FvH4_1g27850

Belongs to the peptidase M18 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
19421548 .. 19431420
9873 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g27850.t9

Sequence Viewer

Length: 1491 bp
ATGGCAGCGATAACCCTCCTTCAAATCTTCCTCCTCATTCATCACTCGCTTCCCCTCTTCTACCCTCTACTCCCCTCTACTCCCCTCGCCGTCTTCTCAGTCTCTGCTCCAACGCCCAGGTCCTCTCTCTCTTTATCTATCTATCTATCTACATGTGGTCGTAATGTGTCGTATTTGATATCACTGTTGCGTGGTCCCGGCTCAGGTTTCAACTGCGGAAGCCAACGGATCAGTAGTTGGGGATCTACTGGACTACCTCAACGAGTCTTGGACTCACTTTCATGCTACCGGTATAGTGCCGGTAATGGTTTCCATGTGATTGCTGCTCACACAGATAGTCCATGTCTAAAATTAAAACCAAGATCCGCATCAACTAAGTCTGGCTGTCTAATGATAAATGTGCAGACCTATGGAGGTGGTTTGTGGCATACTTGGTTTGATAGAGACCTAAGTGTGGCAGGCAGGGTTATTTTAAGAGAGGGGAATGGTTCTTTTATCCATAAGCTGGTGAAAGTGAAGAGACCTCTTTTACGAATACCTACACTTGCCATTCACCTTGACCGCACAGTGAACAAGGATGGATTCAAACCAAATGTAGAGACTCATCTTATTCCTTTACTAGCATCAAAACTAGAAGAAACAGCATCTTCAGACACAAAAGAGAAAAGTGCAACAATATCTACAAAAGGAGCTCATCATCCATTGCTCATGCAGGCGTTATCAGATGAGATCAATTGTAACGTTGATGACATAGTGAGCATTGAGTTGAATGTCTGTGATACCCAACCAAGCTGCCTTGGAGGTGGGAATAATGAGTTTATCTTTTCAGGAAGACTAGATAATCTTGCCTCAAGTTACTGTGCACTAAGAGCTCTTATTGATTCGTGTAAATCACCTGTTGATTTATCAAGTGAGCATGCTATACGCATGGTTGCTTTATTTGACAATGAAGAGGTGGGTTCAGGATCCATTCAGGGTGCTGGTGCTCCAACTATGTTTCAGGCTATGAGACGCATAATTAGTTGCTTAGCTGAAAAGTACGTTGGTGAAGGTTCCTTTGAGCGTGCAATACGCCAATCATTCCTTGTGTCTGCTGACATGGCTCATGGAGTCCACCCAAATTTTATGGACAAGCATGAAGAATACCATCGACCCGAAATGCAGAAGGGACTTGTTATCAAGCATAATGCAAACCAGCGATATGCTACTAGTGGAGTCACCTCTTTTCTTTTCCAAGAAATAGGCAAAATCCACAACCTTCCAACTCAGGAATTTGTGGTGAGAAACGATATGGGATGTGGGTCGACAATAGGTCCCATACTAGCTTCTGGGGCTGGCATCCGTACTGTTGATTGTGGAATTGCTCAGCTTTCTATGCACAGTGTGAGGGAAATACGTGGGAAGGAAGATATAGACATTGCTCATAAATATTTCAAGGCATTCTACCAAACTTTCTCAAGCATTGACAGAAAGCTAATTGTGGATTCGTGA

Protein Analysis

497

Amino Acids

54.23

Weight (kDa)

8.49

Isoelectric Point (pI)

