AAGCTT	2 cut(s)	965, 1342
HinfI	GANTC	9 cut(s)	40, 546, 612, 1012, 1057, 1109, 1777, 1998, 2014
HpaI	GTTAAC	1 cut(s)	1848
HpaII	CCGG	2 cut(s)	590, 1533
HphI	GGTGA	3 cut(s)	308, 1465, 1604
Hpy166II	GTNNAC	7 cut(s)	138, 222, 282, 992, 1069, 1848, 1861
Hpy188I	TCNGA	4 cut(s)	396, 848, 1776, 2042
Hpy188III	TCNNGA	5 cut(s)	1439, 1483, 1619, 1685, 1922
Hpy8I	GTNNAC	7 cut(s)	138, 222, 282, 992, 1069, 1848, 1861
HpyAV	CCTTC	8 cut(s)	420, 470, 787, 845, 851, 1480, 1625, 1811
HpyCH4III	ACNGT	7 cut(s)	127, 673, 694, 1117, 1168, 1447, 2008
HpyCH4IV	ACGT	2 cut(s)	523, 1075
HpyF10VI	GCNNNNNNNGC	8 cut(s)	53, 97, 241, 331, 964, 1253, 1331, 1585
HpyF3I	CTNAG	7 cut(s)	159, 1229, 1303, 1593, 1773, 1883, 1961
HpySE526I	ACGT	2 cut(s)	523, 1075
Hsp92II	CATG	7 cut(s)	645, 1033, 1430, 1521, 1561, 1672, 1991
Ksp22I	TGATCA	2 cut(s)	760, 1554
KspAI	GTTAAC	1 cut(s)	1848
KspI	CCGCGG	1 cut(s)	1756
Kzo9I	GATC	7 cut(s)	494, 760, 1195, 1521, 1554, 1681, 1761
LguI	GCTCTTC	2 cut(s)	242, 1547
LmnI	GCTCC	4 cut(s)	716, 1156, 1396, 1593
Lsp1109I	GCAGC	4 cut(s)	103, 346, 1258, 1618
LweI	GCATC	4 cut(s)	56, 782, 1138, 1618
MaeI	CTAG	6 cut(s)	107, 492, 1064, 1565, 1814, 2077
MaeII	ACGT	2 cut(s)	523, 1075
MaeIII	GTNAC	2 cut(s)	973, 1919
MalI	GATC	7 cut(s)	496, 762, 1197, 1523, 1556, 1683, 1763
MboI	GATC	7 cut(s)	494, 760, 1195, 1521, 1554, 1681, 1761
MboII	GAAGA	8 cut(s)	229, 302, 1300, 1413, 1534, 1691, 1800, 2052
MfeI	CAATTG	4 cut(s)	78, 1335, 1461, 1527
MflI	RGATCY	2 cut(s)	1521, 1761
MhlI	GDGCHC	3 cut(s)	750, 1542, 1612
MlsI	TGGCCA	1 cut(s)	248
MluI	ACGCGT	1 cut(s)	284
MluNI	TGGCCA	1 cut(s)	248
MlyI	GAGTC	6 cut(s)	34, 555, 1021, 1051, 1786, 2008
MmeI	TCCRAC	2 cut(s)	64, 694
Mox20I	TGGCCA	1 cut(s)	248
Mph1103I	ATGCAT	2 cut(s)	921, 1989
MscI	TGGCCA	1 cut(s)	248
MseI	TTAA	6 cut(s)	594, 801, 1455, 1602, 1847, 1874
Msp20I	TGGCCA	1 cut(s)	248
MspA1I	CMGCKG	1 cut(s)	1755
MspI	CCGG	2 cut(s)	590, 1533
MspR9I	CCNGG	6 cut(s)	651, 1350, 1534, 1625, 2025, 2055
MunI	CAATTG	4 cut(s)	78, 1335, 1461, 1527
Mva1269I	GAATGC	2 cut(s)	879, 1989
MvaI	CCWGG	5 cut(s)	651, 1350, 1625, 2025, 2055
MvnI	CGCG	2 cut(s)	286, 1755
MwoI	GCNNNNNNNGC	8 cut(s)	53, 97, 241, 331, 964, 1253, 1331, 1585
NciI	CCSGG	1 cut(s)	1534
NcoI	CCATGG	1 cut(s)	641
NdeII	GATC	7 cut(s)	494, 760, 1195, 1521, 1554, 1681, 1761
NlaIII	CATG	7 cut(s)	645, 1033, 1430, 1521, 1561, 1672, 1991
NlaIV	GGNNCC	2 cut(s)	1432, 1523
NmuCI	GTSAC	1 cut(s)	1919
NsiI	ATGCAT	2 cut(s)	921, 1989
NspI	RCATGY	2 cut(s)	1033, 1672
PciI	ACATGT	1 cut(s)	1668
PciSI	GCTCTTC	2 cut(s)	242, 1547
PctI	GAATGC	2 cut(s)	879, 1989
