Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0001955

Physical Location & Seq

Genomic Coordinates Reverse (-)

31297807 .. 31303270

Gene Structure 5464 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1173100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGGAAGAAACATTTGTTCCCTTTCGCGGGATAAAGAATGACCTCAAGGGGAGACTTCTGTGCTACAAACAGGATTGGACTGGTGGTTTACGCGCGGGAATCAGGATCTTGGCGCCAACAACATACATATTCTTTGCTTCAGCAATTCCAGTTATCTCCTTTGGGGAACAGCTCGAAAGAAATACAAATGGAAGCTTGACTGCTGTACAGACTCTTGCATCCACATCACTTTGTGGCATTATCCACTCAATTGTTGGAGGACAGCCCCTGCTTATACTAGGGGTGGCTGAGCCAACGGTATTGATGTATACATTTATGTTCAACTTTGCTAAGGACCAGAAGGATTTGGGGCAGGAACTCTTCTTAGCCTGGACTGGATGGGTATGTATGTGGACAGCCCTTTTGCTATTCTTGCTGGCGGTTCTGGGTGCGTGCTCTATTATAAATAGGTTTACGCGTGTTGCTGGTGAATTGTTTGGCCTGTTAATTGCAATGCTTTTTATGCAGCAGGCCATAAGGGGACTTGTGGAGGAATTTGGCATACCCGAGAGGGAAAATCTTAATCAGACTGCACTCCAACCTTCTTGGCGGTTTGGCAATGGAATGTTTGCACTAGTTCTGTCATTTGGCCTGCTTTTAACTGCATTGAGAAGCCGTAAAGCTAGATCCTGGTGTTATGGAACAGGTTGGCTACGGGGATTAATTACGGATTATGGAGTTCCATTCATGGTGCTTGTTTGGACTGCTGTATCTTACATACCAGTTAATGATGTCCCTAGAGGAATCCCAAGACGATTGTTCAGTCCAAACCCATGGTCTCCTGGTGCATACTCAAACTGGACAGTTATCAAGGAGATGATGAATGTACCTCCATTATATATAGTTGGAGCATTTATACCAGCAACTATGATCGCTGTGCTCTACTACTTTGATCACAGTGTTGCATCTCAACTTGCCCAACAGAAGGAATTTAATCTAAAGAAACCGGCTTCATATCATTATGACCTTCTTCTTCTGGGTTTTCTGGTCATGTTATGTGGGCTTATTGGCATTCCCCCTTCCAATGGAGTAATCCCACAATCTCCTATGCATACAAAAAGCTTAGCTACTCTAAAACATCAGCTTTTGCGGAATAAGCTTGCATCAACAGCTCGAAATAGTATACGCAAAAATTCGAGTTTGAGTGATTTATACCAGAGCATGAAAAATACATACAACGGAATGCAGACTCCACTAGCCTACCAACTTCCATCTGCTTTGGGACTAAAAGAGCTGAAGGAATCCACAGTCCAATTGGCCTCTAGTGCTGGCTACATTGATGCCCCTGTTGATGAGACTCTTTTTGATGTGGAGAAGGATATTGACGATCTTCTGCCCATTGAAGTAAAAGAGCAACGTCTCAGCAATCTGCTTCAATCATTGATGGCTGGTTGTTGTGTAGCTGCTATGCCTGTTTTGAAGAAAATCCCAACATCAGTTCTTTGGGGTTATTTTGCTTTCATGGCGATCGAAAGCTTGCCTGGAAATCAATTTTGGGAGAGGATATTGTTTCTTTTCACTGCTCCAAGTCGAAGATACAAGGTGCTGGAGAAGAATCATGGAACCTTTCTTGAGATTGTGCCTTTCAAAACAATTGTGGCCTTCACATTGTTCCAGACGGCTTACTTGCTTTTGTGTTTTGGCTTAACATGGATCCCGATTGCTGGGGTGCTATTCCCATTGTTGATCATGCTTCTAGTCCCGGTGCGGCAGTATTTTCTCCCCAAGTTTTTCAAAAGAGCTCACCTTCAAGACCTGGATGCTGCAGAATATGAGGAAGCCCCTTCCATTACTCTCAACCTGTCCCTTGAAGATCTAGATCTTCAATCAAGAACCACCAACATTGACGGTGGGGAGATGCTTGACGAAATTATCACAAGAAGCCGTGGTGAGATCCGCCATACTCACAGTCCAAAAGCATCAAGTTTGACCCCTACTCCTCCAGAAGGTAGCCCGCGGATGTCACAGGTAGTGTTCAGCCCCCGTTTAAATGGACTGAGAGGAGAAAGAAGCCCCCCGACCGAGCGGACAGGGACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006873 GO:0006885 GO:0007275 GO:0008150 GO:0009987 GO:0016020 GO:0016021 GO:0019725 GO:0022622 GO:0030003 GO:0030004 GO:0030641 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0042592 GO:0044425 GO:0044459 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HCO3_cotransp