35.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M18 PF02127 2 - 380 6.9e-130 Aminopeptidase I zinc metalloprotease (M18)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 505
AccI GTMKAC 1 cut(s) 1304
AciI CCGC 3 cut(s) 216, 366, 562
AclI AACGTT 1 cut(s) 741
AclWI GGATC 5 cut(s) 236, 250, 357, 960, 973
AcsI RAATTY 2 cut(s) 1120, 1271
AcuI CTGAAG 1 cut(s) 633
AdeI CACNNNGTG 1 cut(s) 1384
AfaI GTAC 2 cut(s) 1040, 1345
AfiI CCNNNNNNNGG 3 cut(s) 203, 454, 505
AflIII ACRYGT 1 cut(s) 152
AgeI ACCGGT 1 cut(s) 288
AgsI TTSAA 5 cut(s) 23, 211, 586, 769, 1435
AhdI GACNNNNNGTC 1 cut(s) 1311
AhlI ACTAGT 1 cut(s) 1208
AjnI CCWGG 1 cut(s) 116
AjuI GAANNNNNNNTTGG 2 cut(s) 1026, 1058
AluBI AGCT 8 cut(s) 505, 692, 792, 872, 1031, 1325, 1369, 1474
AluI AGCT 8 cut(s) 505, 692, 792, 872, 1031, 1325, 1369, 1474
Alw21I GWGCWC 4 cut(s) 694, 865, 874, 988
Alw26I GTCTC 5 cut(s) 106, 438, 514, 593, 1003
Alw44I GTGCAC 1 cut(s) 861
AlwI GGATC 5 cut(s) 236, 250, 357, 960, 973
AlwNI CAGNNNCTG 1 cut(s) 104
ApaLI GTGCAC 1 cut(s) 861
ApeKI GCWGC 3 cut(s) 5, 323, 792
ApoI RAATTY 2 cut(s) 1120, 1271
AsiGI ACCGGT 1 cut(s) 288
AspS9I GGNCC 3 cut(s) 120, 194, 1313
AsuC2I CCSGG 1 cut(s) 198
AsuHPI GGTGA 6 cut(s) 520, 545, 885, 1058, 1210, 1291
AvaII GGWCC 3 cut(s) 120, 194, 1313
BaeGI GKGCMC 1 cut(s) 865
BamHI GGATCC 1 cut(s) 965
BanII GRGCYC 2 cut(s) 694, 874
BbsI GAAGAC 2 cut(s) 85, 838
Bbv12I GWGCWC 4 cut(s) 694, 865, 874, 988
BbvI GCAGC 3 cut(s) 17, 310, 779
BccI CCATC 2 cut(s) 572, 1155
BceAI ACGGC 1 cut(s) 74
BciT130I CCWGG 1 cut(s) 118
BcnI CCSGG 1 cut(s) 198
BcoDI GTCTC 5 cut(s) 106, 438, 514, 593, 1003
BcuI ACTAGT 1 cut(s) 1208
BfaI CTAG 5 cut(s) 620, 632, 836, 1209, 1322
BisI GCNGC 3 cut(s) 6, 324, 793
BlpI GCTNAGC 2 cut(s) 1027, 1365
BlsI GCNGC 3 cut(s) 7, 325, 794
Bme1390I CCNGG 2 cut(s) 118, 198
Bme18I GGWCC 3 cut(s) 120, 194, 1313
BmeRI GACNNNNNGTC 1 cut(s) 1311
BmgT120I GGNCC 3 cut(s) 120, 194, 1313
BmiI GGNNCC 4 cut(s) 196, 967, 1054, 1315
BmrFI CCNGG 2 cut(s) 118, 198
BmsI GCATC 4 cut(s) 377, 632, 653, 1347
BpiI GAAGAC 2 cut(s) 85, 838
Bpu10I CCTNAGC 1 cut(s) 202
Bpu1102I GCTNAGC 2 cut(s) 1027, 1365
BpuEI CTTGAG 2 cut(s) 835, 1441
BpuMI CCSGG 1 cut(s) 198
BsaAI YACGTR 1 cut(s) 1397
BsaBI GATNNNNATC 1 cut(s) 367
BsaI GGTCTC 2 cut(s) 438, 514
BsaJI CCNNGG 2 cut(s) 116, 796
BsaWI WCCGGW 1 cut(s) 288
Bsc4I CCNNNNNNNGG 3 cut(s) 203, 454, 505
Bse118I RCCGGY 2 cut(s) 288, 299
Bse1I ACTGG 1 cut(s) 253
Bse3DI GCAATG 2 cut(s) 701, 1416
Bse8I GATNNNNATC 1 cut(s) 367
BseBI CCWGG 1 cut(s) 118