PfeI	GAWTC	3 cut(s)	612, 1109, 1998
PinAI	ACCGGT	1 cut(s)	589
PkrI	GCNGC	7 cut(s)	93, 336, 1273, 1578, 1633, 1754, 1769
PleI	GAGTC	6 cut(s)	34, 554, 1020, 1051, 1785, 2008
PpsI	GAGTC	6 cut(s)	34, 554, 1020, 1051, 1785, 2008
Ppu21I	YACGTR	1 cut(s)	524
PscI	ACATGT	1 cut(s)	1668
Psp124BI	GAGCTC	1 cut(s)	1612
Psp6I	CCWGG	5 cut(s)	649, 1348, 1623, 2023, 2053
PspFI	CCCAGC	2 cut(s)	1940, 2018
PspGI	CCWGG	5 cut(s)	649, 1348, 1623, 2023, 2053
PspN4I	GGNNCC	2 cut(s)	1432, 1523
PspPI	GGNCC	2 cut(s)	163, 2027
PstI	CTGCAG	2 cut(s)	34, 1636
PstNI	CAGNNNCTG	1 cut(s)	97
PsuI	RGATCY	2 cut(s)	1521, 1761
RsaI	GTAC	4 cut(s)	36, 372, 1135, 1914
RsaNI	GTAC	4 cut(s)	35, 371, 1134, 1913
SacI	GAGCTC	1 cut(s)	1612
SacII	CCGCGG	1 cut(s)	1756
SapI	GCTCTTC	2 cut(s)	242, 1547
SaqAI	TTAA	6 cut(s)	594, 801, 1455, 1602, 1847, 1874
SatI	GCNGC	7 cut(s)	92, 335, 1272, 1577, 1632, 1753, 1768
Sau3AI	GATC	7 cut(s)	494, 760, 1195, 1521, 1554, 1681, 1761
Sau96I	GGNCC	2 cut(s)	163, 2027
ScaI	AGTACT	1 cut(s)	1135
SchI	GAGTC	6 cut(s)	34, 555, 1021, 1051, 1786, 2008
ScrFI	CCNGG	6 cut(s)	651, 1350, 1534, 1625, 2025, 2055
SduI	GDGCHC	3 cut(s)	750, 1542, 1612
SfaNI	GCATC	4 cut(s)	56, 782, 1138, 1618
SfcI	CTRYAG	2 cut(s)	30, 1632
Sfr303I	CCGCGG	1 cut(s)	1756
SgrBI	CCGCGG	1 cut(s)	1756
SinI	GGWCC	2 cut(s)	163, 2027
SmlI	CTYRAG	2 cut(s)	1129, 1439
SmoI	CTYRAG	2 cut(s)	1129, 1439
SpeI	ACTAGT	1 cut(s)	1063
SsiI	CCGC	7 cut(s)	536, 958, 1576, 1753, 1755, 1765, 1768
SspI	AATATT	1 cut(s)	1374
SspMI	CTAG	6 cut(s)	107, 492, 1064, 1565, 1814, 2077
SstI	GAGCTC	1 cut(s)	1612
StyD4I	CCNGG	6 cut(s)	649, 1348, 1532, 1623, 2023, 2053
StyI	CCWWGG	2 cut(s)	641, 1841
TaaI	ACNGT	7 cut(s)	127, 673, 694, 1117, 1168, 1447, 2008
TaiI	ACGT	2 cut(s)	526, 1078
TaqI	TCGA	2 cut(s)	1399, 2001
TaqII	GACCGA	1 cut(s)	180
TatI	WGTACW	3 cut(s)	34, 1133, 1912
TauI	GCSGC	3 cut(s)	1579, 1755, 1770
TfiI	GAWTC	3 cut(s)	612, 1109, 1998
Tru1I	TTAA	6 cut(s)	594, 801, 1455, 1602, 1847, 1874
Tru9I	TTAA	6 cut(s)	594, 801, 1455, 1602, 1847, 1874
TscAI	CASTG	3 cut(s)	1393, 1578, 2013
TseFI	GTSAC	1 cut(s)	1919
TseI	GCWGC	4 cut(s)	91, 334, 1271, 1631
Tsp45I	GTSAC	1 cut(s)	1919
TspDTI	ATGAA	6 cut(s)	810, 1062, 1176, 1749, 1893, 1971
TspRI	CASTG	3 cut(s)	1393, 1578, 2013
VpaK11BI	GGWCC	2 cut(s)	163, 2027
XapI	RAATTY	1 cut(s)	362
XceI	RCATGY	2 cut(s)	1033, 1672
XcmI	CCANNNNNNNNNTGG	1 cut(s)	80
XmiI	GTMKAC	4 cut(s)	137, 991, 1068, 1860
XspI	CTAG	6 cut(s)	107, 492, 1064, 1565, 1814, 2077
ZrmI	AGTACT	1 cut(s)	1135
Zsp2I	ATGCAT	2 cut(s)	921, 1989

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.