Protein Analysis

693

Amino Acids

77.3

Weight (kDa)

8.86

Isoelectric Point (pI)

42.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HCO3_cotransp	PF00955	7 - 180	8.2e-35	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	202 - 373	3.1e-23	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	460 - 602	9.7e-29	HCO3- transporter integral membrane domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47160 AT2G47160 AT3G62270
fragaria_vesca	FvH4_1g26620 FvH4_1g26620 FvH4_1g26620 FvH4_1g26620 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400 FvH4_5g05400
malus_domestica	MD06G1173100.v1.1 MD09G1287700.v1.1 MD14G1179400.v1.1 MD17G1279900.v1.1
prunus_persica	Prupe.3G005600_v2.0.a1 Prupe.5G172600_v2.0.a1
pyrus_communis	pycom06g15420 pycom14g14930 pycom14g14940
rosa_chinensis	RchiOBHm_Chr3g0486761 RchiOBHm_Chr7g0193431
rosa_laevigata	RLG00000004268 RLG00000023062
rosa_multiflora	Rmu_sc0006629.1_g000001 Rmu_sc0012783.1_g000009 Rmu_sc0013001.1_g000011
rosa_roxburghii	Rroxscaffold_3G00262090 Rroxscaffold_6G00395610
rosa_rugosa	Rorug03G0227000 Rorug03G0227100 Rorug07G0009500
rosa_samantha	Rh3AG276900 Rh3BG311800 Rh3CG311000 Rh3DG307500 Rh7AG136100 Rh7BG136500 Rh7CG140000 Rh7DG137800
rosa_wichuraiana	Rw3G024620 Rw7G011610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	443
AccB1I	GGYRCC	1 cut(s)	112
AccBSI	CCGCTC	1 cut(s)	2065
AccI	GTMKAC	2 cut(s)	308, 1162
AccII	CGCG	5 cut(s)	27, 93, 95, 457, 1996
AclWI	GGATC	5 cut(s)	113, 660, 1687, 1700, 1927
AcsI	RAATTY	3 cut(s)	533, 968, 1171
AcuI	CTGAAG	2 cut(s)	123, 1295
AcyI	GRCGYC	1 cut(s)	113
AdeI	CACNNNGTG	1 cut(s)	233
AfaI	GTAC	2 cut(s)	207, 867
AfiI	CCNNNNNNNGG	6 cut(s)	26, 27, 964, 1064, 1703, 1985
AflIII	ACRYGT	1 cut(s)	455
AgsI	TTSAA	9 cut(s)	322, 1382, 1415, 1459, 1627, 1774, 1790, 1850, 1865
AhlI	ACTAGT	1 cut(s)	613
AjnI	CCWGG	5 cut(s)	368, 668, 820, 1519, 1794
AjuI	GAANNNNNNNTTGG	2 cut(s)	1516, 1548
Alw21I	GWGCWC	3 cut(s)	437, 921, 1783
Alw26I	GTCTC	4 cut(s)	46, 822, 1328, 1403
AlwI	GGATC	5 cut(s)	113, 660, 1687, 1700, 1927
AlwNI	CAGNNNCTG	1 cut(s)	268
Ama87I	CYCGRG	1 cut(s)	545
AoxI	GGCC	5 cut(s)	478, 510, 628, 1296, 1638
ApeKI	GCWGC	3 cut(s)	505, 1442, 1802
ApoI	RAATTY	3 cut(s)	533, 968, 1171
ArsI	GACNNNNNNTTYG	4 cut(s)	385, 417, 800, 832