BseDI CCNNGG 2 cut(s) 116, 796
BseGI GGATG 4 cut(s) 583, 697, 1301, 1338
BseJI GATNNNNATC 1 cut(s) 367
BseLI CCNNNNNNNGG 3 cut(s) 203, 454, 505
BseMI GCAATG 2 cut(s) 701, 1416
BseMII CTCAG 4 cut(s) 111, 216, 1280, 1379
BseNI ACTGG 1 cut(s) 253
BseRI GAGGAG 1 cut(s) 23
BseSI GKGCMC 1 cut(s) 865
BseXI GCAGC 3 cut(s) 17, 310, 779
BsgI GTGCAG 1 cut(s) 422
BshTI ACCGGT 1 cut(s) 288
BsiHKAI GWGCWC 4 cut(s) 694, 865, 874, 988
BsiSI CCGG 3 cut(s) 198, 289, 300
BslFI GGGAC 3 cut(s) 180, 1182, 1299
BslI CCNNNNNNNGG 3 cut(s) 203, 454, 505
BsmAI GTCTC 5 cut(s) 106, 438, 514, 593, 1003
BsmBI CGTCTC 1 cut(s) 1003
BsmFI GGGAC 3 cut(s) 180, 1182, 1299
BsmI GAATGC 1 cut(s) 1439
Bso31I GGTCTC 2 cut(s) 438, 514
Bsp1286I GDGCHC 4 cut(s) 694, 865, 874, 988
Bsp143I GATC 5 cut(s) 228, 242, 362, 729, 965
Bsp1720I GCTNAGC 2 cut(s) 1027, 1365
BspACI CCGC 3 cut(s) 216, 366, 562
BspCNI CTCAG 4 cut(s) 110, 215, 1279, 1378
BspLI GGNNCC 4 cut(s) 196, 967, 1054, 1315
BspPI GGATC 5 cut(s) 236, 250, 357, 960, 973
BspTNI GGTCTC 2 cut(s) 438, 514
BsrDI GCAATG 2 cut(s) 701, 1416
BsrFI RCCGGY 2 cut(s) 288, 299
BsrI ACTGG 1 cut(s) 253
BssAI RCCGGY 2 cut(s) 288, 299
BssECI CCNNGG 2 cut(s) 116, 796
BssMI GATC 5 cut(s) 228, 242, 362, 729, 965
BssT1I CCWWGG 1 cut(s) 796
Bst2UI CCWGG 1 cut(s) 118
Bst4CI ACNGT 5 cut(s) 186, 568, 860, 1348, 1382
Bst6I CTCTTC 3 cut(s) 62, 512, 945
BstBAI YACGTR 1 cut(s) 1397
BstC8I GCNNGC 5 cut(s) 460, 714, 918, 1065, 1336
BstDEI CTNAG 8 cut(s) 97, 202, 375, 449, 866, 1027, 1266, 1365
BstF5I GGATG 4 cut(s) 583, 697, 1301, 1338
BstKTI GATC 5 cut(s) 231, 245, 365, 732, 968
BstMAI GTCTC 5 cut(s) 106, 438, 514, 593, 1003
BstMBI GATC 5 cut(s) 228, 242, 362, 729, 965
BstMWI GCNNNNNNNGC 4 cut(s) 869, 1100, 1331, 1375
BstNI CCWGG 1 cut(s) 118
BstNSI RCATGY 2 cut(s) 156, 920
BstSCI CCNGG 2 cut(s) 116, 196
BstSLI GKGCMC 1 cut(s) 865
BstV1I GCAGC 3 cut(s) 17, 310, 779
BstV2I GAAGAC 2 cut(s) 85, 838
BstX2I RGATCY 3 cut(s) 242, 362, 965
BstYI RGATCY 3 cut(s) 242, 362, 965
BtsCI GGATG 4 cut(s) 583, 697, 1301, 1338
BtsIMutI CAGTG 3 cut(s) 182, 573, 1387
Cac8I GCNNGC 5 cut(s) 460, 714, 918, 1065, 1336
CaiI CAGNNNCTG 1 cut(s) 104
Cfr10I RCCGGY 2 cut(s) 288, 299
Cfr13I GGNCC 3 cut(s) 120, 194, 1313
CseI GACGC 1 cut(s) 1020
Csp6I GTAC 2 cut(s) 1039, 1344
CspAI ACCGGT 1 cut(s) 288
CviQI GTAC 2 cut(s) 1039, 1344
DdeI CTNAG 8 cut(s) 97, 202, 375, 449, 866, 1027, 1266, 1365
DpnI GATC 5 cut(s) 230, 244, 364, 731, 967
DpnII GATC 5 cut(s) 228, 242, 362, 729, 965
DraIII CACNNNGTG 1 cut(s) 1384
DriI GACNNNNNGTC 1 cut(s) 1311
Eam1104I CTCTTC 3 cut(s) 62, 512, 945
Eam1105I GACNNNNNGTC 1 cut(s) 1311
EarI CTCTTC 3 cut(s) 62, 512, 945
Ecl136II GAGCTC 2 cut(s) 692, 872
Eco130I CCWWGG 1 cut(s) 796
Eco24I GRGCYC 2 cut(s) 694, 874
Eco31I GGTCTC 2 cut(s) 438, 514
Eco32I GATATC 1 cut(s) 180
Eco47I GGWCC 3 cut(s) 120, 194, 1313
Eco53kI GAGCTC 2 cut(s) 692, 872
Eco57I CTGAAG 1 cut(s) 633
EcoICRI GAGCTC 2 cut(s) 692, 872
EcoO109I RGGNCCY 2 cut(s) 120, 1313
EcoRII CCWGG 1 cut(s) 116
EcoRV GATATC 1 cut(s) 180
EcoT14I CCWWGG 1 cut(s) 796
EcoT38I GRGCYC 2 cut(s) 694, 874
ErhI CCWWGG 1 cut(s) 796
Esp3I CGTCTC 1 cut(s) 1003
FaqI GGGAC 3 cut(s) 180, 1182, 1299
FblI GTMKAC 1 cut(s) 1304
Fnu4HI GCNGC 3 cut(s) 6, 324, 793
FokI GGATG 4 cut(s) 590, 684, 1308, 1325
FriOI GRGCYC 2 cut(s) 694, 874
Fsp4HI GCNGC 3 cut(s) 6, 324, 793
FspBI CTAG 5 cut(s) 620, 632, 836, 1209, 1322
GluI GCNGC 3 cut(s) 6, 324, 793
HapII CCGG 3 cut(s) 198, 289, 300
HgaI GACGC 1 cut(s) 1020
HincII GTYRAC 1 cut(s) 1305
HindII GTYRAC 1 cut(s) 1305
HinfI GANTC 8 cut(s) 264, 272, 582, 601, 881, 1110, 1215, 1484
HpaII CCGG 3 cut(s) 198, 289, 300
HphI GGTGA 6 cut(s) 520, 545, 885, 1058, 1210, 1291
Hpy166II GTNNAC 4 cut(s) 571, 863, 1114, 1305
Hpy188I TCNGA 2 cut(s) 652, 724
Hpy188III TCNNGA 4 cut(s) 828, 963, 1268, 1488
Hpy8I GTNNAC 4 cut(s) 571, 863, 1114, 1305
HpyAV CCTTC 5 cut(s) 29, 1043, 1159, 1268, 1396
HpyCH4III ACNGT 5 cut(s) 186, 568, 860, 1348, 1382
HpyCH4IV ACGT 3 cut(s) 741, 1041, 1396
HpyCH4V TGCA 8 cut(s) 403, 671, 712, 863, 1067, 1162, 1190, 1378
HpyF10VI GCNNNNNNNGC 4 cut(s) 869, 1100, 1331, 1375
HpyF3I CTNAG 8 cut(s) 97, 202, 375, 449, 866, 1027, 1266, 1365
HpySE526I ACGT 3 cut(s) 741, 1041, 1396
Kzo9I GATC 5 cut(s) 228, 242, 362, 729, 965
LmnI GCTCC 3 cut(s) 112, 689, 991
Lsp1109I GCAGC 3 cut(s) 17, 310, 779
LweI GCATC 4 cut(s) 377, 632, 653, 1347
MaeI CTAG 5 cut(s) 620, 632, 836, 1209, 1322
MaeII ACGT 3 cut(s) 741, 1041, 1396
MaeIII GTNAC 3 cut(s) 737, 854, 1216
MalI GATC 5 cut(s) 230, 244, 364, 731, 967
MboI GATC 5 cut(s) 228, 242, 362, 729, 965
MfeI CAATTG 1 cut(s) 733
MflI RGATCY 3 cut(s) 242, 362, 965
MhlI GDGCHC 4 cut(s) 694, 865, 874, 988
MluCI AATT 7 cut(s) 350, 733, 1017, 1120, 1271, 1359, 1476
MlyI GAGTC 5 cut(s) 266, 273, 595, 1119, 1224
MmeI TCCRAC 3 cut(s) 134, 1013, 1286
MseI TTAA 2 cut(s) 353, 473
MslI CAYNNNNRTG 1 cut(s) 280
MspI CCGG 3 cut(s) 198, 289, 300
MspR9I CCNGG 2 cut(s) 118, 198
MunI CAATTG 1 cut(s) 733
Mva1269I GAATGC 1 cut(s) 1439
MvaI CCWGG 1 cut(s) 118
MwoI GCNNNNNNNGC 4 cut(s) 869, 1100, 1331, 1375