AseI	ATTAAT	1 cut(s)	701
AspLEI	GCGC	2 cut(s)	95, 115
AspS9I	GGNCC	1 cut(s)	334
AsuC2I	CCSGG	1 cut(s)	1742
AsuHPI	GGTGA	3 cut(s)	479, 1775, 1940
AvaI	CYCGRG	1 cut(s)	545
AvaII	GGWCC	1 cut(s)	334
BaeI	ACNNNNGTAYC	2 cut(s)	732, 765
BamHI	GGATCC	1 cut(s)	1692
BanI	GGYRCC	1 cut(s)	112
BanII	GRGCYC	1 cut(s)	1783
Bbv12I	GWGCWC	3 cut(s)	437, 921, 1783
BbvI	GCAGC	3 cut(s)	517, 1429, 1789
BccI	CCATC	3 cut(s)	372, 1258, 1417
BceAI	ACGGC	3 cut(s)	639, 1674, 1908
BciT130I	CCWGG	5 cut(s)	370, 670, 822, 1521, 1796
BclI	TGATCA	2 cut(s)	931, 1725
BcnI	CCSGG	1 cut(s)	1742
BcoDI	GTCTC	4 cut(s)	46, 822, 1328, 1403
BcuI	ACTAGT	1 cut(s)	613
BfaI	CTAG	8 cut(s)	278, 614, 663, 777, 1235, 1302, 1736, 1856
BfmI	CTRYAG	1 cut(s)	1803
BfoI	RGCGCY	1 cut(s)	116
BglII	AGATCT	2 cut(s)	1852, 1858
BisI	GCNGC	4 cut(s)	506, 1443, 1748, 1803
BlpI	GCTNAGC	2 cut(s)	288, 1102
BlsI	GCNGC	4 cut(s)	507, 1444, 1749, 1804
Bme1390I	CCNGG	6 cut(s)	370, 670, 822, 1521, 1742, 1796
Bme18I	GGWCC	1 cut(s)	334
BmeT110I	CYCGRG	1 cut(s)	545
BmgT120I	GGNCC	1 cut(s)	334
BmiI	GGNNCC	3 cut(s)	114, 1603, 1694
BmrFI	CCNGG	6 cut(s)	370, 670, 822, 1521, 1742, 1796
BmsI	GCATC	7 cut(s)	227, 953, 1151, 1309, 1789, 1887, 1967
BpmI	CTGGAG	2 cut(s)	1607, 1965
Bpu10I	CCTNAGC	1 cut(s)	330
Bpu1102I	GCTNAGC	2 cut(s)	288, 1102
BpuEI	CTTGAG	2 cut(s)	29, 1631
BpuMI	CCSGG	1 cut(s)	1742
BsaBI	GATNNNNATC	1 cut(s)	1857
BsaHI	GRCGYC	1 cut(s)	113
BsaI	GGTCTC	1 cut(s)	822
BsaJI	CCNNGG	3 cut(s)	812, 1924, 1994
BsaXI	ACNNNNNCTCC	2 cut(s)	1960, 1990
Bsc4I	CCNNNNNNNGG	6 cut(s)	26, 27, 964, 1064, 1703, 1985
Bse118I	RCCGGY	1 cut(s)	985
Bse1I	ACTGG	5 cut(s)	85, 149, 379, 761, 842
Bse3DI	GCAATG	2 cut(s)	498, 604
Bse8I	GATNNNNATC	1 cut(s)	1857
BseBI	CCWGG	5 cut(s)	370, 670, 822, 1521, 1796
BseDI	CCNNGG	3 cut(s)	812, 1924, 1994
BseGI	GGATG	4 cut(s)	218, 383, 1804, 2004
BseJI	GATNNNNATC	1 cut(s)	1857
BseLI	CCNNNNNNNGG	6 cut(s)	26, 27, 964, 1064, 1703, 1985
BseMI	GCAATG	2 cut(s)	498, 604
BseMII	CTCAG	3 cut(s)	279, 1414, 2027
BseNI	ACTGG	5 cut(s)	85, 149, 379, 761, 842
BseRI	GAGGAG	2 cut(s)	1968, 2055
BseXI	GCAGC	3 cut(s)	517, 1429, 1789
BseYI	CCCAGC	1 cut(s)	1703
BsgI	GTGCAG	1 cut(s)	555
Bsh1236I	CGCG	5 cut(s)	27, 93, 95, 457, 1996
Bsh1285I	CGRYCG	2 cut(s)	1509, 2061
BshFI	GGCC	5 cut(s)	480, 512, 630, 1298, 1640
BshNI	GGYRCC	1 cut(s)	112
BsiEI	CGRYCG	2 cut(s)	1509, 2061
BsiHKAI	GWGCWC	3 cut(s)	437, 921, 1783
BsiHKCI	CYCGRG	1 cut(s)	545
BsiSI	CCGG	2 cut(s)	986, 1742
BslFI	GGGAC	5 cut(s)	534, 758, 1275, 1724, 1828
BslI	CCNNNNNNNGG	6 cut(s)	26, 27, 964, 1064, 1703, 1985
BsmAI	GTCTC	4 cut(s)	46, 822, 1328, 1403
BsmBI	CGTCTC	1 cut(s)	1403
BsmFI	GGGAC	5 cut(s)	534, 758, 1275, 1724, 1828
BsmI	GAATGC	2 cut(s)	1050, 1227
BsnI	GGCC	5 cut(s)	480, 512, 630, 1298, 1640
Bso31I	GGTCTC	1 cut(s)	822
BsoBI	CYCGRG	1 cut(s)	545
Bsp1286I	GDGCHC	3 cut(s)	437, 921, 1783
Bsp1407I	TGTACA	1 cut(s)	205
Bsp1720I	GCTNAGC	2 cut(s)	288, 1102
Bsp19I	CCATGG	1 cut(s)	812
BspANI	GGCC	5 cut(s)	480, 512, 630, 1298, 1640
BspCNI	CTCAG	3 cut(s)	280, 1413, 2028
BspFNI	CGCG	5 cut(s)	27, 93, 95, 457, 1996
BspLI	GGNNCC	3 cut(s)	114, 1603, 1694
BspMAI	CTGCAG	1 cut(s)	1807
BspPI	GGATC	5 cut(s)	113, 660, 1687, 1700, 1927
BspT107I	GGYRCC	1 cut(s)	112
BspTNI	GGTCTC	1 cut(s)	822
BsrBI	CCGCTC	1 cut(s)	2065
BsrDI	GCAATG	2 cut(s)	498, 604
BsrFI	RCCGGY	1 cut(s)	985
BsrGI	TGTACA	1 cut(s)	205
BsrI	ACTGG	5 cut(s)	85, 149, 379, 761, 842
BssAI	RCCGGY	1 cut(s)	985
BssECI	CCNNGG	3 cut(s)	812, 1924, 1994
BssNAI	GTATAC	2 cut(s)	309, 1163
BssNI	GRCGYC	1 cut(s)	113
BssT1I	CCWWGG	1 cut(s)	812
Bst1107I	GTATAC	2 cut(s)	309, 1163
Bst2UI	CCWGG	5 cut(s)	370, 670, 822, 1521, 1796
Bst4CI	ACNGT	6 cut(s)	298, 844, 938, 1288, 1889, 1949
Bst6I	CTCTTC	1 cut(s)	365
BstACI	GRCGYC	1 cut(s)	113
BstAUI	TGTACA	1 cut(s)	205
BstC8I	GCNNGC	8 cut(s)	417, 433, 510, 632, 1140, 1309, 1517, 1994
BstDEI	CTNAG	6 cut(s)	288, 330, 364, 1102, 1400, 2036
BstDSI	CCRYGG	3 cut(s)	812, 1924, 1994
BstENI	CCTNNNNNAGG	1 cut(s)	1983
BstF5I	GGATG	4 cut(s)	218, 383, 1804, 2004
BstFNI	CGCG	5 cut(s)	27, 93, 95, 457, 1996
BstH2I	RGCGCY	1 cut(s)	116
BstHHI	GCGC	2 cut(s)	95, 115
BstMAI	GTCTC	4 cut(s)	46, 822, 1328, 1403
BstMCI	CGRYCG	2 cut(s)	1509, 2061
BstMWI	GCNNNNNNNGC	6 cut(s)	412, 502, 1135, 1148, 1304, 1502
BstNI	CCWGG	5 cut(s)	370, 670, 822, 1521, 1796
BstSCI	CCNGG	6 cut(s)	368, 668, 820, 1519, 1740, 1794
BstSFI	CTRYAG	1 cut(s)	1803
BstUI	CGCG	5 cut(s)	27, 93, 95, 457, 1996
BstV1I	GCAGC	3 cut(s)	517, 1429, 1789
BstX2I	RGATCY	6 cut(s)	105, 665, 1692, 1852, 1858, 1932