NciI CCSGG 1 cut(s) 198
NdeII GATC 5 cut(s) 228, 242, 362, 729, 965
NlaIV GGNNCC 4 cut(s) 196, 967, 1054, 1315
NmuCI GTSAC 1 cut(s) 1216
NspI RCATGY 2 cut(s) 156, 920
PaeI GCATGC 1 cut(s) 920
PciI ACATGT 1 cut(s) 152
PctI GAATGC 1 cut(s) 1439
PfeI GAWTC 3 cut(s) 582, 881, 1484
PflMI CCANNNNNTGG 1 cut(s) 505
PinAI ACCGGT 1 cut(s) 288
PkrI GCNGC 3 cut(s) 7, 325, 794
PleI GAGTC 5 cut(s) 266, 272, 595, 1118, 1223
PpsI GAGTC 5 cut(s) 266, 272, 595, 1118, 1223
Ppu21I YACGTR 1 cut(s) 1397
PpuMI RGGWCCY 2 cut(s) 120, 1313
PscI ACATGT 1 cut(s) 152
Psp124BI GAGCTC 2 cut(s) 694, 874
Psp1406I AACGTT 1 cut(s) 741
Psp5II RGGWCCY 2 cut(s) 120, 1313
Psp6I CCWGG 1 cut(s) 116
PspGI CCWGG 1 cut(s) 116
PspN4I GGNNCC 4 cut(s) 196, 967, 1054, 1315
PspPI GGNCC 3 cut(s) 120, 194, 1313
PspPPI RGGWCCY 2 cut(s) 120, 1313
PstNI CAGNNNCTG 1 cut(s) 104
PsuI RGATCY 3 cut(s) 242, 362, 965
RsaI GTAC 2 cut(s) 1040, 1345
RsaNI GTAC 2 cut(s) 1039, 1344
RseI CAYNNNNRTG 1 cut(s) 280
SacI GAGCTC 2 cut(s) 694, 874
SalI GTCGAC 1 cut(s) 1303
SaqAI TTAA 2 cut(s) 353, 473
SatI GCNGC 3 cut(s) 6, 324, 793
Sau3AI GATC 5 cut(s) 228, 242, 362, 729, 965
Sau96I GGNCC 3 cut(s) 120, 194, 1313
SchI GAGTC 5 cut(s) 266, 273, 595, 1119, 1224
ScrFI CCNGG 2 cut(s) 118, 198
SduI GDGCHC 4 cut(s) 694, 865, 874, 988
SfaNI GCATC 4 cut(s) 377, 632, 653, 1347
SinI GGWCC 3 cut(s) 120, 194, 1313
SmiMI CAYNNNNRTG 1 cut(s) 280
SmlI CTYRAG 2 cut(s) 850, 1456
SmoI CTYRAG 2 cut(s) 850, 1456
SpeI ACTAGT 1 cut(s) 1208
SphI GCATGC 1 cut(s) 920
Sse9I AATT 7 cut(s) 350, 733, 1017, 1120, 1271, 1359, 1476
SsiI CCGC 3 cut(s) 216, 366, 562
SspI AATATT 1 cut(s) 1430
SspMI CTAG 5 cut(s) 620, 632, 836, 1209, 1322
SstI GAGCTC 2 cut(s) 694, 874
StyD4I CCNGG 2 cut(s) 116, 196
StyI CCWWGG 1 cut(s) 796
TaaI ACNGT 5 cut(s) 186, 568, 860, 1348, 1382
TaiI ACGT 3 cut(s) 744, 1044, 1399
TaqI TCGA 2 cut(s) 1150, 1304
TasI AATT 7 cut(s) 350, 733, 1017, 1120, 1271, 1359, 1476
TfiI GAWTC 3 cut(s) 582, 881, 1484
Tru1I TTAA 2 cut(s) 353, 473
Tru9I TTAA 2 cut(s) 353, 473
TscAI CASTG 3 cut(s) 189, 573, 1387
TseFI GTSAC 1 cut(s) 1216
TseI GCWGC 3 cut(s) 5, 323, 792
Tsp45I GTSAC 1 cut(s) 1216
TspDTI ATGAA 4 cut(s) 29, 270, 963, 1152
TspGWI ACGGA 2 cut(s) 241, 1331
TspRI CASTG 3 cut(s) 189, 573, 1387
Van91I CCANNNNNTGG 1 cut(s) 505
VneI GTGCAC 1 cut(s) 861
VpaK11BI GGWCC 3 cut(s) 120, 194, 1313
XapI RAATTY 2 cut(s) 1120, 1271
XceI RCATGY 2 cut(s) 156, 920
XmiI GTMKAC 1 cut(s) 1304
XspI CTAG 5 cut(s) 620, 632, 836, 1209, 1322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.