BstXI	CCANNNNNNTGG	1 cut(s)	813
BstYI	RGATCY	6 cut(s)	105, 665, 1692, 1852, 1858, 1932
BstZ17I	GTATAC	2 cut(s)	309, 1163
BsuRI	GGCC	5 cut(s)	480, 512, 630, 1298, 1640
BtgI	CCRYGG	3 cut(s)	812, 1924, 1994
BtsCI	GGATG	4 cut(s)	218, 383, 1804, 2004
BtsI	GCAGTG	1 cut(s)	1557
BtsIMutI	CAGTG	2 cut(s)	943, 1557
Cac8I	GCNNGC	8 cut(s)	417, 433, 510, 632, 1140, 1309, 1517, 1994
CaiI	CAGNNNCTG	1 cut(s)	268
CfoI	GCGC	2 cut(s)	95, 115
Cfr10I	RCCGGY	1 cut(s)	985
Cfr13I	GGNCC	1 cut(s)	334
Cfr42I	CCGCGG	1 cut(s)	1997
Csp6I	GTAC	2 cut(s)	206, 866
CspCI	CAANNNNNGTGG	2 cut(s)	1864, 1899
CviAII	CATG	8 cut(s)	727, 813, 1030, 1201, 1501, 1598, 1689, 1729
CviQI	GTAC	2 cut(s)	206, 866
DdeI	CTNAG	6 cut(s)	288, 330, 364, 1102, 1400, 2036
DinI	GGCGCC	1 cut(s)	114
DraI	TTTAAA	1 cut(s)	2028
DraIII	CACNNNGTG	1 cut(s)	233
Eam1104I	CTCTTC	1 cut(s)	365
EarI	CTCTTC	1 cut(s)	365
EciI	GGCGGA	1 cut(s)	1925
Ecl136II	GAGCTC	1 cut(s)	1781
Eco130I	CCWWGG	1 cut(s)	812
Eco24I	GRGCYC	1 cut(s)	1783
Eco31I	GGTCTC	1 cut(s)	822
Eco47I	GGWCC	1 cut(s)	334
Eco53kI	GAGCTC	1 cut(s)	1781
Eco57I	CTGAAG	2 cut(s)	123, 1295
Eco88I	CYCGRG	1 cut(s)	545
EcoICRI	GAGCTC	1 cut(s)	1781
EcoNI	CCTNNNNNAGG	1 cut(s)	1983
EcoRII	CCWGG	5 cut(s)	368, 668, 820, 1519, 1794
EcoT14I	CCWWGG	1 cut(s)	812
EcoT22I	ATGCAT	1 cut(s)	1092
EcoT38I	GRGCYC	1 cut(s)	1783
EgeI	GGCGCC	1 cut(s)	114
EheI	GGCGCC	1 cut(s)	114
ErhI	CCWWGG	1 cut(s)	812
Esp3I	CGTCTC	1 cut(s)	1403
FaeI	CATG	8 cut(s)	730, 816, 1033, 1204, 1504, 1601, 1692, 1732
FaqI	GGGAC	5 cut(s)	534, 758, 1275, 1724, 1828
FatI	CATG	8 cut(s)	726, 812, 1029, 1200, 1500, 1597, 1688, 1728
FauI	CCCGC	3 cut(s)	20, 88, 2001
FbaI	TGATCA	2 cut(s)	931, 1725
FblI	GTMKAC	2 cut(s)	308, 1162
Fnu4HI	GCNGC	4 cut(s)	506, 1443, 1748, 1803
FokI	GGATG	4 cut(s)	205, 390, 1811, 2011
FriOI	GRGCYC	1 cut(s)	1783
Fsp4HI	GCNGC	4 cut(s)	506, 1443, 1748, 1803
FspBI	CTAG	8 cut(s)	278, 614, 663, 777, 1235, 1302, 1736, 1856
GlaI	GCGC	2 cut(s)	94, 114
GluI	GCNGC	4 cut(s)	506, 1443, 1748, 1803
GsaI	CCCAGC	1 cut(s)	1707
GsuI	CTGGAG	2 cut(s)	1607, 1965
HaeII	RGCGCY	1 cut(s)	116
HaeIII	GGCC	5 cut(s)	480, 512, 630, 1298, 1640
HapII	CCGG	2 cut(s)	986, 1742
HhaI	GCGC	2 cut(s)	95, 115
Hin1I	GRCGYC	1 cut(s)	113
Hin1II	CATG	8 cut(s)	730, 816, 1033, 1204, 1504, 1601, 1692, 1732
Hin6I	GCGC	2 cut(s)	93, 113
HinP1I	GCGC	2 cut(s)	93, 113
HindIII	AAGCTT	4 cut(s)	193, 1099, 1136, 1513
HinfI	GANTC	7 cut(s)	99, 211, 783, 1228, 1280, 1336, 1594
HpaII	CCGG	2 cut(s)	986, 1742
HphI	GGTGA	3 cut(s)	479, 1775, 1940
Hpy166II	GTNNAC	5 cut(s)	89, 309, 393, 453, 1163
Hpy188I	TCNGA	1 cut(s)	567
Hpy188III	TCNNGA	8 cut(s)	103, 1610, 1654, 1696, 1790, 1856, 1869, 1982
Hpy8I	GTNNAC	5 cut(s)	89, 309, 393, 453, 1163
HpyCH4III	ACNGT	6 cut(s)	298, 844, 938, 1288, 1889, 1949
HpyCH4IV	ACGT	1 cut(s)	1396
HpyF10VI	GCNNNNNNNGC	6 cut(s)	412, 502, 1135, 1148, 1304, 1502
HpyF3I	CTNAG	6 cut(s)	288, 330, 364, 1102, 1400, 2036
HpySE526I	ACGT	1 cut(s)	1396
Hsp92I	GRCGYC	1 cut(s)	113
Hsp92II	CATG	8 cut(s)	730, 816, 1033, 1204, 1504, 1601, 1692, 1732
HspAI	GCGC	2 cut(s)	93, 113
KasI	GGCGCC	1 cut(s)	112
Ksp22I	TGATCA	2 cut(s)	931, 1725
KspI	CCGCGG	1 cut(s)	1997
LmnI	GCTCC	2 cut(s)	887, 1567
Lsp1109I	GCAGC	3 cut(s)	517, 1429, 1789
LweI	GCATC	7 cut(s)	227, 953, 1151, 1309, 1789, 1887, 1967
MaeI	CTAG	8 cut(s)	278, 614, 663, 777, 1235, 1302, 1736, 1856
MaeII	ACGT	1 cut(s)	1396
MaeIII	GTNAC	1 cut(s)	2001
MbiI	CCGCTC	1 cut(s)	2065
MfeI	CAATTG	3 cut(s)	249, 1292, 1632
MflI	RGATCY	6 cut(s)	105, 665, 1692, 1852, 1858, 1932
MhlI	GDGCHC	3 cut(s)	437, 921, 1783
MluI	ACGCGT	1 cut(s)	455
Mly113I	GGCGCC	1 cut(s)	113
MlyI	GAGTC	3 cut(s)	205, 1222, 1330
MmeI	TCCRAC	3 cut(s)	235, 601, 865
Mph1103I	ATGCAT	1 cut(s)	1092
MseI	TTAA	8 cut(s)	485, 561, 638, 701, 765, 972, 1685, 2027
MspA1I	CMGCKG	1 cut(s)	1996
MspI	CCGG	2 cut(s)	986, 1742
MspR9I	CCNGG	6 cut(s)	370, 670, 822, 1521, 1742, 1796
MunI	CAATTG	3 cut(s)	249, 1292, 1632
Mva1269I	GAATGC	2 cut(s)	1050, 1227
MvaI	CCWGG	5 cut(s)	370, 670, 822, 1521, 1796
MvnI	CGCG	5 cut(s)	27, 93, 95, 457, 1996
MwoI	GCNNNNNNNGC	6 cut(s)	412, 502, 1135, 1148, 1304, 1502
NarI	GGCGCC	1 cut(s)	113
NciI	CCSGG	1 cut(s)	1742
NcoI	CCATGG	1 cut(s)	812
NlaIII	CATG	8 cut(s)	730, 816, 1033, 1204, 1504, 1601, 1692, 1732
NlaIV	GGNNCC	3 cut(s)	114, 1603, 1694
NmuCI	GTSAC	1 cut(s)	2001
NsiI	ATGCAT	1 cut(s)	1092
PctI	GAATGC	2 cut(s)	1050, 1227
PfeI	GAWTC	4 cut(s)	99, 783, 1280, 1594
PkrI	GCNGC	4 cut(s)	507, 1444, 1749, 1804
Ple19I	CGATCG	1 cut(s)	1509
PleI	GAGTC	3 cut(s)	205, 1222, 1330
PluTI	GGCGCC	1 cut(s)	116
PpsI	GAGTC	3 cut(s)	205, 1222, 1330
PshBI	ATTAAT	1 cut(s)	701
PsiI	TTATAA	1 cut(s)	443
Psp124BI	GAGCTC	1 cut(s)	1783
Psp6I	CCWGG	5 cut(s)	368, 668, 820, 1519, 1794
PspFI	CCCAGC	1 cut(s)	1703
PspGI	CCWGG	5 cut(s)	368, 668, 820, 1519, 1794
PspN4I	GGNNCC	3 cut(s)	114, 1603, 1694
PspPI	GGNCC	1 cut(s)	334
PstI	CTGCAG	1 cut(s)	1807
PstNI	CAGNNNCTG	1 cut(s)	268
PsuI	RGATCY	6 cut(s)	105, 665, 1692, 1852, 1858, 1932
PvuI	CGATCG	1 cut(s)	1509
RsaI	GTAC	2 cut(s)	207, 867
RsaNI	GTAC	2 cut(s)	206, 866
SacI	GAGCTC	1 cut(s)	1783
SacII	CCGCGG	1 cut(s)	1997
SaqAI	TTAA	8 cut(s)	485, 561, 638, 701, 765, 972, 1685, 2027
SatI	GCNGC	4 cut(s)	506, 1443, 1748, 1803
Sau96I	GGNCC	1 cut(s)	334
SchI	GAGTC	3 cut(s)	205, 1222, 1330
ScrFI	CCNGG	6 cut(s)	370, 670, 822, 1521, 1742, 1796
SduI	GDGCHC	3 cut(s)	437, 921, 1783
SfaNI	GCATC	7 cut(s)	227, 953, 1151, 1309, 1789, 1887, 1967
SfcI	CTRYAG	1 cut(s)	1803
SfoI	GGCGCC	1 cut(s)	114
Sfr303I	CCGCGG	1 cut(s)	1997
SgrBI	CCGCGG	1 cut(s)	1997
SinI	GGWCC	1 cut(s)	334
SmlI	CTYRAG	2 cut(s)	44, 1610
SmoI	CTYRAG	2 cut(s)	44, 1610
SpeI	ACTAGT	1 cut(s)	613
SspDI	GGCGCC	1 cut(s)	112
SspMI	CTAG	8 cut(s)	278, 614, 663, 777, 1235, 1302, 1736, 1856
SstI	GAGCTC	1 cut(s)	1783
StyD4I	CCNGG	6 cut(s)	368, 668, 820, 1519, 1740, 1794
StyI	CCWWGG	1 cut(s)	812
TaaI	ACNGT	6 cut(s)	298, 844, 938, 1288, 1889, 1949
TaiI	ACGT	1 cut(s)	1399
TaqI	TCGA	5 cut(s)	174, 1153, 1175, 1509, 1570
TaqII	GACCGA	1 cut(s)	2075
TatI	WGTACW	1 cut(s)	205
TauI	GCSGC	1 cut(s)	1750
TfiI	GAWTC	4 cut(s)	99, 783, 1280, 1594
Tru1I	TTAA	8 cut(s)	485, 561, 638, 701, 765, 972, 1685, 2027
Tru9I	TTAA	8 cut(s)	485, 561, 638, 701, 765, 972, 1685, 2027
TscAI	CASTG	2 cut(s)	943, 1564
TseFI	GTSAC	1 cut(s)	2001
TseI	GCWGC	3 cut(s)	505, 1442, 1802
Tsp45I	GTSAC	1 cut(s)	2001
TspDTI	ATGAA	5 cut(s)	715, 875, 981, 1217, 1489
TspGWI	ACGGA	2 cut(s)	722, 1233
TspRI	CASTG	2 cut(s)	943, 1564
VpaK11BI	GGWCC	1 cut(s)	334
VspI	ATTAAT	1 cut(s)	701
XagI	CCTNNNNNAGG	1 cut(s)	1983
XapI	RAATTY	3 cut(s)	533, 968, 1171
XbaI	TCTAGA	1 cut(s)	1855
XcmI	CCANNNNNNNNNTGG	2 cut(s)	251, 1291
XmiI	GTMKAC	2 cut(s)	308, 1162
XspI	CTAG	8 cut(s)	278, 614, 663, 777, 1235, 1302, 1736, 1856
Zsp2I	ATGCAT	1 cut(s)	1092

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.